RchiOBHm_Chr4g0403141

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
22170903 .. 22174089
3187 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ37490

Sequence Viewer

Length: 2679 bp
ATGTCCTATAACGTCCTTACTGGTTCACTTCCTTCTTCCCTGTTTAACCTGTCTTCTTTATGTACTTTTTCTGTGCACAAAAATTACCTTTCTGGAAGTTTTCTTGATGTTGATCTCTGCCATTCTTGGCCTAGACTTCAATTCCTTTCTCTTACTGACAACAAATTCACTGGCCAGCTTCCTTACCTCAGCAATTGTACAGAGCTTGTCATATTGTCTTTATCACAAAACAAGTTTGTGGGAAAAATTCCAGTAGATATTGGCAACTTCAAAAACCTTGAAGAACTTTATCTTGATTTTAATGGCCTCACTGGTACTATACCTCCTACCATAGGTAACTTGTCCAGCTTGAAATCCTTGGGTTTAACGCAGAATAACGTTAAGGGAAGCATACCTCGTGATTTAGGACGTCTTTCTAGATTGGTCAAATTTTTGATTCGTAGGAATGGCCTAAGCGGACCAGTGCCTCCAGAAATATTCAATATCTCTTCTCTGCAAGTTATTGAAGCATCCGATAATGCCCTTTCAGGAAAGTTTCCTTCCTCTTCTGCAGTTCGGCTTCCTAGCATTGAATTCATCTCTTTTGCTAACAATAAAATTACTGGACATGTCCCATCCTATTTTGCAAATTTTACAAAGCTCCATTCATTTCAGGTTAAAAACAACTCTCTCTACGGACCAATTCCCAAGAATTTTGGTAGCTTAAATCTCCTCGAAACTCTTCATCTCGGGGGAAATCAATTAACAGGAGATCCCGGAGTTCCTACACTTGATTTTCTTTCTTCTTTGTTTAATTGCCCTTTCCTGAAAGAATTAGTTCTGTCTGAGAATCCTTTAAATGGCACCATACCAAACTCCTTTGGAAATTCTTCTTCTCCTCTCCAGTTGTTTTGCATAGACAAGTGCCAGATTAAGGGCCACATACCCAAGGGAATTGGTTCTTTGAAAAGCTTGACGCGCCTTTGTTGGGCTAACAACAATCTGAGTGGAAATATACCAGAGTCAATTGGAGGTTTGGAGAGGCTGCAAAGATTGTATCTTGGCAACAACAGTTTAGAAGGCTGTATTCCAGACGAGCTTTGTCTTTTGAGGAACCTGGGAGAACTATCACTACAAAACAATAAAATCTCTGAATCAATCCCAAATTGCATAGGAAACCTCAACCTCCTTCAGAAAGTTTTCCTAAGTTCCAATAGATTGACATCATCAGTACCGTTGGGTTTATGGGACCTTGAAAATCTCCTGTTCTTAGATCTGTCAATCAATTCTTTTTATGGGAACTTACCTCCAAGCTTGAGCAAGTTGAATGCCATTCAAGAGATAGATTTATCTCAAAACCAATTTACCGGAAACATTCCAAGCACCATAGGCAGTTTGCAAACTCTGAGCTCTCTTAATCTGTCACAAAACTTCTTTACAGGTTCTGTTCCACAAACTTTTGGTGATCAGCTGAAAGGGTTGGAATTGTTGGACTTATCATTCAATAATCTTTCTGGTGCAATACCAAACTCTCTTGAGAAACTCAAATTTCTCAACTACTTAAATCTCTCGTTCAACTACCTCTCCGGAGAGGTCCCTTCTGGGGGACGTTTCGTCAACTTCAATGCCCAGTCATTTTTGGAGAATAAAGCACTATGTGGGAGACGAGAGTTTGGACTCCCACCTTGCAAGACTCATAGGACTCAAAAATCAAAAGTGGCCACTCGTTTGCTGGCCAAATATGTATGGAAAAGAAAGAGAGGCAAGACTCCGAGTTCAGTTGAACAGTTAACAACAGTGGAGCATATTGTGATATCATATCAAGAACTCCGTCGGGCTACAAATGACTTTTGTGAAAGCAACTTACTTGGAGTGGGAAGTTTTGGCTCGGTGTACAAGGGGATACTGTCTAATGGGACAACCATTGCTGTCAAAGTTCTTAAGCTGGAAATGGAGGGTGCTGTAAAAAGTTTTGATGCAGAATGCAAGGTGTGGAGAACAATCCGGCATAGGAATCTTGTAAAGGTCATAACTACATGTTCTAGCCCTGAGGTCAGTGCTTTGGTGCTGCAGTACATGTCTAATGGCAGTCTTGAGAAATGGTTATACTCTCACAACTACTGTCTCAGTATTCTGCAAAGAGTGAGCATGTTGATCGATATTGCATCTGCTTTGGAATATCTCCATCATGGCCAAGCAGAAGCAGTGGTGCACTGTGATGTGAAGCCTGGGAATATCCTTCTTGATGAAGACATGGTAGCACATGTTGCAGACTTCGGTCTTGCAAAAAATTTAGCAAAAAACAAAGAGGAAACACAGACAAGAACCATCGGCACTCTGGGCTACGTAGCACCAGAGTATGGTTCTGCCGGAAAAGTGTCCAAAAAGGGTGATGTCTATAGCTTTGGGATAATGCTGCTGGAAATAATGGCGAGAAAGAAACCCACTGATGAAATGTTTGCCGGAGAAGTTACTTTGAGGCAATGGATAAATGTCTCTATCCCTGATAATGTTCTGGAAGTGGTGGATGCTGGCTTATTGAGCATAGAAGAGGGAAGAGACATGAATGCCACAGAAAGTATCCTAGTGTCCATCCTCGAAATAGGCTTGACGTGTTCGGAAGAAGTAGCAGAGGATAGAATGGACATTAAGGATGTGGTGCCCAAGCTCAAGAAAATAAAATTGGCACTACAACATTGA

Protein Analysis

892

Amino Acids

98.11

Weight (kDa)

8.14

Isoelectric Point (pI)

36.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 58 - 170 5.6e-07 Leucine-rich repeat region
LRR_8 PF13855 92 - 151 6.6e-06 Leucine rich repeat
LRR_14 PF23598 297 - 447 1.2e-09 Leucine-rich repeat region
LRR_8 PF13855 318 - 376 8.7e-06 Leucine rich repeat
LRR_14 PF23598 408 - 520 2.5e-06 Leucine-rich repeat region
LRR_8 PF13855 461 - 521 1e-07 Leucine rich repeat
Pkinase PF00069 613 - 810 6.5e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 614 - 882 1e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 412
AccB1I GGYRCC 2 cut(s) 842, 2638
AccB7I CCANNNNNTGG 1 cut(s) 2339
AccII CGCG 1 cut(s) 958
AccIII TCCGGA 1 cut(s) 1565
AciI CCGC 1 cut(s) 456
AclI AACGTT 1 cut(s) 378
AclWI GGATC 1 cut(s) 746
AcoI YGGCCR 4 cut(s) 172, 1698, 1713, 2170
AcsI RAATTY 9 cut(s) 164, 246, 428, 572, 628, 691, 865, 1526, 2269
AcuI CTGAAG 1 cut(s) 1154
AcyI GRCGYC 1 cut(s) 409
AdeI CACNNNGTG 1 cut(s) 1637
AfaI GTAC 6 cut(s) 64, 199, 316, 1212, 1874, 2054
AfiI CCNNNNNNNGG 7 cut(s) 332, 839, 913, 967, 1582, 1583, 2339
AflII CTTAAG 1 cut(s) 1919
AflIII ACRYGT 5 cut(s) 607, 2015, 2055, 2242, 2591
AhdI GACNNNNNGTC 1 cut(s) 1592
AjiI CACGTC 1 cut(s) 2592
AjnI CCWGG 2 cut(s) 1095, 2206
AjuI GAANNNNNNNTTGG 2 cut(s) 2645, 2677
Alw21I GWGCWC 3 cut(s) 78, 1391, 2193
Alw26I GTCTC 4 cut(s) 1636, 2108, 2479, 2532
Alw44I GTGCAC 2 cut(s) 74, 2189
AlwI GGATC 1 cut(s) 746
AlwNI CAGNNNCTG 1 cut(s) 1424
Ama87I CYCGRG 1 cut(s) 728
Aor13HI TCCGGA 1 cut(s) 1565
AoxI GGCC 8 cut(s) 128, 172, 304, 448, 916, 1698, 1713, 2170
