RchiOBHm_Chr2g0114221

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
26215577 .. 26219971
4395 bp
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UTR
Exon/CDS
Intron
PRQ48749

Sequence Viewer

Length: 2346 bp
ATGTCCACAATAACAGGATTAGATCTCAACCTCAATCAGCTTTCAGGTAGCCTCCCAACAGATATAGGCCTTGCGCTTCCAAAACTAGAAGAGTTTTATGCAGGAGGGAATCACCTCAGTGGAGTAATCCCCAAATCCATCTCCAATGCTTCTGAGCTTCGGAGAATAGAACTGGGACTTAACTCTTTTTCTGGATTTATTCCAACCACCCTGTGCCTCTTGACAAACCTTGAACGGCTCTCATTGTTTAGCAATAATTTGACCATTGATACCTCTACTCCAGAAGTTAATATTTTTTCTTGTCTGCCAAATCTTAGAAATTTGAGTGTTTTATCCGTCGGAAGCAATCCATTAAATGCCAAGCTTTCGATGTCCTTCAGTAATTTCTCTGCATCACTTCAAAATCTTTTTTTAGAAAATTGCAGCTTGAGAGGTAACATCCCTAGTGATATTGGGAATTTAAGTAGCTTGACAGTTTTAAACCTGGGAGGCAATCAATTGAGCGGGCCAATTCCAAGCTCAATGGGAAGACTACATAATCTTCAAGGTTTGGGTATGTATGATAACACATTGCAAGGATACATTCCAGATGAGCTTTGTCAACTAGAAAACTTATTTGGTTTGTACTTGGGTGGGAATCAACTCTCTGGTTCTGTACCTTCCTGCTTGGGTAATCTAACAGCATCTCTAAGACTTCTATACTTGGAGTCCAATTTGTTGAATTCCACAATACCATCAACCTTGTGGGGACTTACAGATATCTTGCAACTAGACTTGTCATCCAATTCTCTAATTGGACCTCTATCAGGTGGTGTTGGTAATTTGAAAGTTGCGATATACATAAATGTATCATACAACCAATTATCTGGGAGTATACCAAGTAGCATTGAGAGTTTAGTGAGTTTGGTCAATCTCTCCTTAGCACATAACAATCTAGAAGGCCCTATTCCTAGTTCCTTTGCTACCTGCTTAAGCTTAGAACTGTTGGATTTATCTCGAAATAGTTTCACTGGAGTGATTCCAAAGTCTCTAGAAGCACTCTCACATCTCAAGCATCTGAATTTGTCTTTCAACAGACTCCAAGGAGAAATTCCAAGCGGCGGTCCTTTCAAAAACTTCTCTACTGAATCATTTGTTTCAAACCATGGACTCTGTGGTGCATCCCAATTTGAAGTTCTACCATGCAAAAGAAAAGCTAGTATGTCTATCTTGAAATCTATTATTCCGGGGATCTTGTCAGCAATGCTTCTTGCGACCTCCATAATTTGGATGTTGATGTTACACAGAAAAAAGAATGCAACAGCTGCAGCACATATTATCTTGATGCCTCAAGTTTTATGCAGAAGGGTTTCATACCAAGAGCTCCTGTGTGCGACAGATGGATTCAATGAAAGCAACTTACTTGGTATTGGGGGTTTTGGCTCAGTATATAAAGGAACATTTCCAGATGAGGCAGATGTTGCAATAAAGGTTTTCAATTTGGATTTAGAAGGGGCATTTGCAAGTTTTGAGGTTGAATGTGAAATGCTAAGTAATGTTCGTCACAGAAATCTTGTCAAAGTCATCAGTTGTTGTAGTCAAATTGATTTCAAAGGTCTTGTATTGAATTACATGCCTAATGGGAGCCTTGAGAAGTGGTTGTATTCTCAGAATTCTTCTTTGGACTTAGTGCAGAGGTTGGATATAATGATAGATGTTGCATCGGCATTGGAGTACCTTCACCATGATTATGAAGTACCTATTGTCCATTGCGATTTGAAGCCGAGCAACATCTTACTAGATGATGATATGGTTGCACATGTTGCTGATTTTGGTATTGCAAAACTCTCGGGTGGAGGAGATTCTATGACTCAAACCATGACCCTGGCCACAATTGGGTATATTGCACCAGAGTATGGAACGGAAGGAATAGTGACCAGAAGAGGGGATGTGTATAGCTTCGGTATTGTAGTGATGGAAACATTTACAAGAAGGAAACCAACTGATGAGATCTTCATTGGGGAAATGAGATTAAGTCAATGGGTTGCAAATCACCTAGTTGCAAATGCGATAGTTGATGTTGTGGATGCTACTTTACTTGGAACCGAGGAGGATCATGAGTTCCTGAGCAAGAGGGAGTGCTTATCATCTATTATGAGATTAGCTGTTGCTTGTTCAGCAGAATCACCGGAAGAGAGGATAAACATGCAAGAGGCTGTAGCCATGCTTAAAATAATCAAGATCAAGTTTTCAAAGCAAACTGCAGCAGGAGGTGTGAAGACTGATTACAAATCGAATGAAGTGTGTTCTAGAAAGCCTCACATCTCAGAGATGCTTGATAATCGGCTTAAGTGTGTGAAGAAGTAG

Protein Analysis

781

Amino Acids

84.82

Weight (kDa)

5.53

Isoelectric Point (pI)

38.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 121 - 238 6.8e-08 Leucine-rich repeat region
LRR_8 PF13855 156 - 215 1.7e-06 Leucine rich repeat
LRR_8 PF13855 317 - 360 5e-08 Leucine rich repeat
Pkinase PF00069 463 - 734 1e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 466 - 735 1.5e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 974
AccB7I CCANNNNNTGG 2 cut(s) 1266, 1895
AccBSI CCGCTC 1 cut(s) 504
AccI GTMKAC 1 cut(s) 874
AciI CCGC 3 cut(s) 504, 1098, 1101
AclWI GGATC 2 cut(s) 1238, 2100
AcoI YGGCCR 1 cut(s) 1866
AcsI RAATTY 6 cut(s) 319, 457, 721, 1060, 1089, 1651
AcuI CTGAAG 1 cut(s) 361
AdeI CACNNNGTG 1 cut(s) 213
AfaI GTAC 4 cut(s) 626, 657, 1715, 1737
AfiI CCNNNNNNNGG 6 cut(s) 806, 1100, 1266, 1875, 1895, 1923
AflII CTTAAG 2 cut(s) 970, 2327
AflIII ACRYGT 1 cut(s) 1798
AjnI CCWGG 2 cut(s) 483, 1863
AjuI GAANNNNNNNTTGG 8 cut(s) 600, 632, 1074, 1106, 1158, 1190, 1643, 1675
AleI CACNNNNGTG 2 cut(s) 117, 1013
AloI GAACNNNNNNTCC 2 cut(s) 2084, 2116
Alw21I GWGCWC 1 cut(s) 1365
Alw26I GTCTC 1 cut(s) 1032
AlwI GGATC 2 cut(s) 1238, 2100
Ama87I CYCGRG 1 cut(s) 1828
AoxI GGCC 4 cut(s) 67, 506, 940, 1866
ApeKI GCWGC 4 cut(s) 423, 1304, 1307, 2243
ApoI RAATTY 6 cut(s) 319, 457, 721, 1060, 1089, 1651
Asp700I GAANNNNTTC 1 cut(s) 1348
AspLEI GCGC 1 cut(s) 76
AspS9I GGNCC 4 cut(s) 506, 797, 941, 1103
AsuC2I CCSGG 1 cut(s) 1227
AsuHPI GGTGA 4 cut(s) 104, 1712, 2024, 2157
AvaI CYCGRG 1 cut(s) 1828
AvaII GGWCC 2 cut(s) 797, 1103
BalI TGGCCA 1 cut(s) 1868
