MD07G1235700.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
30870692 .. 30875108
4417 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1235700.v1.1.491

Sequence Viewer

Length: 3285 bp
ATGATACACTGCTTGTGTTATATCTATATGATGATTATGGCTAATTGCTTAACTGCAGGTGTATTAGCAATATCTCATACCAATATCAGCACAGATCAGTCTGCGCTTCTTTCTCTCAAAGCTCACATCACTAGTGACCCTCAAAACATCTTGACCGCCAACTGGTCCTCTGCCTCCAATTCCAACATTTGCAACTGGGTTGGCGTTAGCTGCGGCAACCTCTCATTTCTCGTTGAGTTGGGCCTTAAGAATAATAGCTTTCATGGTCCCCTACCGCAAGAACTGTCTCGTTTGCGCCGGTTGAAGGCGATTGACTTTGGAAACAACAGCTTTATGGGAACCATTCCTTGGTGGTTTGGGTCTTTTGCTAAACTTCAAACCATTAGATTGTACGGTAATGGCTTCTCGGGTTTCATACCGGCTGCTATCTTCAACTTATCTGCACTCGAAATAATTGATCTAATGAGGAACCAACTATCGGGTAGCATACCCAGAGAAATAGGCAACTTAACAATGGTGAAGGGCATATACCTTGACGACAACAAGTTCGAAGAACTTCCGAACGAGATGGGCAGTTTAGTTCAGCTGGAGGAGTTGTATGTGCAGTTCAATGCCCTAAAAGCCTCTGCTCTTATGCCTGTCTTCAACATATCTTCTTTGACTATTTTGAATCTATACGGAAACAACATGAGTGGCAGTTTTCCGGACAATATATGTGAGCATCTTTCGAGTATTCGAGTATTTGATTTGAGTCGAAGCCAGCTTGGCGGTCTGATTCCCGCCAAACTGTGGCAATGCAAAGAGCTTCGTGAAATCTCTTTACACTCTAACAATTTCCGTGGAAGCATACCGAAAAGTCTTGGCAATTTGACCTACTTAACCGGGATTGATCTTTCTGAGAATCATTTAACAGGTACAATACCGGATGAGATTGGTGATCTTCCGCAGTTAGAGTTTTTGGGACTGGCTATTAATAATCTCAGCGGCGTCATCCTATCCAAACTCTTCAATCTCTCCATGATAAGAACAATAGGGCTTTCTTTCAATCAGCTCTCAGGTAGCCTCCCCGCAAACATCGGTCTTAACGCTCCAAACTTAGAAATCCTTTTTGTATCCAGTACTAACCTCGTGGCTGGACTACTCCCTAACCTCTCCAGTGCTTCCAAGCTCAGGGTGCTAGACATGAGCAAAAACGCATTTACCGGGTTTCTTCCTAGCACGCTCTGTTCCTTGAAAAACCTTGAGATTATTTCCTTGTTCTTGAATAATTTGACAATTGATGCTTCTACTCCACAAGCAGCAAGCACTCTCTCTTGCTTGTTTAATCTTAGAAATTTGACAAAGTTAGACATGGGAGACAATTCACTAAACACCACGATTCCAGCTTCTCGCGGGAATCTCTCTACGTCACTCCTATATGTGGGTTTATTCCGTTGCAACATCAGGGGCAACATTCCAGTAGAAATTGGCAACTTGAGCAGCTTGATAGCACTACAATTGGGAAGCAATCAGTTGAGTGGAGCAATTCCAACTTCAATACAAAGGCTACAAAATCTCCAACTTTTGTATTTGTATGATAACGAACTGCAAGGACATATCCCGTATGAACTCTGTCAACTAAACAACCTAGCCGGTTTACTTTTGCATGGTAATCGGCTCTCTGGTTCTATTCCTTCCTGCTTGGGTACTTTGGCAGTAGCTCTAAGATATCTACGGTTAGGGTCCAATTTGTTAACTTCAAAAATACCATCTTCCTTGTGGGAACTCAAGTATATATTGGAGCTAAACTTGTCATCCAATTCTCTAGTTGGACCACTCTCGGAAGACATCGGAAAGTTGAAAGATGTGGTGGTAATGGATTTATCAAATAACCATTTCTCCGGAAACATTCCCGGTAGCATTGGGGGTCTTCAGAAAATGATTGATTTTTCCTTGGCAAACAATTATTTAGAAGGCCCTATTCCCGGTTCATTTAAAACCTTGCTAAGCCTAGAATTCTTGGATTTATCCAAAAACAATCTATCTGGAGTGATCCCAAAGTCATTGGAAGCCCTCTTGTATCTCAAGCATCTGAATTTGTCTTTCAACAAACTCCAAGGAGAAATTCCAACAGGCGGGCCTTTCGGAAACTTCTCTGATGATTCATTTGTATCAAACGGTGCACTCTGCGGTACTTCCCGACTCCATTTTCCATTATGCAAATACAGAACAAAAGTTGAGCCAAATTGGAGGAAAGCTAAATATATCATCTCAGGGGTCATGTCAATAATACTCCTAGCCGCTGCTGCATTGATTCTGATGCTATGCAGGAAAAGGAATGTTGAAGTTGTAAGAGAAACTGCCTTGCTACGTCGAGTTCTTTGGAGAAGAGTTTCGCGCCTAGAACTTGTAAGGGCGACAAATGGACTTCACGAGAGTAACTTACTAGGCACAGGGGGGTTTGGCTCAGTATACAGAGGAACACTGTCAGACGGGATAGATATCGCCCTCAAGGTTTTCAATTTACAGCTAGAAGGGGCATTCAAGAGTTTTGCGAAGGAATGTGAAATGCTAAGCAATATCCGTCATCGGAATCTTATTAAAATCATAAGTTGTTGCGATGAACTTGATTTCAAAGCCCTGGTGCTTCAATTGATGCCTAATGGAAGCCTCGAACAGTGGTTGTATTCTCCAAACCGCTCCATGACTATCCTGCAGAGGTTGGACATAATGAAAGATGTTGCATTGGCACTAGAATATCTTCATCAAGGTTACTCGATACCTATCGTTCATTGTGACGTGAAACCAAGCAATATACTATTAGATGATGATATGGCTGCACATGTTGCTGATTTTGGCATTTCAAGACTCATCGGCAGTGGAGATTCGATGACGGAAACAATGACCCTAGCCACAGTTGGATACATGGCTCCAGAGTTTGGGATAGAAGGAAGCGTTTCGACGAGTGGGGATGTGTATAGTTTTGGTATTGTACTCATGGAGACATTCACAAAAAGGAAGCCAACGGATGAGATGTTTGTTGGGGAAATGAATTTAAAGCAATGGATTGCAGATTCATTATTTCTAAATGCTGCTATAGATGAAGTTGTGGATGCCGATATACTTGGGACGGAGGAAGATGGTGGTTTCGTGAGCAGGAGGGATTGCTTATCATCCGTTATGAGATTAGCTTTAGCTTGCACTGCAGCATTGCCGAAAGAAAGGATTAACATGAAAGATGCCGTAGTCGCACTGAATAAAATCAAGGCCAAGTATTTGAAGGACTCTGGAGGAGTGAATTCTTAG

Protein Analysis

1095

Amino Acids

119.7

Weight (kDa)

6.52

Isoelectric Point (pI)

37.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 30 - 71 6.1e-09 Leucine rich repeat N-terminal domain
LRR_8 PF13855 269 - 327 6.1e-07 Leucine rich repeat
LRR_14 PF23598 585 - 698 3.1e-06 Leucine-rich repeat region
LRR_8 PF13855 644 - 698 1.1e-06 Leucine rich repeat
Pkinase PF00069 804 - 1073 3.8e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 806 - 1075 2.8e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 47
Acc36I ACCTGC 1 cut(s) 47
AccB7I CCANNNNNTGG 3 cut(s) 348, 789, 2918
AccBSI CCGCTC 1 cut(s) 2679
AccI GTMKAC 1 cut(s) 2451
AccII CGCG 2 cut(s) 1392, 2377
AccIII TCCGGA 2 cut(s) 703, 1880
AclWI GGATC 1 cut(s) 2026
AcsI RAATTY 6 cut(s) 1333, 1994, 2074, 2103, 3031, 3277
AcuI CTGAAG 1 cut(s) 1895
AcyI GRCGYC 1 cut(s) 987
AfaI GTAC 6 cut(s) 392, 916, 1120, 1687, 2173, 2973
AflII CTTAAG 1 cut(s) 245
AflIII ACRYGT 1 cut(s) 2821
AhlI ACTAGT 1 cut(s) 131
AjiI CACGTC 1 cut(s) 2779
AjnI CCWGG 1 cut(s) 2619