ApaLI GTGCAC 2 cut(s) 74, 2189
ApeKI GCWGC 3 cut(s) 1024, 2047, 2395
ApoI RAATTY 9 cut(s) 164, 246, 428, 572, 628, 691, 865, 1526, 2269
Asp700I GAANNNNTTC 5 cut(s) 720, 816, 868, 937, 1178
AspLEI GCGC 1 cut(s) 960
AspS9I GGNCC 5 cut(s) 458, 677, 916, 1228, 1573
AsuC2I CCSGG 1 cut(s) 756
AsuHPI GGTGA 2 cut(s) 1454, 2381
AvaI CYCGRG 1 cut(s) 728
AvaII GGWCC 4 cut(s) 458, 677, 1228, 1573
AxyI CCTNAGG 1 cut(s) 2028
BaeGI GKGCMC 3 cut(s) 78, 2193, 2643
BalI TGGCCA 4 cut(s) 174, 1700, 1715, 2172
BanI GGYRCC 2 cut(s) 842, 2638
BanII GRGCYC 1 cut(s) 1391
BauI CACGAG 1 cut(s) 396
BbsI GAAGAC 2 cut(s) 45, 2235
Bbv12I GWGCWC 3 cut(s) 78, 1391, 2193
BbvCI CCTCAGC 1 cut(s) 188
BbvI GCAGC 3 cut(s) 1011, 2034, 2382
BccI CCATC 4 cut(s) 622, 2172, 2315, 2579
BcgI CGANNNNNNTGC 2 cut(s) 2116, 2150
BciT130I CCWGG 2 cut(s) 1097, 2208
BciVI GTATCC 2 cut(s) 1875, 2570
BclI TGATCA 1 cut(s) 1444
BcnI CCSGG 1 cut(s) 756
BcoDI GTCTC 4 cut(s) 1636, 2108, 2479, 2532
BfaI CTAG 5 cut(s) 132, 417, 564, 2022, 2564
BfmI CTRYAG 3 cut(s) 549, 2048, 2377
BfrI CTTAAG 1 cut(s) 1919
BfuI GTATCC 2 cut(s) 1875, 2570
BglII AGATCT 1 cut(s) 1252
BisI GCNGC 3 cut(s) 1025, 2048, 2396
BlsI GCNGC 3 cut(s) 1026, 2049, 2397
Bme1390I CCNGG 3 cut(s) 756, 1097, 2208
Bme18I GGWCC 4 cut(s) 458, 677, 1228, 1573
BmeRI GACNNNNNGTC 1 cut(s) 1592
BmeT110I CYCGRG 1 cut(s) 728
BmgBI CACGTC 1 cut(s) 2592
BmgT120I GGNCC 5 cut(s) 458, 677, 916, 1228, 1573
BmiI GGNNCC 5 cut(s) 844, 1094, 1229, 1575, 2640
BmrFI CCNGG 3 cut(s) 756, 1097, 2208
BmrI ACTGGG 1 cut(s) 1603
BmsI GCATC 4 cut(s) 518, 1945, 2153, 2497
BmuI ACTGGG 1 cut(s) 1603
BoxI GACNNNNGTC 1 cut(s) 2256
BpiI GAAGAC 2 cut(s) 45, 2235
BpmI CTGGAG 2 cut(s) 453, 866
Bpu10I CCTNAGC 2 cut(s) 188, 452
BpuEI CTTGAG 4 cut(s) 1315, 1535, 2093, 2633
BpuMI CCSGG 1 cut(s) 756
Bsa29I ATCGAT 1 cut(s) 2136
BsaAI YACGTR 1 cut(s) 2326
BsaBI GATNNNNATC 2 cut(s) 111, 1201
BsaHI GRCGYC 1 cut(s) 409
BsaJI CCNNGG 4 cut(s) 357, 927, 1096, 2207
BsaWI WCCGGW 2 cut(s) 1346, 1565
BsaXI ACNNNNNCTCC 4 cut(s) 307, 337, 1547, 1577
Bsc4I CCNNNNNNNGG 7 cut(s) 332, 839, 913, 967, 1582, 1583, 2339
Bse1I ACTGG 8 cut(s) 25, 175, 251, 316, 461, 607, 883, 1609
Bse21I CCTNAGG 1 cut(s) 2028
Bse3DI GCAATG 2 cut(s) 1902, 2468
Bse8I GATNNNNATC 2 cut(s) 111, 1201
