Rw0G011250

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00489
Physical Location & Seq
Forward (+)
3978 .. 17069
13092 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G011250.1

Sequence Viewer

Length: 3375 bp
ATGGGAAACCCACAGATACTCGTACCATATGGACTAGTTGTGTTACTTCACTTCTCATGCTTCCTGAAGTTAACCTCATCTTCTTCCGCTTCCAACTTCACTGATCAAACTGCTCTTCTTGCCATTCAATCCAAACTCACATTTGACCCTACAGAAACTGTCTTGGGTGGCAATTGGACCACCAACACAAGCTTCTGTGATTGGATTGGGGTCTCTTGCAGTAAACGAAGGCAAAGAGTCACCGCCTTGGACGTGTCATATATGGGTCTCCAAGGCACGATTGCACCACATGTTGGCAACCTCTCCTTTCTGGTCTCATTGGATCTTCGAAACAACAGCTTCTCTGGCTTCCTGCCAAATGAAATCAGCCATTTACATCGCTTGAAGGTACTCATGCTGCATGCCAACCAGTTGGAGGGAAACATCCCTCGAACTTTGTATCGCTGCGAAAAGCTTGAAATGATTAGCCTTGCAATAAACAAGCTTAGCGGCCATATGCCTAAAGAGTTGGCTTTCTTACCCAGACTTGAGCAACTATTTCTTGGTAACAATAATTTCTCTGGTGGAATTCCACCAATTTTGGGTAACATTTCAACATTAGAAGTATTGAGTATGTCCTACAACGGCCTTACTGGTTCACTTCCTTCTTCCCTGTTTAACCTGTCTTCTTTAGGTACTTTTTCTGTATACCAAAATTTCCTTTCCGGAAGTTTTCATGATATTGATCTCTGCCGTTCTTGGCCTAGACTTCAATTCCTTTCTCTCACTCACAACAAATTCACTGGCCAGCTTCCTTACCTCAGCAATTGTACAGAGCTTGTCGGCTTATCTTTGTCATACAATATGTTTGTGGGAAAAATTCCAGCAGATGTTGGCTACTTAAAAAAACTTGAAGGACTTTATCTTGGTTTTAATAGCCTCACTGGTACCATACCTCCTACCATAGGTAACTTGTCCAACTTGAAATCCTTGGGTTTGAGGCAGAGTAACCTTAAGGGAAGCATTCCTCGTGATTTAGGGCGTCTTTCTAGATTAGTCGAACTTGTGGTTGGTCGGAATGGCCTAACCGGACCAGTGCCTCCAGAAATTTTCAATATCTCTTCTCTGCAAGTAATTGAAGCAAGAGATAATGCCCTTTCAGGAAAGTTTCCTTCCTCCTCTGCAGTTCGGCTTCCTAGCATTGAATTCATCTCTTTTTCTAACAATACAATTACTGGACATGTCCCGTCCTATTTTGCAAATTTTACAAAGCTCAAGTTGTTTCAGGTTAGATTAAACTTACTCTACGGACCAATTCCCAAGAATTTTGGTAGCTTAAATCACCTTGAAACCCTTCATCTCGGGGGAAATCAATTAACAGGAGATCCCGGAGTTCCTACACTTGATTTTCTTTCTTCTTTGTTTAATTGCCCTTCCCTGAAAACATTAGTTCTGACTCAGAATCCTTTAAATGGCACCATACCAAACTCCTTTGGAAATTCTTCTTCTTCTCTCCAGTCGTTTCTCATAGACAGGTGCCAAATTAAGGGCCACTTACCCAAGGGAATTGGTTCTTTGAAAAGCTTGACGCACCTTTTCTGCCCATACAACAATCTGAGTGGAAATATACCAGAGTCAATTGCAGGTTTGGAGAGGCTGCAAAGATTGTATCTTGGCAACAACAGCATAGAAGGCTCTATTCCAGACGAGCTTTGTCTTTTGAGGAACCTGGGAGAACTATCACTGCATACTAATAAAATCTCTGAATCAATCCCAAATTGCATAGGAAACCTCAGCCTCCTTCAGAGAGTTTTCCTAAGTTCCAATAGATTGACATCATCAGTACCGTTGGGTTTATGGAACCTTGAAAATCTCCTGTTCCTAGATCTGTCAAACAATTTTTTTCATGGGAACTTGCCTCCAAGCTTGGGAAAGTTGAATGCTATTGAAGGGATCGATTTATCTCGAAACCAAATTACCGGAAAAATTCCAAGCACCATAGGTGCTTTGCAAACCCTGAGCTCTCTAAATCTGTCACACAACTTGTTTACAGGTTCTGTACCGCAAACTTTTGGTGATCAGCTGAAAGGGTTGGAATTGTTGGACTTATCATTCAATAATCTTTCTGGTGCAATACCAAAGTCTCTTGAGAAACTCAAATTTCTCAACTACTTAAATCTCTCGTTCAACTACCTCTCCGGAGAGGTCCCTTCTGGAGGATGTTTCGTCAACTTCAATGCCCAGTCATTTTTGGAGAACAAGGCACTATGTGGGAGACGAGAGTTTGGACTCCCACCTTGCAAGACTCATAGGACTAAAAAATCAAAAGCGGCCACCCATTTGCTGGCCAAATATGTTCTTCCAGCCATTGCATCAACACTGATTCTCATAGCCCTCTGTTATATGATGACAAAGTATGGAACAAGAAAGAGAGGCAAGACTCCGAGTTCAGTTGAACAGTTAACAACAGTGGAGCATATTGTGATATCATATCAAGAACTCCGTTGGGCTACAAATGACTTTTGTGAAAGCAACTTACTTGGAGTGGGAAGTTTTGGCTCGGTGTACAAGGGGATACTGTCTAATGGGACAACCGTTGCTGTCAAAGTTCTTAAGCTGGAAATGGAGGGTGCTGTAAAAAGTTTTGATGCAGAATGCAAGGTGTGGAGAACAACCAGGCATAGGAATCTTGTAAAGGTCATAACTACATGTTCTAGCCCTGAAATAAGAGCTTTGGTGCTGCAGTACATGTCTAATGGCAGTCTTGAGAAGTGGTTATACTCTCACAACTACTGTCTCACTATTCTGCAAAGATTGAGCATGTTGATCGATATTGCATCTGCTTTGGAATATCTCCATCATGGTCATGCAGAAACTGTGGTGCACTGTGATGTGAAGCCTGGTAATGTCCTTCTTGATGAAGACATGGTTGCACACCTTGCAGACTTTGGTCTTGCAAAAATTTTAGCAAAAAACAAAGAGGAAACACAGACAAGAACCATCGGCACTCTGGGCTACGTAGCACCAGAGTATGGTTCAGAAGGAAGAGTGTCTGCCAGAGGTGATGTTTATAGCTTTGGAATCATGATGTTGGAGATTTTGACAAGAAAGAAACCCACAGAAGAAATGTTTGCTGGAGAGCCGAGTTTGAGGCAATGGATAAGTGCGTCACTTCCAGACAGGATGATGGAAGTTGTGGATAGTGGATTGCTGAGCATAGAAGATGGAAGAGATGTAGAGATGCTGCAAAGCATCCTCTTGTCCATAATGGAATTAGGCTTGGAGTGTAGTCAGGAATCGCCAGATGAGCGAGTTGACATTAAAAACGTGGTGATCAAGTTTAACAAAACCAAATTGGCACTTTCCCAGGACCGAAACCAGAATGCATTCCAGTAG

Protein Analysis

1124

Amino Acids

123.64

Weight (kDa)

8.66

Isoelectric Point (pI)

35.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 89 - 277 1.2e-09 Leucine-rich repeat region
LRR_8 PF13855 128 - 186 5.5e-06 Leucine rich repeat
LRR_14 PF23598 263 - 374 1.9e-06 Leucine-rich repeat region
LRR_14 PF23598 612 - 724 1.1e-07 Leucine-rich repeat region
LRR_8 PF13855 665 - 725 1.2e-07 Leucine rich repeat
Pkinase PF00069 837 - 1035 4.3e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 838 - 1104 2e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1613
Acc65I GGTACC 1 cut(s) 926
AccB1I GGYRCC 3 cut(s) 926, 1454, 1515
AccB7I CCANNNNNTGG 3 cut(s) 293, 2323, 3011
AccI GTMKAC 1 cut(s) 687
AccIII TCCGGA 2 cut(s) 704, 2177
AciI CCGC 5 cut(s) 87, 243, 489, 2042, 2309
AclWI GGATC 3 cut(s) 330, 1358, 1940
AcoI YGGCCR 4 cut(s) 490, 784, 2310, 2325
AcuI CTGAAG 2 cut(s) 86, 1766
AcyI GRCGYC 1 cut(s) 1021
AdeI CACNNNGTG 1 cut(s) 2249
AfaI GTAC 9 cut(s) 24, 390, 676, 811, 928, 1824, 2040, 2546, 2726
AflII CTTAAG 2 cut(s) 992, 2591
AflIII ACRYGT 5 cut(s) 252, 289, 1219, 2687, 2727
AhlI ACTAGT 1 cut(s) 34
AjiI CACGTC 1 cut(s) 253
AjnI CCWGG 4 cut(s) 1707, 2654, 2878, 3345
AjuI GAANNNNNNNTTGG 4 cut(s) 176, 208, 1032, 1064
Alw21I GWGCWC 2 cut(s) 2003, 2865
Alw26I GTCTC 6 cut(s) 217, 272, 319, 2127, 2248, 2780
Alw44I GTGCAC 1 cut(s) 2861
