RLG00000009021

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
45220022 .. 45223785
3764 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009021

Sequence Viewer

Length: 3333 bp
ATGGGAAACCCACGAATGCTAATCCCATTTGGACTAGTAGTGTTACTTCACTACTCATTCTTCCTTCACCCGGCCACCACCTCCTCCTCCAACTTCACCGACCAATCTGCTCTCCTTGCCATTCAATCCAAACTCACATTTGATCCTACCAAAACTGTCTTGGGTGGTAATTGGGGTACCAACACAAGCTTCTGTGATTGGATTGGGGTCTCATGCAGTAAACGAAGGCAAAGAGTCACAGCCTTGGACTTGTCATCTATGGGTCTTGAAGGCACCATTGCACCTCATGTTGGCAACCTCTCCTTTCTGGTCATATTGGTTCTTCAAAACAACAGCTTCTCTGGGATTGTGCCAAATGAAATCAGCCATTTACACCGCTTGAGGGTACTTGTACTGGAAGCGAACCGGTTGGAAGGGCACATCCCTCCAACTTTATATCATTGCCAAAAGCTCAAAATCATTGCCCTTGCAGAAAACAAGCTTACCGGTCGTATACCTGAAGAGTTGGGTTTCTTACCCAAACTTCAGAAATTATATCTCGGTTTAAACAATCTCACGGCTGGCAAAATTCCAGCATCTTTGGGGAACGTTTCAACATTACAAGAATTGAGTGTGGCAAAAAGTGGCCTCACAGGTTCACTCCCTTCCACTCTACTTAATCTATCTTCTCTAGTTGTTATTGCACTATATACAAATAACATTTCAGGAGTTCTTCCTGAGGATCTTTGCCATTACTGGCCTAATATTCAACACATTGCTTTATCTGAAAACAAGCTTGGCGGCCAGCTCTCTTCGAGATTTAATCAATGCAGTAAGATTGAGGTGTTATCTCTGTCATACAATAGGTTTGTCGGAACTATTCCAAAAGACCTTGCAAGTTTACAGCATCTTGAATTGCTCTACCTCGGTGGTAATGGCTTAACCGGTACTGTACCGCCGGTCCTAGGTAACTTGTCCAACTTGCAAAAGTTTTCTGTAGGACGTAATAACGTCAAAGGAAGTATTCCCAGAGAGTTGGGCCTTCTTTCTAATTTACTTTACCTTTCATTAGCTAAGAATAGCCTAACAGGTGCAATACCTCCAGAAATTTTCAACATCACCTCCTTACAAACTTTGTCAGTACGTAATAATTCCCTTTCTGGGGCAATTCCTTCGTTTTCTGGAGTAGTTCTTCCTAACCTCAAATTCCTATACTTCCAAAGCAATAAGATTACTGGTCTTATCCCATCCTTTTTTTCAAACCTTACTAAGCTGAATGACTTGGGACTCAGTACCAATTTACTCTATGGACCAATTCCCATGGATCTTGGTAGCCTAAAACACCTCCAGTTCCTTGATTTGGCAAGAAATCAGTTGACTGGAGAACCTGGAGTTCCTGAACTTAAATTCCTTTCCTCATTATTCAATTCCACTTCGCTGCGAGAGTTGGTTCTGACTGAAAATCCTCTAAATGGCATCATACCCAATTCCTTTGGAAATTTTTCTTCCCTTCAGCACATTTCAGCAATTTCGTGCCAGATAAAGGGTCACATTCCCACAAAAATTCATTCCTTGAAAAGTTTAATCTACCTTAAATTTGTGGACAACAATATAAGTGGAAAAATACCACCACAGATTGGAGGACTGGAGAGGTTACAAAGGTTGTATCTGAGCTTCAACAGAATTGAAGGATCCATTCCATATGAGATCTGTCATCTGCAGAACCTAGGAGAACTATCACTAGAGAATAACAAAATCTCTGGATTGATCCCAAATTGCATTGGAAACCTCAGCCGCACCCTTCAAATATTTCTCCTAAATTCCAACCAAATGGCATCCTTGATACCAATGAATTTATGGAACTTGGAAAATCTCTTGGTGTTAAATTTGTCATCCAATTCTTTCAGTGGAGACATACCTACCACCTTGACAAAGTCGATTTCCATTGAAGTGATTGATTTATCTCATAACCAAATTACTGGTAATATTTCAAGCATCATAGCAGCATTCCAAAGTCTAGCTTACCTTGATTTGTCAAAGAACTGGTTTATAGGATCCATCCCACCGAGCTGTGGTGATCTGAAAGGGTTAGAGTATCTGGACCTATCATACAATAACCTGTCTGGTGCAATACCAAAGTCTCTTGAAACTCTCAAATTTCTCGAGTATTTGAATCTCTCTTTCAATGATCTCTTTGGAGAGATTCCTTCTGGTGGACCTTTTGTAAACTTTAGTTCCCGATCATTTTTGGAGAATAAAGCACTTTGTGGGAGACCAAAGTATGGAGTTCCACCTTGTATGACTCAGAAATCAAAGACGACACATCCTGTGCTCACATATGTTCTTCCTAGCATTGCATCGACAGTGATTCTGATAGCCCTCATTTATATGATCACATGGTATAGAAAAAGAAAGAGAGGCAAGAGTACAACAGTTGAACAGCTAACAACAGTGGAGCATAGTAGGATATCATATCAAGAACTCCGTCGCGCTACAAATGACTTTTGTGAAAGCAACTTTCTTGGAGGGGGAAGTTTTGGCTCGGTGTACAAGGGGATACTGTCTAATGGGACTACTATTGCTGTCAAAATTCTTAAGCTGGAAATGGAGGGTGCTGTAAAAAGTTTTGATGCAGAATGCAAGGTGTGGCGAACAATCCGTCATAGGAATCTTGTAAAGATTATAACTACATGTTCCAGCCCTGAGGTCAGAGCTTTGGTGCTGCAGTACATGTCTAATGGCAGTCTTGAGAAGTGGTTATACTCTCACAACTACTGTCTCAGTATTCTGCAAAGAGTGAGCATGTTGATCGATATTGCATCTGCTTTGGAATATCTCCATCATGGTCAAGCAGAAGCAGTGGTGCACTGTGATGTGAAGCCTGGGAATATCCTTCTTGATGAAGACATGGTTGGACATGTTGCAGACTTCGGTCTTGCAAAAATTTTAGCAAAAACCAAAGAGGAAACACAGACAAGAACCATCGGCACTCTGGGCTACGTAGCACCAGAGTATGGTTCCGCAGGAAAAGTGTCCAAAAAGGGTGATGTCTATAGCTTTGGGATAATGCTGCTGGAAATAATGGCGAAAAAGAAACCCACTGATGAAATGTTTGCCGGAGAAGTGACTTTGAGGCAATGGATAAATGTATCTGTCCCCGATTATGTTCTGGAAGTGGTGGATGCTGGTTTATTGAGCATAGAAGAGGGAAGAGACATGAATGCCAGAGAAAGTATCCTAGTGTCCATCCTGGAAATAGGCTTGAGGTGTTCGGAAGAAGCAGCAGAGGATAGAATGGATATTAAGGATGTGGTGCCCAAGCTCGGGAAAATAAAATTGGCACTACAACATTGA

Protein Analysis

1111

Amino Acids

121.92

Weight (kDa)

8.7

Isoelectric Point (pI)

36.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 247 - 307 8.3e-06 Leucine rich repeat
LRR_14 PF23598 337 - 476 7.1e-10 Leucine-rich repeat region
LRR_8 PF13855 392 - 452 4.5e-07 Leucine rich repeat
LRR_14 PF23598 511 - 640 1.6e-09 Leucine-rich repeat region
LRR_8 PF13855 665 - 724 4.5e-10 Leucine rich repeat
Pkinase PF00069 832 - 1028 3.6e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 833 - 1101 9.4e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2663
Acc65I GGTACC 1 cut(s) 176
AccB1I GGYRCC 3 cut(s) 176, 272, 3292
AccB7I CCANNNNNTGG 3 cut(s) 1616, 2261, 2993
AccI GTMKAC 1 cut(s) 493
AccII CGCG 1 cut(s) 2469
AciI CCGC 5 cut(s) 376, 780, 935, 1774, 3000
AclI AACGTT 1 cut(s) 588
AclWI GGATC 8 cut(s) 137, 729, 1311, 1665, 1678, 1741, 2028, 2041