BseAI TCCGGA 1 cut(s) 1565
BseBI CCWGG 2 cut(s) 1097, 2208
BseCI ATCGAT 1 cut(s) 2136
BseDI CCNNGG 4 cut(s) 357, 927, 1096, 2207
BseGI GGATG 5 cut(s) 509, 614, 2512, 2571, 2638
BseJI GATNNNNATC 2 cut(s) 111, 1201
BseLI CCNNNNNNNGG 7 cut(s) 332, 839, 913, 967, 1582, 1583, 2339
BseMI GCAATG 2 cut(s) 1902, 2468
BseMII CTCAG 6 cut(s) 202, 816, 974, 1376, 2019, 2119
BseNI ACTGG 8 cut(s) 25, 175, 251, 316, 461, 607, 883, 1609
BseRI GAGGAG 2 cut(s) 701, 867
BseSI GKGCMC 3 cut(s) 78, 2193, 2643
BseXI GCAGC 3 cut(s) 1011, 2034, 2382
Bsh1236I CGCG 1 cut(s) 958
BshFI GGCC 8 cut(s) 130, 174, 306, 450, 918, 1700, 1715, 2172
BshNI GGYRCC 2 cut(s) 842, 2638
BshVI ATCGAT 1 cut(s) 2136
BsiHKAI GWGCWC 3 cut(s) 78, 1391, 2193
BsiHKCI CYCGRG 1 cut(s) 728
BsiSI CCGG 6 cut(s) 756, 1347, 1566, 1984, 2349, 2442
BslFI GGGAC 5 cut(s) 596, 1241, 1559, 1599, 1909
BslI CCNNNNNNNGG 7 cut(s) 332, 839, 913, 967, 1582, 1583, 2339
BsmAI GTCTC 4 cut(s) 1636, 2108, 2479, 2532
BsmBI CGTCTC 1 cut(s) 1636
BsmFI GGGAC 5 cut(s) 596, 1241, 1559, 1599, 1909
BsmI GAATGC 3 cut(s) 1312, 1967, 2551
BsnI GGCC 8 cut(s) 130, 174, 306, 450, 918, 1700, 1715, 2172
BsoBI CYCGRG 1 cut(s) 728
Bsp1286I GDGCHC 4 cut(s) 78, 1391, 2193, 2643
Bsp13I TCCGGA 1 cut(s) 1565
Bsp1407I TGTACA 2 cut(s) 197, 1872
Bsp143I GATC 5 cut(s) 112, 751, 1252, 1444, 2133
BspACI CCGC 1 cut(s) 456
BspANI GGCC 8 cut(s) 130, 174, 306, 450, 918, 1700, 1715, 2172
BspCNI CTCAG 6 cut(s) 201, 817, 975, 1377, 2020, 2118
BspDI ATCGAT 1 cut(s) 2136
BspEI TCCGGA 1 cut(s) 1565
BspFNI CGCG 1 cut(s) 958
BspLI GGNNCC 5 cut(s) 844, 1094, 1229, 1575, 2640
BspMAI CTGCAG 2 cut(s) 553, 2052
BspPI GGATC 1 cut(s) 746
BspT107I GGYRCC 2 cut(s) 842, 2638
BspTI CTTAAG 1 cut(s) 1919
BsrDI GCAATG 2 cut(s) 1902, 2468
BsrGI TGTACA 2 cut(s) 197, 1872
BsrI ACTGG 8 cut(s) 25, 175, 251, 316, 461, 607, 883, 1609
BssECI CCNNGG 4 cut(s) 357, 927, 1096, 2207
BssMI GATC 5 cut(s) 112, 751, 1252, 1444, 2133
BssNI GRCGYC 1 cut(s) 409
BssSI CACGAG 1 cut(s) 396
BssT1I CCWWGG 2 cut(s) 357, 927
Bst2BI CACGAG 1 cut(s) 396
Bst2UI CCWGG 2 cut(s) 1097, 2208
Bst4CI ACNGT 7 cut(s) 1052, 1215, 1767, 1777, 1887, 2102, 2195
Bst6I CTCTTC 5 cut(s) 493, 550, 726, 2523, 2530
BstACI GRCGYC 1 cut(s) 409
BstAFI CTTAAG 1 cut(s) 1919
