RchiOBHm_Chr5g0011691

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000058
Physical Location & Seq
Forward (+)
7765172 .. 7769375
4204 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ29231

Sequence Viewer

Length: 3180 bp
ATGGAAAGAATTACTTGGTTCTTCCTGGCCGTGGTTAGCTGCTTAACCATGGCAGCAGCACAAACCAATAGTAATCTCACCACAGACAAGTATGCTCTTCTTGCTCTCAAAGCCTGTATCACCAGTGATCCGCAGAACATTATTTTCACCAACTGGTCAACCACCACCCCTGTTTGCAATTGGGTTGGTGTCACTTGTGGTGCACGCCATCATCGAGTCGCAAGCCTAAACCTCTCTTACATGGGACTCACAAGCACCATTCCTCCGGAACTTGGCAACCTTTCATTTCTTGTTAGGCTAAGCTTTAAAAATAATAGTTTTCACGGTACCTTGCCTCCAGGGTTGGCTCGTCTGCGGAGATTAAAGTTCATTACCTTTGGTTTCAACAACTTTATGGGTATCATTCCGTCATGGTTCGGGTCCTTATCAAAACTTCAAGCCTTTTATTTGTATGAACTTCCGAATGAGATTGGCAATTTGGATCAATTAGAAGAATTGTATGTGCAAAACAATGCCTTACAAGGGCCTCTTCCTATGGTTGTCTTCAACATGTCGTCTTTAACAACTTTGACTTTCTTTGGAAACAACTTGACTGGTAGTCTTCCGGACAATATATGTCAATATCTTCCGAGCATTCAAACCTTGAGTTTGTCAAAAAACCAACTTGTCGGTCCACTCTCATCCAAATGGTCGCAATGCAAACAACTTCTTTCATTAGAATTGGGGATGAATACTTTCAGTGGAAGCATACCCACCAATATTGCCAATTTAACCCAAATACAGCAGATTGTCCTTCGCACAAACTATTTGACAGGTACTATACCACATGAGATTGGTTATCTTCCGAATTTGGAGGCATTGAGCCTCGGAACTAATAATCTCAATGGCGTCATCCCATTTCCAATTTTCAATATTTCCACTATAACATTATTAGATCTTACTGCTAATGATCTCTTAGGTAGCCTCCCAACAAATATAGGCCTTGAGCTTCCAAACCTACTAGAGCTCTATCTAGGAGGAAATAAACTCAGCGGAGTAATCCCCAAGTCCATCTCCAATGCTTCTCAGCTCACGATCATAGATCTGGGAGAAAACTTCCTTTCCGGCTTTATTCCTAGCACGCTATGTACCTTAACAAAGCTTGAGGTGCTTTCCTTATACCAGAATAATTTAACCCTTGATACTTCTATTCCAGATGTAGATATTCTCTCTTGTCTGCCAAATCTTAAAAAATTGGTAGAATTCCAAATCATAAACAATCCATTAAATGCCAAACTTCCGATTTCCTTTTGGAATTTCTCTACATCACTTCACATTGTCAAACTAGGGAATTGCAAAATGAGAGGTAACATCCCCAATGAGATAGGCCACTTGAGCAGCTTGATACACTTAGATCTGGGAGAAAATGAACTAAGTGGACCAGTTCCGACCTCAATGGGAAGATTGCAAAACCTCCAAATTTTGGATTTGAGTGGTAACGAATTGCAAGGACACATTCCAGATGAGCTTTGTCAACTGAACCATCTTGGTGAGTTATCATTGTATGGGAATCAACTTTCAGGTTCAATACCTTCATGCTTGGGTAATCTAACCGCAACCCTAAGAAATCTATTATTAGGGTCTAATATGTTGAATCTCTCAATACCATCTACCTTGTGGAGACTCACAGATATCTTGGAATTAGACTTATCATCCAATTCACTAATTGGACCTGTCTCGGAAGGTGTTGGTAATTTGAAAGTTGCCACCCTTATAGAGTTATCAAACAACCAATTCTCTGGTAGTATACCAAACAGCATTGGGAGCCTTCAGAATTTGGTCCATCTCTCTTTGGCAAATAATAATTTACAAGGACTAATTCCAAGTTCAGTTGGCAAGTCGATCAGCTTGGAATTTTTGGATTTATCCATAAACAATTTGTCAGGAGTGATTCCCAAGTCTCTTGAATCACTCTCATATCTCAAGTATCTGAATTTGTCTTTCAATAAACTCAAAGGAGAAATTCCAACAGGCGGACCTTTCAAAAACTTTTCTGCTCAATCTTTTGTTTCGAACCATGGACTCTGTGGTGCATCCCAATTTCATGTTCCACCATGTAAAAGGAAAACTAGCAGATCTATCTTGAAATATGTCATTCCAGGGATCTTGTCACCGATGCTTCTTTTGACCATCTTAATTTGGATGGTCATGTTATGCAGAAAAAAGGATGTGGAAGCTCCAACAGAGACTGCTCTTTTGGCTCAACTTGAATGGAAAAGAGTTTCATACAAAGAAATTGCTAGTGCGACAAATGGATTCAATCTAAGAAACTTACTTGGGAGGGGGGCTTTTGGTTCAGTGTATAGAGGAAGACTGTCAGATGGAATAGATGTTGCTATAAAGGTTTTTAATTCAGAGACAGAAAGGGCATTTACAAGTTTTGAGGTTGAATGTGAAATGCTAAGCAATCTTCGTCACCGAAATCTTGTCAAAGTCATTAGTTGCTGCAGTGAAATTGATTTCAAAGCTCTTATACTGGGTTTCATGCCTAATGGGAGCTTGGAAAAGTGGTTGTATTCTCAGAATTGTTCTTTGAACATGCGGCAGAGGTTGGATATAATGATAGATGTTGCATCGGCACTGGAGTATCTCCATCATGGTTATGATGTATCTATTGTCCATTGTGATTTGAAGCCAAGCAATATACTACTAGATGATGAAATGGGTGCACATGTTTCTGATTTTGGCATTGCAAAATTCCTAAATGGAGGAGATTCTATGACTCAAACCATGACCCTAGCCACAATTGGGTATATGGCTCCAGAGTATGGAATGGAAGGAAAAGTTTCGAGAAAGGGGGATGTGTATAGTTTTGGTATTGTAGTAATGGAAACATTCACAAGAAGGAATCCAACAGATGAAATGTTTGTTGGGGATATGAGTTTAAAGCAATGGGTTGCGAATTCACTATATCAAGATGCAATAGTTGATGTTGTTGATGCCAAGCTACTTGGGACAGAGGAAGATCATGATTTTGTGGGCAAGAGAGAATGTTTATCATCCATTATGACATTAGCTCTTGGTTGTTCAGCAGAATCACCAGAAGAGAGGATAAATATGCAAGAGGCTCTAGCCACACTCAATAAAATCAAGATCAAGCTTATAAAGGAAGTTCCAGGAAGTATGCTTCCAAAGAAGTGA

Protein Analysis

1059

Amino Acids

116.27

Weight (kDa)

6.03

Isoelectric Point (pI)

32.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 27 - 66 3.1e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 299 - 467 3.2e-06 Leucine-rich repeat region
LRR_8 PF13855 331 - 391 2.3e-07 Leucine rich repeat
LRR_14 PF23598 432 - 562 6.2e-09 Leucine-rich repeat region
LRR_8 PF13855 455 - 495 9.8e-06 Leucine rich repeat
LRR_14 PF23598 561 - 664 1.7e-06 Leucine-rich repeat region
LRR_8 PF13855 605 - 664 5.1e-07 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 768 - 1038 2e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 768 - 1038 1.5e-42 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3143
Acc65I GGTACC 1 cut(s) 326
AccB1I GGYRCC 1 cut(s) 326
AccB7I CCANNNNNTGG 2 cut(s) 1462, 2807
AccI GTMKAC 1 cut(s) 1786
AccIII TCCGGA 2 cut(s) 265, 604
AciI CCGC 6 cut(s) 131, 355, 1032, 1593, 2013, 2581
AclWI GGATC 3 cut(s) 122, 489, 2150