BanII GRGCYC 1 cut(s) 1365
BarI GAAGNNNNNNTAC 2 cut(s) 2249, 2281
BbsI GAAGAC 2 cut(s) 535, 2264
Bbv12I GWGCWC 1 cut(s) 1365
BbvI GCAGC 4 cut(s) 435, 1291, 1319, 2255
BccI CCATC 4 cut(s) 146, 742, 1373, 1948
BceAI ACGGC 1 cut(s) 251
BcgI CGANNNNNNTGC 2 cut(s) 1809, 1843
BciT130I CCWGG 2 cut(s) 485, 1865
BciVI GTATCC 1 cut(s) 572
BcnI CCSGG 1 cut(s) 1227
BcoDI GTCTC 1 cut(s) 1032
BfmI CTRYAG 3 cut(s) 1305, 2196, 2241
BfrI CTTAAG 2 cut(s) 970, 2327
BfuAI ACCTGC 1 cut(s) 974
BfuI GTATCC 1 cut(s) 572
BglII AGATCT 2 cut(s) 22, 1989
BisI GCNGC 5 cut(s) 424, 1099, 1305, 1308, 2244
BlsI GCNGC 5 cut(s) 425, 1100, 1306, 1309, 2245
Bme1390I CCNGG 3 cut(s) 485, 1227, 1865
Bme18I GGWCC 2 cut(s) 797, 1103
BmeT110I CYCGRG 1 cut(s) 1828
BmgT120I GGNCC 4 cut(s) 506, 797, 941, 1103
BmiI GGNNCC 2 cut(s) 1625, 2083
BmrFI CCNGG 3 cut(s) 485, 1227, 1865
BmrI ACTGGG 1 cut(s) 182
BmsI GCATC 8 cut(s) 401, 692, 1063, 1169, 1314, 1709, 2056, 2301
BmuI ACTGGG 1 cut(s) 182
BpiI GAAGAC 2 cut(s) 535, 2264
BpmI CTGGAG 2 cut(s) 264, 1032
Bpu10I CCTNAGC 2 cut(s) 919, 2105
BpuEI CTTGAG 4 cut(s) 448, 1034, 1314, 1649
BpuMI CCSGG 1 cut(s) 1227
BsaJI CCNNGG 6 cut(s) 484, 1081, 1144, 1226, 1863, 2085
BsaWI WCCGGW 1 cut(s) 2167
BsaXI ACNNNNNCTCC 2 cut(s) 262, 292
Bsc4I CCNNNNNNNGG 6 cut(s) 806, 1100, 1266, 1875, 1895, 1923
Bse1I ACTGG 2 cut(s) 177, 1015
Bse3DI GCAATG 3 cut(s) 569, 1248, 1747
BseBI CCWGG 2 cut(s) 485, 1865
BseDI CCNNGG 6 cut(s) 484, 1081, 1144, 1226, 1863, 2085
BseGI GGATG 6 cut(s) 438, 779, 1160, 1275, 1933, 2071
BseLI CCNNNNNNNGG 6 cut(s) 806, 1100, 1266, 1875, 1895, 1923
BseMI GCAATG 3 cut(s) 569, 1248, 1747
BseMII CTCAG 6 cut(s) 130, 144, 1437, 1661, 2096, 2319
BseNI ACTGG 2 cut(s) 177, 1015
BseRI GAGGAG 2 cut(s) 1851, 2102
BseXI GCAGC 4 cut(s) 435, 1291, 1319, 2255
BsgI GTGCAG 1 cut(s) 1691
BshFI GGCC 4 cut(s) 69, 508, 942, 1868
BsiHKAI GWGCWC 1 cut(s) 1365
BsiHKCI CYCGRG 1 cut(s) 1828
BsiSI CCGG 2 cut(s) 1226, 2168
BslFI GGGAC 2 cut(s) 189, 762
BslI CCNNNNNNNGG 6 cut(s) 806, 1100, 1266, 1875, 1895, 1923
BsmAI GTCTC 1 cut(s) 1032
BsmFI GGGAC 2 cut(s) 189, 762