BstAPI GCANNNNNTGC 1 cut(s) 2246
BstAUI TGTACA 2 cut(s) 197, 1872
BstBAI YACGTR 1 cut(s) 2326
BstC8I GCNNGC 3 cut(s) 176, 1713, 2512
BstDEI CTNAG 9 cut(s) 188, 452, 825, 983, 1184, 1249, 1385, 2028, 2105
BstENI CCTNNNNNAGG 1 cut(s) 330
BstF5I GGATG 5 cut(s) 509, 614, 2512, 2571, 2638
BstFNI CGCG 1 cut(s) 958
BstHHI GCGC 1 cut(s) 960
BstKTI GATC 5 cut(s) 115, 754, 1255, 1447, 2136
BstMAI GTCTC 4 cut(s) 1636, 2108, 2479, 2532
BstMBI GATC 5 cut(s) 112, 751, 1252, 1444, 2133
BstMWI GCNNNNNNNGC 5 cut(s) 957, 1368, 2246, 2319, 2520
BstNI CCWGG 2 cut(s) 1097, 2208
BstNSI RCATGY 5 cut(s) 611, 2019, 2059, 2131, 2246
BstPAI GACNNNNGTC 1 cut(s) 2256
BstSCI CCNGG 3 cut(s) 754, 1095, 2206
BstSFI CTRYAG 3 cut(s) 549, 2048, 2377
BstSLI GKGCMC 3 cut(s) 78, 2193, 2643
BstSNI TACGTA 1 cut(s) 2326
BstUI CGCG 1 cut(s) 958
BstV1I GCAGC 3 cut(s) 1011, 2034, 2382
BstV2I GAAGAC 2 cut(s) 45, 2235
BstX2I RGATCY 2 cut(s) 751, 1252
BstYI RGATCY 2 cut(s) 751, 1252
Bsu15I ATCGAT 1 cut(s) 2136
Bsu36I CCTNAGG 1 cut(s) 2028
BsuI GTATCC 2 cut(s) 1875, 2570
BsuRI GGCC 8 cut(s) 130, 174, 306, 450, 918, 1700, 1715, 2172
BsuTUI ATCGAT 1 cut(s) 2136
BtrI CACGTC 1 cut(s) 2592
BtsCI GGATG 5 cut(s) 509, 614, 2512, 2571, 2638
BtsI GCAGTG 1 cut(s) 2190
BtsIMutI CAGTG 8 cut(s) 168, 309, 468, 1782, 2041, 2190, 2191, 2424
Cac8I GCNNGC 3 cut(s) 176, 1713, 2512
CaiI CAGNNNCTG 1 cut(s) 1424
CfoI GCGC 1 cut(s) 960
Cfr13I GGNCC 5 cut(s) 458, 677, 916, 1228, 1573
ClaI ATCGAT 1 cut(s) 2136
CseI GACGC 1 cut(s) 964
Csp6I GTAC 6 cut(s) 63, 198, 315, 1211, 1873, 2053
CspCI CAANNNNNGTGG 2 cut(s) 967, 1002
CviAII CATG 8 cut(s) 608, 2016, 2056, 2128, 2168, 2233, 2243, 2542
CviQI GTAC 6 cut(s) 63, 198, 315, 1211, 1873, 2053
DdeI CTNAG 9 cut(s) 188, 452, 825, 983, 1184, 1249, 1385, 2028, 2105
DpnI GATC 5 cut(s) 114, 753, 1254, 1446, 2135
DpnII GATC 5 cut(s) 112, 751, 1252, 1444, 2133
DraI TTTAAA 1 cut(s) 837
DraIII CACNNNGTG 1 cut(s) 1637
DriI GACNNNNNGTC 1 cut(s) 1592
EaeI YGGCCR 4 cut(s) 172, 1698, 1713, 2170
Eam1104I CTCTTC 5 cut(s) 493, 550, 726, 2523, 2530
Eam1105I GACNNNNNGTC 1 cut(s) 1592
EarI CTCTTC 5 cut(s) 493, 550, 726, 2523, 2530
Ecl136II GAGCTC 1 cut(s) 1389
Eco105I TACGTA 1 cut(s) 2326
Eco130I CCWWGG 2 cut(s) 357, 927
Eco24I GRGCYC 1 cut(s) 1391
