Rh6DG218500

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0000058
Physical Location & Seq
Reverse (-)
38905552 .. 38911763
6212 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG218500.1

Sequence Viewer

Length: 3081 bp
ATGGAGAGAGTTACTTGGTTCTTCCTGGTATACTTGATCTGTTGTACGGCGGCCAGGTGCTTAACTATAACGACACAAACCAAACTTAACATCACCACCGACGGCTCTGCTCTTCTTGCTCTCAAAGCCCGTATCACCAGTGACCCTCAAAACATTATCTTCACCAATTGGTCAACCATCACCCCTGTTTGCAACTGGGTTGGCGTCATTTGTGGTGCACACAATCATCGAGTCACAGAGTTGAACATCTCTTACTTTGGTCTCGTAGGCACCATTCCTCCTGAGCTAGGCAACTTATCATTGCTTGTTGATCTGGACATCCAAAATAATAGTTTCCAGGGTACCTTGCCTCAAGAATTAGCTCACCTGTGCCGGTTGAAGTTTATTAACTTGGGAAACAACAAGTTTATGGGAGTGATACCGTCATGGTTTGGGTCCTTGTACAAACTTCAAGGATTCAGGTTGTTTGGTAATCAATTTGTAGGTTCTATACCAGCTACCATCTTCAACTTATCTGCTCTGCAAATATTTAATCTGCGTTATAACCAACTCTCAGGTAGAATCCCCAGGCAAATCAGGAACCTAACAACGTTGAAGGTGGTCAACCTTGATTATAATAATTTTCAAGATATTCCAAATGAGATCGGCACCTTGAATCAGCTGGAAAAGTTGCTTGTGCAAAATAATGCCTTAAAAGGGCCTATTCCTATGGGTGTCTTCAATATCTCATCTTTGACTACGGCAAGTTTCTATGGAAACAACTTGAATGGTAGAATTCCCGACAATATATGTCAACATCTTCCAAATATTCAATACTTAAGTTTGGTTTACAATCAGTTTGATGGTCCACTTCCATCCAAGTTATGGCAATGCAAACAACTTCTTTTATTAGATTTGGGGTCTAACAAGTTCAGTGGAAGAATACCCAAATATATTGGGAACTTAACCCAAATAAAGATGATTTGGCTTGACACCAACAACTTAACAGGTACTGTACCATATGAGTTTGGTTATCTTCCAAATTTAGAGAAGTTGTTGCTCAGTGAGAATAATCTAAATGGCCATATCCCATCCTCAATCTTCAATATGTCCACAATAACATTATTAGATCTCTGCTTCAATCAGCTTTCAGGTAGCCTCCCAGCAATCATAGGCCTTACGCTTCCAAACCTAGAAGCGTTATCAGTAGGAGCGAATCACCTCAGTGGAGTAATCCCCAAATCCATCTCCAATGCTTCTGAGCTTCGGCATCTAAGCCTGGGAGCTAACTCTTTTTCTGGATTTATTCCAAGCACTCTGTGCCTCTTGACAAACCTTGAATTTCTCGAATTGGTTGGAATTAATTTGACCATTGATACCTCTACTCCAGAAGTTAATATTTTGTCTTGTCTAGCAAATCTTAGAAATTTGAGGTTTTTAGCCTTGGAAAGCAATCCATTACATTCCATGCTTCCAATTTCCTTCAGTAATTTCTCTACATCACTTGAATATCTTTATTTAGCAAAATGCAGCTTGAGAGGTAACATCCCCAGTGATATAGGGAATTTGAGTAGCTTGATAAAGTTATCCCTCGATGAGAATCAATTGAGTGGGCCAATTCCAATCTCAATGGGAAGACTACATAATCTTCAAGGTTTGTATATTTATGATAACACATTGCAAGGATACATTCCGGATGAACTTTGTCAACTAGAACACTTGAGTGATTTGATTTTGGGTGGGAATCAACTCTCTGGTTCTGTGCCTTCCTGCTTGGGTAATCTAACAGCATCTCTAAGAGATCTATCCTTATGGTCCAATTTATTGAATTCCACAATACCATCTACCTTGTGGGGACTTACAAATATCTTGGAAATAGACTTGTCATTCAATTCTGTAATCGGACCTCTATCAAGTGGTGTTGGTAATTTGAAAGTTGCTATAAACATAGATGTATCATACAACCAATTATCTGGTAGTATACCAAGCAGCATTGGGAGTTTATTGAATTTGGTCAATCTCTCCTTAGCACATAATAATCTAGAAGGCCCTATTCCTAGTTCCTTTGCTACATGTTCAAGCTTAGAACTATTGGATTTATCTCAGAACAGTCTCTCTGGAGTGATTCCAAAGTCTCTTGAAGCACTCTCATATCTCAAGTATCTGAATCTATCTTTCAACATACTCCAAGGAGAAATTCCAACCGGCGGTCCATTCAAAAACTTCCCTGCTGAATCATTTGTTTCAAACCGTGGACTCTGTGGTGCATCCCATTTTCAACTTCCACCATGCAAAACAAAAACTAGTATATTTATCTGGAAATATGCTATTCCCGGGATCTTGTCAGCAATGCTTCTAGCTACTTCCATATTTTGGATTTTGATGTTCCGCAGAAAAAAGAATGCGAATGCTGCAGCACATACTATCTTGACCCCTCAAGTTTTATGGAGACGAGTTTCGTACCAAGAGCTCCAAAGTGCAACAAATGGATTCAATGAAAGCAACTTACTTGGTACTGGGGGTTTTGGCTCAGTATATAAAGGAACATTGTCAGATGGGATAGACGTTGCGATAAAGGTTTTCAATTTGGAGTTAGAAGGGGCATTTACAAGTTTTGAGGTTGAATGTAAAGTGCTAAGCAATGTTCGTCACCGAAATCTTGTCAAAGTCATCAGTTGCTGCAGCCAAATTGATTTCAAAGGTCTTGTGTTGAATTACATGCCTAATGGGAGCCTTGAGAAGTGGTTGTATTCTCAGAATTCTTCTTTGAACATAATGCAGAGGTTGGATATAATGATAGATGTTGCATCAGCATTGGAGTACCTTCATCATGGTTATGAAGTAGCTATTGTCCATTGTGATTTGAAGCCGAGCAACATCCTACTAGATGATGATATGGTTGCACATGTTGCTGATTTTGGTATTGCGAGACTCTTGGGTGAAGGAGATTCTATGACTCAAACCATGACCCTAGCTACAATTGGGTATATTGCTCCAGGTGTTGTACTTTATCTTTCAATTATGTATGTTGTCCTTAATTGTAAAAGTATTGTTGTTTTTATATCAATTTTATATATGCAGAGTATGGAATGGAAGGAATAG

Protein Analysis

1026

Amino Acids

112.85

Weight (kDa)

6.24

Isoelectric Point (pI)

30.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 33 - 71 2.3e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 170 - 249 4.7e-07 Leucine-rich repeat region
LRR_14 PF23598 286 - 418 3.1e-06 Leucine-rich repeat region
LRR_14 PF23598 346 - 523 3.4e-07 Leucine-rich repeat region
LRR_8 PF13855 389 - 446 1.5e-06 Leucine rich repeat
LRR_14 PF23598 486 - 623 3.3e-08 Leucine-rich repeat region
LRR_8 PF13855 663 - 720 2.3e-09 Leucine rich repeat
Pkinase PF00069 825 - 995 2.8e-32 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 828 - 995 9e-31 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 543, 615
Acc65I GGTACC 1 cut(s) 341
AccB1I GGYRCC 3 cut(s) 269, 341, 647
AccB7I CCANNNNNTGG 2 cut(s) 864, 2352
AccI GTMKAC 2 cut(s) 30, 1960
AccIII TCCGGA 1 cut(s) 1672
AciI CCGC 3 cut(s) 50, 2187, 2368
AclI AACGTT 1 cut(s) 590
AclWI GGATC 1 cut(s) 2324
AcoI YGGCCR 2 cut(s) 51, 1060
AcsI RAATTY 9 cut(s) 774, 1021, 1319, 1405, 1543, 1807, 1987, 2175, 2737
AcuI CTGAAG 1 cut(s) 1447
AcyI GRCGYC 1 cut(s) 204
AdeI CACNNNGTG 1 cut(s) 1299