BsmI GAATGC 1 cut(s) 1300
BsnI GGCC 4 cut(s) 69, 508, 942, 1868
BsoBI CYCGRG 1 cut(s) 1828
Bsp1286I GDGCHC 1 cut(s) 1365
Bsp143I GATC 5 cut(s) 22, 1230, 1989, 2092, 2220
Bsp19I CCATGG 1 cut(s) 1144
BspACI CCGC 3 cut(s) 504, 1098, 1101
BspANI GGCC 4 cut(s) 69, 508, 942, 1868
BspCNI CTCAG 6 cut(s) 129, 145, 1436, 1660, 2097, 2318
BspHI TCATGA 1 cut(s) 2095
BspLI GGNNCC 2 cut(s) 1625, 2083
BspMAI CTGCAG 2 cut(s) 1309, 2245
BspMI ACCTGC 1 cut(s) 974
BspPI GGATC 2 cut(s) 1238, 2100
BspTI CTTAAG 2 cut(s) 970, 2327
BsrBI CCGCTC 1 cut(s) 504
BsrDI GCAATG 3 cut(s) 569, 1248, 1747
BsrI ACTGG 2 cut(s) 177, 1015
BssECI CCNNGG 6 cut(s) 484, 1081, 1144, 1226, 1863, 2085
BssMI GATC 5 cut(s) 22, 1230, 1989, 2092, 2220
BssNAI GTATAC 1 cut(s) 875
BssT1I CCWWGG 2 cut(s) 1081, 1144
Bst1107I GTATAC 1 cut(s) 875
Bst2UI CCWGG 2 cut(s) 485, 1865
Bst4CI ACNGT 2 cut(s) 475, 984
Bst6I CTCTTC 3 cut(s) 84, 1915, 2166
BstAFI CTTAAG 2 cut(s) 970, 2327
BstAPI GCANNNNNTGC 3 cut(s) 1304, 1460, 1802
BstC8I GCNNGC 1 cut(s) 506
BstDSI CCRYGG 1 cut(s) 1144
BstENI CCTNNNNNAGG 1 cut(s) 804
BstF5I GGATG 6 cut(s) 438, 779, 1160, 1275, 1933, 2071
BstHHI GCGC 1 cut(s) 76
BstKTI GATC 5 cut(s) 25, 1233, 1992, 2095, 2223
BstMAI GTCTC 1 cut(s) 1032
BstMBI GATC 5 cut(s) 22, 1230, 1989, 2092, 2220
BstMWI GCNNNNNNNGC 4 cut(s) 1304, 1460, 1802, 2156
BstNI CCWGG 2 cut(s) 485, 1865
BstNSI RCATGY 3 cut(s) 1615, 1802, 2188
BstSCI CCNGG 3 cut(s) 483, 1225, 1863
BstSFI CTRYAG 3 cut(s) 1305, 2196, 2241
BstV1I GCAGC 4 cut(s) 435, 1291, 1319, 2255
BstV2I GAAGAC 2 cut(s) 535, 2264
BstX2I RGATCY 3 cut(s) 22, 1230, 1989
BstXI CCANNNNNNTGG 2 cut(s) 866, 1864
BstYI RGATCY 3 cut(s) 22, 1230, 1989
BstZ17I GTATAC 1 cut(s) 875
BsuI GTATCC 1 cut(s) 572
BsuRI GGCC 4 cut(s) 69, 508, 942, 1868
BtgI CCRYGG 1 cut(s) 1144
BtsCI GGATG 6 cut(s) 438, 779, 1160, 1275, 1933, 2071
BtsIMutI CAGTG 2 cut(s) 124, 1008
BveI ACCTGC 1 cut(s) 974
Cac8I GCNNGC 1 cut(s) 506
CciI TCATGA 1 cut(s) 2095
CfoI GCGC 1 cut(s) 76
Cfr13I GGNCC 4 cut(s) 506, 797, 941, 1103
Csp6I GTAC 4 cut(s) 625, 656, 1714, 1736