Eco32I GATATC 1 cut(s) 1794
Eco47I GGWCC 4 cut(s) 458, 677, 1228, 1573
Eco53kI GAGCTC 1 cut(s) 1389
Eco57I CTGAAG 1 cut(s) 1154
Eco81I CCTNAGG 1 cut(s) 2028
Eco88I CYCGRG 1 cut(s) 728
EcoICRI GAGCTC 1 cut(s) 1389
EcoNI CCTNNNNNAGG 1 cut(s) 330
EcoO109I RGGNCCY 2 cut(s) 1228, 1573
EcoRI GAATTC 1 cut(s) 572
EcoRII CCWGG 2 cut(s) 1095, 2206
EcoRV GATATC 1 cut(s) 1794
EcoT14I CCWWGG 2 cut(s) 357, 927
EcoT38I GRGCYC 1 cut(s) 1391
ErhI CCWWGG 2 cut(s) 357, 927
Esp3I CGTCTC 1 cut(s) 1636
FaeI CATG 8 cut(s) 611, 2019, 2059, 2131, 2171, 2236, 2246, 2545
FaqI GGGAC 5 cut(s) 596, 1241, 1559, 1599, 1909
FatI CATG 8 cut(s) 607, 2015, 2055, 2127, 2167, 2232, 2242, 2541
FbaI TGATCA 1 cut(s) 1444
Fnu4HI GCNGC 3 cut(s) 1025, 2048, 2396
FokI GGATG 5 cut(s) 496, 601, 2519, 2558, 2645
FriOI GRGCYC 1 cut(s) 1391
Fsp4HI GCNGC 3 cut(s) 1025, 2048, 2396
FspBI CTAG 5 cut(s) 132, 417, 564, 2022, 2564
GlaI GCGC 1 cut(s) 959
GluI GCNGC 3 cut(s) 1025, 2048, 2396
GsuI CTGGAG 2 cut(s) 453, 866
HaeIII GGCC 8 cut(s) 130, 174, 306, 450, 918, 1700, 1715, 2172
HapII CCGG 6 cut(s) 756, 1347, 1566, 1984, 2349, 2442
HgaI GACGC 1 cut(s) 964
HhaI GCGC 1 cut(s) 960
Hin1I GRCGYC 1 cut(s) 409
Hin1II CATG 8 cut(s) 611, 2019, 2059, 2131, 2171, 2236, 2246, 2545
Hin6I GCGC 1 cut(s) 958
HinP1I GCGC 1 cut(s) 958
HincII GTYRAC 2 cut(s) 1597, 1770
HindII GTYRAC 2 cut(s) 1597, 1770
HindIII AAGCTT 2 cut(s) 949, 1291
HinfI GANTC 9 cut(s) 436, 829, 1001, 1133, 1656, 1672, 1681, 1747, 1993
HpaI GTTAAC 1 cut(s) 1770
HpaII CCGG 6 cut(s) 756, 1347, 1566, 1984, 2349, 2442
HphI GGTGA 2 cut(s) 1454, 2381
Hpy166II GTNNAC 6 cut(s) 26, 76, 1597, 1770, 1873, 2191
Hpy188I TCNGA 8 cut(s) 514, 826, 984, 1132, 1173, 1386, 1752, 2599
Hpy8I GTNNAC 6 cut(s) 26, 76, 1597, 1770, 1873, 2191
Hpy99I CGWCG 1 cut(s) 1815
HpyAV CCTTC 6 cut(s) 42, 549, 1052, 1178, 1587, 2228
HpyCH4III ACNGT 7 cut(s) 1052, 1215, 1767, 1777, 1887, 2102, 2195
HpyCH4IV ACGT 6 cut(s) 12, 378, 409, 1588, 2325, 2591
HpyF10VI GCNNNNNNNGC 5 cut(s) 957, 1368, 2246, 2319, 2520
HpyF3I CTNAG 9 cut(s) 188, 452, 825, 983, 1184, 1249, 1385, 2028, 2105
HpySE526I ACGT 6 cut(s) 12, 378, 409, 1588, 2325, 2591
Hsp92I GRCGYC 1 cut(s) 409
Hsp92II CATG 8 cut(s) 611, 2019, 2059, 2131, 2171, 2236, 2246, 2545
HspAI GCGC 1 cut(s) 958
