RLG00000018087

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
25180085 .. 25186411
6327 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000018087

Sequence Viewer

Length: 3240 bp
ATGGAGGGAGTTACTTGGTTCTTCCTGGTATACTTGATTTGTTGTACGGTGGCCAGGTGCTTAACTATGGCGACACAAACCAATCTTAACATCACCACAGACCGGTCTGCTCTTCTTGCTCTCAAAGCCCGTATCACCAGCGACCCTCAAAACATGATCTTTACCAATTGGTCAACCACCACCCCTCTTTGCAATTGGGTTGGAGTCACTTGTGGTGCACGCCATTATCGAATCGCACAGTTGAACCTCTCTTACTTTGGTCTCACAGGCACCATTCCTCCGCAGCTAGGCAACTTATCTTTTCTTGTTGATTTGGACTTGAGAAATAATAGTTTTCACGGTACCTTGCCTCAGGAATTGGCTCGCCTGCGTCGGTTGATGTTTATTCACTTCGCATACAACAAGTTTACAGGAGTCATTCCGTCATGGTTTGGGTTCTTGTCCAAACTTCAAGGATTCAGGTTGTTTGGTAATCAATTTTCAGGTTCCATACCAGCTACCATCTTCAACTTATCTGCTCTGCAAATAATTGATCTCCGTTATAACCAACTCTCAGTCTTGTGGACAATATATTTCAACATCTTCGGAACATTCAAAAGTTGGATTTTTCTTACAACTAGCTTGACGGTCCGCTTCCATCCAAATGGTCGCAATGTAAACCACTCTTTTTTATTACATAGCACACCCATTAATATTCATCACTTAACCCAGATAAAAACGATTGATATTAGCTCGAACTATTTGACGGAAATTCCAAATGAGATCGGCACTTTGAATCATCTGGAAAAATTGTTTGTGCAATACAATGCCTTAAAAGGGCCTATCCCTATGACTATCTTCAGCATGTCATCTTTGACTATTGTAACTTTCTATGGTAACAATTTGAATGGTAGAATTCCTGACAATATTTGTCAAAATCTTTCAAATATTCAAGAGTTGAATTTGGGTGCCAATCAGTTTAAGGGTCCACTTCCTTCCATATTTGGGCAATGCAAACAACTTCTTACTTTAAAGTTGGGGGCTAACAACTTGACAGTATATGGAATAAGTATTGGTATAACTGTTGCAGGTCCTATACCTTACGAGATTGGTTGCCTTCCAAATTTAGAGTGGTTGGTGCTCAGTCAAAATAATCTAAATGGCCATATCCCATCCTCAATCTTCAATATCTCCACAATAACAGTATTAGATCTCGGCTTCAATCAGCTTTCAAGTAGCCTCCCAGCAGACATAGGCGTAGCGCTTCCAAACCTAGAAGCGTTATCAGTAGGAGCGAATCACCTCAGTGGAGTAATCCCCAAATCCATCTCCAATGCTTCTCAGCTTTGGTTTCTAGACCTGGGAGGTAACTCTTTTTCTGGATTTATTCCAAACACTCTGTGCCTCTTGACAAACCTTGAATGGCTCGTATTGGACAACAATAATTTGACCATTGATGCCTCTACTCCAGAAGTTAATATTTTTTCTTGTCTGCCAAATCTTAAAAATTTAGGGATTTTATCCTTCTTAAGCAATCCATTAAATGCGAAGCTTTCGATTTCCTTCAGCAATTTCTCTGCATCACTTCAATATCTTCATTTAGAAAATTGCAGCTTGAGAGGTAACATCCCCAGTGATATTGGGAATTTGAGTAGCTTGATAGAATTAGATCTGCAAGACAATCAATTGAGCGGGCCAATTCCAAGCTCAATGGGAAGACTGCATAATCTTCAAGGATTGTATATGACTGATAACACATTGCAAGGATACATTCCAGATAAGCTTTGTCAACTAGAAAACTTAGCTGAATTGGATTTCGGTGGGAATCAACTCTCTGGTTCTGTACCTTCCTGCTTGGGTAATCTAACAGCATCTCTAAGAAAACTGTACTTAAACTTCAATTTGTTGAATTCCACAATACCATCTACCTTGTGGGGACTTACAGATATCTTGCAACTAGACTTGTCATCCAATTCTCTAATTGGACCTCTATCAGGTGCTGTTGGTAATTTGAAAGTTGCTACATACATAAACGTATCATACAACCAATTATCTGGTAGTGTACCTAGTAGCATTGGGAGTTTACCGAATTTGGTCAATCTCTCCTTAGCACATAACAATCTAGAAGGCCCTATTCCTAGTTCCTTTGCAACTTGTGTAAGCTTAGAAGGATTGGATTTATCTCGAAATAGTTTCACTGGAGTGATTCCAAAGTCTCTAGAAGCACTCTCATATCTCAAGCATCTGAATTTGTCTTTCAACAGACTCCAAGGAGAAATTCCAAGCGGCGGTCCTTTCAAAAACTTCTCTGCTGAATCATTTGTTTCAAACCATGGACTTTGTGGTGGATCCCAATTTCAAGTTCCACCATGCATAAGAAAAACTACCATATCTGTCTTGAAGTATGTTATTCCGGGGATCTTGTCAGCAATGCTTCTAGCGACCTCCATACTTTGGATGCTGATGTTACGCAGAAAAAAAAATGTGAAAGCTGCAGCACATACTATCTTAACACCTCAAGTTTTCTGGAGAAGAGTTTCATACCTAGAGCTCCTACATGCGACAGATGGATTCAATGAAAGCAACTTACTTGGTACTGGGGGTTTTGGCTCAGTATATAAAGGAACATTGTCAGATGGGATAGACGTTGCGATAAAGGTTTTCAATTTGGAGTTAGAAGGGGCATTTACAAGTTTTGAGGTTGAATGTGAAGTGCTAAGTAATGTTCGTCACCGAAATCTTGTCAAAGTCATCAGTTGCTGCAGTCAAATTGATTTCAAAGGTCTTGTATTGAATTACATGCCTAATGGGAGCCTTGAGAAGTGGTTGTATTCTCAGAATTCTTCTTTGAACATAATGCAGTGTTTGGATATAATGATAGATGTTGCATCGGCATTACAGTACCTTCATCATGGTTATGAAGTACCTATTGTCCATTGTGATTTGAAGCCAAGCAACATCCTACTAGATGATGATATGGTTGCACATGTTGCTGATTTTGGTATTGCAAAACTCTTGGGTGGAGGAGATTCTATGACTCAAACCATGACCCAGGCCACAATAGGGTATATTGCTCCAGAGTATGGAACAGAAGGAATAGTGACCAGAAGAGGGGATGTGTATAGTTTCGTGATTCGTTGCTCAAAGCTCCAGTACTTGCCAGTTGCAAAACTTGTGAATATCCTTTGCAAGACCAATGGAGGCCAAAGAAGGCTAAAGCTGGAGAGGAGAAATAATACATTGATATGGGAAAGCTTCTGA

Protein Analysis

1080

Amino Acids

118.61

Weight (kDa)

7.51

Isoelectric Point (pI)

31.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 33 - 71 6.5e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 82 - 181 4e-08 Leucine-rich repeat region
LRR_14 PF23598 231 - 318 9.2e-07 Leucine-rich repeat region
LRR_8 PF13855 416 - 476 1.8e-07 Leucine rich repeat
LRR_14 PF23598 521 - 632 1.1e-10 Leucine-rich repeat region
LRR_8 PF13855 545 - 604 4.7e-06 Leucine rich repeat
LRR_8 PF13855 689 - 749 9.6e-10 Leucine rich repeat
Pkinase PF00069 852 - 1038 4.8e-34 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 855 - 1039 2.3e-35 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 543
Acc36I ACCTGC 1 cut(s) 1058
Acc65I GGTACC 1 cut(s) 341
AccB1I GGYRCC 3 cut(s) 269, 341, 947
AccB7I CCANNNNNTGG 2 cut(s) 2433, 3062
AccBSI CCGCTC 1 cut(s) 1671