AlwI GGATC 3 cut(s) 330, 1358, 1940
AlwNI CAGNNNCTG 3 cut(s) 158, 2036, 2855
Ama87I CYCGRG 1 cut(s) 1340
Aor13HI TCCGGA 2 cut(s) 704, 2177
AoxI GGCC 8 cut(s) 490, 625, 740, 784, 1060, 1528, 2310, 2325
ApaLI GTGCAC 1 cut(s) 2861
ApeKI GCWGC 5 cut(s) 397, 444, 1636, 2719, 3223
Asp700I GAANNNNTTC 4 cut(s) 1332, 1480, 1549, 3365
Asp718I GGTACC 1 cut(s) 926
AspS9I GGNCC 6 cut(s) 177, 1070, 1289, 1528, 2185, 3349
AsuC2I CCSGG 1 cut(s) 1368
AsuHPI GGTGA 5 cut(s) 232, 1313, 2066, 3053, 3322
AsuII TTCGAA 1 cut(s) 328
AvaI CYCGRG 1 cut(s) 1340
AvaII GGWCC 5 cut(s) 177, 1070, 1289, 2185, 3349
BaeGI GKGCMC 1 cut(s) 2865
BalI TGGCCA 2 cut(s) 786, 2327
BanI GGYRCC 3 cut(s) 926, 1454, 1515
BanII GRGCYC 1 cut(s) 2003
BarI GAAGNNNNNNTAC 2 cut(s) 2741, 2773
BauI CACGAG 1 cut(s) 1008
BbsI GAAGAC 2 cut(s) 657, 2907
Bbv12I GWGCWC 2 cut(s) 2003, 2865
BbvCI CCTCAGC 2 cut(s) 800, 1772
BbvI GCAGC 5 cut(s) 384, 431, 1623, 2706, 3210
BccI CCATC 4 cut(s) 2844, 2987, 3160, 3197
BceAI ACGGC 2 cut(s) 640, 717
BcgI CGANNNNNNTGC 2 cut(s) 2788, 2822
BciT130I CCWGG 4 cut(s) 1709, 2656, 2880, 3347
BciVI GTATCC 1 cut(s) 2547
BclI TGATCA 3 cut(s) 103, 2056, 3312
BcnI CCSGG 1 cut(s) 1368
BcoDI GTCTC 6 cut(s) 217, 272, 319, 2127, 2248, 2780
BcuI ACTAGT 1 cut(s) 34
BfaI CTAG 6 cut(s) 35, 744, 1029, 1176, 1862, 2694
BfmI CTRYAG 3 cut(s) 150, 1161, 2720
BfrI CTTAAG 2 cut(s) 992, 2591
BfuAI ACCTGC 1 cut(s) 1613
BfuI GTATCC 1 cut(s) 2547
BglII AGATCT 1 cut(s) 1864
BisI GCNGC 7 cut(s) 398, 445, 490, 1637, 2310, 2720, 3224
BlpI GCTNAGC 2 cut(s) 485, 3191
BlsI GCNGC 7 cut(s) 399, 446, 491, 1638, 2311, 2721, 3225
Bme1390I CCNGG 5 cut(s) 1368, 1709, 2656, 2880, 3347
Bme18I GGWCC 5 cut(s) 177, 1070, 1289, 2185, 3349
BmeT110I CYCGRG 1 cut(s) 1340
BmgBI CACGTC 1 cut(s) 253
BmgT120I GGNCC 6 cut(s) 177, 1070, 1289, 1528, 2185, 3349
BmiI GGNNCC 6 cut(s) 928, 1456, 1517, 1706, 1841, 2187
BmrFI CCNGG 5 cut(s) 1368, 1709, 2656, 2880, 3347
BmrI ACTGGG 1 cut(s) 2215
BmsI GCATC 5 cut(s) 2360, 2617, 2825, 3210, 3240
BmuI ACTGGG 1 cut(s) 2215
BoxI GACNNNNGTC 1 cut(s) 2928
BpiI GAAGAC 2 cut(s) 657, 2907
BpmI CTGGAG 4 cut(s) 1065, 1478, 2214, 3135
Bpu10I CCTNAGC 3 cut(s) 800, 1772, 1997
Bpu1102I GCTNAGC 2 cut(s) 485, 3191
Bpu14I TTCGAA 1 cut(s) 328
BpuEI CTTGAG 4 cut(s) 548, 1238, 2147, 2765
BpuMI CCSGG 1 cut(s) 1368
Bsa29I ATCGAT 2 cut(s) 1935, 2808
BsaAI YACGTR 1 cut(s) 2998
BsaBI GATNNNNATC 2 cut(s) 723, 1813
BsaHI GRCGYC 1 cut(s) 1021
BsaI GGTCTC 3 cut(s) 217, 272, 319