AcoI YGGCCR 1 cut(s) 27
AcuI CTGAAG 1 cut(s) 1793
AcyI GRCGYC 1 cut(s) 888
AfaI GTAC 3 cut(s) 328, 817, 1129
AfiI CCNNNNNNNGG 7 cut(s) 31, 272, 522, 1462, 2012, 2787, 2807
AflIII ACRYGT 2 cut(s) 549, 2710
AhdI GACNNNNNGTC 1 cut(s) 597
AjnI CCWGG 4 cut(s) 24, 337, 2137, 3154
AjuI GAANNNNNNNTTGG 4 cut(s) 2070, 2102, 2892, 2924
Alw21I GWGCWC 3 cut(s) 205, 1008, 2710
Alw26I GTCTC 5 cut(s) 1654, 1720, 1944, 2219, 2390
Alw44I GTGCAC 2 cut(s) 201, 2706
AlwI GGATC 3 cut(s) 122, 489, 2150
AlwNI CAGNNNCTG 1 cut(s) 2228
Aor13HI TCCGGA 2 cut(s) 265, 604
AoxI GGCC 4 cut(s) 27, 524, 979, 1366
ApaLI GTGCAC 2 cut(s) 201, 2706
ApeKI GCWGC 5 cut(s) 39, 53, 56, 1377, 2484
ArsI GACNNNNNNTTYG 2 cut(s) 2218, 2250
Asp700I GAANNNNTTC 2 cut(s) 734, 2824
Asp718I GGTACC 1 cut(s) 326
AspS9I GGNCC 7 cut(s) 420, 524, 671, 1418, 1709, 1819, 2015
AsuHPI GGTGA 7 cut(s) 70, 112, 139, 1541, 2142, 2447, 3069
AsuII TTCGAA 1 cut(s) 2051
AvaII GGWCC 6 cut(s) 420, 671, 1418, 1709, 1819, 2015
BaeGI GKGCMC 2 cut(s) 205, 2710
BaeI ACNNNNGTAYC 2 cut(s) 2609, 2642
BanI GGYRCC 1 cut(s) 326
BanII GRGCYC 1 cut(s) 1008
BbsI GAAGAC 3 cut(s) 535, 593, 2356
Bbv12I GWGCWC 3 cut(s) 205, 1008, 2710
BbvI GCAGC 5 cut(s) 26, 65, 68, 1389, 2471
BccI CCATC 9 cut(s) 216, 1058, 1530, 1654, 1830, 2176, 2177, 2354, 2640
BceAI ACGGC 1 cut(s) 14
BciT130I CCWGG 4 cut(s) 26, 339, 2139, 3156
BcoDI GTCTC 5 cut(s) 1654, 1720, 1944, 2219, 2390
BfaI CTAG 9 cut(s) 1001, 1013, 1116, 1325, 2109, 2280, 2690, 2777, 3110
BfmI CTRYAG 1 cut(s) 2485
BglII AGATCT 4 cut(s) 934, 1081, 1393, 2114
BisI GCNGC 6 cut(s) 40, 54, 57, 1378, 2485, 2582
BlpI GCTNAGC 2 cut(s) 299, 2441
BlsI GCNGC 6 cut(s) 41, 55, 58, 1379, 2486, 2583
Bme1390I CCNGG 4 cut(s) 26, 339, 2139, 3156
Bme18I GGWCC 6 cut(s) 420, 671, 1418, 1709, 1819, 2015
BmeRI GACNNNNNGTC 1 cut(s) 597
BmgT120I GGNCC 7 cut(s) 420, 524, 671, 1418, 1709, 1819, 2015
BmiI GGNNCC 4 cut(s) 328, 421, 1805, 2799
BmrFI CCNGG 4 cut(s) 26, 339, 2139, 3156
BmrI ACTGGG 1 cut(s) 2525
BmsI GCATC 5 cut(s) 2081, 2145, 2621, 2947, 2968
BmuI ACTGGG 1 cut(s) 2525
BpiI GAAGAC 3 cut(s) 535, 593, 2356
BpmI CTGGAG 3 cut(s) 321, 2642, 2784
Bpu1102I GCTNAGC 2 cut(s) 299, 2441
Bpu14I TTCGAA 1 cut(s) 2051
