Rw3G025270

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
Physical Location & Seq
Reverse (-)
33508556 .. 33513497
4942 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G025270.1

Sequence Viewer

Length: 3369 bp
ATGGAGAGAGTTACTTGGTTCTTCCTAGCATACTTAATCGGTTGTACGGCTGCGAGCTGCTTAACTATGGTAGCACAAACCAACCTCAACATCACCACAGACCGATCTGCTCTTCTTGCTCTCAAAGCCCATATCACCAGTGACCCTCAAAACATGATCTTCACTAACTGGTCAACCACCACCCCTGTTTGCAACTGGGTTGGAGTCACTTGTGGTGCACGCCATCATCGAATCGCAGAGTTGAACCTCTCTTACTTTGGTCTCAAAGGCACCATTCCTCCGGAGCTTGGCAACTTATCTTTTCTTGTTGATCTGGACTTCAGAAATAATAGTTTCCATGGTACCTTGCCTCAAGAATTGGCTCATTTGCATCGGTTGAAATTTATTAAATTGGGATACAACAAGTTCACGGGAGTCATTCCGTCATGGTTTGGGTTCTTGTCCAAACTTCAAGTATTCAGATTGTTTGGTAATCAATTTTCAGGTTTCATACCAGCTACTATCTTCAACCTATCTGCTCTGCAAATAATTGATCTGAGATATAACCAACTGTCAGGTAGAATACCCAGAGAAATCGGGAATCTAACAATGTTGAAGGAGATCTACCTTGATGATAATAATTTTAAAGAGATTCCAAATGAGATCGGCACCTTGAATCAACTAGAAAAGTTGTATATGCAAGAAAATGCCTTAAAAGGGCATTTTCCTATGGGTGTCTTCAATATGTCATCTTTGACTACTGTAACTTTCTATGAAAACAACTTGAATGGTAGAATTCCGGACAATATATGTCAACATCTTCCAAATATTCAAGCGTTGAATTTAGGTATCAATCAGTTTGATGGTCCACTTCCATCCAAGTTATGGCAATGCAAACAACTTCTTACTTTGGAGTTGAGGGATAACATGTTTAGTGGAAGCATACCTAAAGAAATTGGGAACTTAACTCAGATAAAGAAGATTAGCCTTGTCACAAACAGCCTGACAGGTACTATACCATATGAGTTTGGTTATCTTCCAAATTTAGAGGTATTGGTGCTCTATGAAAATGATCTAAATGGCCATATCCCATCCTCAATCTTCAATATGTCCACAATAATAGCATTAGATATTGGCCTCAATCAGCTTTCAGGTAGCCTCCCAGCAAACATAGGCCTTGCGCTTCCAAACCTAGAAGAGTTTAGAGCAGGAGGGAATCACCTCAGTGGAGTAATCCCCAAATCCATCTCCAATGCTTCTGAGCTTCAGATTCTAAGTCTGGGAGGTAACTCTTTTTCTGGATTTATTCCAAGAACTCTGTGCCTCTTGACAAACCTTGAATGGCTCGCATTGTTCACCAATAATTTGACCATTGATACCTCTACTTCAGAAGTTAATATTTTGTCTTGTCTGGCAAATCTTAGAAATTTGAGGTATTTAGCCTTCTCAAGCAATCCATTAAATACCAAGCTTCCGGTTGTCTTCAATAATTTCTCTGCATCACTTCAAAATCTTTATTTAAAAGATTGCAGCTTGAGAGGTAACATCCCCAGTGATATGGGCAACTTGAGTAGCTTGATAGTTTTATCCCTTGGACACAATCAATTTACCGGGCCAATTCCAAGCTCAATGGGAAGACTACTGAATCTTCAAGGTTTGTATATGTATAATAACACATTGCAAGGATACATTCCAGATGAACTTTGTCAACTAGAAGGCTTATGTGTTTTGGATTTAGGTGGGAATCAACTCTCTGGTTATGTACCTTCCTGCTTGGGTAATCTAACAGCATCTCTAAGAACTCTGTACTTAGACTCCAATTTGTTGAATTCCACAATACCATCTACCTTGTGGGGACTTACAGATATCTTGCAAATAGACTTGTCATCCAATTCTCTAATTGGACCTCTATCAGATGGTGTTGGTAATTTGAAAGTTGCTACACACATAAATGTATCATACAACCAATTATCTGGTAGTATAACGAGCAGCGTTGGGAGTTTATTGAATTTGGTCAATCTCTCTTTAGCACATAATAATCTAGAAGGCCTTATTCCTAGTTCCTTTGCAACCTGCGTAAGCTTAGAACGATTGGATTTATCTCATAACAGTTTCACTGGAGTCATTCCAAAGTCTCTAGAAGCACTCTCATATCTCAAGTATCTGAATCTGTCTTCCAACAGCCTCCAAGGAGAAATTCCAACAGGTGGTCCTTTCAAAAACTTCTCTACTGAATCATTTGTTTTAAATCAAGGACTCTGTGGTGCATCCCAATTTCAAGTTCCACCATGCAAAAGAAAAACTAGAATGTCTATCTTGAAATATGTTATTCCGGAGATCTTGTCCTCAATGCTTCTAGCGACGGCCATATTTTGGATGTTGATGTTCTGCAGAAAAAAGAATGCGACGAATGCTGCAGCACATACTATCTTGACGCCACAAGTTTTATGGAGAAGAGTTTCATATCTAGAGCTCTTAAGTGCGACAGATGGATTCAATGAGAGCAACTTACTTGGTACTGGGGGTTTTGGCTCAGTATATAAAGGAACATTGTCAGATGGGATAGAGGTTGCAATAAAGGTTTTCAATTTGGAGTTAGAAGGGGCATTTAAAAGTTTTGAGGTTGAATGTGAAGTGCTAAGTAATGTTCATCACCGAAATCTTGTCAAAGTCATTAGTTGCTGCAGTCAAATTGATTTCAAGGGTCTTGTATTGAATTACATGCCTAATGGGAGCCTTGAGAAGTGGTTGTATTCTCAGAATTCTTCTTTGAACATAATGCAGAGGTTGGATATAATGATAGATGTTGCATCAGCATTGGAGTACCTTCATCAGGGTTATGAAGTACCTATTGTCCATTGTGATTTGAAGCCAAGCAACATCCTACTAGATGATAATATGGTTGCACATGTTGTTGATTTTGGTATTGCGAGACTCTTGAGTGGAGGAGATTCTATGACTCAAACCATGACCTTAGCCACAATTGGGTATATTGCTCCAGAGTATGGAATGGAAGGAATAGTGACCAGAAGAGGGGACGTGTATAGTTTTGGTATTATAGTGATGGAAACATTCACAAGAAGGAAGCCAACCGATGAGATCTTCGTTGGAGGAATGAGAATAAATCAATGGGTTACAAATTTCCTAGTTGCAGATGCGATAGTTGAAGTTGTGGATTCTACCTTACTTGGAACTAAGGAGGATCATGACTTCGTGAGCAAGGAGTGCTTATCATCTATTATGAGATTAGCTGTTGTTTGTTCAGCAGATTCACCGGAAGAGAGGATAAACATGCAAGAGGCTGTAGCCATACTTAAAACAATCAAGATCAAGTTTTCAAAGGACTCTACTGCAAGAGGTATGGTGTTGAGCCGTTGTCCTGTTTCGTAA

Protein Analysis

1122

Amino Acids

123.65

Weight (kDa)

6.0

Isoelectric Point (pI)

30.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 33 - 71 7.5e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 81 - 158 8.8e-06 Leucine-rich repeat region
LRR_8 PF13855 130 - 184 4.6e-07 Leucine rich repeat
LRR_14 PF23598 168 - 253 5.1e-09 Leucine-rich repeat region
LRR_14 PF23598 355 - 523 4.1e-07 Leucine-rich repeat region
LRR_8 PF13855 389 - 449 7.8e-06 Leucine rich repeat
LRR_14 PF23598 455 - 597 5.6e-09 Leucine-rich repeat region
LRR_8 PF13855 518 - 577 8.2e-06 Leucine rich repeat
LRR_8 PF13855 663 - 722 2.1e-11 Leucine rich repeat
Pkinase PF00069 826 - 1095 4.5e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 829 - 1095 6.1e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2060
Acc65I GGTACC 1 cut(s) 341
AccB1I GGYRCC 3 cut(s) 269, 341, 647
AccB7I CCANNNNNTGG 4 cut(s) 864, 2186, 2352, 2984
AccIII TCCGGA 3 cut(s) 280, 778, 2311
