Rh5CG096000

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000058
Physical Location & Seq
Reverse (-)
7634789 .. 7639641
4853 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG096000.1

Sequence Viewer

Length: 3111 bp
ATGGAGAGAGCTCAGTTCTTCCTCTTGTGCATAACATTGTTGCTTTGCATGGCCAGAGCACAAACCAACTTGACGACAGACCAGTCTGCTCTTCTTGCTCTCAAAGCTAATGTCACTAGTGACCCTCAAGACTTGTTGTCCAACTGGTCTACCAATACCTCCGCTTGCAACTGGGTTGGGGTTACTTGTGGTCATGTCCATCTTAGAGTCGCTGCCTTGAATCTCTCTTATTTTGGCCTCACAGGTAGAATTCCTCCGGAGCTAGGAAACCTTTCATTTCTTGTTGTGCTACGCTTGAGAAACAACAGTTTTAATGGCACTTTGCCTGTGGAATTGGCTGGTTTGCGCCGATTGAAGTTGGTTAACTTCAAATACAATAACTTTATGGGGGAGATTCCATCATGGTTTGGGTCCTTATCCAGTCTTAAAGCCTTGAATTTGTATGGGAATCGGTTCACAGGATCCATACCTGCTGCTATCTTCAACTTATCTGCTCTGCAAGTATTTGATCTGAGAAATAACCAGCTATCAGGTAGCATACCGAGAGAAATCGCGAACTTAACAATGCTGAAGCATTTATACCTTGACAATAACAATTTCCAAGAAATTTCGGATGAGATCGGCAGTTTACATCAGCTGGATTTGCTGTCTATGCAATACAATGGCCTAAAAGGGCGTGTTCCTTTGGTTTTCTTCAACATGTCTTCTTTGACTATTTTGGGCCTTTCAGGAAACAGTTTCAGTGGTCGTCTTCCTGACAATATATGTCAGAATCTTCCTAGTATTCAAAGGTTGTACTTTTCTATCAACCAGTTTGATGGTCCACTTCCATCCCAATTATGGCAATGCAAACAGCTTCTTGTATTGTCATTATCTGTTAACAATTTCAGTGGAAGTATACCCAGAAATATTGGCAACTTGACTAAGTTACAGAAGATTTATCTAGACTTCAACAATTTGACAGGTACTATTCCGCATGAGATTGGCTATCTTCAAAATTTAGAGATATTGTCACTCCTTGCTAACTCATTTTCTGGGTCCATTCCTACCACACTCTGTGCCTTAACAGAACTCCTGTCACTTAACTTGGGCAAGAATAAGTTAACCATTGATACTTCTACTCCAGAAGCCAACATTTTCTCTTGTTTGGCCAATCTTAAAAATTTGTGGAGATTAAATTTGTCAAGCAATCCATTATATGCCACGCTTCCTGTTTCCCTCAAGAACTTCTCTACATCCCTTCAATATCTGGGTATGAGCAGTTGCAACATAGGGGGTAACATTCCCAACGGTATTGGCAACTTGAGCAACTTGACAGTCTTAGACTTGGGATACAATCAACTGGGTGGATCAATTCCAACTACAATGGGAAGACTACAGAACCTCCAAGGTTTGTACTTGACTGATAACAAATTGCAAGGATTTATTCCGGATGAACTTTGTCAACTAAACAATCTAGTTGACTTAGTTTTGGGTGGTAATCAACTTTCTGGTTCTGTACCTTCCTGCTTGGGTAATCTAACAGCTCTAAGAACTCTGTCATTAGGGTCCAATTCTTTAACTTCAACAGTACCATCTGCAGTGTGGGGACTTACATATGTCTTACACATAAACTTGTCATCCAATTCTCTACTTGGTCCTATCTCAGCAGATGTTGGAAATTTAAGAGTTGTCACAAATATAGATTTGTCAAGGAACAACTTTTCAGGTACTATACCAAGCAACATTGGGTCGCTTGAAAACTTGGTTAATCTCTCCTTGGCAAATAACAATCTCGAAGGCCCAATTCCCAGTTCATTTGGCAACTTAGGAAGCCTGGAGCTCTTGGATCTATCCAGAAACAATCTATCTGGAATCATTCCAGATTCTTTACAAGCGCTCTTGCATCTCAGGTATCTGAATTTGTCTTTCAACAAACTCCATGGAGAAATTCCAACAGGTGGACCTTTCAAAAACTTCTCTGTTCAGTCATTTCTCTCAAATGATGGACTATGTGGTGCATCCCAGCTTGATTTTCGACCATGCAGAACCCCTGTACAATATTCAAGGACAGCTAGTTCATCTATGTTGAAATATATTATTCCAGGGATGTTGGCAGCAATGCTTGTATTGACCTTCATATGGTTGTTCACACTACACAAAAAAGGGGATGCAGAGGTTGCAACAGAGCATACCTTAATACCTGAGCTTCTTCGGAAAAAAGTTACATACCAAGAAATTCTAACTGCTACAAATGGCTTCAATGAAACCAACTTACTTGGCTCTGGGGGATTTGGCTCAGTGTATAAAGGAATACTTTCAAATGGGATAGCGGTTGCTATAAAGGTGTTCAATTTACAACATGAAGAGGCTTTCAAAAAATTTGATGTTGAAAGTGAACTGCTAAGCAATGTTTGTCATCACAATCTTATCAAAATCATCGGTAGTTGCAACCAAAGTCATTTCAAAGCCTTGGTACTTGACTACATGCCTAATGGGAGCCTCGAGAGGTTGCTGTATTCTGAAGAATACTGTTCTTTGAAAATCCTAGAGAGGTTGAACATAATGATAGATGTTGCATCGGCGTTGGAATACCTTCATCATGGTTATTCAATACCAATTGTCCATTGTGATTTGAAGCCAAGCAATATACTACTAGACAATGATATGGTTGCACATGTTGCTGATTTTGGCATTGCAAAACTCTTGGGTGGAGGGGATACTGTGACCGAAACCCTGACACTAGCTACGGTTGGGTATATGGCTCCAGAATATGGAATAGAAGGAATAGTTACCAGAAAAGGGGATGTGTACAGTTTTGGTATAGTATTAATGGAGACTTTCACAAAAAAGAAGCCTACAGATGAGATATTTGTTGGGGAAATGAGTTTAAAGCGATGGGTTGCAGATTCGTTACTTTCAGATGCAGTACTTGAAGTTGTGGATGGCAGTTTACTTGGGAAAGACGAAGATCATGATTTTGTGAATAAGAGGGATTGTTTATCTTCCATTATGAGGTTGGCACTAGATTGTTCTGCAGAATCAGTTGAAGAGAGGGTAAGTATGCAAGATGCAGCAGTCACACTCCATAAAATCAAGAACAATTTTTTGAAGGACATTGGAGGTGTGTGA

Protein Analysis

1036

Amino Acids

113.23

Weight (kDa)

6.08

Isoelectric Point (pI)

32.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 26 - 63 2.1e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 66 - 148 4.3e-07 Leucine-rich repeat region
LRR_8 PF13855 133 - 176 1.9e-06 Leucine rich repeat
LRR_14 PF23598 137 - 197 6.1e-06 Leucine-rich repeat region
LRR_8 PF13855 155 - 200 2.8e-07 Leucine rich repeat
LRR_14 PF23598 162 - 266 1.5e-09 Leucine-rich repeat region
LRR_8 PF13855 190 - 246 3.8e-06 Leucine rich repeat
LRR_14 PF23598 278 - 395 6.2e-09 Leucine-rich repeat region
LRR_14 PF23598 413 - 517 2.7e-11 Leucine-rich repeat region
LRR_8 PF13855 436 - 496 3e-09 Leucine rich repeat
