RchiOBHm_Chr5g0040131

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
34844668 .. 34848867
4200 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31865

Sequence Viewer

Length: 2691 bp
ATGGCTATCTTCAACATATCTTCTTTGACTACTTTGACTTTTTATGGAAACAACTTGAGCGGTAGTCTTTCAGATAATATATGCCAACATCTTCCTAGCATTCAAGTGTTGGATTTTTCTTACAACCAGTTTCATGGTCCACTTCCATCCAAATGTTGGCAATGCAAACGACTTCTTCAGTTAGGATTGTCGAATAACAATTTTAATGGAAGTATACCTAACAATATTGGGAACTTAACCCAAATAAAGGCGATATACCTTGACATAAATCACCTGACAGGTACTGGCCCGGTAAACTTCAACTTCAACTTGATTCTATATTGTACTATTCCACATGAGATTGGTCAGCTTCCATATTTGGAGGAATTGTTCCTCGGTATTAATAATCTCAGAGGGCTGATTCCATCCTCAATCTTCAATATGTCCACAATAATGAAGATATCGCTTAGCAACAATCAGCTCTCAGGTAACCTCCCAACAAACATAGGTCATAGGATTCCAATCCTTCAAGAGCTATACCTAGGAATAAATAAACTTAGTGGAGTAATCCCCAAATCCATCTCCAATGTTTCTAAGCTCACGGATCTAGACCTAGACCGAAACTTTTTTTCTGGCTTTATTCCAAGCACACTTTGTGTCTTAACGAACCTTGAACAACTTAAGTTATTCCATAATAACTTGACCATTGATAGTTCGACTCCAGAAGTAAATATTCTCTCTTGTTTGGCAAATCTTAAGAATTTAAAGGAATTAGCCTTCTCAACCAATCCATTAAATGTCAGGCTTCCAGTTTCCTTTAAGAATCTCTCTACATCACTCCAATATATTTATTTAAGCAATTGCAACATGAGAGGTAACATCCCCAATGATATAGGCAACTTGAGCAACTTGATAGTCTTGAACTTGGCAGAAAATCAATTGAGTGGATTGATTCCAACCTCAACACGAAGACTATATAATCTCCAAGGTTTGTATTTATATGACAACAGATTGCAAGGATACATCCCGAATGAAGTTTGTCAACTAAACTACCTAGCTGAGTTAATTTTGTATGGGAATCAACTCACTGGTTGCATACCTTCCTGCTTGGGTAATCTAACTGCATCGCTAAGAATTCTATCAATAGGGTCCAATTTGCTGAATTCAACAATACCATCGACCTTGTGGGATCTTACTGATATCTTGCAAGTAAATTTGTCTTCAAATTCTTTGAGTGGATCTCTCTCACAAGGTGTTGGGAATTTGAAGGTTGCCACAGATATATTGTTATCGTACAACCAATTGTCAGGCACTATACCAAGCAACATTGGGGGTCTTCAAGATTTGGTGAATCTCGACTTGGGAAATAATAAACTAGAAGGCTCAATTCCTAGTTCACTTGGCAACTCTTTAAGCCTGAAGTTCTTGGATTTATCCAAAAACCAATTATTTGGAGTGATTCCGAAGTCTCTTGAAGCACTCTCATATCTCCAGTATATGAATTTGTCTTTTAACAAACTCCAAGGTGAAATTCCAACGGATGGACCTTTCAGAAACTTCTCTGCTCAATCATTTGTTTCTAATCATGGACTCTGTGGGCCATCTCGGTTTCATGTTCCACCATGCAAAGAAAGAAGTGGTAGATCTATCTTGAAATATGTCATTCCAGGGATCTTGTCAACAATGCTTATATTGACCTCCATTTGGATGTTGATGTTACACAGAAAAAAGAATGTGAAATATGCAACTGGAACTACCTTGCCTCAACTTCTATGGAGAAGAGTTTCATACCAAGAGCTTCTAAGTACAACAAATGGATTCCATGAAGGTAACTTACTTGGCACTGGGGGTTTTGGCTCAGTATATGCAGGAACACTTTCAGATGGGATAGACGTTGCCATAAAAGTTTTCAATTTAGAGCTAGAAGGAGCATCTACGAGTTTTGATGTTGAATGTGAGATGTTAAGCAATATTCGTCACCGAAATCTTATCAAAGTCATAAGTTGCTGCAGTCAAATTGATTTCAAAGCGGTTGTACTGAACTATATGCCTAATGGGAGCCTTGACAAGTGGTTATATTCTCCGAACTATTCCTTGAATATCCTGCAGAGGTTGAATATATTGATAGATGTTGCATCGGCATTGGAGTATCTTCATCATGGTTATGAAACACCTATTGTGCATTGTGATTTGAAGCCCAGAAACATATTACTAGACAATGATATGGGTGCACATGTTACTGACTTTGGTATTGCAAAACTCTTGGGCGGAGGAGATTCTATGACTCGCACCATGACCCTAGCCACAATTGGTTATATGGCTCCAGAGTATGGGATGGAAGGAATAATTACCAAAGGAGCGGATCTGTATAGTTTTGGTATTGTAATGATGGAAACACTCACAAAAAGGAAGCCAACAGATGACATGTTTGTTGGGGAAATGAGTTTGAAGCAATGGGTTGCGAATTCACTGTATGCAAATGCGGTAGTTGATGTCGTGGACACCGATTTACTTCAGACAGAGGAGGATGATGAAATTGTGAGCAAGAGAGATTGTTTATCATCCCTTATGCAATTGGCTCTTTCTTGTTCTGCAGAATTATCAGAAGAGAGAATAAACATGCAAGAGGCTTTAGCCACCCTTAACAAAATCAAGATCAAGTTTTTGAAAAACGCTGCAGCAGTGGTGTTGAACCCTAGAGCTGAGATTTGA