AjuI GAANNNNNNNTTGG 4 cut(s) 331, 363, 2088, 2120
Alw21I GWGCWC 1 cut(s) 2164
Alw26I GTCTC 3 cut(s) 291, 1350, 2975
Alw44I GTGCAC 1 cut(s) 2160
AlwI GGATC 1 cut(s) 2026
Ama87I CYCGRG 1 cut(s) 406
Aor13HI TCCGGA 2 cut(s) 703, 1880
AoxI GGCC 4 cut(s) 241, 1954, 2117, 3246
ApaLI GTGCAC 1 cut(s) 2160
ApeKI GCWGC 9 cut(s) 210, 422, 1298, 1479, 2282, 2285, 2816, 3071, 3185
ApoI RAATTY 6 cut(s) 1333, 1994, 2074, 2103, 3031, 3277
ArsI GACNNNNNNTTYG 2 cut(s) 530, 562
AseI ATTAAT 1 cut(s) 972
Asp700I GAANNNNTTC 4 cut(s) 555, 2371, 2739, 2935
AspLEI GCGC 3 cut(s) 106, 297, 2379
AspS9I GGNCC 7 cut(s) 165, 241, 266, 1722, 1811, 1955, 2117
AsuC2I CCSGG 4 cut(s) 883, 1204, 1893, 1965
AsuHPI GGTGA 2 cut(s) 529, 947
AsuII TTCGAA 1 cut(s) 549
AvaI CYCGRG 1 cut(s) 406
AvaII GGWCC 4 cut(s) 165, 266, 1722, 1811
BaeGI GKGCMC 1 cut(s) 2164
BarI GAAGNNNNNNTAC 2 cut(s) 512, 544
BauI CACGAG 2 cut(s) 1127, 2411
BbsI GAAGAC 3 cut(s) 634, 1830, 1901
Bbv12I GWGCWC 1 cut(s) 2164
BbvI GCAGC 9 cut(s) 197, 409, 1310, 1491, 2269, 2272, 2803, 3058, 3197
BccI CCATC 3 cut(s) 562, 1756, 3113
BceAI ACGGC 1 cut(s) 3206
BcgI CGANNNNNNTGC 2 cut(s) 1634, 1668
BciT130I CCWGG 1 cut(s) 2621
BciVI GTATCC 2 cut(s) 1123, 2894
BcnI CCSGG 4 cut(s) 883, 1204, 1893, 1965
BcoDI GTCTC 3 cut(s) 291, 1350, 2975
BcuI ACTAGT 1 cut(s) 131
BfmI CTRYAG 4 cut(s) 54, 2693, 3075, 3183
BfrI CTTAAG 1 cut(s) 245
BfuAI ACCTGC 1 cut(s) 47
BfuI GTATCC 2 cut(s) 1123, 2894
BglI GCCNNNNNGGC 1 cut(s) 765
BlpI GCTNAGC 2 cut(s) 1985, 2552
BmcAI AGTACT 1 cut(s) 1120
Bme1390I CCNGG 5 cut(s) 883, 1204, 1893, 1965, 2621
Bme18I GGWCC 4 cut(s) 165, 266, 1722, 1811
BmeT110I CYCGRG 1 cut(s) 406
BmgBI CACGTC 1 cut(s) 2779
BmgT120I GGNCC 7 cut(s) 165, 241, 266, 1722, 1811, 1955, 2117
BmiI GGNNCC 5 cut(s) 268, 340, 470, 1723, 2910
BmrFI CCNGG 5 cut(s) 883, 1204, 1893, 1965, 2621
BmrI ACTGGG 1 cut(s) 205
BmsI GCATC 7 cut(s) 730, 1270, 2077, 2289, 2625, 3082, 3208
BmuI ACTGGG 1 cut(s) 205
BpiI GAAGAC 3 cut(s) 634, 1830, 1901
BpmI CTGGAG 4 cut(s) 608, 1138, 2046, 2895
Bpu10I CCTNAGC 1 cut(s) 1169
Bpu1102I GCTNAGC 2 cut(s) 1985, 2552
Bpu14I TTCGAA 1 cut(s) 549
BpuEI CTTGAG 5 cut(s) 1262, 1495, 1751, 2048, 2474
BpuMI CCSGG 4 cut(s) 883, 1204, 1893, 1965
BsaBI GATNNNNATC 2 cut(s) 2480, 2762
BsaHI GRCGYC 1 cut(s) 987