AccI GTMKAC 1 cut(s) 30
AciI CCGC 5 cut(s) 281, 631, 1671, 2265, 2268
AclWI GGATC 3 cut(s) 2322, 2335, 2405
AcoI YGGCCR 2 cut(s) 51, 1141
AcuI CTGAAG 2 cut(s) 823, 1528
AdeI CACNNNGTG 1 cut(s) 1380
AfaI GTAC 9 cut(s) 46, 343, 1824, 1868, 2043, 2575, 2882, 2904, 3134
AfeI AGCGCT 1 cut(s) 1242
AflII CTTAAG 1 cut(s) 1507
AflIII ACRYGT 1 cut(s) 2965
AgeI ACCGGT 1 cut(s) 102
AjnI CCWGG 4 cut(s) 24, 53, 1338, 3030
AjuI GAANNNNNNNTTGG 4 cut(s) 2241, 2273, 2325, 2357
AleI CACNNNNGTG 2 cut(s) 1284, 2180
Alw21I GWGCWC 3 cut(s) 220, 1122, 2532
Alw26I GTCTC 2 cut(s) 266, 2199
Alw44I GTGCAC 1 cut(s) 216
AlwI GGATC 3 cut(s) 2322, 2335, 2405
AlwNI CAGNNNCTG 2 cut(s) 1979, 2739
Aor51HI AGCGCT 1 cut(s) 1242
AoxI GGCC 7 cut(s) 51, 818, 1141, 1673, 2107, 3033, 3181
ApaLI GTGCAC 1 cut(s) 216
ApeKI GCWGC 5 cut(s) 283, 1590, 2471, 2474, 2739
AseI ATTAAT 1 cut(s) 690
AsiGI ACCGGT 1 cut(s) 102
Asp700I GAANNNNTTC 1 cut(s) 2515
Asp718I GGTACC 1 cut(s) 341
AspLEI GCGC 1 cut(s) 1243
AspS9I GGNCC 8 cut(s) 628, 818, 965, 1070, 1673, 1964, 2108, 2270
AsuC2I CCSGG 1 cut(s) 2394
AsuHPI GGTGA 4 cut(s) 85, 127, 1271, 2702
AvaII GGWCC 5 cut(s) 628, 965, 1070, 1964, 2270
AxyI CCTNAGG 1 cut(s) 351
BaeGI GKGCMC 1 cut(s) 220
BalI TGGCCA 2 cut(s) 53, 1143
BamHI GGATCC 1 cut(s) 2327
BanI GGYRCC 3 cut(s) 269, 341, 947
BanII GRGCYC 1 cut(s) 2532
BarI GAAGNNNNNNTAC 2 cut(s) 1859, 1891
BbsI GAAGAC 1 cut(s) 1702
Bbv12I GWGCWC 3 cut(s) 220, 1122, 2532
BbvI GCAGC 5 cut(s) 295, 1602, 2458, 2486, 2726
BccI CCATC 7 cut(s) 509, 645, 1159, 1313, 1909, 2540, 2609
BciT130I CCWGG 4 cut(s) 26, 55, 1340, 3032
BciVI GTATCC 1 cut(s) 1739
BcnI CCSGG 1 cut(s) 2394
BcoDI GTCTC 2 cut(s) 266, 2199
BfmI CTRYAG 2 cut(s) 2472, 2740
BfoI RGCGCY 1 cut(s) 1244
BfrI CTTAAG 1 cut(s) 1507
BfuAI ACCTGC 1 cut(s) 1058
BfuI GTATCC 1 cut(s) 1739
BglII AGATCT 2 cut(s) 1189, 1648
BisI GCNGC 6 cut(s) 284, 1591, 2266, 2472, 2475, 2740
BlsI GCNGC 6 cut(s) 285, 1592, 2267, 2473, 2476, 2741
BmcAI AGTACT 1 cut(s) 3134
Bme1390I CCNGG 5 cut(s) 26, 55, 1340, 2394, 3032
Bme18I GGWCC 5 cut(s) 628, 965, 1070, 1964, 2270
BmgT120I GGNCC 8 cut(s) 628, 818, 965, 1070, 1673, 1964, 2108, 2270
BmiI GGNNCC 7 cut(s) 271, 343, 487, 949, 966, 2329, 2792
BmrFI CCNGG 5 cut(s) 26, 55, 1340, 2394, 3032
BmrI ACTGGG 2 cut(s) 1605, 2586
BmsI GCATC 6 cut(s) 1426, 1568, 1859, 2230, 2427, 2876
BmuI ACTGGG 2 cut(s) 1605, 2586
BpiI GAAGAC 1 cut(s) 1702
BpmI CTGGAG 6 cut(s) 1431, 2199, 2527, 3039, 3113, 3221
Bpu10I CCTNAGC 1 cut(s) 2086
BpuEI CTTGAG 5 cut(s) 340, 1615, 2201, 2481, 2816
BpuMI CCSGG 1 cut(s) 2394
BsaI GGTCTC 1 cut(s) 266
BsaJI CCNNGG 5 cut(s) 1339, 2248, 2311, 2393, 3030
BsaWI WCCGGW 1 cut(s) 102
BsaXI ACNNNNNCTCC 2 cut(s) 262, 292
Bse118I RCCGGY 1 cut(s) 102
Bse1I ACTGG 5 cut(s) 1611, 2182, 2581, 3130, 3140
Bse21I CCTNAGG 1 cut(s) 351
Bse3DI GCAATG 4 cut(s) 658, 995, 1736, 2415
BseBI CCWGG 4 cut(s) 26, 55, 1340, 3032
BseDI CCNNGG 5 cut(s) 1339, 2248, 2311, 2393, 3030
BseGI GGATG 7 cut(s) 637, 1151, 1605, 1946, 2442, 2937, 3100
BseMI GCAATG 4 cut(s) 658, 995, 1736, 2415
BseMII CTCAG 7 cut(s) 365, 567, 1135, 1297, 1334, 2604, 2828
BseNI ACTGG 5 cut(s) 1611, 2182, 2581, 3130, 3140
BseRI GAGGAG 2 cut(s) 3018, 3220
BseSI GKGCMC 1 cut(s) 220
BseXI GCAGC 5 cut(s) 295, 1602, 2458, 2486, 2726
BseYI CCCAGC 1 cut(s) 1222
BshFI GGCC 7 cut(s) 53, 820, 1143, 1675, 2109, 3035, 3183
BshNI GGYRCC 3 cut(s) 269, 341, 947
BshTI ACCGGT 1 cut(s) 102
BsiHKAI GWGCWC 3 cut(s) 220, 1122, 2532
BsiSI CCGG 2 cut(s) 103, 2393
BslFI GGGAC 1 cut(s) 1929
BsmAI GTCTC 2 cut(s) 266, 2199
BsmFI GGGAC 1 cut(s) 1929
BsnI GGCC 7 cut(s) 53, 820, 1143, 1675, 2109, 3035, 3183
Bso31I GGTCTC 1 cut(s) 266
Bsp1286I GDGCHC 3 cut(s) 220, 1122, 2532
Bsp143I GATC 7 cut(s) 156, 532, 762, 1189, 1648, 2327, 2397
Bsp19I CCATGG 1 cut(s) 2311
BspACI CCGC 5 cut(s) 281, 631, 1671, 2265, 2268
BspANI GGCC 7 cut(s) 53, 820, 1143, 1675, 2109, 3035, 3183
BspCNI CTCAG 7 cut(s) 364, 566, 1134, 1296, 1333, 2603, 2827
BspLI GGNNCC 7 cut(s) 271, 343, 487, 949, 966, 2329, 2792
BspMAI CTGCAG 2 cut(s) 2476, 2744
BspMI ACCTGC 1 cut(s) 1058
BspPI GGATC 3 cut(s) 2322, 2335, 2405
BspQI GCTCTTC 1 cut(s) 117
BspT107I GGYRCC 3 cut(s) 269, 341, 947
BspTI CTTAAG 1 cut(s) 1507
BspTNI GGTCTC 1 cut(s) 266
BsrBI CCGCTC 1 cut(s) 1671
BsrDI GCAATG 4 cut(s) 658, 995, 1736, 2415
BsrFI RCCGGY 1 cut(s) 102