Protein Analysis

896

Amino Acids

98.78

Weight (kDa)

6.14

Isoelectric Point (pI)

36.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 169 - 227 4.1e-08 Leucine rich repeat
LRR_14 PF23598 272 - 378 5.1e-07 Leucine-rich repeat region
LRR_8 PF13855 296 - 355 5.3e-06 Leucine rich repeat
Pkinase PF00069 600 - 872 3.6e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 603 - 872 2.5e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 3 cut(s) 156, 1520, 2309
AccBSI CCGCTC 2 cut(s) 60, 2339
AccI GTMKAC 1 cut(s) 214
AciI CCGC 5 cut(s) 60, 2009, 2247, 2339, 2462
AclWI GGATC 5 cut(s) 591, 1176, 1225, 1658, 2349
AcsI RAATTY 9 cut(s) 739, 1113, 1141, 1192, 1204, 1240, 1480, 1509, 2443
AcuI CTGAAG 3 cut(s) 161, 1418, 2477
AdeI CACNNNGTG 2 cut(s) 635, 1232
AfaI GTAC 5 cut(s) 283, 325, 1274, 1786, 2016
AfiI CCNNNNNNNGG 5 cut(s) 156, 247, 1520, 1683, 2309
AflII CTTAAG 2 cut(s) 659, 734
AflIII ACRYGT 2 cut(s) 2212, 2403
AjnI CCWGG 1 cut(s) 1645
AjuI GAANNNNNNNTTGG 4 cut(s) 1322, 1354, 1494, 1526
AloI GAACNNNNNNTCC 2 cut(s) 353, 385
AluBI AGCT 8 cut(s) 349, 460, 514, 577, 1037, 1777, 1900, 2681
AluI AGCT 8 cut(s) 349, 460, 514, 577, 1037, 1777, 1900, 2681
Alw21I GWGCWC 1 cut(s) 2212
Alw26I GTCTC 1 cut(s) 1452
Alw44I GTGCAC 1 cut(s) 2208
AlwI GGATC 5 cut(s) 591, 1176, 1225, 1658, 2349
AlwNI CAGNNNCTG 1 cut(s) 284
AoxI GGCC 2 cut(s) 286, 1577
ApaLI GTGCAC 1 cut(s) 2208
ApeKI GCWGC 3 cut(s) 1986, 2654, 2657
ApoI RAATTY 9 cut(s) 739, 1113, 1141, 1192, 1204, 1240, 1480, 1509, 2443
AseI ATTAAT 1 cut(s) 381
Asp700I GAANNNNTTC 2 cut(s) 1762, 1855
AspA2I CCTAGG 1 cut(s) 520
AspS9I GGNCC 5 cut(s) 137, 287, 1128, 1523, 1577
AsuC2I CCSGG 1 cut(s) 290
AsuHPI GGTGA 4 cut(s) 263, 1339, 1517, 1949
AvaII GGWCC 3 cut(s) 137, 1128, 1523
AvrII CCTAGG 1 cut(s) 520
BaeGI GKGCMC 1 cut(s) 2212
BarI GAAGNNNNNNTAC 2 cut(s) 1797, 1829
BbsI GAAGAC 3 cut(s) 955, 1191, 1307
Bbv12I GWGCWC 1 cut(s) 2212
BbvI GCAGC 3 cut(s) 1973, 2641, 2669
BccI CCATC 9 cut(s) 154, 412, 566, 1162, 1514, 1588, 1856, 2308, 2362
BciT130I CCWGG 1 cut(s) 1647
BciVI GTATCC 1 cut(s) 992
BcnI CCSGG 1 cut(s) 290
BcoDI GTCTC 1 cut(s) 1452