BsaJI CCNNGG 5 cut(s) 347, 838, 1932, 2095, 2619
BsaWI WCCGGW 3 cut(s) 703, 922, 1880
BsaXI ACNNNNNCTCC 6 cut(s) 581, 611, 1539, 1569, 1862, 1892
Bse118I RCCGGY 3 cut(s) 297, 418, 1631
Bse1I ACTGG 6 cut(s) 167, 200, 969, 1116, 1155, 1457
Bse3DI GCAATG 3 cut(s) 800, 3047, 3188
Bse8I GATNNNNATC 2 cut(s) 2480, 2762
BseAI TCCGGA 2 cut(s) 703, 1880
BseBI CCWGG 1 cut(s) 2621
BseDI CCNNGG 5 cut(s) 347, 838, 1932, 2095, 2619
BseGI GGATG 7 cut(s) 931, 990, 1793, 2956, 3013, 3097, 3152
BseJI GATNNNNATC 2 cut(s) 2480, 2762
BseMI GCAATG 3 cut(s) 800, 3047, 3188
BseMII CTCAG 6 cut(s) 888, 994, 1068, 1183, 2265, 2460
BseNI ACTGG 6 cut(s) 167, 200, 969, 1116, 1155, 1457
BseRI GAGGAG 2 cut(s) 605, 3285
BseSI GKGCMC 1 cut(s) 2164
BseXI GCAGC 9 cut(s) 197, 409, 1310, 1491, 2269, 2272, 2803, 3058, 3197
BsgI GTGCAG 3 cut(s) 426, 623, 2802
Bsh1236I CGCG 2 cut(s) 1392, 2377
BshFI GGCC 4 cut(s) 243, 1956, 2119, 3248
BsiHKAI GWGCWC 1 cut(s) 2164
BsiHKCI CYCGRG 1 cut(s) 406
BslFI GGGAC 3 cut(s) 252, 975, 3121
BsmAI GTCTC 3 cut(s) 291, 1350, 2975
BsmFI GGGAC 3 cut(s) 252, 975, 3121
BsmI GAATGC 1 cut(s) 2519
BsnI GGCC 4 cut(s) 243, 1956, 2119, 3248
BsoBI CYCGRG 1 cut(s) 406
Bsp119I TTCGAA 1 cut(s) 549
Bsp1286I GDGCHC 1 cut(s) 2164
Bsp13I TCCGGA 2 cut(s) 703, 1880
Bsp143I GATC 5 cut(s) 94, 457, 889, 937, 2031
Bsp1720I GCTNAGC 2 cut(s) 1985, 2552
BspANI GGCC 4 cut(s) 243, 1956, 2119, 3248
BspCNI CTCAG 6 cut(s) 889, 993, 1067, 1182, 2264, 2459
BspEI TCCGGA 2 cut(s) 703, 1880
BspFNI CGCG 2 cut(s) 1392, 2377
BspLI GGNNCC 5 cut(s) 268, 340, 470, 1723, 2910
BspMAI CTGCAG 3 cut(s) 58, 2697, 3187
BspMI ACCTGC 1 cut(s) 47
BspPI GGATC 1 cut(s) 2026
BspT104I TTCGAA 1 cut(s) 549
BspTI CTTAAG 1 cut(s) 245
BsrBI CCGCTC 1 cut(s) 2679
BsrDI GCAATG 3 cut(s) 800, 3047, 3188
BsrFI RCCGGY 3 cut(s) 297, 418, 1631
BsrI ACTGG 6 cut(s) 167, 200, 969, 1116, 1155, 1457
BssAI RCCGGY 3 cut(s) 297, 418, 1631
BssECI CCNNGG 5 cut(s) 347, 838, 1932, 2095, 2619
BssMI GATC 5 cut(s) 94, 457, 889, 937, 2031
BssNAI GTATAC 1 cut(s) 2452
BssNI GRCGYC 1 cut(s) 987
BssSI CACGAG 2 cut(s) 1127, 2411
BssT1I CCWWGG 3 cut(s) 347, 1932, 2095
Bst1107I GTATAC 1 cut(s) 2452
Bst2BI CACGAG 2 cut(s) 1127, 2411
Bst2UI CCWGG 1 cut(s) 2621
Bst4CI ACNGT 8 cut(s) 285, 395, 789, 1716, 2159, 2466, 2658, 2896