AfaI GTAC 9 cut(s) 46, 343, 443, 991, 996, 2441, 2494, 2801, 2985
AfiI CCNNNNNNNGG 5 cut(s) 287, 696, 864, 2186, 2352
AflII CTTAAG 1 cut(s) 817
AflIII ACRYGT 2 cut(s) 2051, 2884
AhlI ACTAGT 1 cut(s) 2282
AjnI CCWGG 6 cut(s) 24, 53, 336, 566, 1257, 2974
AjuI GAANNNNNNNTTGG 2 cut(s) 2160, 2192
AleI CACNNNNGTG 2 cut(s) 1203, 1701
Alw21I GWGCWC 2 cut(s) 220, 2451
Alw26I GTCTC 5 cut(s) 266, 2096, 2118, 2422, 2902
Alw44I GTGCAC 1 cut(s) 216
AlwI GGATC 1 cut(s) 2324
AlwNI CAGNNNCTG 2 cut(s) 992, 2658
Ama87I CYCGRG 1 cut(s) 2312
Aor13HI TCCGGA 1 cut(s) 1672
AoxI GGCC 6 cut(s) 51, 698, 1060, 1153, 1592, 2026
ApaLI GTGCAC 1 cut(s) 216
ApeKI GCWGC 6 cut(s) 1509, 1968, 2390, 2393, 2658, 2661
ApoI RAATTY 9 cut(s) 774, 1021, 1319, 1405, 1543, 1807, 1987, 2175, 2737
AseI ATTAAT 1 cut(s) 1341
Asp718I GGTACC 1 cut(s) 341
AspS9I GGNCC 8 cut(s) 435, 698, 845, 1592, 1794, 1883, 2027, 2189
AsuC2I CCSGG 2 cut(s) 2313, 2314
AsuHPI GGTGA 8 cut(s) 85, 127, 154, 172, 356, 1190, 2621, 2930
AvaI CYCGRG 1 cut(s) 2312
AvaII GGWCC 5 cut(s) 435, 845, 1794, 1883, 2189
BaeGI GKGCMC 1 cut(s) 220
BalI TGGCCA 1 cut(s) 1062
BanI GGYRCC 3 cut(s) 269, 341, 647
BanII GRGCYC 1 cut(s) 2451
BbsI GAAGAC 2 cut(s) 709, 1621
Bbv12I GWGCWC 2 cut(s) 220, 2451
BbvI GCAGC 6 cut(s) 1521, 1980, 2377, 2405, 2645, 2673
BccI CCATC 8 cut(s) 185, 509, 836, 862, 1078, 1232, 1828, 2528
BceAI ACGGC 3 cut(s) 63, 118, 756
BcgI CGANNNNNNTGC 2 cut(s) 89, 123
BciT130I CCWGG 6 cut(s) 26, 55, 338, 568, 1259, 2976
BciVI GTATCC 1 cut(s) 1658
BcnI CCSGG 2 cut(s) 2313, 2314
BcoDI GTCTC 5 cut(s) 266, 2096, 2118, 2422, 2902
BcuI ACTAGT 1 cut(s) 2282
BfmI CTRYAG 2 cut(s) 2391, 2659
BfrI CTTAAG 1 cut(s) 817
BfuI GTATCC 1 cut(s) 1658
BglII AGATCT 2 cut(s) 1108, 1780
BisI GCNGC 7 cut(s) 51, 1510, 1969, 2391, 2394, 2659, 2662
BlpI GCTNAGC 1 cut(s) 2615
BlsI GCNGC 7 cut(s) 52, 1511, 1970, 2392, 2395, 2660, 2663
Bme1390I CCNGG 8 cut(s) 26, 55, 338, 568, 1259, 2313, 2314, 2976
Bme18I GGWCC 5 cut(s) 435, 845, 1794, 1883, 2189
BmeT110I CYCGRG 1 cut(s) 2312
BmgT120I GGNCC 8 cut(s) 435, 698, 845, 1592, 1794, 1883, 2027, 2189
BmiI GGNNCC 6 cut(s) 271, 343, 436, 581, 649, 2711
BmrFI CCNGG 8 cut(s) 26, 55, 338, 568, 1259, 2313, 2314, 2976
BmrI ACTGGG 3 cut(s) 205, 1524, 2505
BmsI GCATC 4 cut(s) 1258, 1778, 2255, 2795