Kpn2I TCCGGA 1 cut(s) 1565
Ksp22I TGATCA 1 cut(s) 1444
KspAI GTTAAC 1 cut(s) 1770
Kzo9I GATC 5 cut(s) 112, 751, 1252, 1444, 2133
LmnI GCTCC 2 cut(s) 645, 1780
Lsp1109I GCAGC 3 cut(s) 1011, 2034, 2382
LweI GCATC 4 cut(s) 518, 1945, 2153, 2497
MaeI CTAG 5 cut(s) 132, 417, 564, 2022, 2564
MaeII ACGT 6 cut(s) 12, 378, 409, 1588, 2325, 2591
MaeIII GTNAC 3 cut(s) 335, 1401, 2449
MalI GATC 5 cut(s) 114, 753, 1254, 1446, 2135
MboI GATC 5 cut(s) 112, 751, 1252, 1444, 2133
MfeI CAATTG 2 cut(s) 193, 1005
MflI RGATCY 2 cut(s) 751, 1252
MhlI GDGCHC 4 cut(s) 78, 1391, 2193, 2643
MlsI TGGCCA 4 cut(s) 174, 1700, 1715, 2172
MluNI TGGCCA 4 cut(s) 174, 1700, 1715, 2172
MlyI GAGTC 5 cut(s) 1010, 1650, 1666, 1675, 1741
MmeI TCCRAC 2 cut(s) 1440, 1449
Mox20I TGGCCA 4 cut(s) 174, 1700, 1715, 2172
MroI TCCGGA 1 cut(s) 1565
MroXI GAANNNNTTC 5 cut(s) 720, 816, 868, 937, 1178
MscI TGGCCA 4 cut(s) 174, 1700, 1715, 2172
MslI CAYNNNNRTG 1 cut(s) 2196
Msp20I TGGCCA 4 cut(s) 174, 1700, 1715, 2172
MspA1I CMGCKG 1 cut(s) 1450
MspCI CTTAAG 1 cut(s) 1919
MspI CCGG 6 cut(s) 756, 1347, 1566, 1984, 2349, 2442
MspR9I CCNGG 3 cut(s) 756, 1097, 2208
MunI CAATTG 2 cut(s) 193, 1005
Mva1269I GAATGC 3 cut(s) 1312, 1967, 2551
MvaI CCWGG 2 cut(s) 1097, 2208
MvnI CGCG 1 cut(s) 958
MwoI GCNNNNNNNGC 5 cut(s) 957, 1368, 2246, 2319, 2520
NciI CCSGG 1 cut(s) 756
NdeII GATC 5 cut(s) 112, 751, 1252, 1444, 2133
NlaIII CATG 8 cut(s) 611, 2019, 2059, 2131, 2171, 2236, 2246, 2545
NlaIV GGNNCC 5 cut(s) 844, 1094, 1229, 1575, 2640
NmuCI GTSAC 1 cut(s) 1401
NspI RCATGY 5 cut(s) 611, 2019, 2059, 2131, 2246
PciI ACATGT 4 cut(s) 607, 2015, 2055, 2242
PctI GAATGC 3 cut(s) 1312, 1967, 2551
PdmI GAANNNNTTC 5 cut(s) 720, 816, 868, 937, 1178
PfeI GAWTC 4 cut(s) 436, 829, 1133, 1993
PflMI CCANNNNNTGG 1 cut(s) 2339
PfoI TCCNGGA 1 cut(s) 754
PkrI GCNGC 3 cut(s) 1026, 2049, 2397
PleI GAGTC 5 cut(s) 1009, 1650, 1666, 1675, 1741
PpsI GAGTC 5 cut(s) 1009, 1650, 1666, 1675, 1741
Ppu21I YACGTR 1 cut(s) 2326
PpuMI RGGWCCY 2 cut(s) 1228, 1573
PscI ACATGT 4 cut(s) 607, 2015, 2055, 2242
PshAI GACNNNNGTC 1 cut(s) 2256
Psp124BI GAGCTC 1 cut(s) 1391
Psp1406I AACGTT 1 cut(s) 378
Psp5II RGGWCCY 2 cut(s) 1228, 1573
Psp6I CCWGG 2 cut(s) 1095, 2206
PspGI CCWGG 2 cut(s) 1095, 2206