BfmI CTRYAG 4 cut(s) 1987, 2084, 2571, 2655
BfrI CTTAAG 2 cut(s) 659, 734
BfuI GTATCC 1 cut(s) 992
BglII AGATCT 1 cut(s) 1622
BisI GCNGC 3 cut(s) 1987, 2655, 2658
BlnI CCTAGG 1 cut(s) 520
BlpI GCTNAGC 1 cut(s) 446
BlsI GCNGC 3 cut(s) 1988, 2656, 2659
Bme1390I CCNGG 2 cut(s) 290, 1647
Bme18I GGWCC 3 cut(s) 137, 1128, 1523
BmgT120I GGNCC 5 cut(s) 137, 287, 1128, 1523, 1577
BmiI GGNNCC 3 cut(s) 1129, 2039, 2301
BmrFI CCNGG 2 cut(s) 290, 1647
BmrI ACTGGG 1 cut(s) 1833
BmsI GCATC 3 cut(s) 1112, 1919, 2123
BmuI ACTGGG 1 cut(s) 1833
BpiI GAAGAC 3 cut(s) 955, 1191, 1307
BplI GAGNNNNNCTC 2 cut(s) 1204, 1236
BpmI CTGGAG 3 cut(s) 684, 1454, 2286
Bpu1102I GCTNAGC 1 cut(s) 446
BpuEI CTTGAG 2 cut(s) 76, 901
BpuMI CCSGG 1 cut(s) 290
BsaBI GATNNNNATC 1 cut(s) 500
BsaJI CCNNGG 5 cut(s) 373, 520, 964, 1501, 1646
BsaXI ACNNNNNCTCC 2 cut(s) 353, 383
Bsc4I CCNNNNNNNGG 5 cut(s) 156, 247, 1520, 1683, 2309
Bse1I ACTGG 7 cut(s) 127, 289, 788, 1072, 1471, 1732, 1828
Bse3DI GCAATG 2 cut(s) 167, 2438
Bse8I GATNNNNATC 1 cut(s) 500
BseBI CCWGG 1 cut(s) 1647
BseDI CCNNGG 5 cut(s) 373, 520, 964, 1501, 1646
BseGI GGATG 9 cut(s) 146, 404, 858, 1002, 1525, 1692, 2319, 2512, 2540
BseJI GATNNNNATC 1 cut(s) 500
BseLI CCNNNNNNNGG 5 cut(s) 156, 247, 1520, 1683, 2309
BseMI GCAATG 2 cut(s) 167, 2438
BseMII CTCAG 5 cut(s) 403, 477, 1029, 1851, 2673
BseNI ACTGG 7 cut(s) 127, 289, 788, 1072, 1471, 1732, 1828
BseRI GAGGAG 2 cut(s) 2265, 2516
BseSI GKGCMC 1 cut(s) 2212
BseXI GCAGC 3 cut(s) 1973, 2641, 2669
BshFI GGCC 2 cut(s) 288, 1579
BsiHKAI GWGCWC 1 cut(s) 2212
BsiSI CCGG 1 cut(s) 290
BslI CCNNNNNNNGG 5 cut(s) 156, 247, 1520, 1683, 2309
BsmAI GTCTC 1 cut(s) 1452
BsmI GAATGC 1 cut(s) 99
BsnI GGCC 2 cut(s) 288, 1579
Bsp1286I GDGCHC 1 cut(s) 2212
Bsp143I GATC 7 cut(s) 583, 1168, 1217, 1622, 1650, 2341, 2634
Bsp1720I GCTNAGC 1 cut(s) 446
BspACI CCGC 5 cut(s) 60, 2009, 2247, 2339, 2462
BspANI GGCC 2 cut(s) 288, 1579
BspCNI CTCAG 5 cut(s) 402, 476, 1030, 1850, 2674
BspLI GGNNCC 3 cut(s) 1129, 2039, 2301
BspMAI CTGCAG 4 cut(s) 1991, 2088, 2575, 2659
BspPI GGATC 5 cut(s) 591, 1176, 1225, 1658, 2349
BspTI CTTAAG 2 cut(s) 659, 734
BsrBI CCGCTC 2 cut(s) 60, 2339