AcoI YGGCCR 2 cut(s) 72, 781
AcuI CTGAAG 3 cut(s) 509, 519, 1475
AdeI CACNNNGTG 1 cut(s) 2246
AflII CTTAAG 1 cut(s) 2573
AflIII ACRYGT 3 cut(s) 2669, 2709, 2896
AgeI ACCGGT 3 cut(s) 405, 485, 923
AhlI ACTAGT 1 cut(s) 34
AjnI CCWGG 3 cut(s) 1366, 2860, 3228
AjuI GAANNNNNNNTTGG 8 cut(s) 173, 205, 759, 791, 2874, 2906, 3299, 3331
AloI GAACNNNNNNTCC 2 cut(s) 1371, 1403
Alw21I GWGCWC 2 cut(s) 2313, 2847
Alw26I GTCTC 6 cut(s) 214, 1884, 2124, 2245, 2762, 3186
Alw44I GTGCAC 1 cut(s) 2843
AlwI GGATC 8 cut(s) 137, 729, 1311, 1665, 1678, 1741, 2028, 2041
Ama87I CYCGRG 2 cut(s) 2141, 3302
AoxI GGCC 5 cut(s) 72, 625, 737, 781, 1018
ApaLI GTGCAC 1 cut(s) 2843
ApeKI GCWGC 5 cut(s) 1417, 1982, 2701, 3049, 3260
ArsI GACNNNNNNTTYG 2 cut(s) 2623, 2655
AsiGI ACCGGT 3 cut(s) 405, 485, 923
Asp700I GAANNNNTTC 1 cut(s) 1480
Asp718I GGTACC 1 cut(s) 176
AspA2I CCTAGG 2 cut(s) 943, 1705
AspLEI GCGC 1 cut(s) 2471
AspS9I GGNCC 5 cut(s) 940, 1018, 1289, 2080, 2195
AsuC2I CCSGG 1 cut(s) 71
AsuHPI GGTGA 5 cut(s) 59, 88, 1090, 2066, 3035
AvaI CYCGRG 2 cut(s) 2141, 3302
AvaII GGWCC 4 cut(s) 940, 1289, 2080, 2195
AvrII CCTAGG 2 cut(s) 943, 1705
AxyI CCTNAGG 2 cut(s) 717, 2682
BaeGI GKGCMC 3 cut(s) 420, 2847, 3297
BamHI GGATCC 2 cut(s) 1670, 2033
BanI GGYRCC 3 cut(s) 176, 272, 3292
BarI GAAGNNNNNNTAC 6 cut(s) 30, 62, 1637, 1669, 2723, 2755
BbsI GAAGAC 1 cut(s) 2889
Bbv12I GWGCWC 2 cut(s) 2313, 2847
BbvCI CCTCAGC 1 cut(s) 1769
BbvI GCAGC 5 cut(s) 1404, 1994, 2688, 3036, 3272
BccI CCATC 5 cut(s) 1234, 2045, 2826, 2969, 3233
BceAI ACGGC 1 cut(s) 573
BcgI CGANNNNNNTGC 6 cut(s) 89, 123, 1134, 1168, 2770, 2804
BciT130I CCWGG 3 cut(s) 1368, 2862, 3230
BciVI GTATCC 2 cut(s) 2529, 3224
BclI TGATCA 1 cut(s) 2370
BcnI CCSGG 1 cut(s) 71
BcoDI GTCTC 6 cut(s) 214, 1884, 2124, 2245, 2762, 3186
BcuI ACTAGT 1 cut(s) 34
BfaI CTAG 8 cut(s) 35, 671, 944, 1706, 1721, 1997, 2328, 3218
BfmI CTRYAG 4 cut(s) 975, 1697, 2702, 3031
BfrI CTTAAG 1 cut(s) 2573
BfuI GTATCC 2 cut(s) 2529, 3224
BglII AGATCT 1 cut(s) 1686
BisI GCNGC 7 cut(s) 781, 1418, 1774, 1983, 2702, 3050, 3261
BlnI CCTAGG 2 cut(s) 943, 1705
BlsI GCNGC 7 cut(s) 782, 1419, 1775, 1984, 2703, 3051, 3262