BmuI ACTGGG 3 cut(s) 205, 1524, 2505
BpiI GAAGAC 2 cut(s) 709, 1621
BpmI CTGGAG 3 cut(s) 1350, 2118, 2958
Bpu10I CCTNAGC 2 cut(s) 282, 2005
Bpu1102I GCTNAGC 1 cut(s) 2615
BpuEI CTTGAG 6 cut(s) 336, 1534, 1720, 2120, 2400, 2735
BpuMI CCSGG 2 cut(s) 2313, 2314
BsaBI GATNNNNATC 1 cut(s) 1578
BsaHI GRCGYC 1 cut(s) 204
BsaI GGTCTC 1 cut(s) 266
BsaJI CCNNGG 7 cut(s) 337, 566, 1258, 1422, 2167, 2230, 2312
BsaWI WCCGGW 1 cut(s) 1672
BsaXI ACNNNNNCTCC 4 cut(s) 262, 292, 1348, 1378
Bsc4I CCNNNNNNNGG 5 cut(s) 287, 696, 864, 2186, 2352
Bse118I RCCGGY 2 cut(s) 372, 2183
Bse1I ACTGG 4 cut(s) 138, 200, 1530, 2500
Bse3DI GCAATG 5 cut(s) 299, 875, 1655, 2334, 2626
Bse8I GATNNNNATC 1 cut(s) 1578
BseAI TCCGGA 1 cut(s) 1672
BseBI CCWGG 6 cut(s) 26, 55, 338, 568, 1259, 2976
BseDI CCNNGG 7 cut(s) 337, 566, 1258, 1422, 2167, 2230, 2312
BseGI GGATG 7 cut(s) 318, 854, 1070, 1524, 1681, 2246, 2856
BseJI GATNNNNATC 1 cut(s) 1578
BseLI CCNNNNNNNGG 5 cut(s) 287, 696, 864, 2186, 2352
BseMI GCAATG 5 cut(s) 299, 875, 1655, 2334, 2626
BseMII CTCAG 8 cut(s) 273, 567, 1054, 1216, 1230, 2096, 2523, 2747
BseNI ACTGG 4 cut(s) 138, 200, 1530, 2500
BseSI GKGCMC 1 cut(s) 220
BseXI GCAGC 6 cut(s) 1521, 1980, 2377, 2405, 2645, 2673
BseYI CCCAGC 1 cut(s) 1141
BshFI GGCC 6 cut(s) 53, 700, 1062, 1155, 1594, 2028
BshNI GGYRCC 3 cut(s) 269, 341, 647
BsiHKAI GWGCWC 2 cut(s) 220, 2451
BsiHKCI CYCGRG 1 cut(s) 2312
BsiSI CCGG 4 cut(s) 373, 1673, 2184, 2313
BslFI GGGAC 1 cut(s) 1848
BslI CCNNNNNNNGG 5 cut(s) 287, 696, 864, 2186, 2352
BsmAI GTCTC 5 cut(s) 266, 2096, 2118, 2422, 2902
BsmBI CGTCTC 1 cut(s) 2422
BsmFI GGGAC 1 cut(s) 1848
BsmI GAATGC 2 cut(s) 2386, 2392
BsnI GGCC 6 cut(s) 53, 700, 1062, 1155, 1594, 2028
Bso31I GGTCTC 1 cut(s) 266
BsoBI CYCGRG 1 cut(s) 2312
Bsp1286I GDGCHC 2 cut(s) 220, 2451
Bsp13I TCCGGA 1 cut(s) 1672
Bsp1407I TGTACA 1 cut(s) 441
Bsp143I GATC 6 cut(s) 36, 310, 642, 1108, 1780, 2316
Bsp1720I GCTNAGC 1 cut(s) 2615
BspACI CCGC 3 cut(s) 50, 2187, 2368
BspANI GGCC 6 cut(s) 53, 700, 1062, 1155, 1594, 2028
BspCNI CTCAG 8 cut(s) 274, 566, 1053, 1215, 1231, 2095, 2522, 2746
BspEI TCCGGA 1 cut(s) 1672
BspLI GGNNCC 6 cut(s) 271, 343, 436, 581, 649, 2711
BspMAI CTGCAG 2 cut(s) 2395, 2663
BspPI GGATC 1 cut(s) 2324