CviAII CATG 9 cut(s) 1145, 1182, 1612, 1724, 1799, 1858, 2096, 2185, 2203
CviQI GTAC 4 cut(s) 625, 656, 1714, 1736
DpnI GATC 5 cut(s) 24, 1232, 1991, 2094, 2222
DpnII GATC 5 cut(s) 22, 1230, 1989, 2092, 2220
DraI TTTAAA 1 cut(s) 480
DraIII CACNNNGTG 1 cut(s) 213
EaeI YGGCCR 1 cut(s) 1866
Eam1104I CTCTTC 3 cut(s) 84, 1915, 2166
EarI CTCTTC 3 cut(s) 84, 1915, 2166
Ecl136II GAGCTC 1 cut(s) 1363
Eco130I CCWWGG 2 cut(s) 1081, 1144
Eco147I AGGCCT 1 cut(s) 69
Eco24I GRGCYC 1 cut(s) 1365
Eco32I GATATC 1 cut(s) 760
Eco47I GGWCC 2 cut(s) 797, 1103
Eco53kI GAGCTC 1 cut(s) 1363
Eco57I CTGAAG 1 cut(s) 361
Eco88I CYCGRG 1 cut(s) 1828
EcoICRI GAGCTC 1 cut(s) 1363
EcoNI CCTNNNNNAGG 1 cut(s) 804
EcoO109I RGGNCCY 1 cut(s) 941
EcoRI GAATTC 2 cut(s) 721, 1651
EcoRII CCWGG 2 cut(s) 483, 1863
EcoRV GATATC 1 cut(s) 760
EcoT14I CCWWGG 2 cut(s) 1081, 1144
EcoT38I GRGCYC 1 cut(s) 1365
ErhI CCWWGG 2 cut(s) 1081, 1144
FaeI CATG 9 cut(s) 1148, 1185, 1615, 1727, 1802, 1861, 2099, 2188, 2206
FaqI GGGAC 2 cut(s) 189, 762
FatI CATG 9 cut(s) 1144, 1181, 1611, 1723, 1798, 1857, 2095, 2184, 2202
FauI CCCGC 1 cut(s) 497
FblI GTMKAC 1 cut(s) 874
Fnu4HI GCNGC 5 cut(s) 424, 1099, 1305, 1308, 2244
FokI GGATG 6 cut(s) 425, 766, 1147, 1282, 1940, 2078
FriOI GRGCYC 1 cut(s) 1365
Fsp4HI GCNGC 5 cut(s) 424, 1099, 1305, 1308, 2244
GlaI GCGC 1 cut(s) 75
GluI GCNGC 5 cut(s) 424, 1099, 1305, 1308, 2244
GsuI CTGGAG 2 cut(s) 264, 1032
HaeIII GGCC 4 cut(s) 69, 508, 942, 1868
HapII CCGG 2 cut(s) 1226, 2168
HhaI GCGC 1 cut(s) 76
Hin1II CATG 9 cut(s) 1148, 1185, 1615, 1727, 1802, 1861, 2099, 2188, 2206
Hin6I GCGC 1 cut(s) 74
HinP1I GCGC 1 cut(s) 74
HincII GTYRAC 1 cut(s) 602
HindII GTYRAC 1 cut(s) 602
HindIII AAGCTT 2 cut(s) 362, 973
HpaII CCGG 2 cut(s) 1226, 2168
HphI GGTGA 4 cut(s) 104, 1712, 2024, 2157
Hpy166II GTNNAC 3 cut(s) 6, 602, 875
Hpy188I TCNGA 6 cut(s) 154, 162, 341, 1059, 1650, 2308
Hpy8I GTNNAC 3 cut(s) 6, 602, 875
Hpy99I CGWCG 1 cut(s) 341
HpyAV CCTTC 8 cut(s) 385, 669, 932, 1338, 1484, 1727, 1898, 1965
HpyCH4III ACNGT 2 cut(s) 475, 984
HpyF10VI GCNNNNNNNGC 4 cut(s) 1304, 1460, 1802, 2156