Bst6I CTCTTC 2 cut(s) 1010, 2362
BstACI GRCGYC 1 cut(s) 987
BstAFI CTTAAG 1 cut(s) 245
BstAPI GCANNNNNTGC 1 cut(s) 2825
BstBI TTCGAA 1 cut(s) 549
BstC8I GCNNGC 5 cut(s) 761, 1220, 1303, 2117, 3178
BstDSI CCRYGG 1 cut(s) 838
BstF5I GGATG 7 cut(s) 931, 990, 1793, 2956, 3013, 3097, 3152
BstFNI CGCG 2 cut(s) 1392, 2377
BstHHI GCGC 3 cut(s) 106, 297, 2379
BstKTI GATC 5 cut(s) 97, 460, 892, 940, 2034
BstMAI GTCTC 3 cut(s) 291, 1350, 2975
BstMBI GATC 5 cut(s) 94, 457, 889, 937, 2031
BstMWI GCNNNNNNNGC 9 cut(s) 210, 620, 765, 1174, 1476, 2285, 2825, 3182, 3227
BstNI CCWGG 1 cut(s) 2621
BstNSI RCATGY 1 cut(s) 2825
BstSCI CCNGG 5 cut(s) 881, 1202, 1891, 1963, 2619
BstSFI CTRYAG 4 cut(s) 54, 2693, 3075, 3183
BstSLI GKGCMC 1 cut(s) 2164
BstUI CGCG 2 cut(s) 1392, 2377
BstV1I GCAGC 9 cut(s) 197, 409, 1310, 1491, 2269, 2272, 2803, 3058, 3197
BstV2I GAAGAC 3 cut(s) 634, 1830, 1901
BstZ17I GTATAC 1 cut(s) 2452
BsuI GTATCC 2 cut(s) 1123, 2894
BsuRI GGCC 4 cut(s) 243, 1956, 2119, 3248
BtgI CCRYGG 1 cut(s) 838
BtgZI GCGATG 1 cut(s) 2613
BtrI CACGTC 1 cut(s) 2779
BtsCI GGATG 7 cut(s) 931, 990, 1793, 2956, 3013, 3097, 3152
BtsI GCAGTG 3 cut(s) 7, 2863, 3180
BtsIMutI CAGTG 7 cut(s) 7, 1162, 2462, 2663, 2863, 3180, 3230
BveI ACCTGC 1 cut(s) 47
Cac8I GCNNGC 5 cut(s) 761, 1220, 1303, 2117, 3178
CfoI GCGC 3 cut(s) 106, 297, 2379
Cfr10I RCCGGY 3 cut(s) 297, 418, 1631
Cfr13I GGNCC 7 cut(s) 165, 241, 266, 1722, 1811, 1955, 2117
CseI GACGC 1 cut(s) 976
Csp6I GTAC 6 cut(s) 391, 915, 1119, 1686, 2172, 2972
CspCI CAANNNNNGTGG 4 cut(s) 673, 708, 820, 855
CviQI GTAC 6 cut(s) 391, 915, 1119, 1686, 2172, 2972
DpnI GATC 5 cut(s) 96, 459, 891, 939, 2033
DpnII GATC 5 cut(s) 94, 457, 889, 937, 2031
DraI TTTAAA 2 cut(s) 1975, 3036
Eam1104I CTCTTC 2 cut(s) 1010, 2362
EarI CTCTTC 2 cut(s) 1010, 2362
Eco130I CCWWGG 3 cut(s) 347, 1932, 2095
Eco32I GATATC 2 cut(s) 1709, 2482
Eco47I GGWCC 4 cut(s) 165, 266, 1722, 1811
Eco57I CTGAAG 1 cut(s) 1895
Eco88I CYCGRG 1 cut(s) 406
EcoO109I RGGNCCY 1 cut(s) 1955
EcoRI GAATTC 2 cut(s) 1994, 3277
EcoRII CCWGG 1 cut(s) 2619
EcoRV GATATC 2 cut(s) 1709, 2482
EcoT14I CCWWGG 3 cut(s) 347, 1932, 2095
ErhI CCWWGG 3 cut(s) 347, 1932, 2095
FaqI GGGAC 3 cut(s) 252, 975, 3121
FauI CCCGC 4 cut(s) 787, 1075, 1385, 2108