LRR_14 PF23598 546 - 640 1.2e-07 Leucine-rich repeat region
LRR_8 PF13855 581 - 640 1.9e-10 Leucine rich repeat
Pkinase PF00069 748 - 1017 1.3e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 751 - 1017 1.5e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 82
Acc36I ACCTGC 1 cut(s) 478
AccB7I CCANNNNNTGG 2 cut(s) 1940, 2753
AccI GTMKAC 2 cut(s) 149, 898
AccII CGCG 1 cut(s) 554
AccIII TCCGGA 2 cut(s) 256, 1429
AciI CCGC 3 cut(s) 162, 974, 2312
AclWI GGATC 4 cut(s) 456, 469, 1357, 1836
AcoI YGGCCR 2 cut(s) 51, 1149
AcuI CTGAAG 2 cut(s) 590, 2523
AdeI CACNNNGTG 1 cut(s) 1058
AfeI AGCGCT 1 cut(s) 1878
AfiI CCNNNNNNNGG 7 cut(s) 263, 840, 1940, 2121, 2753, 2781, 2994
AflIII ACRYGT 2 cut(s) 699, 2656
AhdI GACNNNNNGTC 1 cut(s) 136
AhlI ACTAGT 1 cut(s) 116
AjnI CCWGG 2 cut(s) 1815, 2083
AjuI GAANNNNNNNTTGG 2 cut(s) 1777, 1809
AloI GAACNNNNNNTCC 2 cut(s) 2041, 2073
Alw21I GWGCWC 3 cut(s) 13, 61, 1824
Alw26I GTCTC 1 cut(s) 2810
AlwI GGATC 4 cut(s) 456, 469, 1357, 1836
Ama87I CYCGRG 1 cut(s) 2483
Aor13HI TCCGGA 2 cut(s) 256, 1429
Aor51HI AGCGCT 1 cut(s) 1878
AoxI GGCC 6 cut(s) 51, 235, 664, 721, 1149, 1780
ApeKI GCWGC 4 cut(s) 212, 473, 2096, 3053
ArsI GACNNNNNNTTYG 2 cut(s) 96, 128
AseI ATTAAT 1 cut(s) 2810
Asp700I GAANNNNTTC 4 cut(s) 271, 452, 2296, 2574
AspLEI GCGC 2 cut(s) 348, 1879
AspS9I GGNCC 8 cut(s) 411, 721, 821, 1038, 1548, 1637, 1781, 1943
AvaI CYCGRG 1 cut(s) 2483
AvaII GGWCC 6 cut(s) 411, 821, 1038, 1548, 1637, 1943
BalI TGGCCA 2 cut(s) 53, 1151
BamHI GGATCC 1 cut(s) 461
BanII GRGCYC 2 cut(s) 13, 1824
BarI GAAGNNNNNNTAC 2 cut(s) 563, 595
BbsI GAAGAC 3 cut(s) 696, 743, 1378
Bbv12I GWGCWC 3 cut(s) 13, 61, 1824
BbvI GCAGC 4 cut(s) 199, 460, 2108, 3065
BccI CCATC 8 cut(s) 207, 406, 812, 838, 1582, 1979, 2871, 2918
BciT130I CCWGG 2 cut(s) 1817, 2085
BciVI GTATCC 2 cut(s) 1325, 2692
BcoDI GTCTC 1 cut(s) 2810
BcuI ACTAGT 1 cut(s) 116
BfmI CTRYAG 4 cut(s) 1376, 1578, 2838, 3015
BfoI RGCGCY 1 cut(s) 1880
BfuAI ACCTGC 1 cut(s) 478
BfuI GTATCC 2 cut(s) 1325, 2692
BisI GCNGC 4 cut(s) 213, 474, 2097, 3054