AclWI GGATC 1 cut(s) 3189
AcoI YGGCCR 2 cut(s) 1060, 2343
AcuI CTGAAG 3 cut(s) 304, 1229, 1350
AcyI GRCGYC 1 cut(s) 2414
AfaI GTAC 8 cut(s) 46, 343, 991, 1743, 1787, 2497, 2804, 2826
AfiI CCNNNNNNNGG 9 cut(s) 287, 696, 864, 2186, 2352, 2812, 2964, 2984, 3012
AflII CTTAAG 1 cut(s) 2455
AflIII ACRYGT 3 cut(s) 906, 2887, 3018
AjiI CACGTC 1 cut(s) 3019
AjuI GAANNNNNNNTTGG 4 cut(s) 2160, 2192, 2244, 2276
AleI CACNNNNGTG 1 cut(s) 1203
Alw21I GWGCWC 3 cut(s) 220, 1041, 2454
Alw26I GTCTC 3 cut(s) 266, 2118, 2905
Alw44I GTGCAC 1 cut(s) 216
AlwI GGATC 1 cut(s) 3189
Aor13HI TCCGGA 3 cut(s) 280, 778, 2311
AoxI GGCC 6 cut(s) 1060, 1114, 1153, 1592, 2026, 2343
ApaLI GTGCAC 1 cut(s) 216
ApeKI GCWGC 7 cut(s) 50, 57, 1509, 1968, 2393, 2396, 2661
Asp700I GAANNNNTTC 1 cut(s) 2437
Asp718I GGTACC 1 cut(s) 341
AspLEI GCGC 1 cut(s) 1162
AspS9I GGNCC 4 cut(s) 845, 1592, 1883, 2189
AsuC2I CCSGG 1 cut(s) 1591
AsuHPI GGTGA 6 cut(s) 85, 127, 1190, 1327, 2624, 3243
AvaII GGWCC 3 cut(s) 845, 1883, 2189
BaeGI GKGCMC 1 cut(s) 220
BalI TGGCCA 1 cut(s) 1062
BanI GGYRCC 3 cut(s) 269, 341, 647
BanII GRGCYC 1 cut(s) 2454
BarI GAAGNNNNNNTAC 4 cut(s) 587, 619, 1406, 1438
BbsI GAAGAC 4 cut(s) 709, 1453, 1621, 2145
Bbv12I GWGCWC 3 cut(s) 220, 1041, 2454
BbvI GCAGC 7 cut(s) 37, 44, 1521, 1980, 2380, 2408, 2648
BceAI ACGGC 3 cut(s) 63, 2358, 3336
BciVI GTATCC 2 cut(s) 389, 1658
BcnI CCSGG 1 cut(s) 1591
BcoDI GTCTC 3 cut(s) 266, 2118, 2905
BfmI CTRYAG 4 cut(s) 2368, 2394, 2662, 3282
BfrI CTTAAG 1 cut(s) 2455
BfuAI ACCTGC 1 cut(s) 2060
BfuI GTATCC 2 cut(s) 389, 1658
BglII AGATCT 3 cut(s) 600, 2316, 3078
BisI GCNGC 7 cut(s) 51, 58, 1510, 1969, 2394, 2397, 2662
BlsI GCNGC 7 cut(s) 52, 59, 1511, 1970, 2395, 2398, 2663
Bme1390I CCNGG 1 cut(s) 1591
Bme18I GGWCC 3 cut(s) 845, 1883, 2189
BmgBI CACGTC 1 cut(s) 3019
BmgT120I GGNCC 4 cut(s) 845, 1592, 1883, 2189
BmiI GGNNCC 4 cut(s) 271, 343, 649, 2714
BmrFI CCNGG 1 cut(s) 1591
BmrI ACTGGG 3 cut(s) 205, 1524, 2508
BmsI GCATC 6 cut(s) 379, 1487, 1778, 2255, 2798, 3124
BmuI ACTGGG 3 cut(s) 205, 1524, 2508
BpiI GAAGAC 4 cut(s) 709, 1453, 1621, 2145
BpmI CTGGAG 2 cut(s) 2118, 2961
Bpu10I CCTNAGC 1 cut(s) 2953
BpuEI CTTGAG 7 cut(s) 336, 1411, 1534, 1567, 2120, 2738, 2938
BpuMI CCSGG 1 cut(s) 1591
BsaHI GRCGYC 1 cut(s) 2414
BsaI GGTCTC 1 cut(s) 266