BsrI ACTGG 5 cut(s) 1611, 2182, 2581, 3130, 3140
BssAI RCCGGY 1 cut(s) 102
BssECI CCNNGG 5 cut(s) 1339, 2248, 2311, 2393, 3030
BssMI GATC 7 cut(s) 156, 532, 762, 1189, 1648, 2327, 2397
BssNAI GTATAC 1 cut(s) 31
BssT1I CCWWGG 2 cut(s) 2248, 2311
Bst1107I GTATAC 1 cut(s) 31
Bst2UI CCWGG 4 cut(s) 26, 55, 1340, 3032
Bst4CI ACNGT 9 cut(s) 49, 240, 341, 628, 1036, 1063, 1183, 1866, 2880
Bst6I CTCTTC 3 cut(s) 117, 2506, 3082
BstAFI CTTAAG 1 cut(s) 1507
BstAPI GCANNNNNTGC 1 cut(s) 2969
BstC8I GCNNGC 4 cut(s) 220, 364, 368, 1673
BstDSI CCRYGG 1 cut(s) 2311
BstENI CCTNNNNNAGG 1 cut(s) 1971
BstF5I GGATG 7 cut(s) 637, 1151, 1605, 1946, 2442, 2937, 3100
BstH2I RGCGCY 1 cut(s) 1244
BstHHI GCGC 1 cut(s) 1243
BstKTI GATC 7 cut(s) 159, 535, 765, 1192, 1651, 2330, 2400
BstMAI GTCTC 2 cut(s) 266, 2199
BstMBI GATC 7 cut(s) 156, 532, 762, 1189, 1648, 2327, 2397
BstMWI GCNNNNNNNGC 3 cut(s) 116, 125, 2969
BstNI CCWGG 4 cut(s) 26, 55, 1340, 3032
BstNSI RCATGY 4 cut(s) 847, 2540, 2782, 2969
BstSCI CCNGG 5 cut(s) 24, 53, 1338, 2392, 3030
BstSFI CTRYAG 2 cut(s) 2472, 2740
BstSLI GKGCMC 1 cut(s) 220
BstV1I GCAGC 5 cut(s) 295, 1602, 2458, 2486, 2726
BstV2I GAAGAC 1 cut(s) 1702
BstX2I RGATCY 4 cut(s) 1189, 1648, 2327, 2397
BstXI CCANNNNNNTGG 2 cut(s) 644, 2033
BstYI RGATCY 4 cut(s) 1189, 1648, 2327, 2397
BstZ17I GTATAC 1 cut(s) 31
Bsu36I CCTNAGG 1 cut(s) 351
BsuI GTATCC 1 cut(s) 1739
BsuRI GGCC 7 cut(s) 53, 820, 1143, 1675, 2109, 3035, 3183
BtgI CCRYGG 1 cut(s) 2311
BtsCI GGATG 7 cut(s) 637, 1151, 1605, 1946, 2442, 2937, 3100
BtsI GCAGTG 1 cut(s) 2846
BtsIMutI CAGTG 4 cut(s) 1291, 1618, 2175, 2846
BveI ACCTGC 1 cut(s) 1058
Cac8I GCNNGC 4 cut(s) 220, 364, 368, 1673
CaiI CAGNNNCTG 2 cut(s) 1979, 2739
CfoI GCGC 1 cut(s) 1243
Cfr10I RCCGGY 1 cut(s) 102
Cfr13I GGNCC 8 cut(s) 628, 818, 965, 1070, 1673, 1964, 2108, 2270
CpoI CGGWCCG 1 cut(s) 628
CseI GACGC 1 cut(s) 359
Csp6I GTAC 9 cut(s) 45, 342, 1823, 1867, 2042, 2574, 2881, 2903, 3133
CspAI ACCGGT 1 cut(s) 102
CspI CGGWCCG 1 cut(s) 628
CviQI GTAC 9 cut(s) 45, 342, 1823, 1867, 2042, 2574, 2881, 2903, 3133
DpnI GATC 7 cut(s) 158, 534, 764, 1191, 1650, 2329, 2399
DpnII GATC 7 cut(s) 156, 532, 762, 1189, 1648, 2327, 2397