BlpI GCTNAGC 1 cut(s) 2384
BlsI GCNGC 4 cut(s) 214, 475, 2098, 3055
BmcAI AGTACT 1 cut(s) 2910
Bme1390I CCNGG 2 cut(s) 1817, 2085
Bme18I GGWCC 6 cut(s) 411, 821, 1038, 1548, 1637, 1943
BmeRI GACNNNNNGTC 1 cut(s) 136
BmeT110I CYCGRG 1 cut(s) 2483
BmgT120I GGNCC 8 cut(s) 411, 721, 821, 1038, 1548, 1637, 1781, 1943
BmiI GGNNCC 6 cut(s) 412, 463, 1039, 1549, 2480, 2745
BmrFI CCNGG 2 cut(s) 1817, 2085
BmrI ACTGGG 3 cut(s) 181, 1352, 1785
BmsI GCATC 6 cut(s) 1894, 2009, 2140, 2567, 2893, 3040
BmuI ACTGGG 3 cut(s) 181, 1352, 1785
BpiI GAAGAC 3 cut(s) 696, 743, 1378
BpmI CTGGAG 3 cut(s) 1107, 1838, 2730
Bpu10I CCTNAGC 1 cut(s) 2184
Bpu1102I GCTNAGC 1 cut(s) 2384
BpuEI CTTGAG 4 cut(s) 111, 316, 1205, 1324
BsaJI CCNNGG 5 cut(s) 1387, 1758, 1921, 2084, 2451
BsaWI WCCGGW 2 cut(s) 256, 1429
BsaXI ACNNNNNCTCC 4 cut(s) 1105, 1135, 1368, 1398
Bsc4I CCNNNNNNNGG 7 cut(s) 263, 840, 1940, 2121, 2753, 2781, 2994
Bse1I ACTGG 7 cut(s) 82, 149, 176, 420, 811, 1347, 1791
Bse3DI GCAATG 4 cut(s) 851, 2106, 2395, 2673
BseAI TCCGGA 2 cut(s) 256, 1429
BseBI CCWGG 2 cut(s) 1817, 2085
BseDI CCNNGG 5 cut(s) 1387, 1758, 1921, 2084, 2451
BseLI CCNNNNNNNGG 7 cut(s) 263, 840, 1940, 2121, 2753, 2781, 2994
BseMI GCAATG 4 cut(s) 851, 2106, 2395, 2673
BseMII CTCAG 6 cut(s) 26, 503, 1659, 1903, 2175, 2292
BseNI ACTGG 7 cut(s) 82, 149, 176, 420, 811, 1347, 1791
BseXI GCAGC 4 cut(s) 199, 460, 2108, 3065
BseYI CCCAGC 1 cut(s) 2004
Bsh1236I CGCG 1 cut(s) 554
BshFI GGCC 6 cut(s) 53, 237, 666, 723, 1151, 1782
BsiHKAI GWGCWC 3 cut(s) 13, 61, 1824
BsiHKCI CYCGRG 1 cut(s) 2483
BsiSI CCGG 2 cut(s) 257, 1430
BslFI GGGAC 1 cut(s) 1602
BslI CCNNNNNNNGG 7 cut(s) 263, 840, 1940, 2121, 2753, 2781, 2994
BsmAI GTCTC 1 cut(s) 2810
BsmFI GGGAC 1 cut(s) 1602
BsnI GGCC 6 cut(s) 53, 237, 666, 723, 1151, 1782
BsoBI CYCGRG 1 cut(s) 2483
Bsp1286I GDGCHC 3 cut(s) 13, 61, 1824
Bsp13I TCCGGA 2 cut(s) 256, 1429
Bsp1407I TGTACA 2 cut(s) 2035, 2790
Bsp143I GATC 6 cut(s) 461, 508, 618, 1349, 1828, 2950
Bsp1720I GCTNAGC 1 cut(s) 2384
Bsp19I CCATGG 1 cut(s) 1921
Bsp68I TCGCGA 1 cut(s) 554
