Rw0G017870

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00792
OG0000058
Physical Location & Seq
Forward (+)
131591 .. 168876
37286 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G017870.1

Sequence Viewer

Length: 3234 bp
ATGGAGAGCACTTGGTTCTTCCTTGTCCACTCTTGTTGTATGGCGGCTACCTGCTTAACAATGGCAGCACCACGGACCAATATCACCACATATCAATATGCTCTTCTTGCTCTCAAAGTCCGTATCACCAGTGATCCTTGTAACTTGATCTTCAACAACTGGTCAACCACCACTCCAACTTGCAATTGGGTTGGCGTTACTTGTGGTGCACGCCACCTTAGAGCCACAACCTTGAACCTCTCATACTTTGGTCTCGCCATTCCTCCGGAGTTAGGCAACCTATCATTTCTTGTGGATTTGGACCTCACAAATAACAGCTTTCACCGTTTCTTGCCCCAAGAATTGGCTTCCTTGAACCTCTCCTACTTTGGTCTCGAAGGCACTATTCCTCCACAGCTAGGCAACCTATCGTTTCTTGTCAATGTTGACTTGAGAAATAACAGTTTTCATGGCCATTTACCTAAGGAATTGACTCGTCTGCGCCGGTTGAAATTCATTAACTTTGGAAACAACTCATTTATGGGAGCCATTCCGTCGTGGTTCGGGTCTTTATCCAAACTTCAAAACTTCACTTTGAGTGGTAATCACTTTTCAGGTTCCATACCAACGGCCATTTTCAACTTATCTACACTGCGACGAATTGATTTCAGGCATAACCAGCTATCAGAAATTCCAAATGAGATCGGCGCTTTAGATCAACTAGAGAAGTTGTATGTGCAAGACAATGTCCTAGAAGGAAATGTTCCTATGGTTGTCTTCAACATGTCTTCTTTGATTACTTTGACTCTATTTGGAAACAACTTGAAGGGTAGACTTCCAAACAATATGTGCCAGAATCTTCCTCATATTCAAATTTTGAATTTCGGTGATAACCAGCTTGAAGGTCCACTTCCATCTATATATTGGCAATGCAAACAACTTGTTGATTTAAGATTGGAGCGTAACAAGTTCAGTGGAAGCATACCCAAAGATATTGGGAACGCAACCCAATTACAACATGTTTATCTTGCCGGAAACAATTTGACAGGTACTTGTACCATTCATCATGATTTATTAGTGGTGCGGGCCTTTTCCAAACTTCAAGAGTTGTATTTATATGGTAATAACTTTTCAGGTTCCATACCAGCGACCATCTTCAGCTTATCTGCACTACAAGTAATTTCTTTGAGATCTAACCTACTATCAGGTACTATACCAGATGAGATTGGTCGTCTTCCAAATTTAGTACTTTTGTACCTCGGTTTTAATAATCTGAATGGTCACATCCCAACCACAATCTTCAACAAGTCCACATTAGTGACCATTGGTCTAACTAGTAATAAGCTCTCAGGCAACCTCCCAACAAACACAGGTCTTGGGCTTCCAAACCTACAAAATTTCCTCCTAGGACAAAATAAACTCAGCGGAGTAATCCCCAAATCGATGTCCAATGCTTCTCAGCTCACGACCCTATCATTGGAAGAAAACTTTCTTTCAGGCTTTATTCCTAGCACGCTGTTAAATGTTCTCTCTTGCTTGGCAAATCTAAAAAATTTGAAGCACTTGGACTTCAGTAAAAACCCATTAAATGCCAACCTCCCTATTTCTATTAGGAATCTCTCTTCATCACTTCAGAATGTTTATCTATACAGCTGCAACATGAGAGGCAATATTCCTGACGATATAGGCAACTTGAGCGGCCTGATAGTCTTATCCATGTTTAACAACAAATTAAGTGGATCAATTCCAACCTCAATAGGAACTCTGAAAAATCTCCAAGGTTTGTCTTTGGGCGTTAACAACTTTCAAGGACACATCCCTGATGAACTTTGTCAACTAAAAAACCTTGTTGTGTTAGGGTTGTATGGTAACCAGCTCTCTGGCTCTATACCTTCTTGCTTGGGTCATCTAGCCACCGCACTAAGAACTCTAGCTTTAGGGTCCAATTTGTTGACTTCAAGAATACCAACTAACTTGTGGGGACTTTCAGATCTCTTGTATGTATACTTGTCATCCAATAATCTAAGTGGATCTCTCTCAGAAGATGTTGGCAATCTTAAAGTTATTATAGAGATGGATTTATCAAACAACCACTTATCCGGTAGCATACCGAGCAGCATTGGGAATCTACAGAGCTTGGTCATGCTCTCCTTGGAGAATAATAAGTTTGAAGGCCCTATTCCTAATTCACTTGGCAAGTCGCTCAGCTTGGAAATTTTAGATTTATCCATAAACAATTTGTCTGGATTGATTCCAAAGTCACTAGAATCGCTCAAATATCTCAAAATTTTAAATTTGTCTTTCAACAAACTCCAAGGAGAAATTCCAACGGGTGGACCATTCCAAAACCTCTCTGCTCAATCATTTGTTTCGAGCGGGGAACTCTGTGGTGCATCCCGATTCCTTGTCCCATCATGCAATAATAGTACATTTGAAGCACATTTGAAGTCCAGTATATCAGGGATCTTGTCAGCATTGTTCATAGCTACCTTCATTTGGATAGTGATACTATGCCGAAGAAAGAATGTGGAAGCTGCAAAAGAGATTACATTGTTCCCTCAACTTCTACAGAGAAGAGTTTCGCACCTCGAACTGGTTCGAGCAACAAATACATTTAATGTAAGCAACTTACTTGGCAGTGGTGGTTTTGGCTCAGTATATAAAGGAACATTTTCTGATGGGATAGATGTGGCTATAAAGGTTTTCAATTTACAGCTAGAAGGGGCGTTTAAGAGTTTCGATATTGAGTGTGAAATGCTAGGCAACATTCGTCATCGAAATCTTATCAAAATCATCAGTTACTGCAGTCAAACTGATTTCAAAGCCGTGGTACTGAACTACATGCCTAATGGGAGCCTTGAGAAGTGGTTGTATTCTCTGAACTTTTCTTTGAACATGCTGCAGAGGTTGAGTATTATGATAGATGTTGCATCGGCATTGGAATACCTTCATCATGGCTATGGTACACCTATTGTTCATTGTGATTTGAAGCCCAGCAATATCCTTCTGGATAAGGATATGAGTGCACATGTAGCTGACTTTGGCATTGCAAAACTCTTGTGTGGAAGAGATTCGATGACCCGAACCATCACTCAAGCCACAATTGGATATATGGCCCCAGCTTGTTCCATCGAATCACCAGATGGGAGGATAAATATTTATGAGGCTCTAGCCACTCTAAACAAAATCAAAAACAAGTTTTTCAAGGATGCTGCTCCGGAAGGAGTTGTGGTGTTGAACCATCCTCTTGTTTAG

Protein Analysis

1077

Amino Acids

118.07

Weight (kDa)

8.57

Isoelectric Point (pI)

33.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 34 - 68 2.3e-06 Leucine rich repeat N-terminal domain
LRR_14 PF23598 118 - 192 7.6e-06 Leucine-rich repeat region
LRR_14 PF23598 182 - 264 3.8e-07 Leucine-rich repeat region
LRR_8 PF13855 359 - 418 2.5e-08 Leucine rich repeat
LRR_14 PF23598 502 - 630 1.5e-09 Leucine-rich repeat region
LRR_14 PF23598 633 - 764 3.5e-10 Leucine-rich repeat region
Pkinase PF00069 866 - 1033 1.2e-30 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 867 - 1035 3e-29 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 59
