RchiOBHm_Chr2g0113761

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
25893844 .. 25896817
2974 bp
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UTR
Exon/CDS
Intron
PRQ48707

Sequence Viewer

Length: 2442 bp
ATGAATATTGGTCACTTAACCCGGATAAAAACGATTGATAATAGCTCGAACTATTTGATAGGTAGAATATCCAGAGAAATCGGAAACCTAACAATGTTGAAGGAGATCGAGCTTGGTAGTAATAATTTTGAAGGTCCTATACCATATGAGATTGGTTATCTTCCTAATTTAGAGAAATTGTGGCTTGGTCAAAATAATCTAAACGGCCATATCCCATCCTCAATCTTCAATATGTCCACAATAACAGGATTATATCTCGGCCTCAATCAGCTTTCAGGCAGCCTCCCAGCAGACATAGGCCTTGCGCTTCCAAAACTAGAAAAGTTTGGAGTAGGAATGAATCTCCTCAGTGGAGTAATCCCCAAATCCATCTCCAATGCTTCTAAGCTTCGGATTCTAGACCTGGGAAGTAACTCTTTTTCTGGATTTATTCCAAGCACTCTGTGCCTCTTGACAAACCTTGAAGTGCTCAGTTTCCGCATCAATAATTTGACCATTGATACCTCTACTCCAGAAGTTAATATTTTTTCTTGTCTGCCAAATCTTAGAAATTTGAGGATTTTAGCCTTCTCAGGCAATCCATTAAATACCGAGCTTTCGATTTCCTTCAGTAATTTCTCTGCATCACTTCAAAATCTTTATTTAGCAAATTGCAGCTTGAGAGGTAACATCCCCAGTGATATTGGGAATTTGAGTAGCTTGATAGTTTTAGGCCTTCAATTCAATCAACTGAGTGGGCCAATTCCAAGCTCAATGGGAAGACTACATAATCTTCAAGGCGTGAGTATGTTTGATAACACATTGCAAGGATACATTCTAGATGAGCTTTGTCAACTAGAAAAGTTATTTGGATTGTACTTGGGTGGGAATCAACTCTCTGGTTCTGTACCTTCCTGCATGGGTAATCTAACAGCATCTCTAAGACTTCTATACTTGGAGTCCAATTTGTTGAATTCCACAATACCATCTGCCTTGTGGGGACTTACAGATATCTTGGAACTAGACTTGTCATCCAATTCTCTAATTGGACCTCTATCAGGTGGTGTTGGTAATTTGAAAGTTGCTACATACATAGATGTATCATACAACCAATTATTTGGGAGTGTACCAAGTAGCATTGGGAGTTTAGTGAGTTTGGTAAGTCTGTCCTTAGCACATAACAATCTAGAAGGCCCTATTCCTAGTTCCTTTGCCACATGCTTAGGCTTAGAAAAATTGGATTTATCTGGAAATAGTTTCACTGGAGTGATTCCAAAGTCTCTAGAAGCACTCTCATATCTCAAGCATCTGAATTTGTCTTTCAACAAACTCCAAGGAGAAATTCCAAGCGGCGGTCCTTTCAAAAACTTCTCTGCTGAATCATTTGTTTCAAACCATGGACTCTGTGGTGGATCCCAATTTCAAGTTCCACCATGCAAAAGAAAAACTAGCATATCTATCTTGAAGTATGTTATTCCGGGGATCTTGTCAGCAATGCTTCTTGCGACCTCCATTATTTGGATGTTGATGTTACGTAGAAAAAAGAATGAAACAGCTGCAGCACATATTATCTTGATGCCTCAAGTTTTACGCAGAAGGGTTTCATACCAAGAGCTCCTATGTGCGACAGATGGATTCAATGAAAGCAACTTACTTGGTATTGGGGCTTTTGGCTCAGTATATAAAGGAACATTTCCAGATGAGATAGATGTTGCAATAAAGGTTTTCAATTTGGATTTAGAAGGGGCATTTGCAAGTTTTGAGGTTGAGTGTGAAATGCTAAGTAATGTTCGTCACAGAAATCTTGTCAAAGTCATCAGTTGTTGTAGTCAAATTGATTTCAAAGGTCTTGTATTGAATTACATGCCTAATGGGAGCCTTGAGAAGTGGTTGCATTCTCAGAATTCTTCTTTGGACTTGGTGCAGAGGTTGGATATAATGATAGATGTTGCATCGGCATTGGAGTACCTTCACCATGATTGTGAAGTACCTATTGTCCATTGCGATTTGAAGCCTAGTAACATCTTACTAGATAATGATATGGTTGCACATGTTGCTGATTTTGGTATTGCAAAACTCTTGGGTGGAGGAGATTCTATGACTCAAACCATGACCCTAGCCACAATTGGGTATATTGCTCCAGAGTATGGAATGGAAGGAATAGTGACCAGAAGAGGGGATGTGTATAGTTTCGGTATTGTAGTGATGGAAACATTTACAAGAAGGAAACCAACTGATGAGATCTTCATTGGGGAAATGAGATTAAGTCAATGGGTTGCGAATCACCTAGTTGCAAATGCGATAGTTGATGTTGTGGATGCTACTTTACTTGGAACCGAGGAGGATCATGAGTTCGTGAGCAAGAGGGAGTGCTTATCATCTATTATGAGATTAGCTGTTGCTTGTTCAGCAGAATCACCGGAAGAGAGGATAAACATGCAAGAGGTTGTAGCCATGCTTTAA