BspACI CCGC 3 cut(s) 162, 974, 2312
BspANI GGCC 6 cut(s) 53, 237, 666, 723, 1151, 1782
BspCNI CTCAG 6 cut(s) 25, 504, 1658, 1902, 2176, 2291
BspEI TCCGGA 2 cut(s) 256, 1429
BspFNI CGCG 1 cut(s) 554
BspHI TCATGA 1 cut(s) 2953
BspLI GGNNCC 6 cut(s) 412, 463, 1039, 1549, 2480, 2745
BspMAI CTGCAG 2 cut(s) 1582, 3019
BspMI ACCTGC 1 cut(s) 478
BspPI GGATC 4 cut(s) 456, 469, 1357, 1836
BspQI GCTCTTC 1 cut(s) 96
BsrDI GCAATG 4 cut(s) 851, 2106, 2395, 2673
BsrGI TGTACA 2 cut(s) 2035, 2790
BsrI ACTGG 7 cut(s) 82, 149, 176, 420, 811, 1347, 1791
BssECI CCNNGG 5 cut(s) 1387, 1758, 1921, 2084, 2451
BssMI GATC 6 cut(s) 461, 508, 618, 1349, 1828, 2950
BssNAI GTATAC 1 cut(s) 899
BssT1I CCWWGG 4 cut(s) 1387, 1758, 1921, 2451
Bst1107I GTATAC 1 cut(s) 899
Bst2UI CCWGG 2 cut(s) 1817, 2085
Bst4CI ACNGT 9 cut(s) 308, 737, 1292, 1318, 1570, 2513, 2704, 2731, 2795
Bst6I CTCTTC 3 cut(s) 96, 2340, 3024
BstAPI GCANNNNNTGC 2 cut(s) 2159, 2660
BstAUI TGTACA 2 cut(s) 2035, 2790
BstC8I GCNNGC 1 cut(s) 166
BstDSI CCRYGG 1 cut(s) 1921
BstFNI CGCG 1 cut(s) 554
BstH2I RGCGCY 1 cut(s) 1880
BstHHI GCGC 2 cut(s) 348, 1879
BstKTI GATC 6 cut(s) 464, 511, 621, 1352, 1831, 2953
BstMAI GTCTC 1 cut(s) 2810
BstMBI GATC 6 cut(s) 461, 508, 618, 1349, 1828, 2950
BstMWI GCNNNNNNNGC 7 cut(s) 95, 104, 643, 652, 1305, 2159, 2660
BstNI CCWGG 2 cut(s) 1817, 2085
BstNSI RCATGY 3 cut(s) 703, 2470, 2660
BstSCI CCNGG 2 cut(s) 1815, 2083
BstSFI CTRYAG 4 cut(s) 1376, 1578, 2838, 3015
BstUI CGCG 1 cut(s) 554
BstV1I GCAGC 4 cut(s) 199, 460, 2108, 3065
BstV2I GAAGAC 3 cut(s) 696, 743, 1378
BstX2I RGATCY 2 cut(s) 461, 1828
BstXI CCANNNNNNTGG 1 cut(s) 818
BstYI RGATCY 2 cut(s) 461, 1828
BstZ17I GTATAC 1 cut(s) 899
BsuI GTATCC 2 cut(s) 1325, 2692
BsuRI GGCC 6 cut(s) 53, 237, 666, 723, 1151, 1782
BtgI CCRYGG 1 cut(s) 1921
BtgZI GCGATG 1 cut(s) 2890
BtsI GCAGTG 1 cut(s) 1587
BtsIMutI CAGTG 4 cut(s) 748, 895, 1587, 2286
BtuMI TCGCGA 1 cut(s) 554
BveI ACCTGC 1 cut(s) 478
Cac8I GCNNGC 1 cut(s) 166
CciI TCATGA 1 cut(s) 2953
CfoI GCGC 2 cut(s) 348, 1879