BpuEI CTTGAG 5 cut(s) 664, 1004, 1163, 1393, 1946
BsaHI GRCGYC 1 cut(s) 888
BsaJI CCNNGG 6 cut(s) 30, 48, 338, 865, 2056, 2138
BsaWI WCCGGW 2 cut(s) 265, 604
BsaXI ACNNNNNCTCC 4 cut(s) 247, 277, 319, 349
Bsc4I CCNNNNNNNGG 7 cut(s) 31, 272, 522, 1462, 2012, 2787, 2807
Bse1I ACTGG 6 cut(s) 123, 158, 598, 1421, 2520, 2625
Bse3DI GCAATG 3 cut(s) 701, 2727, 2936
BseAI TCCGGA 2 cut(s) 265, 604
BseBI CCWGG 4 cut(s) 26, 339, 2139, 3156
BseDI CCNNGG 6 cut(s) 30, 48, 338, 865, 2056, 2138
BseLI CCNNNNNNNGG 7 cut(s) 31, 272, 522, 1462, 2012, 2787, 2807
BseMI GCAATG 3 cut(s) 701, 2727, 2936
BseMII CTCAG 3 cut(s) 1042, 1079, 2573
BseNI ACTGG 6 cut(s) 123, 158, 598, 1421, 2520, 2625
BseRI GAGGAG 1 cut(s) 2763
BseSI GKGCMC 2 cut(s) 205, 2710
BseXI GCAGC 5 cut(s) 26, 65, 68, 1389, 2471
BshFI GGCC 4 cut(s) 29, 526, 981, 1368
BshNI GGYRCC 1 cut(s) 326
BsiHKAI GWGCWC 3 cut(s) 205, 1008, 2710
BsiSI CCGG 3 cut(s) 266, 605, 1104
BslFI GGGAC 2 cut(s) 258, 3007
BslI CCNNNNNNNGG 7 cut(s) 31, 272, 522, 1462, 2012, 2787, 2807
BsmAI GTCTC 5 cut(s) 1654, 1720, 1944, 2219, 2390
BsmFI GGGAC 2 cut(s) 258, 3007
BsmI GAATGC 1 cut(s) 633
BsnI GGCC 4 cut(s) 29, 526, 981, 1368
Bsp119I TTCGAA 1 cut(s) 2051
Bsp1286I GDGCHC 3 cut(s) 205, 1008, 2710
Bsp13I TCCGGA 2 cut(s) 265, 604
Bsp1720I GCTNAGC 2 cut(s) 299, 2441
Bsp19I CCATGG 2 cut(s) 48, 2056
BspACI CCGC 6 cut(s) 131, 355, 1032, 1593, 2013, 2581
BspANI GGCC 4 cut(s) 29, 526, 981, 1368
BspCNI CTCAG 3 cut(s) 1041, 1078, 2572
BspEI TCCGGA 2 cut(s) 265, 604
BspHI TCATGA 1 cut(s) 3007
BspLI GGNNCC 4 cut(s) 328, 421, 1805, 2799
BspMAI CTGCAG 1 cut(s) 2489
BspPI GGATC 3 cut(s) 122, 489, 2150
BspQI GCTCTTC 1 cut(s) 102
BspT104I TTCGAA 1 cut(s) 2051
BspT107I GGYRCC 1 cut(s) 326
BsrDI GCAATG 3 cut(s) 701, 2727, 2936
BsrI ACTGG 6 cut(s) 123, 158, 598, 1421, 2520, 2625
BssECI CCNNGG 6 cut(s) 30, 48, 338, 865, 2056, 2138
BssNAI GTATAC 1 cut(s) 1787
BssNI GRCGYC 1 cut(s) 888
BssT1I CCWWGG 2 cut(s) 48, 2056
Bst1107I GTATAC 1 cut(s) 1787
Bst2UI CCWGG 4 cut(s) 26, 339, 2139, 3156
Bst4CI ACNGT 2 cut(s) 326, 2355
Bst6I CTCTTC 3 cut(s) 102, 534, 3078
BstACI GRCGYC 1 cut(s) 888
BstBI TTCGAA 1 cut(s) 2051
BstC8I GCNNGC 3 cut(s) 205, 223, 1121
BstDSI CCRYGG 3 cut(s) 30, 48, 2056