AccB7I CCANNNNNTGG 2 cut(s) 343, 2312
AccBSI CCGCTC 2 cut(s) 1677, 2355
AccI GTMKAC 2 cut(s) 811, 1983
AccIII TCCGGA 2 cut(s) 265, 3196
AciI CCGC 6 cut(s) 44, 1063, 1404, 1677, 1896, 2355
AclWI GGATC 4 cut(s) 128, 1726, 2017, 2450
AcoI YGGCCR 2 cut(s) 451, 609
AcuI CTGAAG 3 cut(s) 1120, 1534, 1595
AfaI GTAC 8 cut(s) 1030, 1036, 1189, 1227, 1235, 2407, 2811, 2944
AfiI CCNNNNNNNGG 7 cut(s) 272, 343, 398, 1456, 2312, 2475, 2572
AflIII ACRYGT 3 cut(s) 762, 997, 3007
AhdI GACNNNNNGTC 1 cut(s) 1305
AhlI ACTAGT 1 cut(s) 1313
AjuI GAANNNNNNNTTGG 2 cut(s) 2286, 2318
AleI CACNNNNGTG 1 cut(s) 1295
Alw21I GWGCWC 3 cut(s) 11, 211, 3007
Alw26I GTCTC 2 cut(s) 257, 377
Alw44I GTGCAC 2 cut(s) 207, 3003
AlwI GGATC 4 cut(s) 128, 1726, 2017, 2450
AlwNI CAGNNNCTG 1 cut(s) 2781
Aor13HI TCCGGA 2 cut(s) 265, 3196
AoxI GGCC 6 cut(s) 451, 609, 1065, 1678, 2152, 3093
ApaLI GTGCAC 2 cut(s) 207, 3003
ApeKI GCWGC 6 cut(s) 65, 1632, 2094, 2513, 2878, 3191
Asp700I GAANNNNTTC 6 cut(s) 1467, 2557, 2574, 2650, 2925, 3049
AspA2I CCTAGG 1 cut(s) 1384
AspLEI GCGC 2 cut(s) 483, 689
AspS9I GGNCC 8 cut(s) 75, 301, 884, 1065, 1920, 2153, 2315, 3094
AsuHPI GGTGA 5 cut(s) 76, 118, 314, 878, 3108
AvaII GGWCC 5 cut(s) 75, 301, 884, 1920, 2315
AvrII CCTAGG 1 cut(s) 1384
AxyI CCTNAGG 1 cut(s) 462
BaeGI GKGCMC 2 cut(s) 211, 3007
BaeI ACNNNNGTAYC 2 cut(s) 1217, 1250
BalI TGGCCA 1 cut(s) 453
BbsI GAAGAC 3 cut(s) 748, 759, 1205
Bbv12I GWGCWC 3 cut(s) 11, 211, 3007
BbvI GCAGC 6 cut(s) 77, 1619, 2106, 2500, 2865, 3178
BccI CCATC 9 cut(s) 901, 1139, 2047, 2398, 2651, 3074, 3116, 3116, 3228
BceAI ACGGC 2 cut(s) 624, 2789
BcoDI GTCTC 2 cut(s) 257, 377
BcuI ACTAGT 1 cut(s) 1313
BfmI CTRYAG 4 cut(s) 2108, 2546, 2782, 2879
BfoI RGCGCY 1 cut(s) 690
BfuAI ACCTGC 1 cut(s) 59
BglII AGATCT 2 cut(s) 1169, 1969
BisI GCNGC 8 cut(s) 45, 66, 1633, 1678, 2095, 2514, 2879, 3192
BlnI CCTAGG 1 cut(s) 1384
BlpI GCTNAGC 1 cut(s) 2183
BlsI GCNGC 8 cut(s) 46, 67, 1634, 1679, 2096, 2515, 2880, 3193
BmcAI AGTACT 1 cut(s) 1227
Bme18I GGWCC 5 cut(s) 75, 301, 884, 1920, 2315