Cfr13I GGNCC 8 cut(s) 411, 721, 821, 1038, 1548, 1637, 1781, 1943
CspCI CAANNNNNGTGG 2 cut(s) 871, 906
DpnI GATC 6 cut(s) 463, 510, 620, 1351, 1830, 2952
DpnII GATC 6 cut(s) 461, 508, 618, 1349, 1828, 2950
DraI TTTAAA 1 cut(s) 2871
DraIII CACNNNGTG 1 cut(s) 1058
DrdI GACNNNNNNGTC 1 cut(s) 82
DriI GACNNNNNGTC 1 cut(s) 136
DseDI GACNNNNNNGTC 1 cut(s) 82
EaeI YGGCCR 2 cut(s) 51, 1149
Eam1104I CTCTTC 3 cut(s) 96, 2340, 3024
Eam1105I GACNNNNNGTC 1 cut(s) 136
EarI CTCTTC 3 cut(s) 96, 2340, 3024
Ecl136II GAGCTC 2 cut(s) 11, 1822
Eco130I CCWWGG 4 cut(s) 1387, 1758, 1921, 2451
Eco24I GRGCYC 2 cut(s) 13, 1824
Eco47I GGWCC 6 cut(s) 411, 821, 1038, 1548, 1637, 1943
Eco47III AGCGCT 1 cut(s) 1878
Eco53kI GAGCTC 2 cut(s) 11, 1822
Eco57I CTGAAG 2 cut(s) 590, 2523
Eco88I CYCGRG 1 cut(s) 2483
EcoICRI GAGCTC 2 cut(s) 11, 1822
EcoO109I RGGNCCY 1 cut(s) 411
EcoRI GAATTC 1 cut(s) 249
EcoRII CCWGG 2 cut(s) 1815, 2083
EcoT14I CCWWGG 4 cut(s) 1387, 1758, 1921, 2451
EcoT38I GRGCYC 2 cut(s) 13, 1824
ErhI CCWWGG 4 cut(s) 1387, 1758, 1921, 2451
FalI AAGNNNNNCTT 2 cut(s) 2280, 2312
FaqI GGGAC 1 cut(s) 1602
FauNDI CATATG 2 cut(s) 1597, 2120
FblI GTMKAC 2 cut(s) 149, 898
Fnu4HI GCNGC 4 cut(s) 213, 474, 2097, 3054
FriOI GRGCYC 2 cut(s) 13, 1824
Fsp4HI GCNGC 4 cut(s) 213, 474, 2097, 3054
GlaI GCGC 2 cut(s) 347, 1878
GluI GCNGC 4 cut(s) 213, 474, 2097, 3054
GsaI CCCAGC 1 cut(s) 2008
GsuI CTGGAG 3 cut(s) 1107, 1838, 2730
HaeII RGCGCY 1 cut(s) 1880
HaeIII GGCC 6 cut(s) 53, 237, 666, 723, 1151, 1782
HapII CCGG 2 cut(s) 257, 1430
HhaI GCGC 2 cut(s) 348, 1879
Hin6I GCGC 2 cut(s) 346, 1877
HinP1I GCGC 2 cut(s) 346, 1877
HincII GTYRAC 5 cut(s) 364, 880, 1104, 1445, 1462
HindII GTYRAC 5 cut(s) 364, 880, 1104, 1445, 1462
HinfI GANTC 9 cut(s) 207, 220, 394, 448, 772, 1854, 1865, 2888, 3020
HpaI GTTAAC 3 cut(s) 364, 880, 1104
HpaII CCGG 2 cut(s) 257, 1430
Hpy188I TCNGA 7 cut(s) 513, 613, 771, 1899, 2196, 2503, 2902
HpyAV CCTTC 7 cut(s) 1250, 1512, 1772, 2125, 2585, 2756, 3085
HpyCH4III ACNGT 9 cut(s) 308, 737, 1292, 1318, 1570, 2513, 2704, 2731, 2795