Protein Analysis

813

Amino Acids

88.47

Weight (kDa)

5.37

Isoelectric Point (pI)

37.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 378 - 437 5.1e-09 Leucine rich repeat
Pkinase PF00069 540 - 811 1.1e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 543 - 813 5.4e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 1497, 2126
AciI CCGC 3 cut(s) 478, 1329, 1332
AclWI GGATC 4 cut(s) 1386, 1399, 1469, 2331
AcoI YGGCCR 1 cut(s) 205
AcsI RAATTY 6 cut(s) 550, 688, 952, 1291, 1320, 1882
AcuI CTGAAG 1 cut(s) 592
AdeI CACNNNGTG 1 cut(s) 444
AfaI GTAC 5 cut(s) 857, 888, 1107, 1946, 1968
AfiI CCNNNNNNNGG 6 cut(s) 1037, 1331, 1497, 2106, 2126, 2154
AflIII ACRYGT 1 cut(s) 2029
AjnI CCWGG 1 cut(s) 402
AjuI GAANNNNNNNTTGG 8 cut(s) 831, 863, 1305, 1337, 1389, 1421, 1874, 1906
AleI CACNNNNGTG 1 cut(s) 1244
AloI GAACNNNNNNTCC 2 cut(s) 2315, 2347
Alw21I GWGCWC 2 cut(s) 471, 1596
Alw26I GTCTC 1 cut(s) 1263
AlwI GGATC 4 cut(s) 1386, 1399, 1469, 2331
AoxI GGCC 6 cut(s) 205, 259, 298, 712, 737, 1171
ApeKI GCWGC 4 cut(s) 279, 654, 1535, 1538
ApoI RAATTY 6 cut(s) 550, 688, 952, 1291, 1320, 1882
Asp700I GAANNNNTTC 1 cut(s) 1579
AspLEI GCGC 1 cut(s) 307
AspS9I GGNCC 5 cut(s) 134, 737, 1028, 1172, 1334
AsuC2I CCSGG 2 cut(s) 22, 1458
AsuHPI GGTGA 3 cut(s) 1943, 2255, 2388
AvaII GGWCC 3 cut(s) 134, 1028, 1334
BamHI GGATCC 1 cut(s) 1391
BanII GRGCYC 1 cut(s) 1596
BarI GAAGNNNNNNTAC 2 cut(s) 123, 155
BbsI GAAGAC 1 cut(s) 766
Bbv12I GWGCWC 2 cut(s) 471, 1596
BbvI GCAGC 4 cut(s) 291, 666, 1522, 1550
BccI CCATC 5 cut(s) 223, 377, 973, 1604, 2179
BceAI ACGGC 1 cut(s) 220
BciT130I CCWGG 1 cut(s) 404
BciVI GTATCC 1 cut(s) 803
BcnI CCSGG 2 cut(s) 22, 1458
BcoDI GTCTC 1 cut(s) 1263
BfmI CTRYAG 1 cut(s) 1536
BfuI GTATCC 1 cut(s) 803
BglII AGATCT 1 cut(s) 2220
BisI GCNGC 5 cut(s) 280, 655, 1330, 1536, 1539
BlsI GCNGC 5 cut(s) 281, 656, 1331, 1537, 1540
Bme1390I CCNGG 3 cut(s) 22, 404, 1458
Bme18I GGWCC 3 cut(s) 134, 1028, 1334
BmgT120I GGNCC 5 cut(s) 134, 737, 1028, 1172, 1334
BmiI GGNNCC 3 cut(s) 1393, 1856, 2314
BmrFI CCNGG 3 cut(s) 22, 404, 1458
BmrI ACTGGG 1 cut(s) 669
BmsI GCATC 7 cut(s) 489, 632, 923, 1294, 1545, 1940, 2287