BsaJI CCNNGG 6 cut(s) 246, 271, 969, 1539, 1708, 3345
BsaWI WCCGGW 4 cut(s) 704, 1067, 1958, 2177
BsaXI ACNNNNNCTCC 4 cut(s) 919, 949, 2159, 2189
Bse1I ACTGG 9 cut(s) 409, 637, 787, 928, 1073, 1219, 1495, 2221, 3370
Bse3DI GCAATG 2 cut(s) 2346, 3140
Bse8I GATNNNNATC 2 cut(s) 723, 1813
BseAI TCCGGA 2 cut(s) 704, 2177
BseBI CCWGG 4 cut(s) 1709, 2656, 2880, 3347
BseCI ATCGAT 2 cut(s) 1935, 2808
BseDI CCNNGG 6 cut(s) 246, 271, 969, 1539, 1708, 3345
BseGI GGATG 4 cut(s) 423, 2204, 3168, 3231
BseJI GATNNNNATC 2 cut(s) 723, 1813
BseMI GCAATG 2 cut(s) 2346, 3140
BseMII CTCAG 6 cut(s) 814, 1451, 1586, 1786, 1988, 3182
BseNI ACTGG 9 cut(s) 409, 637, 787, 928, 1073, 1219, 1495, 2221, 3370
BseRI GAGGAG 1 cut(s) 1147
BseSI GKGCMC 1 cut(s) 2865
BseXI GCAGC 5 cut(s) 384, 431, 1623, 2706, 3210
BshFI GGCC 8 cut(s) 492, 627, 742, 786, 1062, 1530, 2312, 2327
BshNI GGYRCC 3 cut(s) 926, 1454, 1515
BshVI ATCGAT 2 cut(s) 1935, 2808
BsiHKAI GWGCWC 2 cut(s) 2003, 2865
BsiHKCI CYCGRG 1 cut(s) 1340
BsiSI CCGG 5 cut(s) 705, 1068, 1368, 1959, 2178
BslFI GGGAC 3 cut(s) 1208, 2171, 2581
BsmAI GTCTC 6 cut(s) 217, 272, 319, 2127, 2248, 2780
BsmBI CGTCTC 1 cut(s) 2248
BsmFI GGGAC 3 cut(s) 1208, 2171, 2581
BsmI GAATGC 5 cut(s) 1002, 1924, 2639, 3365, 3367
BsnI GGCC 8 cut(s) 492, 627, 742, 786, 1062, 1530, 2312, 2327
Bso31I GGTCTC 3 cut(s) 217, 272, 319
BsoBI CYCGRG 1 cut(s) 1340
Bsp119I TTCGAA 1 cut(s) 328
Bsp1286I GDGCHC 2 cut(s) 2003, 2865
Bsp13I TCCGGA 2 cut(s) 704, 2177
Bsp1407I TGTACA 2 cut(s) 809, 2544
Bsp143I GATC 9 cut(s) 103, 322, 724, 1363, 1864, 1932, 2056, 2805, 3312
Bsp1720I GCTNAGC 2 cut(s) 485, 3191
BspACI CCGC 5 cut(s) 87, 243, 489, 2042, 2309
BspANI GGCC 8 cut(s) 492, 627, 742, 786, 1062, 1530, 2312, 2327
BspCNI CTCAG 6 cut(s) 813, 1450, 1587, 1785, 1989, 3183
BspDI ATCGAT 2 cut(s) 1935, 2808
BspEI TCCGGA 2 cut(s) 704, 2177
BspHI TCATGA 2 cut(s) 715, 3063
BspLI GGNNCC 6 cut(s) 928, 1456, 1517, 1706, 1841, 2187
BspMAI CTGCAG 2 cut(s) 1165, 2724
BspMI ACCTGC 1 cut(s) 1613
BspPI GGATC 3 cut(s) 330, 1358, 1940
BspQI GCTCTTC 1 cut(s) 120
BspT104I TTCGAA 1 cut(s) 328
BspT107I GGYRCC 3 cut(s) 926, 1454, 1515
BspTI CTTAAG 2 cut(s) 992, 2591
BspTNI GGTCTC 3 cut(s) 217, 272, 319
BsrDI GCAATG 2 cut(s) 2346, 3140
BsrGI TGTACA 2 cut(s) 809, 2544
BsrI ACTGG 9 cut(s) 409, 637, 787, 928, 1073, 1219, 1495, 2221, 3370
BssECI CCNNGG 6 cut(s) 246, 271, 969, 1539, 1708, 3345
BssMI GATC 9 cut(s) 103, 322, 724, 1363, 1864, 1932, 2056, 2805, 3312
BssNAI GTATAC 1 cut(s) 688
BssNI GRCGYC 1 cut(s) 1021