BmeRI GACNNNNNGTC 1 cut(s) 1305
BmgT120I GGNCC 8 cut(s) 75, 301, 884, 1065, 1920, 2153, 2315, 3094
BmiI GGNNCC 6 cut(s) 526, 598, 1117, 1921, 2834, 3096
BmsI GCATC 3 cut(s) 2381, 2918, 3178
BpiI GAAGAC 3 cut(s) 748, 759, 1205
Bpu1102I GCTNAGC 1 cut(s) 2183
BpuEI CTTGAG 4 cut(s) 451, 1693, 2858, 3057
Bsa29I ATCGAT 1 cut(s) 1421
BsaI GGTCTC 2 cut(s) 257, 377
BsaJI CCNNGG 7 cut(s) 71, 1237, 1384, 1756, 2130, 2293, 2805
BsaWI WCCGGW 3 cut(s) 265, 2078, 3196
BsaXI ACNNNNNCTCC 6 cut(s) 157, 187, 373, 403, 3195, 3225
Bsc4I CCNNNNNNNGG 7 cut(s) 272, 343, 398, 1456, 2312, 2475, 2572
Bse118I RCCGGY 1 cut(s) 483
Bse1I ACTGG 4 cut(s) 129, 164, 2430, 2577
Bse21I CCTNAGG 1 cut(s) 462
Bse3DI GCAATG 2 cut(s) 914, 3024
BseAI TCCGGA 2 cut(s) 265, 3196
BseCI ATCGAT 1 cut(s) 1421
BseDI CCNNGG 7 cut(s) 71, 1237, 1384, 1756, 2130, 2293, 2805
BseGI GGATG 6 cut(s) 1263, 1794, 1991, 2372, 3193, 3220
BseLI CCNNNNNNNGG 7 cut(s) 272, 343, 398, 1456, 2312, 2475, 2572
BseMI GCAATG 2 cut(s) 914, 3024
BseMII CTCAG 6 cut(s) 1341, 1414, 1451, 2031, 2197, 2646
BseNI ACTGG 4 cut(s) 129, 164, 2430, 2577
BseSI GKGCMC 2 cut(s) 211, 3007
BseXI GCAGC 6 cut(s) 77, 1619, 2106, 2500, 2865, 3178
BseYI CCCAGC 2 cut(s) 2972, 3097
BsgI GTGCAG 1 cut(s) 1131
BshFI GGCC 6 cut(s) 453, 611, 1067, 1680, 2154, 3095
BshVI ATCGAT 1 cut(s) 1421
BsiHKAI GWGCWC 3 cut(s) 11, 211, 3007
BsiSI CCGG 5 cut(s) 266, 484, 1011, 2079, 3197
BslFI GGGAC 2 cut(s) 1974, 2372
BslI CCNNNNNNNGG 7 cut(s) 272, 343, 398, 1456, 2312, 2475, 2572
BsmAI GTCTC 2 cut(s) 257, 377
BsmFI GGGAC 2 cut(s) 1974, 2372
BsnI GGCC 6 cut(s) 453, 611, 1067, 1680, 2154, 3095
Bso31I GGTCTC 2 cut(s) 257, 377
Bsp1286I GDGCHC 3 cut(s) 11, 211, 3007
Bsp13I TCCGGA 2 cut(s) 265, 3196
Bsp143I GATC 9 cut(s) 133, 147, 681, 694, 1169, 1718, 1969, 2009, 2442
Bsp1720I GCTNAGC 1 cut(s) 2183
BspACI CCGC 6 cut(s) 44, 1063, 1404, 1677, 1896, 2355
BspANI GGCC 6 cut(s) 453, 611, 1067, 1680, 2154, 3095
BspCNI CTCAG 6 cut(s) 1340, 1413, 1450, 2030, 2196, 2645
BspDI ATCGAT 1 cut(s) 1421
BspEI TCCGGA 2 cut(s) 265, 3196