Hsp92II CATG 9 cut(s) 1148, 1185, 1615, 1727, 1802, 1861, 2099, 2188, 2206
HspAI GCGC 1 cut(s) 74
Kzo9I GATC 5 cut(s) 22, 1230, 1989, 2092, 2220
LmnI GCTCC 2 cut(s) 1368, 1623
Lsp1109I GCAGC 4 cut(s) 435, 1291, 1319, 2255
LweI GCATC 8 cut(s) 401, 692, 1063, 1169, 1314, 1709, 2056, 2301
MaeIII GTNAC 4 cut(s) 434, 1278, 1541, 1912
MalI GATC 5 cut(s) 24, 1232, 1991, 2094, 2222
MbiI CCGCTC 1 cut(s) 504
MboI GATC 5 cut(s) 22, 1230, 1989, 2092, 2220
MboII GAAGA 8 cut(s) 101, 533, 540, 1647, 1932, 1984, 2183, 2269
MfeI CAATTG 2 cut(s) 497, 1872
MflI RGATCY 3 cut(s) 22, 1230, 1989
MhlI GDGCHC 1 cut(s) 1365
MlsI TGGCCA 1 cut(s) 1868
MluNI TGGCCA 1 cut(s) 1868
MlyI GAGTC 4 cut(s) 716, 1071, 1143, 1843
MmeI TCCRAC 4 cut(s) 227, 319, 966, 1659
Mox20I TGGCCA 1 cut(s) 1868
MroXI GAANNNNTTC 1 cut(s) 1348
MscI TGGCCA 1 cut(s) 1868
MseI TTAA 9 cut(s) 180, 288, 353, 461, 479, 971, 2012, 2208, 2328
MslI CAYNNNNRTG 3 cut(s) 117, 1013, 1728
Msp20I TGGCCA 1 cut(s) 1868
MspA1I CMGCKG 1 cut(s) 1304
MspCI CTTAAG 2 cut(s) 970, 2327
MspI CCGG 2 cut(s) 1226, 2168
MspR9I CCNGG 3 cut(s) 485, 1227, 1865
MunI CAATTG 2 cut(s) 497, 1872
Mva1269I GAATGC 1 cut(s) 1300
MvaI CCWGG 2 cut(s) 485, 1865
MwoI GCNNNNNNNGC 4 cut(s) 1304, 1460, 1802, 2156
NciI CCSGG 1 cut(s) 1227
NcoI CCATGG 1 cut(s) 1144
NdeII GATC 5 cut(s) 22, 1230, 1989, 2092, 2220
NlaIII CATG 9 cut(s) 1148, 1185, 1615, 1727, 1802, 1861, 2099, 2188, 2206
NlaIV GGNNCC 2 cut(s) 1625, 2083
NmeAIII GCCGAG 1 cut(s) 1788
NmuCI GTSAC 2 cut(s) 1541, 1912
NspI RCATGY 3 cut(s) 1615, 1802, 2188
OliI CACNNNNGTG 2 cut(s) 117, 1013
PagI TCATGA 1 cut(s) 2095
PceI AGGCCT 1 cut(s) 69
PciI ACATGT 1 cut(s) 1798
PctI GAATGC 1 cut(s) 1300
PdmI GAANNNNTTC 1 cut(s) 1348
PfeI GAWTC 7 cut(s) 109, 637, 1018, 1127, 1383, 1841, 2162
PflMI CCANNNNNTGG 2 cut(s) 1266, 1895
PkrI GCNGC 5 cut(s) 425, 1100, 1306, 1309, 2245
PleI GAGTC 4 cut(s) 715, 1071, 1143, 1843
PpsI GAGTC 4 cut(s) 715, 1071, 1143, 1843
PscI ACATGT 1 cut(s) 1798
Psp124BI GAGCTC 1 cut(s) 1365
Psp6I CCWGG 2 cut(s) 483, 1863
PspGI CCWGG 2 cut(s) 483, 1863
PspN4I GGNNCC 2 cut(s) 1625, 2083