BssSI CACGAG 1 cut(s) 1008
BssT1I CCWWGG 4 cut(s) 246, 271, 969, 1539
Bst1107I GTATAC 1 cut(s) 688
Bst2BI CACGAG 1 cut(s) 1008
Bst2UI CCWGG 4 cut(s) 1709, 2656, 2880, 3347
Bst4CI ACNGT 9 cut(s) 160, 1827, 2439, 2449, 2559, 2575, 2774, 2857, 2867
Bst6I CTCTTC 4 cut(s) 120, 1105, 3019, 3202
BstACI GRCGYC 1 cut(s) 1021
BstAFI CTTAAG 2 cut(s) 992, 2591
BstAPI GCANNNNNTGC 1 cut(s) 2918
BstAUI TGTACA 2 cut(s) 809, 2544
BstBAI YACGTR 1 cut(s) 2998
BstBI TTCGAA 1 cut(s) 328
BstC8I GCNNGC 3 cut(s) 402, 788, 2325
BstDEI CTNAG 8 cut(s) 485, 800, 1437, 1595, 1772, 1796, 1997, 3191
BstENI CCTNNNNNAGG 2 cut(s) 942, 2193
BstF5I GGATG 4 cut(s) 423, 2204, 3168, 3231
BstKTI GATC 9 cut(s) 106, 325, 727, 1366, 1867, 1935, 2059, 2808, 3315
BstMAI GTCTC 6 cut(s) 217, 272, 319, 2127, 2248, 2780
BstMBI GATC 9 cut(s) 103, 322, 724, 1363, 1864, 1932, 2056, 2805, 3312
BstMWI GCNNNNNNNGC 7 cut(s) 119, 345, 1662, 1671, 2918, 2991, 3286
BstNI CCWGG 4 cut(s) 1709, 2656, 2880, 3347
BstNSI RCATGY 6 cut(s) 293, 404, 1223, 2691, 2731, 2803
BstPAI GACNNNNGTC 1 cut(s) 2928
BstSCI CCNGG 5 cut(s) 1366, 1707, 2654, 2878, 3345
BstSFI CTRYAG 3 cut(s) 150, 1161, 2720
BstSLI GKGCMC 1 cut(s) 2865
BstSNI TACGTA 1 cut(s) 2998
BstV1I GCAGC 5 cut(s) 384, 431, 1623, 2706, 3210
BstV2I GAAGAC 2 cut(s) 657, 2907
BstX2I RGATCY 3 cut(s) 322, 1363, 1864
BstXI CCANNNNNNTGG 1 cut(s) 412
BstYI RGATCY 3 cut(s) 322, 1363, 1864
BstZ17I GTATAC 1 cut(s) 688
Bsu15I ATCGAT 2 cut(s) 1935, 2808
BsuI GTATCC 1 cut(s) 2547
BsuRI GGCC 8 cut(s) 492, 627, 742, 786, 1062, 1530, 2312, 2327
BsuTUI ATCGAT 2 cut(s) 1935, 2808
BtgZI GCGATG 1 cut(s) 362
BtrI CACGTC 1 cut(s) 253
BtsCI GGATG 4 cut(s) 423, 2204, 3168, 3231
BtsI GCAGTG 1 cut(s) 1721
BtsIMutI CAGTG 8 cut(s) 99, 780, 921, 1080, 1721, 2357, 2454, 2863
BveI ACCTGC 1 cut(s) 1613
Cac8I GCNNGC 3 cut(s) 402, 788, 2325
CaiI CAGNNNCTG 3 cut(s) 158, 2036, 2855
CciI TCATGA 2 cut(s) 715, 3063
Cfr13I GGNCC 6 cut(s) 177, 1070, 1289, 1528, 2185, 3349
ClaI ATCGAT 2 cut(s) 1935, 2808
CseI GACGC 3 cut(s) 1010, 1576, 3135
Csp6I GTAC 9 cut(s) 23, 389, 675, 810, 927, 1823, 2039, 2545, 2725
CspCI CAANNNNNGTGG 4 cut(s) 561, 596, 1579, 1614
CviQI GTAC 9 cut(s) 23, 389, 675, 810, 927, 1823, 2039, 2545, 2725
DdeI CTNAG 8 cut(s) 485, 800, 1437, 1595, 1772, 1796, 1997, 3191
DpnI GATC 9 cut(s) 105, 324, 726, 1365, 1866, 1934, 2058, 2807, 3314
DpnII GATC 9 cut(s) 103, 322, 724, 1363, 1864, 1932, 2056, 2805, 3312
DraI TTTAAA 1 cut(s) 1449
DraIII CACNNNGTG 1 cut(s) 2249