BspHI TCATGA 1 cut(s) 1045
BspLI GGNNCC 6 cut(s) 526, 598, 1117, 1921, 2834, 3096
BspMAI CTGCAG 2 cut(s) 2786, 2883
BspMI ACCTGC 1 cut(s) 59
BspPI GGATC 4 cut(s) 128, 1726, 2017, 2450
BspQI GCTCTTC 1 cut(s) 108
BspTNI GGTCTC 2 cut(s) 257, 377
BsrBI CCGCTC 2 cut(s) 1677, 2355
BsrDI GCAATG 2 cut(s) 914, 3024
BsrFI RCCGGY 1 cut(s) 483
BsrI ACTGG 4 cut(s) 129, 164, 2430, 2577
BssAI RCCGGY 1 cut(s) 483
BssECI CCNNGG 7 cut(s) 71, 1237, 1384, 1756, 2130, 2293, 2805
BssMI GATC 9 cut(s) 133, 147, 681, 694, 1169, 1718, 1969, 2009, 2442
BssNAI GTATAC 1 cut(s) 1984
BssT1I CCWWGG 4 cut(s) 1384, 1756, 2130, 2293
Bst1107I GTATAC 1 cut(s) 1984
Bst4CI ACNGT 2 cut(s) 326, 443
Bst6I CTCTTC 4 cut(s) 108, 1606, 2548, 3040
BstC8I GCNNGC 3 cut(s) 211, 1065, 1493
BstDSI CCRYGG 2 cut(s) 71, 2805
BstEII GGTNACC 1 cut(s) 1847
BstF5I GGATG 6 cut(s) 1263, 1794, 1991, 2372, 3193, 3220
BstH2I RGCGCY 1 cut(s) 690
BstHHI GCGC 2 cut(s) 483, 689
BstKTI GATC 9 cut(s) 136, 150, 684, 697, 1172, 1721, 1972, 2012, 2445
BstMAI GTCTC 2 cut(s) 257, 377
BstMBI GATC 9 cut(s) 133, 147, 681, 694, 1169, 1718, 1969, 2009, 2442
BstMWI GCNNNNNNNGC 5 cut(s) 107, 658, 1674, 2091, 3011
BstNSI RCATGY 5 cut(s) 766, 1001, 2824, 2878, 3011
BstPI GGTNACC 1 cut(s) 1847
BstSFI CTRYAG 4 cut(s) 2108, 2546, 2782, 2879
BstSLI GKGCMC 2 cut(s) 211, 3007
BstV1I GCAGC 6 cut(s) 77, 1619, 2106, 2500, 2865, 3178
BstV2I GAAGAC 3 cut(s) 748, 759, 1205
BstX2I RGATCY 4 cut(s) 1169, 1969, 2009, 2442
BstXI CCANNNNNNTGG 1 cut(s) 1859
BstYI RGATCY 4 cut(s) 1169, 1969, 2009, 2442
BstZ17I GTATAC 1 cut(s) 1984
Bsu15I ATCGAT 1 cut(s) 1421
Bsu36I CCTNAGG 1 cut(s) 462
BsuRI GGCC 6 cut(s) 453, 611, 1067, 1680, 2154, 3095
BsuTUI ATCGAT 1 cut(s) 1421
BtgI CCRYGG 2 cut(s) 71, 2805
BtsCI GGATG 6 cut(s) 1263, 1794, 1991, 2372, 3193, 3220
BtsI GCAGTG 2 cut(s) 629, 2623
BtsIMutI CAGTG 4 cut(s) 136, 629, 958, 2623
BveI ACCTGC 1 cut(s) 59
Cac8I GCNNGC 3 cut(s) 211, 1065, 1493
CaiI CAGNNNCTG 1 cut(s) 2781
CciI TCATGA 1 cut(s) 1045
CfoI GCGC 2 cut(s) 483, 689
Cfr10I RCCGGY 1 cut(s) 483