BmuI ACTGGG 1 cut(s) 669
BpiI GAAGAC 1 cut(s) 766
BpmI CTGGAG 3 cut(s) 495, 1263, 2103
Bpu10I CCTNAGC 2 cut(s) 1150, 1201
BpuEI CTTGAG 4 cut(s) 679, 1265, 1545, 1880
BpuMI CCSGG 2 cut(s) 22, 1458
BsaAI YACGTR 1 cut(s) 1514
BsaJI CCNNGG 5 cut(s) 403, 1312, 1375, 1457, 2316
BsaWI WCCGGW 1 cut(s) 2398
BsaXI ACNNNNNCTCC 2 cut(s) 493, 523
Bsc4I CCNNNNNNNGG 6 cut(s) 1037, 1331, 1497, 2106, 2126, 2154
Bse1I ACTGG 2 cut(s) 675, 1246
Bse3DI GCAATG 3 cut(s) 800, 1479, 1978
BseBI CCWGG 1 cut(s) 404
BseDI CCNNGG 5 cut(s) 403, 1312, 1375, 1457, 2316
BseGI GGATG 6 cut(s) 215, 669, 1010, 1506, 2164, 2302
BseLI CCNNNNNNNGG 6 cut(s) 1037, 1331, 1497, 2106, 2126, 2154
BseMI GCAATG 3 cut(s) 800, 1479, 1978
BseMII CTCAG 6 cut(s) 361, 484, 585, 722, 1668, 1892
BseNI ACTGG 2 cut(s) 675, 1246
BseRI GAGGAG 3 cut(s) 335, 2082, 2333
BseXI GCAGC 4 cut(s) 291, 666, 1522, 1550
BseYI CCCAGC 1 cut(s) 286
BsgI GTGCAG 1 cut(s) 1922
BshFI GGCC 6 cut(s) 207, 261, 300, 714, 739, 1173
BsiHKAI GWGCWC 2 cut(s) 471, 1596
BsiSI CCGG 3 cut(s) 22, 1457, 2399
BslFI GGGAC 1 cut(s) 993
BslI CCNNNNNNNGG 6 cut(s) 1037, 1331, 1497, 2106, 2126, 2154
BsmAI GTCTC 1 cut(s) 1263
BsmFI GGGAC 1 cut(s) 993
BsmI GAATGC 1 cut(s) 1873
BsnI GGCC 6 cut(s) 207, 261, 300, 714, 739, 1173
Bsp1286I GDGCHC 2 cut(s) 471, 1596
Bsp143I GATC 5 cut(s) 105, 1391, 1461, 2220, 2323
Bsp19I CCATGG 1 cut(s) 1375
BspACI CCGC 3 cut(s) 478, 1329, 1332
BspANI GGCC 6 cut(s) 207, 261, 300, 714, 739, 1173
BspCNI CTCAG 6 cut(s) 360, 483, 584, 723, 1667, 1891
BspHI TCATGA 1 cut(s) 2326
BspLI GGNNCC 3 cut(s) 1393, 1856, 2314
BspMAI CTGCAG 1 cut(s) 1540
BspPI GGATC 4 cut(s) 1386, 1399, 1469, 2331
BsrDI GCAATG 3 cut(s) 800, 1479, 1978
BsrI ACTGG 2 cut(s) 675, 1246
BssECI CCNNGG 5 cut(s) 403, 1312, 1375, 1457, 2316
BssMI GATC 5 cut(s) 105, 1391, 1461, 2220, 2323
BssT1I CCWWGG 2 cut(s) 1312, 1375
Bst2UI CCWGG 1 cut(s) 404
Bst6I CTCTTC 2 cut(s) 2146, 2397
BstAPI GCANNNNNTGC 2 cut(s) 444, 2033
BstBAI YACGTR 1 cut(s) 1514
BstDSI CCRYGG 1 cut(s) 1375
BstENI CCTNNNNNAGG 1 cut(s) 1035
BstF5I GGATG 6 cut(s) 215, 669, 1010, 1506, 2164, 2302
BstHHI GCGC 1 cut(s) 307
BstKTI GATC 5 cut(s) 108, 1394, 1464, 2223, 2326