Bme1390I CCNGG 4 cut(s) 71, 1368, 2862, 3230
Bme18I GGWCC 4 cut(s) 940, 1289, 2080, 2195
BmeT110I CYCGRG 2 cut(s) 2141, 3302
BmgT120I GGNCC 5 cut(s) 940, 1018, 1289, 2080, 2195
BmiI GGNNCC 6 cut(s) 178, 274, 1672, 2035, 2998, 3294
BmrFI CCNGG 4 cut(s) 71, 1368, 2862, 3230
BmsI GCATC 9 cut(s) 584, 895, 1464, 1823, 1983, 2345, 2599, 2807, 3151
BoxI GACNNNNGTC 1 cut(s) 2910
BpiI GAAGAC 1 cut(s) 2889
BpmI CTGGAG 6 cut(s) 1065, 1182, 1310, 1380, 1389, 1646
Bpu10I CCTNAGC 1 cut(s) 1769
BpuEI CTTGAG 3 cut(s) 400, 2747, 3262
BpuMI CCSGG 1 cut(s) 71
Bsa29I ATCGAT 1 cut(s) 2790
BsaAI YACGTR 2 cut(s) 1124, 2980
BsaI GGTCTC 2 cut(s) 214, 2245
BsaJI CCNNGG 6 cut(s) 243, 904, 943, 1299, 1705, 2861
BsaWI WCCGGW 3 cut(s) 405, 485, 923
BsaXI ACNNNNNCTCC 2 cut(s) 1085, 1115
Bse118I RCCGGY 4 cut(s) 405, 485, 923, 937
Bse1I ACTGG 8 cut(s) 399, 740, 1219, 1327, 1363, 1629, 1963, 2027
Bse21I CCTNAGG 2 cut(s) 717, 2682
Bse3DI GCAATG 6 cut(s) 276, 439, 459, 753, 2331, 3122
BseBI CCWGG 3 cut(s) 1368, 2862, 3230
BseCI ATCGAT 1 cut(s) 2790
BseDI CCNNGG 6 cut(s) 243, 904, 943, 1299, 1705, 2861
BseGI GGATG 9 cut(s) 420, 1226, 1814, 1871, 2037, 2302, 3166, 3225, 3292
BseMI GCAATG 6 cut(s) 276, 439, 459, 753, 2331, 3122
BseMII CTCAG 7 cut(s) 708, 1282, 1640, 1783, 2297, 2673, 2773
BseNI ACTGG 8 cut(s) 399, 740, 1219, 1327, 1363, 1629, 1963, 2027
BseRI GAGGAG 2 cut(s) 73, 76
BseSI GKGCMC 3 cut(s) 420, 2847, 3297
BseXI GCAGC 5 cut(s) 1404, 1994, 2688, 3036, 3272
Bsh1236I CGCG 1 cut(s) 2469
Bsh1285I CGRYCG 1 cut(s) 490
BshFI GGCC 5 cut(s) 74, 627, 739, 783, 1020
BshNI GGYRCC 3 cut(s) 176, 272, 3292
BshTI ACCGGT 3 cut(s) 405, 485, 923
BshVI ATCGAT 1 cut(s) 2790
BsiEI CGRYCG 1 cut(s) 490
BsiHKAI GWGCWC 2 cut(s) 2313, 2847
BsiHKCI CYCGRG 2 cut(s) 2141, 3302
BsiSI CCGG 6 cut(s) 71, 406, 486, 924, 938, 3096
BslFI GGGAC 3 cut(s) 1278, 2563, 3119
BsmAI GTCTC 6 cut(s) 214, 1884, 2124, 2245, 2762, 3186
BsmFI GGGAC 3 cut(s) 1278, 2563, 3119
BsmI GAATGC 4 cut(s) 21, 1985, 2621, 3205
BsnI GGCC 5 cut(s) 74, 627, 739, 783, 1020
Bso31I GGTCTC 2 cut(s) 214, 2245
BsoBI CYCGRG 2 cut(s) 2141, 3302
Bsp1286I GDGCHC 4 cut(s) 420, 2313, 2847, 3297
Bsp1407I TGTACA 1 cut(s) 2526
Bsp19I CCATGG 1 cut(s) 1299