BsrDI GCAATG 2 cut(s) 167, 2438
BsrI ACTGG 7 cut(s) 127, 289, 788, 1072, 1471, 1732, 1828
BssECI CCNNGG 5 cut(s) 373, 520, 964, 1501, 1646
BssMI GATC 7 cut(s) 583, 1168, 1217, 1622, 1650, 2341, 2634
BssNAI GTATAC 1 cut(s) 215
BssT1I CCWWGG 3 cut(s) 520, 964, 1501
Bst1107I GTATAC 1 cut(s) 215
Bst2UI CCWGG 1 cut(s) 1647
Bst4CI ACNGT 1 cut(s) 2451
Bst6I CTCTTC 2 cut(s) 1753, 2580
BstAFI CTTAAG 2 cut(s) 659, 734
BstEII GGTNACC 1 cut(s) 467
BstF5I GGATG 9 cut(s) 146, 404, 858, 1002, 1525, 1692, 2319, 2512, 2540
BstKTI GATC 7 cut(s) 586, 1171, 1220, 1625, 1653, 2344, 2637
BstMAI GTCTC 1 cut(s) 1452
BstMBI GATC 7 cut(s) 583, 1168, 1217, 1622, 1650, 2341, 2634
BstMWI GCNNNNNNNGC 1 cut(s) 882
BstNI CCWGG 1 cut(s) 1647
BstNSI RCATGY 3 cut(s) 2216, 2407, 2602
BstPI GGTNACC 1 cut(s) 467
BstSCI CCNGG 2 cut(s) 288, 1645
BstSFI CTRYAG 4 cut(s) 1987, 2084, 2571, 2655
BstSLI GKGCMC 1 cut(s) 2212
BstV1I GCAGC 3 cut(s) 1973, 2641, 2669
BstV2I GAAGAC 3 cut(s) 955, 1191, 1307
BstX2I RGATCY 6 cut(s) 583, 1168, 1217, 1622, 1650, 2341
BstXI CCANNNNNNTGG 2 cut(s) 134, 1430
BstYI RGATCY 6 cut(s) 583, 1168, 1217, 1622, 1650, 2341
BstZ17I GTATAC 1 cut(s) 215
BsuI GTATCC 1 cut(s) 992
BsuRI GGCC 2 cut(s) 288, 1579
BtgZI GCGATG 1 cut(s) 1089
BtsCI GGATG 9 cut(s) 146, 404, 858, 1002, 1525, 1692, 2319, 2512, 2540
BtsI GCAGTG 1 cut(s) 2667
BtsIMutI CAGTG 4 cut(s) 1065, 1821, 2447, 2667
CaiI CAGNNNCTG 1 cut(s) 284
Cfr13I GGNCC 5 cut(s) 137, 287, 1128, 1523, 1577
Csp6I GTAC 5 cut(s) 282, 324, 1273, 1785, 2015
CviQI GTAC 5 cut(s) 282, 324, 1273, 1785, 2015
DpnI GATC 7 cut(s) 585, 1170, 1219, 1624, 1652, 2343, 2636
DpnII GATC 7 cut(s) 583, 1168, 1217, 1622, 1650, 2341, 2634
DraI TTTAAA 1 cut(s) 744
DraIII CACNNNGTG 2 cut(s) 635, 1232
Eam1104I CTCTTC 2 cut(s) 1753, 2580
EarI CTCTTC 2 cut(s) 1753, 2580
EciI GGCGGA 1 cut(s) 2262
Eco130I CCWWGG 3 cut(s) 520, 964, 1501
Eco32I GATATC 2 cut(s) 441, 1180
Eco47I GGWCC 3 cut(s) 137, 1128, 1523
Eco57I CTGAAG 3 cut(s) 161, 1418, 2477
Eco91I GGTNACC 1 cut(s) 467
EcoO65I GGTNACC 1 cut(s) 467
EcoRI GAATTC 3 cut(s) 1113, 1141, 2443
EcoRII CCWGG 1 cut(s) 1645
EcoRV GATATC 2 cut(s) 441, 1180