Cfr13I GGNCC 8 cut(s) 75, 301, 884, 1065, 1920, 2153, 2315, 3094
ClaI ATCGAT 1 cut(s) 1421
Csp6I GTAC 8 cut(s) 1029, 1035, 1188, 1226, 1234, 2406, 2810, 2943
CspCI CAANNNNNGTGG 6 cut(s) 17, 52, 934, 969, 1696, 1731
CviQI GTAC 8 cut(s) 1029, 1035, 1188, 1226, 1234, 2406, 2810, 2943
DpnI GATC 9 cut(s) 135, 149, 683, 696, 1171, 1720, 1971, 2011, 2444
DpnII GATC 9 cut(s) 133, 147, 681, 694, 1169, 1718, 1969, 2009, 2442
DraI TTTAAA 1 cut(s) 2271
DriI GACNNNNNGTC 1 cut(s) 1305
EaeI YGGCCR 2 cut(s) 451, 609
Eam1104I CTCTTC 4 cut(s) 108, 1606, 2548, 3040
Eam1105I GACNNNNNGTC 1 cut(s) 1305
EarI CTCTTC 4 cut(s) 108, 1606, 2548, 3040
Eco130I CCWWGG 4 cut(s) 1384, 1756, 2130, 2293
Eco31I GGTCTC 2 cut(s) 257, 377
Eco47I GGWCC 5 cut(s) 75, 301, 884, 1920, 2315
Eco57I CTGAAG 3 cut(s) 1120, 1534, 1595
Eco81I CCTNAGG 1 cut(s) 462
Eco91I GGTNACC 1 cut(s) 1847
EcoO109I RGGNCCY 1 cut(s) 2153
EcoO65I GGTNACC 1 cut(s) 1847
EcoT14I CCWWGG 4 cut(s) 1384, 1756, 2130, 2293
ErhI CCWWGG 4 cut(s) 1384, 1756, 2130, 2293
FalI AAGNNNNNCTT 2 cut(s) 873, 905
FaqI GGGAC 2 cut(s) 1974, 2372
FauI CCCGC 2 cut(s) 1056, 2348
FblI GTMKAC 2 cut(s) 811, 1983
Fnu4HI GCNGC 8 cut(s) 45, 66, 1633, 1678, 2095, 2514, 2879, 3192
FokI GGATG 6 cut(s) 1250, 1781, 1978, 2359, 3200, 3207
Fsp4HI GCNGC 8 cut(s) 45, 66, 1633, 1678, 2095, 2514, 2879, 3192
GlaI GCGC 2 cut(s) 482, 688
GluI GCNGC 8 cut(s) 45, 66, 1633, 1678, 2095, 2514, 2879, 3192
GsaI CCCAGC 2 cut(s) 2976, 3101
HaeII RGCGCY 1 cut(s) 690
HaeIII GGCC 6 cut(s) 453, 611, 1067, 1680, 2154, 3095
HapII CCGG 5 cut(s) 266, 484, 1011, 2079, 3197
HhaI GCGC 2 cut(s) 483, 689
Hin6I GCGC 2 cut(s) 481, 687
HinP1I GCGC 2 cut(s) 481, 687
HincII GTYRAC 5 cut(s) 165, 427, 1777, 1814, 1932
HindII GTYRAC 5 cut(s) 165, 427, 1777, 1814, 1932
HpaI GTTAAC 1 cut(s) 1777
HpaII CCGG 5 cut(s) 266, 484, 1011, 2079, 3197
HphI GGTGA 5 cut(s) 76, 118, 314, 878, 3108
Hpy188I TCNGA 8 cut(s) 667, 1254, 1614, 1746, 1969, 2020, 2656, 2859
Hpy99I CGWCG 2 cut(s) 538, 639
HpyCH4III ACNGT 2 cut(s) 326, 443
HpyF10VI GCNNNNNNNGC 5 cut(s) 107, 658, 1674, 2091, 3011