EaeI YGGCCR 4 cut(s) 490, 784, 2310, 2325
Eam1104I CTCTTC 4 cut(s) 120, 1105, 3019, 3202
EarI CTCTTC 4 cut(s) 120, 1105, 3019, 3202
Ecl136II GAGCTC 1 cut(s) 2001
Eco105I TACGTA 1 cut(s) 2998
Eco130I CCWWGG 4 cut(s) 246, 271, 969, 1539
Eco24I GRGCYC 1 cut(s) 2003
Eco31I GGTCTC 3 cut(s) 217, 272, 319
Eco32I GATATC 1 cut(s) 2466
Eco47I GGWCC 5 cut(s) 177, 1070, 1289, 2185, 3349
Eco53kI GAGCTC 1 cut(s) 2001
Eco57I CTGAAG 2 cut(s) 86, 1766
Eco88I CYCGRG 1 cut(s) 1340
EcoICRI GAGCTC 1 cut(s) 2001
EcoNI CCTNNNNNAGG 2 cut(s) 942, 2193
EcoO109I RGGNCCY 1 cut(s) 2185
EcoRI GAATTC 2 cut(s) 567, 1184
EcoRII CCWGG 4 cut(s) 1707, 2654, 2878, 3345
EcoRV GATATC 1 cut(s) 2466
EcoT14I CCWWGG 4 cut(s) 246, 271, 969, 1539
EcoT22I ATGCAT 1 cut(s) 3367
EcoT38I GRGCYC 1 cut(s) 2003
ErhI CCWWGG 4 cut(s) 246, 271, 969, 1539
Esp3I CGTCTC 1 cut(s) 2248
FalI AAGNNNNNCTT 2 cut(s) 1517, 1549
FaqI GGGAC 3 cut(s) 1208, 2171, 2581
FauNDI CATATG 2 cut(s) 28, 495
FbaI TGATCA 3 cut(s) 103, 2056, 3312
FblI GTMKAC 1 cut(s) 687
Fnu4HI GCNGC 7 cut(s) 398, 445, 490, 1637, 2310, 2720, 3224
FokI GGATG 4 cut(s) 410, 2211, 3175, 3218
FriOI GRGCYC 1 cut(s) 2003
Fsp4HI GCNGC 7 cut(s) 398, 445, 490, 1637, 2310, 2720, 3224
FspBI CTAG 6 cut(s) 35, 744, 1029, 1176, 1862, 2694
GluI GCNGC 7 cut(s) 398, 445, 490, 1637, 2310, 2720, 3224
GsuI CTGGAG 4 cut(s) 1065, 1478, 2214, 3135
HaeIII GGCC 8 cut(s) 492, 627, 742, 786, 1062, 1530, 2312, 2327
HapII CCGG 5 cut(s) 705, 1068, 1368, 1959, 2178
HgaI GACGC 3 cut(s) 1010, 1576, 3135
Hin1I GRCGYC 1 cut(s) 1021
HincII GTYRAC 4 cut(s) 72, 2209, 2442, 3295
HindII GTYRAC 4 cut(s) 72, 2209, 2442, 3295
HindIII AAGCTT 5 cut(s) 190, 452, 482, 1561, 1903
HpaI GTTAAC 2 cut(s) 72, 2442
HpaII CCGG 5 cut(s) 705, 1068, 1368, 1959, 2178
HphI GGTGA 5 cut(s) 232, 1313, 2066, 3053, 3322
Hpy188I TCNGA 8 cut(s) 1056, 1434, 1440, 1596, 1744, 1785, 2424, 3019
HpyCH4III ACNGT 9 cut(s) 160, 1827, 2439, 2449, 2559, 2575, 2774, 2857, 2867
HpyCH4IV ACGT 3 cut(s) 252, 2997, 3306
HpyF10VI GCNNNNNNNGC 7 cut(s) 119, 345, 1662, 1671, 2918, 2991, 3286
HpyF3I CTNAG 8 cut(s) 485, 800, 1437, 1595, 1772, 1796, 1997, 3191
HpySE526I ACGT 3 cut(s) 252, 2997, 3306
Hsp92I GRCGYC 1 cut(s) 1021
Kpn2I TCCGGA 2 cut(s) 704, 2177
KpnI GGTACC 1 cut(s) 930
Ksp22I TGATCA 3 cut(s) 103, 2056, 3312
KspAI GTTAAC 2 cut(s) 72, 2442
Kzo9I GATC 9 cut(s) 103, 322, 724, 1363, 1864, 1932, 2056, 2805, 3312
LguI GCTCTTC 1 cut(s) 120
LmnI GCTCC 1 cut(s) 2452
Lsp1109I GCAGC 5 cut(s) 384, 431, 1623, 2706, 3210