BstMAI GTCTC 1 cut(s) 1263
BstMBI GATC 5 cut(s) 105, 1391, 1461, 2220, 2323
BstMWI GCNNNNNNNGC 3 cut(s) 444, 2033, 2387
BstNI CCWGG 1 cut(s) 404
BstNSI RCATGY 4 cut(s) 1200, 1846, 2033, 2419
BstSCI CCNGG 3 cut(s) 20, 402, 1456
BstSFI CTRYAG 1 cut(s) 1536
BstSNI TACGTA 1 cut(s) 1514
BstV1I GCAGC 4 cut(s) 291, 666, 1522, 1550
BstV2I GAAGAC 1 cut(s) 766
BstX2I RGATCY 3 cut(s) 1391, 1461, 2220
BstXI CCANNNNNNTGG 1 cut(s) 1097
BstYI RGATCY 3 cut(s) 1391, 1461, 2220
BsuI GTATCC 1 cut(s) 803
BsuRI GGCC 6 cut(s) 207, 261, 300, 714, 739, 1173
BtgI CCRYGG 1 cut(s) 1375
BtsCI GGATG 6 cut(s) 215, 669, 1010, 1506, 2164, 2302
BtsIMutI CAGTG 3 cut(s) 355, 682, 1239
CciI TCATGA 1 cut(s) 2326
CfoI GCGC 1 cut(s) 307
Cfr13I GGNCC 5 cut(s) 134, 737, 1028, 1172, 1334
Csp6I GTAC 5 cut(s) 856, 887, 1106, 1945, 1967
CviQI GTAC 5 cut(s) 856, 887, 1106, 1945, 1967
DpnI GATC 5 cut(s) 107, 1393, 1463, 2222, 2325
DpnII GATC 5 cut(s) 105, 1391, 1461, 2220, 2323
DraIII CACNNNGTG 1 cut(s) 444
EaeI YGGCCR 1 cut(s) 205
Eam1104I CTCTTC 2 cut(s) 2146, 2397
EarI CTCTTC 2 cut(s) 2146, 2397
Ecl136II GAGCTC 1 cut(s) 1594
Eco105I TACGTA 1 cut(s) 1514
Eco130I CCWWGG 2 cut(s) 1312, 1375
Eco147I AGGCCT 2 cut(s) 300, 714
Eco24I GRGCYC 1 cut(s) 1596
Eco32I GATATC 1 cut(s) 991
Eco47I GGWCC 3 cut(s) 134, 1028, 1334
Eco53kI GAGCTC 1 cut(s) 1594
Eco57I CTGAAG 1 cut(s) 592
EcoICRI GAGCTC 1 cut(s) 1594
EcoNI CCTNNNNNAGG 1 cut(s) 1035
EcoO109I RGGNCCY 2 cut(s) 134, 1172
EcoRI GAATTC 2 cut(s) 952, 1882
EcoRII CCWGG 1 cut(s) 402
EcoRV GATATC 1 cut(s) 991
EcoT14I CCWWGG 2 cut(s) 1312, 1375
EcoT38I GRGCYC 1 cut(s) 1596
ErhI CCWWGG 2 cut(s) 1312, 1375
FalI AAGNNNNNCTT 2 cut(s) 400, 432
FaqI GGGAC 1 cut(s) 993
FauNDI CATATG 1 cut(s) 145
Fnu4HI GCNGC 5 cut(s) 280, 655, 1330, 1536, 1539
FokI GGATG 6 cut(s) 202, 656, 997, 1513, 2171, 2309
FriOI GRGCYC 1 cut(s) 1596
Fsp4HI GCNGC 5 cut(s) 280, 655, 1330, 1536, 1539
GlaI GCGC 1 cut(s) 306
GluI GCNGC 5 cut(s) 280, 655, 1330, 1536, 1539
GsaI CCCAGC 1 cut(s) 290
GsuI CTGGAG 3 cut(s) 495, 1263, 2103
HaeIII GGCC 6 cut(s) 207, 261, 300, 714, 739, 1173
HapII CCGG 3 cut(s) 22, 1457, 2399
HhaI GCGC 1 cut(s) 307