PspPI GGNCC 4 cut(s) 506, 797, 941, 1103
PstI CTGCAG 2 cut(s) 1309, 2245
PsuI RGATCY 3 cut(s) 22, 1230, 1989
PvuII CAGCTG 1 cut(s) 1304
RsaI GTAC 4 cut(s) 626, 657, 1715, 1737
RsaNI GTAC 4 cut(s) 625, 656, 1714, 1736
RseI CAYNNNNRTG 3 cut(s) 117, 1013, 1728
SacI GAGCTC 1 cut(s) 1365
SaqAI TTAA 9 cut(s) 180, 288, 353, 461, 479, 971, 2012, 2208, 2328
SatI GCNGC 5 cut(s) 424, 1099, 1305, 1308, 2244
Sau3AI GATC 5 cut(s) 22, 1230, 1989, 2092, 2220
Sau96I GGNCC 4 cut(s) 506, 797, 941, 1103
SchI GAGTC 4 cut(s) 716, 1071, 1143, 1843
ScrFI CCNGG 3 cut(s) 485, 1227, 1865
SduI GDGCHC 1 cut(s) 1365
SfaNI GCATC 8 cut(s) 401, 692, 1063, 1169, 1314, 1709, 2056, 2301
SfcI CTRYAG 3 cut(s) 1305, 2196, 2241
SinI GGWCC 2 cut(s) 797, 1103
SmiMI CAYNNNNRTG 3 cut(s) 117, 1013, 1728
SmlI CTYRAG 6 cut(s) 427, 970, 1049, 1329, 1628, 2327
SmoI CTYRAG 6 cut(s) 427, 970, 1049, 1329, 1628, 2327
SseBI AGGCCT 1 cut(s) 69
SsiI CCGC 3 cut(s) 504, 1098, 1101
SspI AATATT 1 cut(s) 292
SstI GAGCTC 1 cut(s) 1365
StuI AGGCCT 1 cut(s) 69
StyD4I CCNGG 3 cut(s) 483, 1225, 1863
StyI CCWWGG 2 cut(s) 1081, 1144
TaaI ACNGT 2 cut(s) 475, 984
TaqI TCGA 3 cut(s) 368, 997, 2273
TatI WGTACW 1 cut(s) 624
TauI GCSGC 1 cut(s) 1101
TfiI GAWTC 7 cut(s) 109, 637, 1018, 1127, 1383, 1841, 2162
Tru1I TTAA 9 cut(s) 180, 288, 353, 461, 479, 971, 2012, 2208, 2328
Tru9I TTAA 9 cut(s) 180, 288, 353, 461, 479, 971, 2012, 2208, 2328
TscAI CASTG 2 cut(s) 124, 1015
TseFI GTSAC 2 cut(s) 1541, 1912
TseI GCWGC 4 cut(s) 423, 1304, 1307, 2243
Tsp45I GTSAC 2 cut(s) 1541, 1912
TspDTI ATGAA 5 cut(s) 1341, 1404, 1746, 1984, 2292
TspGWI ACGGA 2 cut(s) 325, 1916
TspRI CASTG 2 cut(s) 124, 1015
Van91I CCANNNNNTGG 2 cut(s) 1266, 1895
Vha464I CTTAAG 2 cut(s) 970, 2327
VpaK11BI GGWCC 2 cut(s) 797, 1103
XagI CCTNNNNNAGG 1 cut(s) 804
XapI RAATTY 6 cut(s) 319, 457, 721, 1060, 1089, 1651
XbaI TCTAGA 3 cut(s) 934, 1030, 2288
XceI RCATGY 3 cut(s) 1615, 1802, 2188
XcmI CCANNNNNNNNNTGG 2 cut(s) 741, 1151
XmiI GTMKAC 1 cut(s) 874
XmnI GAANNNNTTC 1 cut(s) 1348
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.