HpyF10VI GCNNNNNNNGC 7 cut(s) 95, 104, 643, 652, 1305, 2159, 2660
HspAI GCGC 2 cut(s) 346, 1877
Kpn2I TCCGGA 2 cut(s) 256, 1429
KspAI GTTAAC 3 cut(s) 364, 880, 1104
Kzo9I GATC 6 cut(s) 461, 508, 618, 1349, 1828, 2950
LguI GCTCTTC 1 cut(s) 96
LmnI GCTCC 4 cut(s) 259, 1819, 2478, 2749
Lsp1109I GCAGC 4 cut(s) 199, 460, 2108, 3065
LweI GCATC 6 cut(s) 1894, 2009, 2140, 2567, 2893, 3040
MalI GATC 6 cut(s) 463, 510, 620, 1351, 1830, 2952
MboI GATC 6 cut(s) 461, 508, 618, 1349, 1828, 2950
MfeI CAATTG 1 cut(s) 2598
MflI RGATCY 2 cut(s) 461, 1828
MhlI GDGCHC 3 cut(s) 13, 61, 1824
MlsI TGGCCA 2 cut(s) 53, 1151
MluNI TGGCCA 2 cut(s) 53, 1151
MlyI GAGTC 1 cut(s) 216
MmeI TCCRAC 5 cut(s) 165, 1382, 1636, 1958, 2547
Mox20I TGGCCA 2 cut(s) 53, 1151
MroI TCCGGA 2 cut(s) 256, 1429
MroXI GAANNNNTTC 4 cut(s) 271, 452, 2296, 2574
MscI TGGCCA 2 cut(s) 53, 1151
Msp20I TGGCCA 2 cut(s) 53, 1151
MspA1I CMGCKG 1 cut(s) 637
MspI CCGG 2 cut(s) 257, 1430
MspR9I CCNGG 2 cut(s) 1817, 2085
MunI CAATTG 1 cut(s) 2598
MvaI CCWGG 2 cut(s) 1817, 2085
MvnI CGCG 1 cut(s) 554
MwoI GCNNNNNNNGC 7 cut(s) 95, 104, 643, 652, 1305, 2159, 2660
NcoI CCATGG 1 cut(s) 1921
NdeI CATATG 2 cut(s) 1597, 2120
NdeII GATC 6 cut(s) 461, 508, 618, 1349, 1828, 2950
NlaIV GGNNCC 6 cut(s) 412, 463, 1039, 1549, 2480, 2745
NmuCI GTSAC 7 cut(s) 112, 119, 1011, 1077, 1672, 2704, 3058
NruI TCGCGA 1 cut(s) 554
NspI RCATGY 3 cut(s) 703, 2470, 2660
PaeR7I CTCGAG 1 cut(s) 2483
PagI TCATGA 1 cut(s) 2953
PciI ACATGT 2 cut(s) 699, 2656
PciSI GCTCTTC 1 cut(s) 96
PdmI GAANNNNTTC 4 cut(s) 271, 452, 2296, 2574
PfeI GAWTC 8 cut(s) 220, 394, 448, 772, 1854, 1865, 2888, 3020
PflMI CCANNNNNTGG 2 cut(s) 1940, 2753
PkrI GCNGC 4 cut(s) 214, 475, 2098, 3055
PleI GAGTC 1 cut(s) 215
PpsI GAGTC 1 cut(s) 215
PpuMI RGGWCCY 1 cut(s) 411
PscI ACATGT 2 cut(s) 699, 2656
PshBI ATTAAT 1 cut(s) 2810
Psp124BI GAGCTC 2 cut(s) 13, 1824
Psp5II RGGWCCY 1 cut(s) 411
Psp6I CCWGG 2 cut(s) 1815, 2083
PspFI CCCAGC 1 cut(s) 2004
PspGI CCWGG 2 cut(s) 1815, 2083
PspN4I GGNNCC 6 cut(s) 412, 463, 1039, 1549, 2480, 2745