BsaJI CCNNGG 3 cut(s) 337, 1570, 2167
BsaWI WCCGGW 5 cut(s) 280, 778, 1453, 2311, 3253
BsaXI ACNNNNNCTCC 6 cut(s) 262, 292, 1778, 1808, 2306, 2336
Bsc4I CCNNNNNNNGG 9 cut(s) 287, 696, 864, 2186, 2352, 2812, 2964, 2984, 3012
Bse1I ACTGG 6 cut(s) 138, 173, 200, 1530, 2101, 2503
Bse3DI GCAATG 2 cut(s) 875, 1655
BseAI TCCGGA 3 cut(s) 280, 778, 2311
BseDI CCNNGG 3 cut(s) 337, 1570, 2167
BseGI GGATG 7 cut(s) 854, 1070, 1524, 1865, 2246, 2361, 2859
BseLI CCNNNNNNNGG 9 cut(s) 287, 696, 864, 2186, 2352, 2812, 2964, 2984, 3012
BseMI GCAATG 2 cut(s) 875, 1655
BseMII CTCAG 6 cut(s) 527, 962, 1216, 1230, 2526, 2750
BseNI ACTGG 6 cut(s) 138, 173, 200, 1530, 2101, 2503
BseRI GAGGAG 1 cut(s) 2940
BseSI GKGCMC 1 cut(s) 220
BseXI GCAGC 7 cut(s) 37, 44, 1521, 1980, 2380, 2408, 2648
BseYI CCCAGC 1 cut(s) 1141
BshFI GGCC 6 cut(s) 1062, 1116, 1155, 1594, 2028, 2345
BshNI GGYRCC 3 cut(s) 269, 341, 647
BsiHKAI GWGCWC 3 cut(s) 220, 1041, 2454
BsiSI CCGG 6 cut(s) 281, 779, 1454, 1590, 2312, 3254
BslFI GGGAC 2 cut(s) 1848, 3029
BslI CCNNNNNNNGG 9 cut(s) 287, 696, 864, 2186, 2352, 2812, 2964, 2984, 3012
BsmAI GTCTC 3 cut(s) 266, 2118, 2905
BsmFI GGGAC 2 cut(s) 1848, 3029
BsmI GAATGC 2 cut(s) 2386, 2395
BsnI GGCC 6 cut(s) 1062, 1116, 1155, 1594, 2028, 2345
Bso31I GGTCTC 1 cut(s) 266
Bsp1286I GDGCHC 3 cut(s) 220, 1041, 2454
Bsp13I TCCGGA 3 cut(s) 280, 778, 2311
Bsp19I CCATGG 1 cut(s) 337
BspANI GGCC 6 cut(s) 1062, 1116, 1155, 1594, 2028, 2345
BspCNI CTCAG 6 cut(s) 528, 961, 1215, 1231, 2525, 2749
BspEI TCCGGA 3 cut(s) 280, 778, 2311
BspHI TCATGA 1 cut(s) 3184
BspLI GGNNCC 4 cut(s) 271, 343, 649, 2714
BspMAI CTGCAG 3 cut(s) 2372, 2398, 2666
BspMI ACCTGC 1 cut(s) 2060
BspPI GGATC 1 cut(s) 3189
BspQI GCTCTTC 1 cut(s) 117
BspT107I GGYRCC 3 cut(s) 269, 341, 647
BspTI CTTAAG 1 cut(s) 2455
BspTNI GGTCTC 1 cut(s) 266
BsrDI GCAATG 2 cut(s) 875, 1655
BsrI ACTGG 6 cut(s) 138, 173, 200, 1530, 2101, 2503
BssECI CCNNGG 3 cut(s) 337, 1570, 2167
BssNI GRCGYC 1 cut(s) 2414
BssT1I CCWWGG 3 cut(s) 337, 1570, 2167
Bst4CI ACNGT 3 cut(s) 552, 742, 2090
Bst6I CTCTTC 5 cut(s) 117, 1170, 2428, 3004, 3252
BstACI GRCGYC 1 cut(s) 2414
BstAFI CTTAAG 1 cut(s) 2455
BstAPI GCANNNNNTGC 1 cut(s) 3204
BstC8I GCNNGC 3 cut(s) 55, 220, 1326
BstDSI CCRYGG 1 cut(s) 337
BstENI CCTNNNNNAGG 1 cut(s) 2810