DraI TTTAAA 1 cut(s) 1011
DraIII CACNNNGTG 1 cut(s) 1380
EaeI YGGCCR 2 cut(s) 51, 1141
Eam1104I CTCTTC 3 cut(s) 117, 2506, 3082
EarI CTCTTC 3 cut(s) 117, 2506, 3082
Ecl136II GAGCTC 1 cut(s) 2530
Eco130I CCWWGG 2 cut(s) 2248, 2311
Eco24I GRGCYC 1 cut(s) 2532
Eco31I GGTCTC 1 cut(s) 266
Eco32I GATATC 1 cut(s) 1927
Eco47I GGWCC 5 cut(s) 628, 965, 1070, 1964, 2270
Eco47III AGCGCT 1 cut(s) 1242
Eco53kI GAGCTC 1 cut(s) 2530
Eco57I CTGAAG 2 cut(s) 823, 1528
Eco81I CCTNAGG 1 cut(s) 351
EcoICRI GAGCTC 1 cut(s) 2530
EcoNI CCTNNNNNAGG 1 cut(s) 1971
EcoO109I RGGNCCY 3 cut(s) 818, 1070, 2108
EcoRI GAATTC 3 cut(s) 894, 1888, 2818
EcoRII CCWGG 4 cut(s) 24, 53, 1338, 3030
EcoRV GATATC 1 cut(s) 1927
EcoT14I CCWWGG 2 cut(s) 2248, 2311
EcoT22I ATGCAT 1 cut(s) 2354
EcoT38I GRGCYC 1 cut(s) 2532
ErhI CCWWGG 2 cut(s) 2248, 2311
FaqI GGGAC 1 cut(s) 1929
FauI CCCGC 1 cut(s) 1664
FblI GTMKAC 1 cut(s) 30
Fnu4HI GCNGC 6 cut(s) 284, 1591, 2266, 2472, 2475, 2740
FokI GGATG 7 cut(s) 624, 1138, 1592, 1933, 2449, 2924, 3107
FriOI GRGCYC 1 cut(s) 2532
Fsp4HI GCNGC 6 cut(s) 284, 1591, 2266, 2472, 2475, 2740
GlaI GCGC 1 cut(s) 1242
GluI GCNGC 6 cut(s) 284, 1591, 2266, 2472, 2475, 2740
GsaI CCCAGC 1 cut(s) 1226
GsuI CTGGAG 6 cut(s) 1431, 2199, 2527, 3039, 3113, 3221
HaeII RGCGCY 1 cut(s) 1244
HaeIII GGCC 7 cut(s) 53, 820, 1143, 1675, 2109, 3035, 3183
HapII CCGG 2 cut(s) 103, 2393
HgaI GACGC 1 cut(s) 359
HhaI GCGC 1 cut(s) 1243
Hin6I GCGC 1 cut(s) 1241
HinP1I GCGC 1 cut(s) 1241
HincII GTYRAC 2 cut(s) 174, 1769
HindII GTYRAC 2 cut(s) 174, 1769
HindIII AAGCTT 4 cut(s) 1529, 1760, 2140, 3232
HpaII CCGG 2 cut(s) 103, 2393
HphI GGTGA 4 cut(s) 85, 127, 1271, 2702
Hpy188I TCNGA 5 cut(s) 587, 2226, 2614, 2817, 3239
Hpy99I CGWCG 1 cut(s) 375
HpyCH4III ACNGT 9 cut(s) 49, 240, 341, 628, 1036, 1063, 1183, 1866, 2880
HpyCH4IV ACGT 2 cut(s) 2013, 2625
HpyF10VI GCNNNNNNNGC 3 cut(s) 116, 125, 2969
HpySE526I ACGT 2 cut(s) 2013, 2625
HspAI GCGC 1 cut(s) 1241
KpnI GGTACC 1 cut(s) 345
Kzo9I GATC 7 cut(s) 156, 532, 762, 1189, 1648, 2327, 2397
LguI GCTCTTC 1 cut(s) 117
LmnI GCTCC 5 cut(s) 1271, 2535, 2790, 3058, 3132
Lsp1109I GCAGC 5 cut(s) 295, 1602, 2458, 2486, 2726