BspQI GCTCTTC 1 cut(s) 117
BspT107I GGYRCC 3 cut(s) 269, 341, 647
BspTI CTTAAG 1 cut(s) 817
BspTNI GGTCTC 1 cut(s) 266
BsrDI GCAATG 5 cut(s) 299, 875, 1655, 2334, 2626
BsrFI RCCGGY 2 cut(s) 372, 2183
BsrGI TGTACA 1 cut(s) 441
BsrI ACTGG 4 cut(s) 138, 200, 1530, 2500
BssAI RCCGGY 2 cut(s) 372, 2183
BssECI CCNNGG 7 cut(s) 337, 566, 1258, 1422, 2167, 2230, 2312
BssMI GATC 6 cut(s) 36, 310, 642, 1108, 1780, 2316
BssNAI GTATAC 2 cut(s) 31, 1961
BssNI GRCGYC 1 cut(s) 204
BssT1I CCWWGG 2 cut(s) 1422, 2167
Bst1107I GTATAC 2 cut(s) 31, 1961
Bst2UI CCWGG 6 cut(s) 26, 55, 338, 568, 1259, 2976
Bst4CI ACNGT 4 cut(s) 423, 994, 2090, 2231
Bst6I CTCTTC 1 cut(s) 117
BstACI GRCGYC 1 cut(s) 204
BstAFI CTTAAG 1 cut(s) 817
BstAPI GCANNNNNTGC 2 cut(s) 1299, 2888
BstAUI TGTACA 1 cut(s) 441
BstDSI CCRYGG 1 cut(s) 2230
BstENI CCTNNNNNAGG 1 cut(s) 285
BstF5I GGATG 7 cut(s) 318, 854, 1070, 1524, 1681, 2246, 2856
BstKTI GATC 6 cut(s) 39, 313, 645, 1111, 1783, 2319
BstMAI GTCTC 5 cut(s) 266, 2096, 2118, 2422, 2902
BstMBI GATC 6 cut(s) 36, 310, 642, 1108, 1780, 2316
BstMWI GCNNNNNNNGC 5 cut(s) 116, 125, 1299, 2390, 2888
BstNI CCWGG 6 cut(s) 26, 55, 338, 568, 1259, 2976
BstNSI RCATGY 3 cut(s) 2055, 2701, 2888
BstSCI CCNGG 8 cut(s) 24, 53, 336, 566, 1257, 2311, 2312, 2974
BstSFI CTRYAG 2 cut(s) 2391, 2659
BstSLI GKGCMC 1 cut(s) 220
BstV1I GCAGC 6 cut(s) 1521, 1980, 2377, 2405, 2645, 2673
BstV2I GAAGAC 2 cut(s) 709, 1621
BstX2I RGATCY 3 cut(s) 1108, 1780, 2316
BstXI CCANNNNNNTGG 1 cut(s) 1952
BstYI RGATCY 3 cut(s) 1108, 1780, 2316
BstZ17I GTATAC 2 cut(s) 31, 1961
BsuI GTATCC 1 cut(s) 1658
BsuRI GGCC 6 cut(s) 53, 700, 1062, 1155, 1594, 2028
BtgI CCRYGG 1 cut(s) 2230
BtsCI GGATG 7 cut(s) 318, 854, 1070, 1524, 1681, 2246, 2856
BtsIMutI CAGTG 5 cut(s) 145, 919, 1048, 1210, 1537
CaiI CAGNNNCTG 2 cut(s) 992, 2658
Cfr10I RCCGGY 2 cut(s) 372, 2183
Cfr13I GGNCC 8 cut(s) 435, 698, 845, 1592, 1794, 1883, 2027, 2189
Cfr9I CCCGGG 1 cut(s) 2312
CseI GACGC 1 cut(s) 193
Csp6I GTAC 9 cut(s) 45, 342, 442, 990, 995, 2440, 2493, 2800, 2984
CspCI CAANNNNNGTGG 2 cut(s) 895, 930
CviAII CATG 8 cut(s) 426, 1447, 2052, 2268, 2698, 2810, 2885, 2944
CviQI GTAC 9 cut(s) 45, 342, 442, 990, 995, 2440, 2493, 2800, 2984
DpnI GATC 6 cut(s) 38, 312, 644, 1110, 1782, 2318