BstF5I GGATG 7 cut(s) 854, 1070, 1524, 1865, 2246, 2361, 2859
BstHHI GCGC 1 cut(s) 1162
BstMAI GTCTC 3 cut(s) 266, 2118, 2905
BstMWI GCNNNNNNNGC 4 cut(s) 116, 125, 2390, 3204
BstNSI RCATGY 4 cut(s) 910, 2704, 2891, 3274
BstSCI CCNGG 1 cut(s) 1589
BstSFI CTRYAG 4 cut(s) 2368, 2394, 2662, 3282
BstSLI GKGCMC 1 cut(s) 220
BstV1I GCAGC 7 cut(s) 37, 44, 1521, 1980, 2380, 2408, 2648
BstV2I GAAGAC 4 cut(s) 709, 1453, 1621, 2145
BstX2I RGATCY 3 cut(s) 600, 2316, 3078
BstXI CCANNNNNNTGG 2 cut(s) 1537, 1952
BstYI RGATCY 3 cut(s) 600, 2316, 3078
BsuI GTATCC 2 cut(s) 389, 1658
BsuRI GGCC 6 cut(s) 1062, 1116, 1155, 1594, 2028, 2345
BtgI CCRYGG 1 cut(s) 337
BtrI CACGTC 1 cut(s) 3019
BtsCI GGATG 7 cut(s) 854, 1070, 1524, 1865, 2246, 2361, 2859
BtsIMutI CAGTG 4 cut(s) 145, 1210, 1537, 2094
BveI ACCTGC 1 cut(s) 2060
Cac8I GCNNGC 3 cut(s) 55, 220, 1326
CciI TCATGA 1 cut(s) 3184
CfoI GCGC 1 cut(s) 1162
Cfr13I GGNCC 4 cut(s) 845, 1592, 1883, 2189
CseI GACGC 1 cut(s) 2422
Csp6I GTAC 8 cut(s) 45, 342, 990, 1742, 1786, 2496, 2803, 2825
CviQI GTAC 8 cut(s) 45, 342, 990, 1742, 1786, 2496, 2803, 2825
DraI TTTAAA 4 cut(s) 625, 1500, 2226, 2590
EaeI YGGCCR 2 cut(s) 1060, 2343
Eam1104I CTCTTC 5 cut(s) 117, 1170, 2428, 3004, 3252
EarI CTCTTC 5 cut(s) 117, 1170, 2428, 3004, 3252
Ecl136II GAGCTC 1 cut(s) 2452
Eco130I CCWWGG 3 cut(s) 337, 1570, 2167
Eco147I AGGCCT 2 cut(s) 1155, 2028
Eco24I GRGCYC 1 cut(s) 2454
Eco31I GGTCTC 1 cut(s) 266
Eco32I GATATC 1 cut(s) 1846
Eco47I GGWCC 3 cut(s) 845, 1883, 2189
Eco53kI GAGCTC 1 cut(s) 2452
Eco57I CTGAAG 3 cut(s) 304, 1229, 1350
EcoICRI GAGCTC 1 cut(s) 2452
EcoNI CCTNNNNNAGG 1 cut(s) 2810
EcoRI GAATTC 3 cut(s) 774, 1807, 2740
EcoRV GATATC 1 cut(s) 1846
EcoT14I CCWWGG 3 cut(s) 337, 1570, 2167
EcoT38I GRGCYC 1 cut(s) 2454
ErhI CCWWGG 3 cut(s) 337, 1570, 2167
FalI AAGNNNNNCTT 2 cut(s) 3191, 3223
FaqI GGGAC 2 cut(s) 1848, 3029
FauNDI CATATG 1 cut(s) 1000
Fnu4HI GCNGC 7 cut(s) 51, 58, 1510, 1969, 2394, 2397, 2662
FokI GGATG 7 cut(s) 841, 1057, 1511, 1852, 2233, 2368, 2846
FriOI GRGCYC 1 cut(s) 2454
Fsp4HI GCNGC 7 cut(s) 51, 58, 1510, 1969, 2394, 2397, 2662
GlaI GCGC 1 cut(s) 1161
GluI GCNGC 7 cut(s) 51, 58, 1510, 1969, 2394, 2397, 2662
GsaI CCCAGC 1 cut(s) 1145
GsuI CTGGAG 2 cut(s) 2118, 2961
HaeIII GGCC 6 cut(s) 1062, 1116, 1155, 1594, 2028, 2345