LweI GCATC 6 cut(s) 1426, 1568, 1859, 2230, 2427, 2876
MaeII ACGT 2 cut(s) 2013, 2625
MaeIII GTNAC 9 cut(s) 10, 205, 862, 875, 1346, 1601, 2445, 2708, 3079
MalI GATC 7 cut(s) 158, 534, 764, 1191, 1650, 2329, 2399
MbiI CCGCTC 1 cut(s) 1671
MboI GATC 7 cut(s) 156, 532, 762, 1189, 1648, 2327, 2397
MfeI CAATTG 3 cut(s) 166, 193, 1664
MflI RGATCY 4 cut(s) 1189, 1648, 2327, 2397
MhlI GDGCHC 3 cut(s) 220, 1122, 2532
MlsI TGGCCA 2 cut(s) 53, 1143
MluNI TGGCCA 2 cut(s) 53, 1143
MlyI GAGTC 4 cut(s) 213, 423, 2238, 3010
MmeI TCCRAC 2 cut(s) 181, 581
Mox20I TGGCCA 2 cut(s) 53, 1143
Mph1103I ATGCAT 1 cut(s) 2354
MroXI GAANNNNTTC 1 cut(s) 2515
MscI TGGCCA 2 cut(s) 53, 1143
MslI CAYNNNNRTG 5 cut(s) 642, 1284, 2180, 2895, 3223
Msp20I TGGCCA 2 cut(s) 53, 1143
MspCI CTTAAG 1 cut(s) 1507
MspI CCGG 2 cut(s) 103, 2393
MspR9I CCNGG 5 cut(s) 26, 55, 1340, 2394, 3032
MunI CAATTG 3 cut(s) 166, 193, 1664
MvaI CCWGG 4 cut(s) 26, 55, 1340, 3032
MwoI GCNNNNNNNGC 3 cut(s) 116, 125, 2969
NciI CCSGG 1 cut(s) 2394
NcoI CCATGG 1 cut(s) 2311
NdeII GATC 7 cut(s) 156, 532, 762, 1189, 1648, 2327, 2397
NlaIV GGNNCC 7 cut(s) 271, 343, 487, 949, 966, 2329, 2792
NmeAIII GCCGAG 1 cut(s) 1173
NmuCI GTSAC 3 cut(s) 205, 2708, 3079
NsiI ATGCAT 1 cut(s) 2354
NspI RCATGY 4 cut(s) 847, 2540, 2782, 2969
OliI CACNNNNGTG 2 cut(s) 1284, 2180
PciI ACATGT 1 cut(s) 2965
PciSI GCTCTTC 1 cut(s) 117
PcsI WCGNNNNNNNCGW 1 cut(s) 226
PdmI GAANNNNTTC 1 cut(s) 2515
PflMI CCANNNNNTGG 2 cut(s) 2433, 3062
PinAI ACCGGT 1 cut(s) 102
PkrI GCNGC 6 cut(s) 285, 1592, 2267, 2473, 2476, 2741
PleI GAGTC 4 cut(s) 212, 422, 2238, 3010
PpsI GAGTC 4 cut(s) 212, 422, 2238, 3010
PpuMI RGGWCCY 1 cut(s) 1070
PscI ACATGT 1 cut(s) 2965
PshBI ATTAAT 1 cut(s) 690
PsiI TTATAA 1 cut(s) 543
Psp124BI GAGCTC 1 cut(s) 2532
Psp5II RGGWCCY 1 cut(s) 1070
Psp6I CCWGG 4 cut(s) 24, 53, 1338, 3030
PspFI CCCAGC 1 cut(s) 1222
PspGI CCWGG 4 cut(s) 24, 53, 1338, 3030
PspN4I GGNNCC 7 cut(s) 271, 343, 487, 949, 966, 2329, 2792
PspPI GGNCC 8 cut(s) 628, 818, 965, 1070, 1673, 1964, 2108, 2270
PspPPI RGGWCCY 1 cut(s) 1070
PsrI GAACNNNNNNTAC 2 cut(s) 236, 268
PstI CTGCAG 2 cut(s) 2476, 2744
PstNI CAGNNNCTG 2 cut(s) 1979, 2739