PspPI GGNCC 8 cut(s) 411, 721, 821, 1038, 1548, 1637, 1781, 1943
PspPPI RGGWCCY 1 cut(s) 411
PstI CTGCAG 2 cut(s) 1582, 3019
PsuI RGATCY 2 cut(s) 461, 1828
PvuII CAGCTG 1 cut(s) 637
RruI TCGCGA 1 cut(s) 554
SacI GAGCTC 2 cut(s) 13, 1824
SapI GCTCTTC 1 cut(s) 96
SatI GCNGC 4 cut(s) 213, 474, 2097, 3054
Sau3AI GATC 6 cut(s) 461, 508, 618, 1349, 1828, 2950
Sau96I GGNCC 8 cut(s) 411, 721, 821, 1038, 1548, 1637, 1781, 1943
ScaI AGTACT 1 cut(s) 2910
SchI GAGTC 1 cut(s) 216
ScrFI CCNGG 2 cut(s) 1817, 2085
SduI GDGCHC 3 cut(s) 13, 61, 1824
SfaNI GCATC 6 cut(s) 1894, 2009, 2140, 2567, 2893, 3040
SfcI CTRYAG 4 cut(s) 1376, 1578, 2838, 3015
Sfr274I CTCGAG 1 cut(s) 2483
SinI GGWCC 6 cut(s) 411, 821, 1038, 1548, 1637, 1943
SlaI CTCGAG 1 cut(s) 2483
SmlI CTYRAG 5 cut(s) 126, 295, 1220, 1303, 2483
SmoI CTYRAG 5 cut(s) 126, 295, 1220, 1303, 2483
SpeI ACTAGT 1 cut(s) 116
SsiI CCGC 3 cut(s) 162, 974, 2312
SspI AATATT 2 cut(s) 910, 2042
SstI GAGCTC 2 cut(s) 13, 1824
StyD4I CCNGG 2 cut(s) 1815, 2083
StyI CCWWGG 4 cut(s) 1387, 1758, 1921, 2451
TaaI ACNGT 9 cut(s) 308, 737, 1292, 1318, 1570, 2513, 2704, 2731, 2795
TaqI TCGA 3 cut(s) 1776, 2017, 2484
TaqII GACCGA 1 cut(s) 2723
TatI WGTACW 5 cut(s) 795, 1395, 2035, 2790, 2908
TfiI GAWTC 8 cut(s) 220, 394, 448, 772, 1854, 1865, 2888, 3020
TscAI CASTG 4 cut(s) 748, 895, 1587, 2286
TseFI GTSAC 7 cut(s) 112, 119, 1011, 1077, 1672, 2704, 3058
TseI GCWGC 4 cut(s) 212, 473, 2096, 3053
Tsp45I GTSAC 7 cut(s) 112, 119, 1011, 1077, 1672, 2704, 3058
TspDTI ATGAA 8 cut(s) 264, 1449, 1785, 2049, 2107, 2259, 2358, 2567
TspRI CASTG 4 cut(s) 748, 895, 1587, 2286
Van91I CCANNNNNTGG 2 cut(s) 1940, 2753
VpaK11BI GGWCC 6 cut(s) 411, 821, 1038, 1548, 1637, 1943
VspI ATTAAT 1 cut(s) 2810
XbaI TCTAGA 1 cut(s) 943
XceI RCATGY 3 cut(s) 703, 2470, 2660
XcmI CCANNNNNNNNNTGG 3 cut(s) 837, 1581, 2995
XhoI CTCGAG 1 cut(s) 2483
XmiI GTMKAC 2 cut(s) 149, 898
XmnI GAANNNNTTC 4 cut(s) 271, 452, 2296, 2574
ZrmI AGTACT 1 cut(s) 2910
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.