PspN4I GGNNCC 5 cut(s) 844, 1094, 1229, 1575, 2640
PspPI GGNCC 5 cut(s) 458, 677, 916, 1228, 1573
PspPPI RGGWCCY 2 cut(s) 1228, 1573
PsrI GAACNNNNNNTAC 2 cut(s) 1095, 1127
PstI CTGCAG 2 cut(s) 553, 2052
PstNI CAGNNNCTG 1 cut(s) 1424
PsuI RGATCY 2 cut(s) 751, 1252
PvuII CAGCTG 1 cut(s) 1450
RsaI GTAC 6 cut(s) 64, 199, 316, 1212, 1874, 2054
RsaNI GTAC 6 cut(s) 63, 198, 315, 1211, 1873, 2053
RseI CAYNNNNRTG 1 cut(s) 2196
SacI GAGCTC 1 cut(s) 1391
SatI GCNGC 3 cut(s) 1025, 2048, 2396
Sau3AI GATC 5 cut(s) 112, 751, 1252, 1444, 2133
Sau96I GGNCC 5 cut(s) 458, 677, 916, 1228, 1573
SchI GAGTC 5 cut(s) 1010, 1650, 1666, 1675, 1741
ScrFI CCNGG 3 cut(s) 756, 1097, 2208
SduI GDGCHC 4 cut(s) 78, 1391, 2193, 2643
SfaNI GCATC 4 cut(s) 518, 1945, 2153, 2497
SfcI CTRYAG 3 cut(s) 549, 2048, 2377
SinI GGWCC 4 cut(s) 458, 677, 1228, 1573
SmiMI CAYNNNNRTG 1 cut(s) 2196
SmlI CTYRAG 5 cut(s) 1294, 1514, 1919, 2072, 2648
SmoI CTYRAG 5 cut(s) 1294, 1514, 1919, 2072, 2648
SnaBI TACGTA 1 cut(s) 2326
SsiI CCGC 1 cut(s) 456
SspI AATATT 1 cut(s) 477
SspMI CTAG 5 cut(s) 132, 417, 564, 2022, 2564
SstI GAGCTC 1 cut(s) 1391
StyD4I CCNGG 3 cut(s) 754, 1095, 2206
StyI CCWWGG 2 cut(s) 357, 927
TaaI ACNGT 7 cut(s) 1052, 1215, 1767, 1777, 1887, 2102, 2195
TaiI ACGT 6 cut(s) 15, 381, 412, 1591, 2328, 2594
TaqI TCGA 3 cut(s) 714, 2136, 2577
TaqII GACCGA 1 cut(s) 2246
TatI WGTACW 4 cut(s) 62, 197, 1872, 2052
TfiI GAWTC 4 cut(s) 436, 829, 1133, 1993
TscAI CASTG 8 cut(s) 175, 316, 468, 1782, 2041, 2190, 2198, 2431
TseFI GTSAC 1 cut(s) 1401
TseI GCWGC 3 cut(s) 1024, 2047, 2395
Tsp45I GTSAC 1 cut(s) 1401
TspDTI ATGAA 6 cut(s) 565, 636, 713, 2241, 2445, 2558
TspGWI ACGGA 2 cut(s) 690, 1799
TspRI CASTG 8 cut(s) 175, 316, 468, 1782, 2041, 2190, 2198, 2431
Van91I CCANNNNNTGG 1 cut(s) 2339
Vha464I CTTAAG 1 cut(s) 1919
VneI GTGCAC 2 cut(s) 74, 2189
VpaK11BI GGWCC 4 cut(s) 458, 677, 1228, 1573
XagI CCTNNNNNAGG 1 cut(s) 330
XapI RAATTY 9 cut(s) 164, 246, 428, 572, 628, 691, 865, 1526, 2269
XbaI TCTAGA 1 cut(s) 416
XceI RCATGY 5 cut(s) 611, 2019, 2059, 2131, 2246
XcmI CCANNNNNNNNNTGG 2 cut(s) 1708, 2314
XmnI GAANNNNTTC 5 cut(s) 720, 816, 868, 937, 1178
XspI CTAG 5 cut(s) 132, 417, 564, 2022, 2564
ZraI GACGTC 1 cut(s) 410
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.