DpnII GATC 6 cut(s) 36, 310, 642, 1108, 1780, 2316
DraIII CACNNNGTG 1 cut(s) 1299
EaeI YGGCCR 2 cut(s) 51, 1060
Eam1104I CTCTTC 1 cut(s) 117
EarI CTCTTC 1 cut(s) 117
Ecl136II GAGCTC 1 cut(s) 2449
Eco130I CCWWGG 2 cut(s) 1422, 2167
Eco147I AGGCCT 1 cut(s) 1155
Eco24I GRGCYC 1 cut(s) 2451
Eco31I GGTCTC 1 cut(s) 266
Eco47I GGWCC 5 cut(s) 435, 845, 1794, 1883, 2189
Eco53kI GAGCTC 1 cut(s) 2449
Eco57I CTGAAG 1 cut(s) 1447
Eco88I CYCGRG 1 cut(s) 2312
EcoICRI GAGCTC 1 cut(s) 2449
EcoNI CCTNNNNNAGG 1 cut(s) 285
EcoO109I RGGNCCY 3 cut(s) 435, 698, 2027
EcoRI GAATTC 3 cut(s) 774, 1807, 2737
EcoRII CCWGG 6 cut(s) 24, 53, 336, 566, 1257, 2974
EcoT14I CCWWGG 2 cut(s) 1422, 2167
EcoT38I GRGCYC 1 cut(s) 2451
ErhI CCWWGG 2 cut(s) 1422, 2167
Esp3I CGTCTC 1 cut(s) 2422
FaeI CATG 8 cut(s) 429, 1450, 2055, 2271, 2701, 2813, 2888, 2947
FaqI GGGAC 1 cut(s) 1848
FatI CATG 8 cut(s) 425, 1446, 2051, 2267, 2697, 2809, 2884, 2943
FauNDI CATATG 1 cut(s) 1000
FblI GTMKAC 2 cut(s) 30, 1960
Fnu4HI GCNGC 7 cut(s) 51, 1510, 1969, 2391, 2394, 2659, 2662
FokI GGATG 7 cut(s) 305, 841, 1057, 1511, 1688, 2233, 2843
FriOI GRGCYC 1 cut(s) 2451
Fsp4HI GCNGC 7 cut(s) 51, 1510, 1969, 2391, 2394, 2659, 2662
GluI GCNGC 7 cut(s) 51, 1510, 1969, 2391, 2394, 2659, 2662
GsaI CCCAGC 1 cut(s) 1145
GsuI CTGGAG 3 cut(s) 1350, 2118, 2958
HaeIII GGCC 6 cut(s) 53, 700, 1062, 1155, 1594, 2028
HapII CCGG 4 cut(s) 373, 1673, 2184, 2313
HgaI GACGC 1 cut(s) 193
Hin1I GRCGYC 1 cut(s) 204
Hin1II CATG 8 cut(s) 429, 1450, 2055, 2271, 2701, 2813, 2888, 2947
HincII GTYRAC 4 cut(s) 174, 604, 794, 1688
HindII GTYRAC 4 cut(s) 174, 604, 794, 1688
HindIII AAGCTT 1 cut(s) 2059
HpaII CCGG 4 cut(s) 373, 1673, 2184, 2313
HphI GGTGA 8 cut(s) 85, 127, 154, 172, 356, 1190, 2621, 2930
Hpy188I TCNGA 6 cut(s) 1240, 1883, 2085, 2145, 2533, 2736
Hpy99I CGWCG 1 cut(s) 104
HpyAV CCTTC 8 cut(s) 589, 1471, 1755, 2018, 2570, 2813, 2915, 3067
HpyCH4III ACNGT 4 cut(s) 423, 994, 2090, 2231
HpyCH4IV ACGT 2 cut(s) 590, 2544
HpyF10VI GCNNNNNNNGC 5 cut(s) 116, 125, 1299, 2390, 2888
HpySE526I ACGT 2 cut(s) 590, 2544
Hsp92I GRCGYC 1 cut(s) 204
Hsp92II CATG 8 cut(s) 429, 1450, 2055, 2271, 2701, 2813, 2888, 2947
Kpn2I TCCGGA 1 cut(s) 1672
KpnI GGTACC 1 cut(s) 345