BstMAI GTCTC 5 cut(s) 1654, 1720, 1944, 2219, 2390
BstMWI GCNNNNNNNGC 6 cut(s) 101, 110, 1147, 1374, 1803, 2237
BstNI CCWGG 4 cut(s) 26, 339, 2139, 3156
BstNSI RCATGY 3 cut(s) 553, 2581, 2714
BstSCI CCNGG 4 cut(s) 24, 337, 2137, 3154
BstSFI CTRYAG 1 cut(s) 2485
BstSLI GKGCMC 2 cut(s) 205, 2710
BstV1I GCAGC 5 cut(s) 26, 65, 68, 1389, 2471
BstV2I GAAGAC 3 cut(s) 535, 593, 2356
BstX2I RGATCY 5 cut(s) 934, 1081, 1393, 2114, 2142
BstXI CCANNNNNNTGG 1 cut(s) 1778
BstYI RGATCY 5 cut(s) 934, 1081, 1393, 2114, 2142
BstZ17I GTATAC 1 cut(s) 1787
BsuRI GGCC 4 cut(s) 29, 526, 981, 1368
BtgI CCRYGG 3 cut(s) 30, 48, 2056
BtsI GCAGTG 1 cut(s) 2494
BtsIMutI CAGTG 5 cut(s) 130, 745, 2343, 2494, 2618
Cac8I GCNNGC 3 cut(s) 205, 223, 1121
CaiI CAGNNNCTG 1 cut(s) 2228
CciI TCATGA 1 cut(s) 3007
Cfr13I GGNCC 7 cut(s) 420, 524, 671, 1418, 1709, 1819, 2015
CseI GACGC 1 cut(s) 877
Csp6I GTAC 3 cut(s) 327, 816, 1128
CspCI CAANNNNNGTGG 2 cut(s) 742, 777
CviQI GTAC 3 cut(s) 327, 816, 1128
DraI TTTAAA 2 cut(s) 307, 2925
DriI GACNNNNNGTC 1 cut(s) 597
EaeI YGGCCR 1 cut(s) 27
Eam1104I CTCTTC 3 cut(s) 102, 534, 3078
Eam1105I GACNNNNNGTC 1 cut(s) 597
EarI CTCTTC 3 cut(s) 102, 534, 3078
EciI GGCGGA 1 cut(s) 2028
Ecl136II GAGCTC 1 cut(s) 1006
Eco130I CCWWGG 2 cut(s) 48, 2056
Eco147I AGGCCT 1 cut(s) 981
Eco24I GRGCYC 1 cut(s) 1008
Eco32I GATATC 1 cut(s) 1672
Eco47I GGWCC 6 cut(s) 420, 671, 1418, 1709, 1819, 2015
Eco53kI GAGCTC 1 cut(s) 1006
Eco57I CTGAAG 1 cut(s) 1793
EcoICRI GAGCTC 1 cut(s) 1006
EcoO109I RGGNCCY 2 cut(s) 420, 524
EcoRI GAATTC 2 cut(s) 1241, 2941
EcoRII CCWGG 4 cut(s) 24, 337, 2137, 3154
EcoRV GATATC 1 cut(s) 1672
EcoT14I CCWWGG 2 cut(s) 48, 2056
EcoT38I GRGCYC 1 cut(s) 1008
ErhI CCWWGG 2 cut(s) 48, 2056
FalI AAGNNNNNCTT 3 cut(s) 30, 513, 545
FaqI GGGAC 2 cut(s) 258, 3007
FblI GTMKAC 1 cut(s) 1786
Fnu4HI GCNGC 6 cut(s) 40, 54, 57, 1378, 2485, 2582
FriOI GRGCYC 1 cut(s) 1008
Fsp4HI GCNGC 6 cut(s) 40, 54, 57, 1378, 2485, 2582
FspBI CTAG 9 cut(s) 1001, 1013, 1116, 1325, 2109, 2280, 2690, 2777, 3110
GluI GCNGC 6 cut(s) 40, 54, 57, 1378, 2485, 2582
GsuI CTGGAG 3 cut(s) 321, 2642, 2784
HaeIII GGCC 4 cut(s) 29, 526, 981, 1368
HapII CCGG 3 cut(s) 266, 605, 1104
HgaI GACGC 1 cut(s) 877