BspACI CCGC 5 cut(s) 376, 780, 935, 1774, 3000
BspANI GGCC 5 cut(s) 74, 627, 739, 783, 1020
BspCNI CTCAG 7 cut(s) 709, 1281, 1641, 1782, 2296, 2674, 2772
BspDI ATCGAT 1 cut(s) 2790
BspFNI CGCG 1 cut(s) 2469
BspLI GGNNCC 6 cut(s) 178, 274, 1672, 2035, 2998, 3294
BspMAI CTGCAG 2 cut(s) 1701, 2706
BspPI GGATC 8 cut(s) 137, 729, 1311, 1665, 1678, 1741, 2028, 2041
BspT107I GGYRCC 3 cut(s) 176, 272, 3292
BspTI CTTAAG 1 cut(s) 2573
BspTNI GGTCTC 2 cut(s) 214, 2245
BsrDI GCAATG 6 cut(s) 276, 439, 459, 753, 2331, 3122
BsrFI RCCGGY 4 cut(s) 405, 485, 923, 937
BsrGI TGTACA 1 cut(s) 2526
BsrI ACTGG 8 cut(s) 399, 740, 1219, 1327, 1363, 1629, 1963, 2027
BssAI RCCGGY 4 cut(s) 405, 485, 923, 937
BssECI CCNNGG 6 cut(s) 243, 904, 943, 1299, 1705, 2861
BssNAI GTATAC 1 cut(s) 494
BssT1I CCWWGG 4 cut(s) 243, 943, 1299, 1705
Bst1107I GTATAC 1 cut(s) 494
Bst2UI CCWGG 3 cut(s) 1368, 2862, 3230
Bst4CI ACNGT 8 cut(s) 157, 931, 2344, 2413, 2431, 2541, 2756, 2849
Bst6I CTCTTC 4 cut(s) 495, 796, 3177, 3184
BstAFI CTTAAG 1 cut(s) 2573
BstAUI TGTACA 1 cut(s) 2526
BstBAI YACGTR 2 cut(s) 1124, 2980
BstC8I GCNNGC 2 cut(s) 562, 785
BstDEI CTNAG 9 cut(s) 717, 1053, 1248, 1268, 1649, 1769, 2283, 2682, 2759
BstDSI CCRYGG 1 cut(s) 1299
BstF5I GGATG 9 cut(s) 420, 1226, 1814, 1871, 2037, 2302, 3166, 3225, 3292
BstFNI CGCG 1 cut(s) 2469
BstHHI GCGC 1 cut(s) 2471
BstMAI GTCTC 6 cut(s) 214, 1884, 2124, 2245, 2762, 3186
BstMCI CGRYCG 1 cut(s) 490
BstMWI GCNNNNNNNGC 2 cut(s) 116, 2973
BstNI CCWGG 3 cut(s) 1368, 2862, 3230
BstNSI RCATGY 4 cut(s) 2673, 2713, 2785, 2900
BstPAI GACNNNNGTC 1 cut(s) 2910
BstSCI CCNGG 4 cut(s) 69, 1366, 2860, 3228
BstSFI CTRYAG 4 cut(s) 975, 1697, 2702, 3031
BstSLI GKGCMC 3 cut(s) 420, 2847, 3297
BstSNI TACGTA 2 cut(s) 1124, 2980
BstUI CGCG 1 cut(s) 2469
BstV1I GCAGC 5 cut(s) 1404, 1994, 2688, 3036, 3272
BstV2I GAAGAC 1 cut(s) 2889
BstX2I RGATCY 5 cut(s) 721, 1303, 1670, 1686, 2033
BstXI CCANNNNNNTGG 3 cut(s) 1015, 1810, 1958
BstYI RGATCY 5 cut(s) 721, 1303, 1670, 1686, 2033
BstZ17I GTATAC 1 cut(s) 494
Bsu15I ATCGAT 1 cut(s) 2790
Bsu36I CCTNAGG 2 cut(s) 717, 2682
BsuI GTATCC 2 cut(s) 2529, 3224
BsuRI GGCC 5 cut(s) 74, 627, 739, 783, 1020
BsuTUI ATCGAT 1 cut(s) 2790