PsuI RGATCY 4 cut(s) 1189, 1648, 2327, 2397
RsaI GTAC 9 cut(s) 46, 343, 1824, 1868, 2043, 2575, 2882, 2904, 3134
RsaNI GTAC 9 cut(s) 45, 342, 1823, 1867, 2042, 2574, 2881, 2903, 3133
RseI CAYNNNNRTG 5 cut(s) 642, 1284, 2180, 2895, 3223
Rsr2I CGGWCCG 1 cut(s) 628
RsrII CGGWCCG 1 cut(s) 628
SacI GAGCTC 1 cut(s) 2532
SapI GCTCTTC 1 cut(s) 117
SatI GCNGC 6 cut(s) 284, 1591, 2266, 2472, 2475, 2740
Sau3AI GATC 7 cut(s) 156, 532, 762, 1189, 1648, 2327, 2397
Sau96I GGNCC 8 cut(s) 628, 818, 965, 1070, 1673, 1964, 2108, 2270
ScaI AGTACT 1 cut(s) 3134
SchI GAGTC 4 cut(s) 213, 423, 2238, 3010
ScrFI CCNGG 5 cut(s) 26, 55, 1340, 2394, 3032
SduI GDGCHC 3 cut(s) 220, 1122, 2532
SfaNI GCATC 6 cut(s) 1426, 1568, 1859, 2230, 2427, 2876
SfcI CTRYAG 2 cut(s) 2472, 2740
SinI GGWCC 5 cut(s) 628, 965, 1070, 1964, 2270
SmiMI CAYNNNNRTG 5 cut(s) 642, 1284, 2180, 2895, 3223
SmlI CTYRAG 6 cut(s) 319, 1507, 1594, 2216, 2496, 2795
SmoI CTYRAG 6 cut(s) 319, 1507, 1594, 2216, 2496, 2795
SsiI CCGC 5 cut(s) 281, 631, 1671, 2265, 2268
SspI AATATT 4 cut(s) 694, 907, 928, 1459
SstI GAGCTC 1 cut(s) 2532
StyD4I CCNGG 5 cut(s) 24, 53, 1338, 2392, 3030
StyI CCWWGG 2 cut(s) 2248, 2311
TaaI ACNGT 9 cut(s) 49, 240, 341, 628, 1036, 1063, 1183, 1866, 2880
TaiI ACGT 2 cut(s) 2016, 2628
TaqI TCGA 4 cut(s) 229, 734, 1535, 2164
TatI WGTACW 2 cut(s) 1866, 3132
TauI GCSGC 1 cut(s) 2268
TscAI CASTG 4 cut(s) 1291, 1618, 2182, 2846
TseFI GTSAC 3 cut(s) 205, 2708, 3079
TseI GCWGC 5 cut(s) 283, 1590, 2471, 2474, 2739
Tsp45I GTSAC 3 cut(s) 205, 2708, 3079
TspDTI ATGAA 6 cut(s) 686, 1565, 2508, 2571, 2876, 2913
TspGWI ACGGA 3 cut(s) 411, 527, 761
TspRI CASTG 4 cut(s) 1291, 1618, 2182, 2846
Van91I CCANNNNNTGG 2 cut(s) 2433, 3062
Vha464I CTTAAG 1 cut(s) 1507
VneI GTGCAC 1 cut(s) 216
VpaK11BI GGWCC 5 cut(s) 628, 965, 1070, 1964, 2270
VspI ATTAAT 1 cut(s) 690
XagI CCTNNNNNAGG 1 cut(s) 1971
XbaI TCTAGA 3 cut(s) 1333, 2101, 2197
XceI RCATGY 4 cut(s) 847, 2540, 2782, 2969
XcmI CCANNNNNNNNNTGG 3 cut(s) 1107, 1908, 2318
XmiI GTMKAC 1 cut(s) 30
XmnI GAANNNNTTC 1 cut(s) 2515
ZrmI AGTACT 1 cut(s) 3134
Zsp2I ATGCAT 1 cut(s) 2354
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.