LweI GCATC 5 cut(s) 2360, 2617, 2825, 3210, 3240
MaeI CTAG 6 cut(s) 35, 744, 1029, 1176, 1862, 2694
MaeII ACGT 3 cut(s) 252, 2997, 3306
MaeIII GTNAC 8 cut(s) 42, 238, 545, 584, 947, 986, 2013, 3147
MalI GATC 9 cut(s) 105, 324, 726, 1365, 1866, 1934, 2058, 2807, 3314
MboI GATC 9 cut(s) 103, 322, 724, 1363, 1864, 1932, 2056, 2805, 3312
MfeI CAATTG 3 cut(s) 172, 805, 1617
MflI RGATCY 3 cut(s) 322, 1363, 1864
MhlI GDGCHC 2 cut(s) 2003, 2865
MlsI TGGCCA 2 cut(s) 786, 2327
MluNI TGGCCA 2 cut(s) 786, 2327
MlyI GAGTC 6 cut(s) 246, 1429, 1622, 2262, 2278, 2413
MmeI TCCRAC 7 cut(s) 117, 393, 981, 1034, 2052, 2061, 3051
Mox20I TGGCCA 2 cut(s) 786, 2327
Mph1103I ATGCAT 1 cut(s) 3367
MroI TCCGGA 2 cut(s) 704, 2177
MroXI GAANNNNTTC 4 cut(s) 1332, 1480, 1549, 3365
MscI TGGCCA 2 cut(s) 786, 2327
MslI CAYNNNNRTG 2 cut(s) 2844, 2868
Msp20I TGGCCA 2 cut(s) 786, 2327
MspA1I CMGCKG 1 cut(s) 2062
MspCI CTTAAG 2 cut(s) 992, 2591
MspI CCGG 5 cut(s) 705, 1068, 1368, 1959, 2178
MspR9I CCNGG 5 cut(s) 1368, 1709, 2656, 2880, 3347
MunI CAATTG 3 cut(s) 172, 805, 1617
Mva1269I GAATGC 5 cut(s) 1002, 1924, 2639, 3365, 3367
MvaI CCWGG 4 cut(s) 1709, 2656, 2880, 3347
MwoI GCNNNNNNNGC 7 cut(s) 119, 345, 1662, 1671, 2918, 2991, 3286
NciI CCSGG 1 cut(s) 1368
NdeI CATATG 2 cut(s) 28, 495
NdeII GATC 9 cut(s) 103, 322, 724, 1363, 1864, 1932, 2056, 2805, 3312
NlaIV GGNNCC 6 cut(s) 928, 1456, 1517, 1706, 1841, 2187
NmeAIII GCCGAG 1 cut(s) 3147
NmuCI GTSAC 3 cut(s) 238, 2013, 3147
NsiI ATGCAT 1 cut(s) 3367
NspI RCATGY 6 cut(s) 293, 404, 1223, 2691, 2731, 2803
NspV TTCGAA 1 cut(s) 328
PaeI GCATGC 1 cut(s) 404
PagI TCATGA 2 cut(s) 715, 3063
PciI ACATGT 4 cut(s) 289, 1219, 2687, 2727
PciSI GCTCTTC 1 cut(s) 120
PctI GAATGC 5 cut(s) 1002, 1924, 2639, 3365, 3367
PdmI GAANNNNTTC 4 cut(s) 1332, 1480, 1549, 3365
PfeI GAWTC 6 cut(s) 1441, 1745, 2362, 2665, 3060, 3275
PflMI CCANNNNNTGG 3 cut(s) 293, 2323, 3011
PfoI TCCNGGA 1 cut(s) 1366
PkrI GCNGC 7 cut(s) 399, 446, 491, 1638, 2311, 2721, 3225
PleI GAGTC 6 cut(s) 245, 1429, 1621, 2262, 2278, 2413
PpsI GAGTC 6 cut(s) 245, 1429, 1621, 2262, 2278, 2413
Ppu21I YACGTR 1 cut(s) 2998
PpuMI RGGWCCY 1 cut(s) 2185
PscI ACATGT 4 cut(s) 289, 1219, 2687, 2727
PshAI GACNNNNGTC 1 cut(s) 2928
Psp124BI GAGCTC 1 cut(s) 2003
Psp5II RGGWCCY 1 cut(s) 2185
Psp6I CCWGG 4 cut(s) 1707, 2654, 2878, 3345
PspGI CCWGG 4 cut(s) 1707, 2654, 2878, 3345
PspN4I GGNNCC 6 cut(s) 928, 1456, 1517, 1706, 1841, 2187
PspPI GGNCC 6 cut(s) 177, 1070, 1289, 1528, 2185, 3349