HapII CCGG 6 cut(s) 281, 779, 1454, 1590, 2312, 3254
HgaI GACGC 1 cut(s) 2422
HhaI GCGC 1 cut(s) 1162
Hin1I GRCGYC 1 cut(s) 2414
Hin6I GCGC 1 cut(s) 1160
HinP1I GCGC 1 cut(s) 1160
HincII GTYRAC 3 cut(s) 174, 794, 1688
HindII GTYRAC 3 cut(s) 174, 794, 1688
HindIII AAGCTT 2 cut(s) 1448, 2059
HpaII CCGG 6 cut(s) 281, 779, 1454, 1590, 2312, 3254
HphI GGTGA 6 cut(s) 85, 127, 1190, 1327, 2624, 3243
Hpy166II GTNNAC 8 cut(s) 174, 218, 408, 794, 848, 1092, 1335, 1688
Hpy8I GTNNAC 8 cut(s) 174, 218, 408, 794, 848, 1092, 1335, 1688
Hpy99I CGWCG 2 cut(s) 2344, 2389
HpyAV CCTTC 9 cut(s) 589, 1432, 1688, 1755, 2018, 2573, 2816, 2987, 3054
HpyCH4III ACNGT 3 cut(s) 552, 742, 2090
HpyCH4IV ACGT 1 cut(s) 3018
HpyF10VI GCNNNNNNNGC 4 cut(s) 116, 125, 2390, 3204
HpySE526I ACGT 1 cut(s) 3018
Hsp92I GRCGYC 1 cut(s) 2414
HspAI GCGC 1 cut(s) 1160
Kpn2I TCCGGA 3 cut(s) 280, 778, 2311
KpnI GGTACC 1 cut(s) 345
LguI GCTCTTC 1 cut(s) 117
LmnI GCTCC 3 cut(s) 283, 2712, 2980
Lsp1109I GCAGC 7 cut(s) 37, 44, 1521, 1980, 2380, 2408, 2648
LweI GCATC 6 cut(s) 379, 1487, 1778, 2255, 2798, 3124
MaeII ACGT 1 cut(s) 3018
MaeIII GTNAC 9 cut(s) 10, 140, 205, 742, 970, 1265, 1520, 3001, 3112
MfeI CAATTG 1 cut(s) 2961
MflI RGATCY 3 cut(s) 600, 2316, 3078
MhlI GDGCHC 3 cut(s) 220, 1041, 2454
MlsI TGGCCA 1 cut(s) 1062
MluNI TGGCCA 1 cut(s) 1062
MlyI GAGTC 8 cut(s) 213, 423, 1787, 2109, 2229, 2907, 2932, 3317
MmeI TCCRAC 5 cut(s) 181, 2181, 2204, 2748, 3067
Mox20I TGGCCA 1 cut(s) 1062
MroI TCCGGA 3 cut(s) 280, 778, 2311
MroXI GAANNNNTTC 1 cut(s) 2437
MscI TGGCCA 1 cut(s) 1062
MslI CAYNNNNRTG 2 cut(s) 1203, 1929
Msp20I TGGCCA 1 cut(s) 1062
MspCI CTTAAG 1 cut(s) 2455
MspI CCGG 6 cut(s) 281, 779, 1454, 1590, 2312, 3254
MspR9I CCNGG 1 cut(s) 1591
MunI CAATTG 1 cut(s) 2961
Mva1269I GAATGC 2 cut(s) 2386, 2395
MwoI GCNNNNNNNGC 4 cut(s) 116, 125, 2390, 3204
NciI CCSGG 1 cut(s) 1591
NcoI CCATGG 1 cut(s) 337
NdeI CATATG 1 cut(s) 1000
NlaIV GGNNCC 4 cut(s) 271, 343, 649, 2714
NmuCI GTSAC 4 cut(s) 140, 205, 970, 3001
NspI RCATGY 4 cut(s) 910, 2704, 2891, 3274
OliI CACNNNNGTG 1 cut(s) 1203
PagI TCATGA 1 cut(s) 3184
PceI AGGCCT 2 cut(s) 1155, 2028
PciI ACATGT 2 cut(s) 906, 2887
PciSI GCTCTTC 1 cut(s) 117
PcsI WCGNNNNNNNCGW 1 cut(s) 226
PctI GAATGC 2 cut(s) 2386, 2395
PdmI GAANNNNTTC 1 cut(s) 2437