Hin1I GRCGYC 1 cut(s) 888
HincII GTYRAC 2 cut(s) 159, 1514
HindII GTYRAC 2 cut(s) 159, 1514
HindIII AAGCTT 3 cut(s) 301, 1139, 3137
HpaII CCGG 3 cut(s) 266, 605, 1104
HphI GGTGA 7 cut(s) 70, 112, 139, 1541, 2142, 2447, 3069
Hpy166II GTNNAC 7 cut(s) 159, 203, 674, 1418, 1514, 1787, 2708
Hpy8I GTNNAC 7 cut(s) 159, 203, 674, 1418, 1514, 1787, 2708
HpyAV CCTTC 6 cut(s) 803, 1581, 1715, 1817, 2810, 2877
HpyCH4III ACNGT 2 cut(s) 326, 2355
HpyF10VI GCNNNNNNNGC 6 cut(s) 101, 110, 1147, 1374, 1803, 2237
Hsp92I GRCGYC 1 cut(s) 888
Kpn2I TCCGGA 2 cut(s) 265, 604
KpnI GGTACC 1 cut(s) 330
LguI GCTCTTC 1 cut(s) 102
LmnI GCTCC 4 cut(s) 1803, 2221, 2535, 2803
Lsp1109I GCAGC 5 cut(s) 26, 65, 68, 1389, 2471
LweI GCATC 5 cut(s) 2081, 2145, 2621, 2947, 2968
MaeI CTAG 9 cut(s) 1001, 1013, 1116, 1325, 2109, 2280, 2690, 2777, 3110
MaeIII GTNAC 5 cut(s) 190, 1346, 1475, 2148, 2453
MfeI CAATTG 2 cut(s) 178, 2784
MflI RGATCY 5 cut(s) 934, 1081, 1393, 2114, 2142
MhlI GDGCHC 3 cut(s) 205, 1008, 2710
MlyI GAGTC 5 cut(s) 225, 240, 1656, 2055, 2755
MmeI TCCRAC 5 cut(s) 1451, 2030, 2243, 2571, 2915
MroI TCCGGA 2 cut(s) 265, 604
MroXI GAANNNNTTC 2 cut(s) 734, 2824
MslI CAYNNNNRTG 3 cut(s) 685, 1527, 2640
MspA1I CMGCKG 1 cut(s) 1032
MspI CCGG 3 cut(s) 266, 605, 1104
MspR9I CCNGG 4 cut(s) 26, 339, 2139, 3156
MunI CAATTG 2 cut(s) 178, 2784
Mva1269I GAATGC 1 cut(s) 633
MvaI CCWGG 4 cut(s) 26, 339, 2139, 3156
MwoI GCNNNNNNNGC 6 cut(s) 101, 110, 1147, 1374, 1803, 2237
NcoI CCATGG 2 cut(s) 48, 2056
NlaIV GGNNCC 4 cut(s) 328, 421, 1805, 2799
NmuCI GTSAC 3 cut(s) 190, 2148, 2453
NspI RCATGY 3 cut(s) 553, 2581, 2714
NspV TTCGAA 1 cut(s) 2051
PagI TCATGA 1 cut(s) 3007
PceI AGGCCT 1 cut(s) 981
PciI ACATGT 2 cut(s) 549, 2710
PciSI GCTCTTC 1 cut(s) 102
PcsI WCGNNNNNNNCGW 1 cut(s) 211
PctI GAATGC 1 cut(s) 633
PdmI GAANNNNTTC 2 cut(s) 734, 2824
PfeI GAWTC 8 cut(s) 1549, 1633, 1930, 1946, 2295, 2753, 2887, 3074
PflMI CCANNNNNTGG 2 cut(s) 1462, 2807
PfoI TCCNGGA 1 cut(s) 3154
PkrI GCNGC 6 cut(s) 41, 55, 58, 1379, 2486, 2583
PleI GAGTC 5 cut(s) 224, 240, 1656, 2055, 2755
PpsI GAGTC 5 cut(s) 224, 240, 1656, 2055, 2755
PpuMI RGGWCCY 1 cut(s) 420
PscI ACATGT 2 cut(s) 549, 2710
PsiI TTATAA 1 cut(s) 3143