Hin6I GCGC 1 cut(s) 305
HinP1I GCGC 1 cut(s) 305
HincII GTYRAC 1 cut(s) 833
HindII GTYRAC 1 cut(s) 833
HindIII AAGCTT 1 cut(s) 386
HpaII CCGG 3 cut(s) 22, 1457, 2399
HphI GGTGA 3 cut(s) 1943, 2255, 2388
Hpy166II GTNNAC 3 cut(s) 237, 833, 1106
Hpy188I TCNGA 4 cut(s) 83, 393, 1290, 1881
Hpy8I GTNNAC 3 cut(s) 237, 833, 1106
HpyCH4IV ACGT 1 cut(s) 1513
HpyF10VI GCNNNNNNNGC 3 cut(s) 444, 2033, 2387
HpySE526I ACGT 1 cut(s) 1513
HspAI GCGC 1 cut(s) 305
Kzo9I GATC 5 cut(s) 105, 1391, 1461, 2220, 2323
LmnI GCTCC 3 cut(s) 1599, 1854, 2122
Lsp1109I GCAGC 4 cut(s) 291, 666, 1522, 1550
LweI GCATC 7 cut(s) 489, 632, 923, 1294, 1545, 1940, 2287
MaeII ACGT 1 cut(s) 1513
MaeIII GTNAC 7 cut(s) 11, 410, 665, 1509, 1772, 1997, 2143
MalI GATC 5 cut(s) 107, 1393, 1463, 2222, 2325
MboI GATC 5 cut(s) 105, 1391, 1461, 2220, 2323
MboII GAAGA 8 cut(s) 152, 217, 764, 771, 1878, 2163, 2215, 2414
MfeI CAATTG 1 cut(s) 2103
MflI RGATCY 3 cut(s) 1391, 1461, 2220
MhlI GDGCHC 2 cut(s) 471, 1596
MlyI GAGTC 3 cut(s) 947, 1374, 2074
MmeI TCCRAC 1 cut(s) 1890
MroXI GAANNNNTTC 1 cut(s) 1579
MseI TTAA 5 cut(s) 17, 519, 584, 2243, 2440
MslI CAYNNNNRTG 2 cut(s) 1244, 1959
MspA1I CMGCKG 1 cut(s) 1535
MspI CCGG 3 cut(s) 22, 1457, 2399
MspR9I CCNGG 3 cut(s) 22, 404, 1458
MunI CAATTG 1 cut(s) 2103
Mva1269I GAATGC 1 cut(s) 1873
MvaI CCWGG 1 cut(s) 404
MwoI GCNNNNNNNGC 3 cut(s) 444, 2033, 2387
NciI CCSGG 2 cut(s) 22, 1458
NcoI CCATGG 1 cut(s) 1375
NdeI CATATG 1 cut(s) 145
NdeII GATC 5 cut(s) 105, 1391, 1461, 2220, 2323
NlaIV GGNNCC 3 cut(s) 1393, 1856, 2314
NmeAIII GCCGAG 1 cut(s) 237
NmuCI GTSAC 3 cut(s) 11, 1772, 2143
NspI RCATGY 4 cut(s) 1200, 1846, 2033, 2419
OliI CACNNNNGTG 1 cut(s) 1244
PagI TCATGA 1 cut(s) 2326
PceI AGGCCT 2 cut(s) 300, 714
PciI ACATGT 1 cut(s) 2029
PctI GAATGC 1 cut(s) 1873
PdmI GAANNNNTTC 1 cut(s) 1579
PfeI GAWTC 9 cut(s) 340, 394, 868, 1249, 1358, 1614, 2072, 2260, 2393
PflMI CCANNNNNTGG 2 cut(s) 1497, 2126
PkrI GCNGC 5 cut(s) 281, 656, 1331, 1537, 1540
PleI GAGTC 3 cut(s) 946, 1374, 2074
PpsI GAGTC 3 cut(s) 946, 1374, 2074
Ppu21I YACGTR 1 cut(s) 1514
PpuMI RGGWCCY 1 cut(s) 134
PscI ACATGT 1 cut(s) 2029
Psp124BI GAGCTC 1 cut(s) 1596