Kzo9I GATC 6 cut(s) 36, 310, 642, 1108, 1780, 2316
LguI GCTCTTC 1 cut(s) 117
LmnI GCTCC 5 cut(s) 1190, 1262, 2454, 2709, 2977
Lsp1109I GCAGC 6 cut(s) 1521, 1980, 2377, 2405, 2645, 2673
LweI GCATC 4 cut(s) 1258, 1778, 2255, 2795
MaeII ACGT 2 cut(s) 590, 2544
MaeIII GTNAC 5 cut(s) 10, 140, 232, 1520, 2627
MalI GATC 6 cut(s) 38, 312, 644, 1110, 1782, 2318
MboI GATC 6 cut(s) 36, 310, 642, 1108, 1780, 2316
MfeI CAATTG 3 cut(s) 166, 1583, 2958
MflI RGATCY 3 cut(s) 1108, 1780, 2316
MhlI GDGCHC 2 cut(s) 220, 2451
MlsI TGGCCA 1 cut(s) 1062
MluNI TGGCCA 1 cut(s) 1062
MlyI GAGTC 4 cut(s) 240, 2229, 2904, 2929
MmeI TCCRAC 3 cut(s) 1315, 2204, 2745
Mox20I TGGCCA 1 cut(s) 1062
MroI TCCGGA 1 cut(s) 1672
MscI TGGCCA 1 cut(s) 1062
MslI CAYNNNNRTG 3 cut(s) 1203, 1701, 2814
Msp20I TGGCCA 1 cut(s) 1062
MspA1I CMGCKG 1 cut(s) 661
MspCI CTTAAG 1 cut(s) 817
MspI CCGG 4 cut(s) 373, 1673, 2184, 2313
MspR9I CCNGG 8 cut(s) 26, 55, 338, 568, 1259, 2313, 2314, 2976
MunI CAATTG 3 cut(s) 166, 1583, 2958
Mva1269I GAATGC 2 cut(s) 2386, 2392
MvaI CCWGG 6 cut(s) 26, 55, 338, 568, 1259, 2976
MwoI GCNNNNNNNGC 5 cut(s) 116, 125, 1299, 2390, 2888
NciI CCSGG 2 cut(s) 2313, 2314
NdeI CATATG 1 cut(s) 1000
NdeII GATC 6 cut(s) 36, 310, 642, 1108, 1780, 2316
NlaIII CATG 8 cut(s) 429, 1450, 2055, 2271, 2701, 2813, 2888, 2947
NlaIV GGNNCC 6 cut(s) 271, 343, 436, 581, 649, 2711
NmeAIII GCCGAG 1 cut(s) 2874
NmuCI GTSAC 3 cut(s) 140, 232, 2627
NspI RCATGY 3 cut(s) 2055, 2701, 2888
OliI CACNNNNGTG 2 cut(s) 1203, 1701
PceI AGGCCT 1 cut(s) 1155
PciI ACATGT 2 cut(s) 2051, 2884
PciSI GCTCTTC 1 cut(s) 117
PctI GAATGC 2 cut(s) 2386, 2392
PflMI CCANNNNNTGG 2 cut(s) 864, 2352
PkrI GCNGC 7 cut(s) 52, 1511, 1970, 2392, 2395, 2660, 2663
PleI GAGTC 4 cut(s) 239, 2229, 2904, 2929
PpsI GAGTC 4 cut(s) 239, 2229, 2904, 2929
PpuMI RGGWCCY 1 cut(s) 435
PscI ACATGT 2 cut(s) 2051, 2884
PshBI ATTAAT 1 cut(s) 1341
PsiI TTATAA 2 cut(s) 543, 615
Psp124BI GAGCTC 1 cut(s) 2451
Psp1406I AACGTT 1 cut(s) 590
Psp5II RGGWCCY 1 cut(s) 435
Psp6I CCWGG 6 cut(s) 24, 53, 336, 566, 1257, 2974
PspFI CCCAGC 1 cut(s) 1141
PspGI CCWGG 6 cut(s) 24, 53, 336, 566, 1257, 2974
PspN4I GGNNCC 6 cut(s) 271, 343, 436, 581, 649, 2711
PspPI GGNCC 8 cut(s) 435, 698, 845, 1592, 1794, 1883, 2027, 2189
PspPPI RGGWCCY 1 cut(s) 435