Psp124BI GAGCTC 1 cut(s) 1008
Psp5II RGGWCCY 1 cut(s) 420
Psp6I CCWGG 4 cut(s) 24, 337, 2137, 3154
PspGI CCWGG 4 cut(s) 24, 337, 2137, 3154
PspN4I GGNNCC 4 cut(s) 328, 421, 1805, 2799
PspPI GGNCC 7 cut(s) 420, 524, 671, 1418, 1709, 1819, 2015
PspPPI RGGWCCY 1 cut(s) 420
PstI CTGCAG 1 cut(s) 2489
PstNI CAGNNNCTG 1 cut(s) 2228
PsuI RGATCY 5 cut(s) 934, 1081, 1393, 2114, 2142
RsaI GTAC 3 cut(s) 328, 817, 1129
RsaNI GTAC 3 cut(s) 327, 816, 1128
RseI CAYNNNNRTG 3 cut(s) 685, 1527, 2640
SacI GAGCTC 1 cut(s) 1008
SapI GCTCTTC 1 cut(s) 102
SatI GCNGC 6 cut(s) 40, 54, 57, 1378, 2485, 2582
Sau96I GGNCC 7 cut(s) 420, 524, 671, 1418, 1709, 1819, 2015
SchI GAGTC 5 cut(s) 225, 240, 1656, 2055, 2755
ScrFI CCNGG 4 cut(s) 26, 339, 2139, 3156
SduI GDGCHC 3 cut(s) 205, 1008, 2710
SfaNI GCATC 5 cut(s) 2081, 2145, 2621, 2947, 2968
SfcI CTRYAG 1 cut(s) 2485
SfuI TTCGAA 1 cut(s) 2051
SinI GGWCC 6 cut(s) 420, 671, 1418, 1709, 1819, 2015
SmiMI CAYNNNNRTG 3 cut(s) 685, 1527, 2640
SmlI CTYRAG 5 cut(s) 643, 983, 1142, 1372, 1961
SmoI CTYRAG 5 cut(s) 643, 983, 1142, 1372, 1961
SseBI AGGCCT 1 cut(s) 981
SsiI CCGC 6 cut(s) 131, 355, 1032, 1593, 2013, 2581
SspI AATATT 2 cut(s) 760, 913
SspMI CTAG 9 cut(s) 1001, 1013, 1116, 1325, 2109, 2280, 2690, 2777, 3110
SstI GAGCTC 1 cut(s) 1008
StuI AGGCCT 1 cut(s) 981
StyD4I CCNGG 4 cut(s) 24, 337, 2137, 3154
StyI CCWWGG 2 cut(s) 48, 2056
TaaI ACNGT 2 cut(s) 326, 2355
TaqI TCGA 4 cut(s) 214, 1880, 2051, 2828
TaqII GACCGA 1 cut(s) 659
TauI GCSGC 1 cut(s) 2584
TfiI GAWTC 8 cut(s) 1549, 1633, 1930, 1946, 2295, 2753, 2887, 3074
TscAI CASTG 5 cut(s) 130, 745, 2343, 2494, 2625
TseFI GTSAC 3 cut(s) 190, 2148, 2453
TseI GCWGC 5 cut(s) 39, 53, 56, 1377, 2484
Tsp45I GTSAC 3 cut(s) 190, 2148, 2453
TspGWI ACGGA 1 cut(s) 396
TspRI CASTG 5 cut(s) 130, 745, 2343, 2494, 2625
Van91I CCANNNNNTGG 2 cut(s) 1462, 2807
VneI GTGCAC 2 cut(s) 201, 2706
VpaK11BI GGWCC 6 cut(s) 420, 671, 1418, 1709, 1819, 2015
XceI RCATGY 3 cut(s) 553, 2581, 2714
XcmI CCANNNNNNNNNTGG 2 cut(s) 1653, 2063
XmiI GTMKAC 1 cut(s) 1786
XmnI GAANNNNTTC 2 cut(s) 734, 2824
XspI CTAG 9 cut(s) 1001, 1013, 1116, 1325, 2109, 2280, 2690, 2777, 3110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.