Psp5II RGGWCCY 1 cut(s) 134
Psp6I CCWGG 1 cut(s) 402
PspFI CCCAGC 1 cut(s) 286
PspGI CCWGG 1 cut(s) 402
PspN4I GGNNCC 3 cut(s) 1393, 1856, 2314
PspPI GGNCC 5 cut(s) 134, 737, 1028, 1172, 1334
PspPPI RGGWCCY 1 cut(s) 134
PstI CTGCAG 1 cut(s) 1540
PsuI RGATCY 3 cut(s) 1391, 1461, 2220
PvuII CAGCTG 1 cut(s) 1535
RsaI GTAC 5 cut(s) 857, 888, 1107, 1946, 1968
RsaNI GTAC 5 cut(s) 856, 887, 1106, 1945, 1967
RseI CAYNNNNRTG 2 cut(s) 1244, 1959
SacI GAGCTC 1 cut(s) 1596
SaqAI TTAA 5 cut(s) 17, 519, 584, 2243, 2440
SatI GCNGC 5 cut(s) 280, 655, 1330, 1536, 1539
Sau3AI GATC 5 cut(s) 105, 1391, 1461, 2220, 2323
Sau96I GGNCC 5 cut(s) 134, 737, 1028, 1172, 1334
SchI GAGTC 3 cut(s) 947, 1374, 2074
ScrFI CCNGG 3 cut(s) 22, 404, 1458
SduI GDGCHC 2 cut(s) 471, 1596
SfaNI GCATC 7 cut(s) 489, 632, 923, 1294, 1545, 1940, 2287
SfcI CTRYAG 1 cut(s) 1536
SinI GGWCC 3 cut(s) 134, 1028, 1334
SmiMI CAYNNNNRTG 2 cut(s) 1244, 1959
SmlI CTYRAG 4 cut(s) 658, 1280, 1560, 1859
SmoI CTYRAG 4 cut(s) 658, 1280, 1560, 1859
SnaBI TACGTA 1 cut(s) 1514
SseBI AGGCCT 2 cut(s) 300, 714
SsiI CCGC 3 cut(s) 478, 1329, 1332
SspI AATATT 2 cut(s) 7, 523
SstI GAGCTC 1 cut(s) 1596
StuI AGGCCT 2 cut(s) 300, 714
StyD4I CCNGG 3 cut(s) 20, 402, 1456
StyI CCWWGG 2 cut(s) 1312, 1375
TaiI ACGT 1 cut(s) 1516
TaqI TCGA 3 cut(s) 47, 108, 599
TatI WGTACW 1 cut(s) 855
TauI GCSGC 1 cut(s) 1332
TfiI GAWTC 9 cut(s) 340, 394, 868, 1249, 1358, 1614, 2072, 2260, 2393
Tru1I TTAA 5 cut(s) 17, 519, 584, 2243, 2440
Tru9I TTAA 5 cut(s) 17, 519, 584, 2243, 2440
TscAI CASTG 3 cut(s) 355, 682, 1246
TseFI GTSAC 3 cut(s) 11, 1772, 2143
TseI GCWGC 4 cut(s) 279, 654, 1535, 1538
Tsp45I GTSAC 3 cut(s) 11, 1772, 2143
TspDTI ATGAA 6 cut(s) 17, 353, 1542, 1572, 1635, 2215
TspRI CASTG 3 cut(s) 355, 682, 1246
Van91I CCANNNNNTGG 2 cut(s) 1497, 2126
VpaK11BI GGWCC 3 cut(s) 134, 1028, 1334
XagI CCTNNNNNAGG 1 cut(s) 1035
XapI RAATTY 6 cut(s) 550, 688, 952, 1291, 1320, 1882
XbaI TCTAGA 4 cut(s) 397, 817, 1165, 1261
XceI RCATGY 4 cut(s) 1200, 1846, 2033, 2419
XcmI CCANNNNNNNNNTGG 2 cut(s) 972, 1382
XmnI GAANNNNTTC 1 cut(s) 1579
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.