FblI GTMKAC 1 cut(s) 2451
FokI GGATG 7 cut(s) 938, 977, 1780, 2963, 3020, 3104, 3139
GlaI GCGC 3 cut(s) 105, 296, 2378
GsuI CTGGAG 4 cut(s) 608, 1138, 2046, 2895
HaeIII GGCC 4 cut(s) 243, 1956, 2119, 3248
HgaI GACGC 1 cut(s) 976
HhaI GCGC 3 cut(s) 106, 297, 2379
Hin1I GRCGYC 1 cut(s) 987
Hin6I GCGC 3 cut(s) 104, 295, 2377
HinP1I GCGC 3 cut(s) 104, 295, 2377
HincII GTYRAC 2 cut(s) 1616, 1734
HindII GTYRAC 2 cut(s) 1616, 1734
HpaI GTTAAC 1 cut(s) 1734
HphI GGTGA 2 cut(s) 529, 947
Hpy166II GTNNAC 5 cut(s) 1616, 1637, 1734, 2162, 2452
Hpy8I GTNNAC 5 cut(s) 1616, 1637, 1734, 2162, 2452
Hpy99I CGWCG 2 cut(s) 2355, 2944
HpyAV CCTTC 8 cut(s) 298, 514, 1683, 1946, 2507, 2530, 2921, 3253
HpyCH4III ACNGT 8 cut(s) 285, 395, 789, 1716, 2159, 2466, 2658, 2896
HpyCH4IV ACGT 3 cut(s) 1406, 2350, 2778
HpyF10VI GCNNNNNNNGC 9 cut(s) 210, 620, 765, 1174, 1476, 2285, 2825, 3182, 3227
HpySE526I ACGT 3 cut(s) 1406, 2350, 2778
Hsp92I GRCGYC 1 cut(s) 987
HspAI GCGC 3 cut(s) 104, 295, 2377
Kpn2I TCCGGA 2 cut(s) 703, 1880
KspAI GTTAAC 1 cut(s) 1734
Kzo9I GATC 5 cut(s) 94, 457, 889, 937, 2031
LmnI GCTCC 5 cut(s) 1093, 1520, 1780, 2684, 2914
Lsp1109I GCAGC 9 cut(s) 197, 409, 1310, 1491, 2269, 2272, 2803, 3058, 3197
LweI GCATC 7 cut(s) 730, 1270, 2077, 2289, 2625, 3082, 3208
MaeII ACGT 3 cut(s) 1406, 2350, 2778
MaeIII GTNAC 5 cut(s) 134, 1407, 2417, 2750, 2774
MalI GATC 5 cut(s) 96, 459, 891, 939, 2033
MbiI CCGCTC 1 cut(s) 2679
MboI GATC 5 cut(s) 94, 457, 889, 937, 2031
MfeI CAATTG 3 cut(s) 1275, 1496, 2630
MhlI GDGCHC 1 cut(s) 2164
MlyI GAGTC 4 cut(s) 760, 2175, 2841, 3257
MmeI TCCRAC 7 cut(s) 207, 1553, 1582, 1789, 2132, 2682, 2878
MroI TCCGGA 2 cut(s) 703, 1880
MroXI GAANNNNTTC 4 cut(s) 555, 2371, 2739, 2935
MspA1I CMGCKG 3 cut(s) 586, 984, 2282
MspCI CTTAAG 1 cut(s) 245
MspR9I CCNGG 5 cut(s) 883, 1204, 1893, 1965, 2621
MunI CAATTG 3 cut(s) 1275, 1496, 2630
Mva1269I GAATGC 1 cut(s) 2519
MvaI CCWGG 1 cut(s) 2621
MvnI CGCG 2 cut(s) 1392, 2377
MwoI GCNNNNNNNGC 9 cut(s) 210, 620, 765, 1174, 1476, 2285, 2825, 3182, 3227
NciI CCSGG 4 cut(s) 883, 1204, 1893, 1965
NdeII GATC 5 cut(s) 94, 457, 889, 937, 2031
NlaIV GGNNCC 5 cut(s) 268, 340, 470, 1723, 2910
NmuCI GTSAC 3 cut(s) 134, 1407, 2774
NspI RCATGY 1 cut(s) 2825
NspV TTCGAA 1 cut(s) 549
PaqCI CACCTGC 1 cut(s) 47