HspAI GCGC 2 cut(s) 481, 687
Kpn2I TCCGGA 2 cut(s) 265, 3196
KspAI GTTAAC 1 cut(s) 1777
Kzo9I GATC 9 cut(s) 133, 147, 681, 694, 1169, 1718, 1969, 2009, 2442
LguI GCTCTTC 1 cut(s) 108
LmnI GCTCC 4 cut(s) 524, 937, 2832, 3199
Lsp1109I GCAGC 6 cut(s) 77, 1619, 2106, 2500, 2865, 3178
LweI GCATC 3 cut(s) 2381, 2918, 3178
MaeIII GTNAC 8 cut(s) 140, 196, 941, 1259, 1297, 1847, 2238, 2777
MalI GATC 9 cut(s) 135, 149, 683, 696, 1171, 1720, 1971, 2011, 2444
MbiI CCGCTC 2 cut(s) 1677, 2355
MboI GATC 9 cut(s) 133, 147, 681, 694, 1169, 1718, 1969, 2009, 2442
MfeI CAATTG 2 cut(s) 184, 3081
MflI RGATCY 4 cut(s) 1169, 1969, 2009, 2442
MhlI GDGCHC 3 cut(s) 11, 211, 3007
MlsI TGGCCA 1 cut(s) 453
MluNI TGGCCA 1 cut(s) 453
MlyI GAGTC 2 cut(s) 466, 778
MmeI TCCRAC 3 cut(s) 200, 1751, 2330
Mox20I TGGCCA 1 cut(s) 453
MroI TCCGGA 2 cut(s) 265, 3196
MroXI GAANNNNTTC 6 cut(s) 1467, 2557, 2574, 2650, 2925, 3049
MscI TGGCCA 1 cut(s) 453
MslI CAYNNNNRTG 2 cut(s) 1295, 2937
Msp20I TGGCCA 1 cut(s) 453
MspA1I CMGCKG 2 cut(s) 1404, 1632
MspI CCGG 5 cut(s) 266, 484, 1011, 2079, 3197
MunI CAATTG 2 cut(s) 184, 3081
MwoI GCNNNNNNNGC 5 cut(s) 107, 658, 1674, 2091, 3011
NdeII GATC 9 cut(s) 133, 147, 681, 694, 1169, 1718, 1969, 2009, 2442
NlaIV GGNNCC 6 cut(s) 526, 598, 1117, 1921, 2834, 3096
NmuCI GTSAC 3 cut(s) 1259, 1297, 2238
NspI RCATGY 5 cut(s) 766, 1001, 2824, 2878, 3011
OliI CACNNNNGTG 1 cut(s) 1295
PagI TCATGA 1 cut(s) 1045
PciI ACATGT 3 cut(s) 762, 997, 3007
PciSI GCTCTTC 1 cut(s) 108
PdmI GAANNNNTTC 6 cut(s) 1467, 2557, 2574, 2650, 2925, 3049
PfeI GAWTC 8 cut(s) 835, 1594, 2104, 2230, 2246, 2379, 3050, 3113
PflFI GACNNNGTC 1 cut(s) 725
PflMI CCANNNNNTGG 2 cut(s) 343, 2312
PkrI GCNGC 8 cut(s) 46, 67, 1634, 1679, 2096, 2515, 2880, 3193
PleI GAGTC 2 cut(s) 466, 778
PpsI GAGTC 2 cut(s) 466, 778
PscI ACATGT 3 cut(s) 762, 997, 3007
PspEI GGTNACC 1 cut(s) 1847
PspFI CCCAGC 2 cut(s) 2972, 3097
PspN4I GGNNCC 6 cut(s) 526, 598, 1117, 1921, 2834, 3096
PspPI GGNCC 8 cut(s) 75, 301, 884, 1065, 1920, 2153, 2315, 3094
PsrI GAACNNNNNNTAC 4 cut(s) 227, 259, 347, 379