EcoT14I CCWWGG 3 cut(s) 520, 964, 1501
ErhI CCWWGG 3 cut(s) 520, 964, 1501
FblI GTMKAC 1 cut(s) 214
Fnu4HI GCNGC 3 cut(s) 1987, 2655, 2658
FokI GGATG 9 cut(s) 133, 391, 845, 989, 1532, 1699, 2326, 2519, 2527
Fsp4HI GCNGC 3 cut(s) 1987, 2655, 2658
GluI GCNGC 3 cut(s) 1987, 2655, 2658
GsuI CTGGAG 3 cut(s) 684, 1454, 2286
HaeIII GGCC 2 cut(s) 288, 1579
HapII CCGG 1 cut(s) 290
HincII GTYRAC 2 cut(s) 1022, 1659
HindII GTYRAC 2 cut(s) 1022, 1659
HpaII CCGG 1 cut(s) 290
HphI GGTGA 4 cut(s) 263, 1339, 1517, 1949
Hpy166II GTNNAC 9 cut(s) 140, 215, 295, 426, 1022, 1376, 1659, 2210, 2479
Hpy188I TCNGA 8 cut(s) 73, 392, 1443, 1532, 1861, 2064, 2496, 2584
Hpy8I GTNNAC 9 cut(s) 140, 215, 295, 426, 1022, 1376, 1659, 2210, 2479
HpyAV CCTTC 8 cut(s) 515, 766, 1089, 1240, 1352, 1799, 1898, 2312
HpyCH4III ACNGT 1 cut(s) 2451
HpyCH4IV ACGT 1 cut(s) 1872
HpyF10VI GCNNNNNNNGC 1 cut(s) 882
HpySE526I ACGT 1 cut(s) 1872
Kzo9I GATC 7 cut(s) 583, 1168, 1217, 1622, 1650, 2341, 2634
LmnI GCTCC 4 cut(s) 1907, 2037, 2305, 2336
Lsp1109I GCAGC 3 cut(s) 1973, 2641, 2669
LweI GCATC 3 cut(s) 1112, 1919, 2123
MaeII ACGT 1 cut(s) 1872
MaeIII GTNAC 6 cut(s) 467, 854, 1695, 1808, 1955, 2215
MalI GATC 7 cut(s) 585, 1170, 1219, 1624, 1652, 2343, 2636
MbiI CCGCTC 2 cut(s) 60, 2339
MboI GATC 7 cut(s) 583, 1168, 1217, 1622, 1650, 2341, 2634
MfeI CAATTG 5 cut(s) 838, 917, 1280, 2286, 2552
MflI RGATCY 6 cut(s) 583, 1168, 1217, 1622, 1650, 2341
MhlI GDGCHC 1 cut(s) 2212
MlyI GAGTC 3 cut(s) 691, 1563, 2257
MmeI TCCRAC 3 cut(s) 90, 959, 1538
MroXI GAANNNNTTC 2 cut(s) 1762, 1855
MslI CAYNNNNRTG 5 cut(s) 104, 151, 431, 1685, 2142
MspCI CTTAAG 2 cut(s) 659, 734
MspI CCGG 1 cut(s) 290
MspR9I CCNGG 2 cut(s) 290, 1647
MunI CAATTG 5 cut(s) 838, 917, 1280, 2286, 2552
Mva1269I GAATGC 1 cut(s) 99
MvaI CCWGG 1 cut(s) 1647
MwoI GCNNNNNNNGC 1 cut(s) 882
NciI CCSGG 1 cut(s) 290
NdeII GATC 7 cut(s) 583, 1168, 1217, 1622, 1650, 2341, 2634
NlaIV GGNNCC 3 cut(s) 1129, 2039, 2301
NmuCI GTSAC 1 cut(s) 1955
NspI RCATGY 3 cut(s) 2216, 2407, 2602
PciI ACATGT 2 cut(s) 2212, 2403
PcsI WCGNNNNNNNCGW 1 cut(s) 2481
PctI GAATGC 1 cut(s) 99
PdmI GAANNNNTTC 2 cut(s) 1762, 1855