PciI ACATGT 1 cut(s) 2821
PctI GAATGC 1 cut(s) 2519
PdmI GAANNNNTTC 4 cut(s) 555, 2371, 2739, 2935
PflMI CCANNNNNTGG 3 cut(s) 348, 789, 2918
PleI GAGTC 4 cut(s) 759, 2175, 2841, 3257
PpsI GAGTC 4 cut(s) 759, 2175, 2841, 3257
PscI ACATGT 1 cut(s) 2821
PshBI ATTAAT 1 cut(s) 972
Psp6I CCWGG 1 cut(s) 2619
PspGI CCWGG 1 cut(s) 2619
PspN4I GGNNCC 5 cut(s) 268, 340, 470, 1723, 2910
PspPI GGNCC 7 cut(s) 165, 241, 266, 1722, 1811, 1955, 2117
PsrI GAACNNNNNNTAC 2 cut(s) 590, 622
PstI CTGCAG 3 cut(s) 58, 2697, 3187
PvuII CAGCTG 1 cut(s) 586
RsaI GTAC 6 cut(s) 392, 916, 1120, 1687, 2173, 2973
RsaNI GTAC 6 cut(s) 391, 915, 1119, 1686, 2172, 2972
Sau3AI GATC 5 cut(s) 94, 457, 889, 937, 2031
Sau96I GGNCC 7 cut(s) 165, 241, 266, 1722, 1811, 1955, 2117
ScaI AGTACT 1 cut(s) 1120
SchI GAGTC 4 cut(s) 760, 2175, 2841, 3257
ScrFI CCNGG 5 cut(s) 883, 1204, 1893, 1965, 2621
SduI GDGCHC 1 cut(s) 2164
SfaNI GCATC 7 cut(s) 730, 1270, 2077, 2289, 2625, 3082, 3208
SfcI CTRYAG 4 cut(s) 54, 2693, 3075, 3183
SfuI TTCGAA 1 cut(s) 549
SinI GGWCC 4 cut(s) 165, 266, 1722, 1811
SmlI CTYRAG 6 cut(s) 245, 1241, 1474, 1766, 2063, 2489
SmoI CTYRAG 6 cut(s) 245, 1241, 1474, 1766, 2063, 2489
SpeI ACTAGT 1 cut(s) 131
StyD4I CCNGG 5 cut(s) 881, 1202, 1891, 1963, 2619
StyI CCWWGG 3 cut(s) 347, 1932, 2095
TaaI ACNGT 8 cut(s) 285, 395, 789, 1716, 2159, 2466, 2658, 2896
TaiI ACGT 3 cut(s) 1409, 2353, 2781
TaqII GACCGA 1 cut(s) 1067
TatI WGTACW 2 cut(s) 1118, 2971
TauI GCSGC 3 cut(s) 216, 987, 2282
TscAI CASTG 7 cut(s) 14, 1162, 2469, 2663, 2863, 3187, 3237
TseFI GTSAC 3 cut(s) 134, 1407, 2774
TseI GCWGC 9 cut(s) 210, 422, 1298, 1479, 2282, 2285, 2816, 3071, 3185
Tsp45I GTSAC 3 cut(s) 134, 1407, 2774
TspGWI ACGGA 8 cut(s) 693, 827, 1421, 2552, 2888, 3020, 3125, 3145
TspRI CASTG 7 cut(s) 14, 1162, 2469, 2663, 2863, 3187, 3237
Van91I CCANNNNNTGG 3 cut(s) 348, 789, 2918
Vha464I CTTAAG 1 cut(s) 245
VneI GTGCAC 1 cut(s) 2160
VpaK11BI GGWCC 4 cut(s) 165, 266, 1722, 1811
VspI ATTAAT 1 cut(s) 972
XapI RAATTY 6 cut(s) 1333, 1994, 2074, 2103, 3031, 3277
XceI RCATGY 1 cut(s) 2825
XcmI CCANNNNNNNNNTGG 1 cut(s) 1755
XmiI GTMKAC 1 cut(s) 2451
XmnI GAANNNNTTC 4 cut(s) 555, 2371, 2739, 2935
ZrmI AGTACT 1 cut(s) 1120
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.