BtgI CCRYGG 1 cut(s) 1299
BtsCI GGATG 9 cut(s) 420, 1226, 1814, 1871, 2037, 2302, 3166, 3225, 3292
BtsI GCAGTG 1 cut(s) 2844
BtsIMutI CAGTG 6 cut(s) 1891, 2349, 2436, 2844, 2845, 3078
Cac8I GCNNGC 2 cut(s) 562, 785
CfoI GCGC 1 cut(s) 2471
Cfr10I RCCGGY 4 cut(s) 405, 485, 923, 937
Cfr13I GGNCC 5 cut(s) 940, 1018, 1289, 2080, 2195
ClaI ATCGAT 1 cut(s) 2790
CspAI ACCGGT 3 cut(s) 405, 485, 923
CspCI CAANNNNNGTGG 2 cut(s) 1576, 1611
DdeI CTNAG 9 cut(s) 717, 1053, 1248, 1268, 1649, 1769, 2283, 2682, 2759
DraI TTTAAA 1 cut(s) 546
DraIII CACNNNGTG 1 cut(s) 2246
EaeI YGGCCR 2 cut(s) 72, 781
Eam1104I CTCTTC 4 cut(s) 495, 796, 3177, 3184
EarI CTCTTC 4 cut(s) 495, 796, 3177, 3184
Eco105I TACGTA 2 cut(s) 1124, 2980
Eco130I CCWWGG 4 cut(s) 243, 943, 1299, 1705
Eco31I GGTCTC 2 cut(s) 214, 2245
Eco32I GATATC 1 cut(s) 2448
Eco47I GGWCC 4 cut(s) 940, 1289, 2080, 2195
Eco57I CTGAAG 3 cut(s) 509, 519, 1475
Eco81I CCTNAGG 2 cut(s) 717, 2682
Eco88I CYCGRG 2 cut(s) 2141, 3302
EcoRII CCWGG 3 cut(s) 1366, 2860, 3228
EcoRV GATATC 1 cut(s) 2448
EcoT14I CCWWGG 4 cut(s) 243, 943, 1299, 1705
ErhI CCWWGG 4 cut(s) 243, 943, 1299, 1705
FalI AAGNNNNNCTT 2 cut(s) 1984, 2016
FaqI GGGAC 3 cut(s) 1278, 2563, 3119
FauNDI CATATG 2 cut(s) 1681, 2317
FbaI TGATCA 1 cut(s) 2370
FblI GTMKAC 1 cut(s) 493
Fnu4HI GCNGC 7 cut(s) 781, 1418, 1774, 1983, 2702, 3050, 3261
FokI GGATG 9 cut(s) 407, 1213, 1801, 1858, 2024, 2289, 3173, 3212, 3299
Fsp4HI GCNGC 7 cut(s) 781, 1418, 1774, 1983, 2702, 3050, 3261
FspBI CTAG 8 cut(s) 35, 671, 944, 1706, 1721, 1997, 2328, 3218
GlaI GCGC 1 cut(s) 2470
GluI GCNGC 7 cut(s) 781, 1418, 1774, 1983, 2702, 3050, 3261
GsuI CTGGAG 6 cut(s) 1065, 1182, 1310, 1380, 1389, 1646
HaeIII GGCC 5 cut(s) 74, 627, 739, 783, 1020
HapII CCGG 6 cut(s) 71, 406, 486, 924, 938, 3096
HhaI GCGC 1 cut(s) 2471
Hin6I GCGC 1 cut(s) 2469
HinP1I GCGC 1 cut(s) 2469
HincII GTYRAC 1 cut(s) 1356
HindII GTYRAC 1 cut(s) 1356
HindIII AAGCTT 3 cut(s) 187, 479, 773
HinfI GANTC 7 cut(s) 234, 1266, 2152, 2182, 2281, 2347, 2647
HpaII CCGG 6 cut(s) 71, 406, 486, 924, 938, 3096
HphI GGTGA 5 cut(s) 59, 88, 1090, 2066, 3035
Hpy99I CGWCG 1 cut(s) 2469
HpyCH4III ACNGT 8 cut(s) 157, 931, 2344, 2413, 2431, 2541, 2756, 2849