PflMI CCANNNNNTGG 3 cut(s) 156, 1520, 2309
PkrI GCNGC 3 cut(s) 1988, 2656, 2659
PleI GAGTC 3 cut(s) 691, 1563, 2257
PpsI GAGTC 3 cut(s) 691, 1563, 2257
PscI ACATGT 2 cut(s) 2212, 2403
PshBI ATTAAT 1 cut(s) 381
Psp6I CCWGG 1 cut(s) 1645
PspEI GGTNACC 1 cut(s) 467
PspGI CCWGG 1 cut(s) 1645
PspN4I GGNNCC 3 cut(s) 1129, 2039, 2301
PspPI GGNCC 5 cut(s) 137, 287, 1128, 1523, 1577
PstI CTGCAG 4 cut(s) 1991, 2088, 2575, 2659
PstNI CAGNNNCTG 1 cut(s) 284
PsuI RGATCY 6 cut(s) 583, 1168, 1217, 1622, 1650, 2341
RsaI GTAC 5 cut(s) 283, 325, 1274, 1786, 2016
RsaNI GTAC 5 cut(s) 282, 324, 1273, 1785, 2015
RseI CAYNNNNRTG 5 cut(s) 104, 151, 431, 1685, 2142
SatI GCNGC 3 cut(s) 1987, 2655, 2658
Sau3AI GATC 7 cut(s) 583, 1168, 1217, 1622, 1650, 2341, 2634
Sau96I GGNCC 5 cut(s) 137, 287, 1128, 1523, 1577
SchI GAGTC 3 cut(s) 691, 1563, 2257
ScrFI CCNGG 2 cut(s) 290, 1647
SduI GDGCHC 1 cut(s) 2212
SfaNI GCATC 3 cut(s) 1112, 1919, 2123
SfcI CTRYAG 4 cut(s) 1987, 2084, 2571, 2655
SinI GGWCC 3 cut(s) 137, 1128, 1523
SmiMI CAYNNNNRTG 5 cut(s) 104, 151, 431, 1685, 2142
SmlI CTYRAG 4 cut(s) 55, 659, 734, 880
SmoI CTYRAG 4 cut(s) 55, 659, 734, 880
SsiI CCGC 5 cut(s) 60, 2009, 2247, 2339, 2462
SspI AATATT 3 cut(s) 226, 712, 1951
StyD4I CCNGG 2 cut(s) 288, 1645
StyI CCWWGG 3 cut(s) 520, 964, 1501
TaaI ACNGT 1 cut(s) 2451
TaiI ACGT 1 cut(s) 1875
TaqI TCGA 4 cut(s) 191, 695, 1157, 1335
TaqII GACCGA 1 cut(s) 612
TatI WGTACW 3 cut(s) 323, 1784, 2014
TscAI CASTG 4 cut(s) 1072, 1828, 2454, 2667
TseFI GTSAC 1 cut(s) 1955
TseI GCWGC 3 cut(s) 1986, 2654, 2657
Tsp45I GTSAC 1 cut(s) 1955
TspGWI ACGGA 2 cut(s) 596, 1532
TspRI CASTG 4 cut(s) 1072, 1828, 2454, 2667
Van91I CCANNNNNTGG 3 cut(s) 156, 1520, 2309
Vha464I CTTAAG 2 cut(s) 659, 734
VneI GTGCAC 1 cut(s) 2208
VpaK11BI GGWCC 3 cut(s) 137, 1128, 1523
VspI ATTAAT 1 cut(s) 381
XapI RAATTY 9 cut(s) 739, 1113, 1141, 1192, 1204, 1240, 1480, 1509, 2443
XbaI TCTAGA 1 cut(s) 586
XceI RCATGY 3 cut(s) 2216, 2407, 2602
XcmI CCANNNNNNNNNTGG 2 cut(s) 153, 1161
XmaJI CCTAGG 1 cut(s) 520
XmiI GTMKAC 1 cut(s) 214
XmnI GAANNNNTTC 2 cut(s) 1762, 1855
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.