PstI CTGCAG 2 cut(s) 2786, 2883
PstNI CAGNNNCTG 1 cut(s) 2781
PsuI RGATCY 4 cut(s) 1169, 1969, 2009, 2442
PsyI GACNNNGTC 1 cut(s) 725
PvuII CAGCTG 1 cut(s) 1632
RsaI GTAC 8 cut(s) 1030, 1036, 1189, 1227, 1235, 2407, 2811, 2944
RsaNI GTAC 8 cut(s) 1029, 1035, 1188, 1226, 1234, 2406, 2810, 2943
RseI CAYNNNNRTG 2 cut(s) 1295, 2937
SapI GCTCTTC 1 cut(s) 108
SatI GCNGC 8 cut(s) 45, 66, 1633, 1678, 2095, 2514, 2879, 3192
Sau3AI GATC 9 cut(s) 133, 147, 681, 694, 1169, 1718, 1969, 2009, 2442
Sau96I GGNCC 8 cut(s) 75, 301, 884, 1065, 1920, 2153, 2315, 3094
ScaI AGTACT 1 cut(s) 1227
SchI GAGTC 2 cut(s) 466, 778
SduI GDGCHC 3 cut(s) 11, 211, 3007
SfaNI GCATC 3 cut(s) 2381, 2918, 3178
SfcI CTRYAG 4 cut(s) 2108, 2546, 2782, 2879
SinI GGWCC 5 cut(s) 75, 301, 884, 1920, 2315
SmiMI CAYNNNNRTG 2 cut(s) 1295, 2937
SmlI CTYRAG 4 cut(s) 430, 1672, 2837, 3072
SmoI CTYRAG 4 cut(s) 430, 1672, 2837, 3072
SpeI ACTAGT 1 cut(s) 1313
SsiI CCGC 6 cut(s) 44, 1063, 1404, 1677, 1896, 2355
SspI AATATT 2 cut(s) 1651, 3136
StyI CCWWGG 4 cut(s) 1384, 1756, 2130, 2293
TaaI ACNGT 2 cut(s) 326, 443
TaqI TCGA 9 cut(s) 375, 1421, 2351, 2568, 2578, 2718, 2755, 3053, 3111
TatI WGTACW 2 cut(s) 1225, 2405
TauI GCSGC 2 cut(s) 47, 1680
TfiI GAWTC 8 cut(s) 835, 1594, 2104, 2230, 2246, 2379, 3050, 3113
TscAI CASTG 4 cut(s) 136, 636, 958, 2623
TseFI GTSAC 3 cut(s) 1259, 1297, 2238
TseI GCWGC 6 cut(s) 65, 1632, 2094, 2513, 2878, 3191
Tsp45I GTSAC 3 cut(s) 1259, 1297, 2238
TspDTI ATGAA 9 cut(s) 437, 484, 1031, 1593, 1818, 2449, 2461, 2918, 2945
TspGWI ACGGA 3 cut(s) 88, 110, 522
TspRI CASTG 4 cut(s) 136, 636, 958, 2623
Tth111I GACNNNGTC 1 cut(s) 725
Van91I CCANNNNNTGG 2 cut(s) 343, 2312
VneI GTGCAC 2 cut(s) 207, 3003
VpaK11BI GGWCC 5 cut(s) 75, 301, 884, 1920, 2315
XceI RCATGY 5 cut(s) 766, 1001, 2824, 2878, 3011
XcmI CCANNNNNNNNNTGG 3 cut(s) 183, 900, 1953
XmaJI CCTAGG 1 cut(s) 1384
XmiI GTMKAC 2 cut(s) 811, 1983
XmnI GAANNNNTTC 6 cut(s) 1467, 2557, 2574, 2650, 2925, 3049
ZrmI AGTACT 1 cut(s) 1227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.