PspPPI RGGWCCY 1 cut(s) 2185
PstI CTGCAG 2 cut(s) 1165, 2724
PstNI CAGNNNCTG 3 cut(s) 158, 2036, 2855
PsuI RGATCY 3 cut(s) 322, 1363, 1864
PvuII CAGCTG 1 cut(s) 2062
RsaI GTAC 9 cut(s) 24, 390, 676, 811, 928, 1824, 2040, 2546, 2726
RsaNI GTAC 9 cut(s) 23, 389, 675, 810, 927, 1823, 2039, 2545, 2725
RseI CAYNNNNRTG 2 cut(s) 2844, 2868
SacI GAGCTC 1 cut(s) 2003
SapI GCTCTTC 1 cut(s) 120
SatI GCNGC 7 cut(s) 398, 445, 490, 1637, 2310, 2720, 3224
Sau3AI GATC 9 cut(s) 103, 322, 724, 1363, 1864, 1932, 2056, 2805, 3312
Sau96I GGNCC 6 cut(s) 177, 1070, 1289, 1528, 2185, 3349
SchI GAGTC 6 cut(s) 246, 1429, 1622, 2262, 2278, 2413
ScrFI CCNGG 5 cut(s) 1368, 1709, 2656, 2880, 3347
SduI GDGCHC 2 cut(s) 2003, 2865
SfaNI GCATC 5 cut(s) 2360, 2617, 2825, 3210, 3240
SfcI CTRYAG 3 cut(s) 150, 1161, 2720
SfuI TTCGAA 1 cut(s) 328
SinI GGWCC 5 cut(s) 177, 1070, 1289, 2185, 3349
SmiMI CAYNNNNRTG 2 cut(s) 2844, 2868
SmlI CTYRAG 6 cut(s) 527, 992, 1253, 2126, 2591, 2744
SmoI CTYRAG 6 cut(s) 527, 992, 1253, 2126, 2591, 2744
SnaBI TACGTA 1 cut(s) 2998
SpeI ACTAGT 1 cut(s) 34
SphI GCATGC 1 cut(s) 404
SsiI CCGC 5 cut(s) 87, 243, 489, 2042, 2309
SspMI CTAG 6 cut(s) 35, 744, 1029, 1176, 1862, 2694
SstI GAGCTC 1 cut(s) 2003
StyD4I CCNGG 5 cut(s) 1366, 1707, 2654, 2878, 3345
StyI CCWWGG 4 cut(s) 246, 271, 969, 1539
TaaI ACNGT 9 cut(s) 160, 1827, 2439, 2449, 2559, 2575, 2774, 2857, 2867
TaiI ACGT 3 cut(s) 255, 3000, 3309
TaqI TCGA 6 cut(s) 328, 430, 1038, 1935, 1945, 2808
TaqII GACCGA 1 cut(s) 3366
TatI WGTACW 3 cut(s) 809, 2544, 2724
TauI GCSGC 2 cut(s) 492, 2312
TfiI GAWTC 6 cut(s) 1441, 1745, 2362, 2665, 3060, 3275
TscAI CASTG 8 cut(s) 106, 787, 928, 1080, 1728, 2364, 2454, 2870
TseFI GTSAC 3 cut(s) 238, 2013, 3147
TseI GCWGC 5 cut(s) 397, 444, 1636, 2719, 3223
Tsp45I GTSAC 3 cut(s) 238, 2013, 3147
TspDTI ATGAA 6 cut(s) 375, 704, 1177, 1325, 1874, 2913
TspGWI ACGGA 2 cut(s) 1302, 2471
TspRI CASTG 8 cut(s) 106, 787, 928, 1080, 1728, 2364, 2454, 2870
Van91I CCANNNNNTGG 3 cut(s) 293, 2323, 3011
Vha464I CTTAAG 2 cut(s) 992, 2591
VneI GTGCAC 1 cut(s) 2861
VpaK11BI GGWCC 5 cut(s) 177, 1070, 1289, 2185, 3349
XagI CCTNNNNNAGG 2 cut(s) 942, 2193
XbaI TCTAGA 1 cut(s) 1028
XceI RCATGY 6 cut(s) 293, 404, 1223, 2691, 2731, 2803
XcmI CCANNNNNNNNNTGG 2 cut(s) 2320, 2986
XmiI GTMKAC 1 cut(s) 687
XmnI GAANNNNTTC 4 cut(s) 1332, 1480, 1549, 3365
XspI CTAG 6 cut(s) 35, 744, 1029, 1176, 1862, 2694
Zsp2I ATGCAT 1 cut(s) 3367
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.