PflMI CCANNNNNTGG 4 cut(s) 864, 2186, 2352, 2984
PkrI GCNGC 7 cut(s) 52, 59, 1511, 1970, 2395, 2398, 2663
PleI GAGTC 8 cut(s) 212, 422, 1787, 2108, 2229, 2907, 2932, 3317
PpsI GAGTC 8 cut(s) 212, 422, 1787, 2108, 2229, 2907, 2932, 3317
PscI ACATGT 2 cut(s) 906, 2887
Psp124BI GAGCTC 1 cut(s) 2454
PspFI CCCAGC 1 cut(s) 1141
PspN4I GGNNCC 4 cut(s) 271, 343, 649, 2714
PspPI GGNCC 4 cut(s) 845, 1592, 1883, 2189
PsrI GAACNNNNNNTAC 2 cut(s) 236, 268
PstI CTGCAG 3 cut(s) 2372, 2398, 2666
PsuI RGATCY 3 cut(s) 600, 2316, 3078
RsaI GTAC 8 cut(s) 46, 343, 991, 1743, 1787, 2497, 2804, 2826
RsaNI GTAC 8 cut(s) 45, 342, 990, 1742, 1786, 2496, 2803, 2825
RseI CAYNNNNRTG 2 cut(s) 1203, 1929
SacI GAGCTC 1 cut(s) 2454
SapI GCTCTTC 1 cut(s) 117
SatI GCNGC 7 cut(s) 51, 58, 1510, 1969, 2394, 2397, 2662
Sau96I GGNCC 4 cut(s) 845, 1592, 1883, 2189
SchI GAGTC 8 cut(s) 213, 423, 1787, 2109, 2229, 2907, 2932, 3317
ScrFI CCNGG 1 cut(s) 1591
SduI GDGCHC 3 cut(s) 220, 1041, 2454
SfaNI GCATC 6 cut(s) 379, 1487, 1778, 2255, 2798, 3124
SfcI CTRYAG 4 cut(s) 2368, 2394, 2662, 3282
SinI GGWCC 3 cut(s) 845, 1883, 2189
SmiMI CAYNNNNRTG 2 cut(s) 1203, 1929
SmlI CTYRAG 8 cut(s) 351, 1426, 1513, 1546, 2135, 2455, 2717, 2917
SmoI CTYRAG 8 cut(s) 351, 1426, 1513, 1546, 2135, 2455, 2717, 2917
SseBI AGGCCT 2 cut(s) 1155, 2028
SspI AATATT 2 cut(s) 808, 1378
SstI GAGCTC 1 cut(s) 2454
StuI AGGCCT 2 cut(s) 1155, 2028
StyD4I CCNGG 1 cut(s) 1589
StyI CCWWGG 3 cut(s) 337, 1570, 2167
TaaI ACNGT 3 cut(s) 552, 742, 2090
TaiI ACGT 1 cut(s) 3021
TaqI TCGA 1 cut(s) 229
TaqII GACCGA 1 cut(s) 117
TatI WGTACW 1 cut(s) 1785
TscAI CASTG 4 cut(s) 145, 1210, 1537, 2101
TseFI GTSAC 4 cut(s) 140, 205, 970, 3001
TseI GCWGC 7 cut(s) 50, 57, 1509, 1968, 2393, 2396, 2661
Tsp45I GTSAC 4 cut(s) 140, 205, 970, 3001
TspDTI ATGAA 8 cut(s) 478, 768, 1059, 1692, 2430, 2618, 2798, 2835
TspGWI ACGGA 1 cut(s) 411
TspRI CASTG 4 cut(s) 145, 1210, 1537, 2101
Van91I CCANNNNNTGG 4 cut(s) 864, 2186, 2352, 2984
Vha464I CTTAAG 1 cut(s) 2455
VneI GTGCAC 1 cut(s) 216
VpaK11BI GGWCC 3 cut(s) 845, 1883, 2189
XagI CCTNNNNNAGG 1 cut(s) 2810
XbaI TCTAGA 3 cut(s) 2020, 2116, 2446
XceI RCATGY 4 cut(s) 910, 2704, 2891, 3274
XcmI CCANNNNNNNNNTGG 3 cut(s) 861, 1827, 2424
XmnI GAANNNNTTC 1 cut(s) 2437
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.