HpyCH4IV ACGT 5 cut(s) 588, 982, 990, 1123, 2979
HpyF10VI GCNNNNNNNGC 2 cut(s) 116, 2973
HpyF3I CTNAG 9 cut(s) 717, 1053, 1248, 1268, 1649, 1769, 2283, 2682, 2759
HpySE526I ACGT 5 cut(s) 588, 982, 990, 1123, 2979
HspAI GCGC 1 cut(s) 2469
KpnI GGTACC 1 cut(s) 180
Ksp22I TGATCA 1 cut(s) 2370
LmnI GCTCC 1 cut(s) 2434
Lsp1109I GCAGC 5 cut(s) 1404, 1994, 2688, 3036, 3272
LweI GCATC 9 cut(s) 584, 895, 1464, 1823, 1983, 2345, 2599, 2807, 3151
MaeI CTAG 8 cut(s) 35, 671, 944, 1706, 1721, 1997, 2328, 3218
MaeII ACGT 5 cut(s) 588, 982, 990, 1123, 2979
MaeIII GTNAC 6 cut(s) 42, 235, 947, 1526, 1632, 3103
MflI RGATCY 5 cut(s) 721, 1303, 1670, 1686, 2033
MhlI GDGCHC 4 cut(s) 420, 2313, 2847, 3297
MlyI GAGTC 3 cut(s) 243, 1260, 2275
MmeI TCCRAC 7 cut(s) 114, 390, 452, 832, 981, 1827, 2872
MroXI GAANNNNTTC 1 cut(s) 1480
MslI CAYNNNNRTG 3 cut(s) 1928, 2366, 2850
MspCI CTTAAG 1 cut(s) 2573
MspI CCGG 6 cut(s) 71, 406, 486, 924, 938, 3096
MspR9I CCNGG 4 cut(s) 71, 1368, 2862, 3230
MssI GTTTAAAC 1 cut(s) 546
Mva1269I GAATGC 4 cut(s) 21, 1985, 2621, 3205
MvaI CCWGG 3 cut(s) 1368, 2862, 3230
MvnI CGCG 1 cut(s) 2469
MwoI GCNNNNNNNGC 2 cut(s) 116, 2973
NciI CCSGG 1 cut(s) 71
NcoI CCATGG 1 cut(s) 1299
NdeI CATATG 2 cut(s) 1681, 2317
NlaIV GGNNCC 6 cut(s) 178, 274, 1672, 2035, 2998, 3294
NmuCI GTSAC 3 cut(s) 235, 1526, 3103
NspI RCATGY 4 cut(s) 2673, 2713, 2785, 2900
PaeR7I CTCGAG 1 cut(s) 2141
PciI ACATGT 3 cut(s) 2669, 2709, 2896
PctI GAATGC 4 cut(s) 21, 1985, 2621, 3205
PdmI GAANNNNTTC 1 cut(s) 1480
PfeI GAWTC 4 cut(s) 2152, 2182, 2347, 2647
PflFI GACNNNGTC 1 cut(s) 1912
PflMI CCANNNNNTGG 3 cut(s) 1616, 2261, 2993
PfoI TCCNGGA 1 cut(s) 3228
PinAI ACCGGT 3 cut(s) 405, 485, 923
PkrI GCNGC 7 cut(s) 782, 1419, 1775, 1984, 2703, 3051, 3262
PleI GAGTC 3 cut(s) 242, 1260, 2275
PmeI GTTTAAAC 1 cut(s) 546
PpsI GAGTC 3 cut(s) 242, 1260, 2275
Ppu21I YACGTR 2 cut(s) 1124, 2980
PscI ACATGT 3 cut(s) 2669, 2709, 2896
PshAI GACNNNNGTC 1 cut(s) 2910
PsiI TTATAA 1 cut(s) 2663
Psp1406I AACGTT 1 cut(s) 588
Psp6I CCWGG 3 cut(s) 1366, 2860, 3228
PspGI CCWGG 3 cut(s) 1366, 2860, 3228
PspN4I GGNNCC 6 cut(s) 178, 274, 1672, 2035, 2998, 3294