PsrI GAACNNNNNNTAC 2 cut(s) 236, 268
PstI CTGCAG 2 cut(s) 2395, 2663
PstNI CAGNNNCTG 2 cut(s) 992, 2658
PsuI RGATCY 3 cut(s) 1108, 1780, 2316
PvuII CAGCTG 1 cut(s) 661
RsaI GTAC 9 cut(s) 46, 343, 443, 991, 996, 2441, 2494, 2801, 2985
RsaNI GTAC 9 cut(s) 45, 342, 442, 990, 995, 2440, 2493, 2800, 2984
RseI CAYNNNNRTG 3 cut(s) 1203, 1701, 2814
SacI GAGCTC 1 cut(s) 2451
SapI GCTCTTC 1 cut(s) 117
SatI GCNGC 7 cut(s) 51, 1510, 1969, 2391, 2394, 2659, 2662
Sau3AI GATC 6 cut(s) 36, 310, 642, 1108, 1780, 2316
Sau96I GGNCC 8 cut(s) 435, 698, 845, 1592, 1794, 1883, 2027, 2189
SchI GAGTC 4 cut(s) 240, 2229, 2904, 2929
ScrFI CCNGG 8 cut(s) 26, 55, 338, 568, 1259, 2313, 2314, 2976
SduI GDGCHC 2 cut(s) 220, 2451
SfaNI GCATC 4 cut(s) 1258, 1778, 2255, 2795
SfcI CTRYAG 2 cut(s) 2391, 2659
SinI GGWCC 5 cut(s) 435, 845, 1794, 1883, 2189
SmaI CCCGGG 1 cut(s) 2314
SmiMI CAYNNNNRTG 3 cut(s) 1203, 1701, 2814
SmlI CTYRAG 7 cut(s) 351, 817, 1513, 1699, 2135, 2415, 2714
SmoI CTYRAG 7 cut(s) 351, 817, 1513, 1699, 2135, 2415, 2714
SpeI ACTAGT 1 cut(s) 2282
SseBI AGGCCT 1 cut(s) 1155
SsiI CCGC 3 cut(s) 50, 2187, 2368
SspI AATATT 3 cut(s) 528, 808, 1378
SstI GAGCTC 1 cut(s) 2451
StuI AGGCCT 1 cut(s) 1155
StyD4I CCNGG 8 cut(s) 24, 53, 336, 566, 1257, 2311, 2312, 2974
StyI CCWWGG 2 cut(s) 1422, 2167
TaaI ACNGT 4 cut(s) 423, 994, 2090, 2231
TaiI ACGT 2 cut(s) 593, 2547
TaqI TCGA 3 cut(s) 229, 1326, 1572
TatI WGTACW 2 cut(s) 441, 2983
TauI GCSGC 1 cut(s) 53
TscAI CASTG 5 cut(s) 145, 919, 1048, 1210, 1537
TseFI GTSAC 3 cut(s) 140, 232, 2627
TseI GCWGC 6 cut(s) 1509, 1968, 2390, 2393, 2658, 2661
Tsp45I GTSAC 3 cut(s) 140, 232, 2627
TspDTI ATGAA 4 cut(s) 1692, 2490, 2795, 2832
TspMI CCCGGG 1 cut(s) 2312
TspRI CASTG 5 cut(s) 145, 919, 1048, 1210, 1537
Van91I CCANNNNNTGG 2 cut(s) 864, 2352
Vha464I CTTAAG 1 cut(s) 817
VneI GTGCAC 1 cut(s) 216
VpaK11BI GGWCC 5 cut(s) 435, 845, 1794, 1883, 2189
VspI ATTAAT 1 cut(s) 1341
XagI CCTNNNNNAGG 1 cut(s) 285
XapI RAATTY 9 cut(s) 774, 1021, 1319, 1405, 1543, 1807, 1987, 2175, 2737
XbaI TCTAGA 1 cut(s) 2020
XceI RCATGY 3 cut(s) 2055, 2701, 2888
XcmI CCANNNNNNNNNTGG 2 cut(s) 861, 1827
XmaI CCCGGG 1 cut(s) 2312
XmiI GTMKAC 2 cut(s) 30, 1960
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.