PspPI GGNCC 5 cut(s) 940, 1018, 1289, 2080, 2195
PstI CTGCAG 2 cut(s) 1701, 2706
PsuI RGATCY 5 cut(s) 721, 1303, 1670, 1686, 2033
PsyI GACNNNGTC 1 cut(s) 1912
RseI CAYNNNNRTG 3 cut(s) 1928, 2366, 2850
SatI GCNGC 7 cut(s) 781, 1418, 1774, 1983, 2702, 3050, 3261
Sau96I GGNCC 5 cut(s) 940, 1018, 1289, 2080, 2195
SchI GAGTC 3 cut(s) 243, 1260, 2275
ScrFI CCNGG 4 cut(s) 71, 1368, 2862, 3230
SduI GDGCHC 4 cut(s) 420, 2313, 2847, 3297
SfaNI GCATC 9 cut(s) 584, 895, 1464, 1823, 1983, 2345, 2599, 2807, 3151
SfcI CTRYAG 4 cut(s) 975, 1697, 2702, 3031
Sfr274I CTCGAG 1 cut(s) 2141
SinI GGWCC 4 cut(s) 940, 1289, 2080, 2195
SlaI CTCGAG 1 cut(s) 2141
SmiMI CAYNNNNRTG 3 cut(s) 1928, 2366, 2850
SmlI CTYRAG 5 cut(s) 379, 2141, 2573, 2726, 3241
SmoI CTYRAG 5 cut(s) 379, 2141, 2573, 2726, 3241
SnaBI TACGTA 2 cut(s) 1124, 2980
SpeI ACTAGT 1 cut(s) 34
SsiI CCGC 5 cut(s) 376, 780, 935, 1774, 3000
SspI AATATT 3 cut(s) 745, 1788, 1966
SspMI CTAG 8 cut(s) 35, 671, 944, 1706, 1721, 1997, 2328, 3218
StyD4I CCNGG 4 cut(s) 69, 1366, 2860, 3228
StyI CCWWGG 4 cut(s) 243, 943, 1299, 1705
TaaI ACNGT 8 cut(s) 157, 931, 2344, 2413, 2431, 2541, 2756, 2849
TaiI ACGT 5 cut(s) 591, 985, 993, 1126, 2982
TaqI TCGA 5 cut(s) 794, 1916, 2142, 2339, 2790
TaqII GACCGA 1 cut(s) 2900
TatI WGTACW 4 cut(s) 391, 2405, 2526, 2706
TauI GCSGC 2 cut(s) 783, 1776
TfiI GAWTC 4 cut(s) 2152, 2182, 2347, 2647
TscAI CASTG 6 cut(s) 1891, 2349, 2436, 2844, 2852, 3085
TseFI GTSAC 3 cut(s) 235, 1526, 3103
TseI GCWGC 5 cut(s) 1417, 1982, 2701, 3049, 3260
Tsp45I GTSAC 3 cut(s) 235, 1526, 3103
TspDTI ATGAA 7 cut(s) 372, 1035, 1535, 1844, 2895, 3099, 3212
TspGWI ACGGA 2 cut(s) 2453, 2627
TspRI CASTG 6 cut(s) 1891, 2349, 2436, 2844, 2852, 3085
Tth111I GACNNNGTC 1 cut(s) 1912
Van91I CCANNNNNTGG 3 cut(s) 1616, 2261, 2993
Vha464I CTTAAG 1 cut(s) 2573
VneI GTGCAC 1 cut(s) 2843
VpaK11BI GGWCC 4 cut(s) 940, 1289, 2080, 2195
XceI RCATGY 4 cut(s) 2673, 2713, 2785, 2900
XcmI CCANNNNNNNNNTGG 3 cut(s) 157, 1833, 2968
XhoI CTCGAG 1 cut(s) 2141
XmaJI CCTAGG 2 cut(s) 943, 1705
XmiI GTMKAC 1 cut(s) 493
XmnI GAANNNNTTC 1 cut(s) 1480
XspI CTAG 8 cut(s) 35, 671, 944, 1706, 1721, 1997, 2328, 3218
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.