MD03G1138500.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
14218954 .. 14223144
4191 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1138500.v1.1.491

Sequence Viewer

Length: 3399 bp
ATGGAGAGAAGTCGTTTCCTACTGTCAAGAATGTTGTCGAGGATACATTGCTTGTTTTATATCTATATGATGATTATGGCTAATTACTTTACTCCAGGTGCATTAGCAATAGCTCATACCAATTTCAGCACAGATAAGTCTGCGCTTCTTGCGCTCAAAGCTCACATCACTAGTGACCCTCAAAACATCTTGACCGCCAACTGGTCCTCTCCCTCCAGTTCCGATATTTGCAACTGGGTTGGCGTTACTTGTGGTGCTCACCACCACAGAGTCACGGCCTTAAATCTCTCGTTCATGGGTCTTGCCGGGGTTATTCCTCCGCATCTAGGCAACCTCTCATTTCTCGTTGAGTTGGGCCTTAAGAATAATAGTTTTCATGGCCCCCTGCCCCAAGAATTGTCTCGTTTGCGCCGGTTGAAGAAGATTAACTTTGGAAACAACAACTTTATGGGAACCATTCCTTCGTGGTTTGGGTCCTTCGCTAAACTTGAATCCTTCAAGTTGTACGGTAATGGCTTCTCTGGTTTCATACCCGCTGCTATCTTCAACTTATCTGCACTCGAAGGAATTAATCTGAACAGGAATCAACTATCAGGTAGCATACCCAGAGAAATCGGCAACTTAACAATGGTGAAGGGCATATACCTTGACGACAACAAGTTCGAAGAACTTCCAAACGAGATAGGCAGTTTAGGTCAGCTGGAGGAGTTGTTTGTGCAGGACAATGCCCTAAAAGGCTCTGCTTTTTTGCCTGTCCTCAACATATCTTCTTTGATTGCTTTCTCTCTATTCGGGAACAACATGAGTGGCAGTCTTCCGGACAATATATGTGACCATCTTTGGAGTGTTCAACTAATTAATTTGGGCCAAAACCAGTTAGACGGTCCTATTCCTTCCAAACTGTGGCAATGCAAAGAGCTTCGTGAAATTACATTACAGTCTAACAATTTCCGTGGAAGCATACCCAAAAGTCTTGGCAATTTGACTTACTTGAGCAAGATATTTTTTTTCAACAATGATTTAGAAGGTACAATACCGGATGAGATTGGTGATCTTCCACAGTTAGAGAATTTGGCACTGGGGATTAATAATCTCAATGGCGTCATCCCATTCAAACTCTTCAATAAAACCACGATAAGAGAAATATCGCTTTTTTTTAATCAGCTATCAGGTGGCCTCCCAGCAAACATAGGTCTTAACGTTCCAAACCTAGAATACCTTGGTGTAGCCAGAAATAACCTGGTGGCCGGACTACTCCCTAACCTCTCCAATGCTTCCAAGCTCAGGGATTTAGAAATGAGCCAAAACTCACTTACCGGGTTTCTTCCTAGCACACTCTGCTCCTTGAAAAACCTCGAGTATCTATCCTTGTCCTCGAACAATTTGACGATTGATGCTTCTACTCCACAAGCTGAAAGCACTCTATCCTGCTTGTTTAATCTTAGAAAATTGAAAGGATTATACTTGCTAGATAATCCATTAAACACCACAATTCCAGCTTCTCGCGGGAATCTATCTACGTCACTCCAAGATATTTATTTAAGCTTTTCCAACATTAGGGGTAACATTCCCGTTGATATTGGCAACTTGAGCAGCTTGATAGCATTAAGCTTGGAACATAGTCAGTTGACTGGAGTAATTCCAACTTCAATACAAGGGCTACAAAATCTCCAAGCTTTGTATTTGAATGACAACGAACTGCAAGGACATATCCCGTATGAACTCTGTCAACTAAACAACCTAGACGAGTTACGTTTGGGTGGTAATCGGCTCTCTGGTTCTATTCCTTCCTGCTTGGGTACTTTGTCAGTAGCTCTAAGAAGTCTATCGCTAGGGTCCAATTTGTTAACTTCTAAAATACCGTCTTCCATGTGGGAACTCAACCATATATTGCACCTAAACTTGTCATCCAATTCTCTAGTTGGACCACTCTCAGAAGACATCGGAAACTTGAGAGATGTGGTGGATATGGATTTATCAAACAACTATTTCTCTGGAAACATTCCCGGTAGCATTGGTGGTCTTCAAAATATGATTAATTTTTCATTGGCAAACAATTATTTACAAGGCCCTATTCCCAGTTCATTTAAAACCTTGCTAAGCCTAGAATTCTTGGATTTGTCCAAAAACAATCTATCTGGAGAGATCCCAAAGTCATTGGAAGCACTCTTGTATCTCAAGCATCTAAATTTGTCTTTTAACAAACTCCAAGGAGAAGTTCCAACCGGCGGGCCTTTCAAAAACTTCTCTGCTGATTCATTTGTATCAAACGGTGCACTCTGTGGTGCTTCCCGACTCCATGTTCCCCTATGCAAAAATAGAACAAAAGTTAAGCCAAATTGGAGGAAAGCTAAATATATCATCTCAGGGGTCATACCAGTAATATTCCTAGCGGCCGCTGTATTGATTCTGATACTATGCAAGAAAAGGAATGTCGAAGTTGTTAGAGAAACTGCCTCACTACATCAAGTTCTTTGGAGAAGAGTTTCGCGCCTAGAACTTGTAAGGGCAACAAATGGATTTCATGAGAGTAACTTACTAGGCATGGGGGGTTTTGGCTCAGTATACAGAGGAACACTTTCAGATGGGATAGATATCGCTGTCAAGGTTTTCAATTTACAGCTAGAAGGGGCATTCAAGAGTTTTGATAAGGAATGTGAAATGCTAAACAATATCCGTCACCGGAATCTTATTAAAATCATAAGTTGCTGCGATGAACTTGATTTCAAAGCCCTGATACTTCAATTGATGCCTAATGGAAGCCTCGAAAAGTGGTTGTATTCTCCAAACCACTCCATGAATATCCTGCAGAGGTTAGACATAATGAAAGATGTTGCATTGGCACTAGAATATCTTCATCATGGTTGCTCGATACCTATCATTCATTGTGATGTGAAACCAAGCAATATACTACTAGATGAAGATATGGTTGCACATGTTGCTGATTTTGGCATTGCAAGACTCATCGGCGGTGGAGATTCAATGACAGAAACCATGACCCTGGCCACAGTTGGATATATGGCTCCAGAGTATGGGATGGAAGGAAGCGTTTCGACTAGAGGGGATGTGTATAGTTTTGGTATTGTACTCATGGAGACATTCACAAAAAGGAAGCCAACAGACGAGATGTTTGTTGGGGAAATGGATTTAAAGCAATGGGTTGCAGATTCATTATTTCCAGATGCTGCAATAGGTGAAGTTGTGGATGCCGATATACTTGGGGTGGAGGAAGATGGTGATTTCGTGAGCAGAAGGGTTTGCTTATTATCCGTTATGAGATTAGCTTTAGCTTGCTCTGCAGCATTGTCGGGAGAGAGGATTAACATGAAAGATGCCGCAATCACACTCACCAAAATCATGACCAAGTATTTGAAGGACCGTGGAGGAATGAACTCTTAG

Protein Analysis

1133

Amino Acids

124.28

Weight (kDa)

6.32

Isoelectric Point (pI)

34.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 43 - 84 6.7e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 513 - 602 7.6e-06 Leucine-rich repeat region
LRR_8 PF13855 533 - 591 6.2e-09 Leucine rich repeat
LRR_14 PF23598 606 - 736 5e-07 Leucine-rich repeat region
Pkinase PF00069 841 - 1041 2.5e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 844 - 1043 3.4e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 903, 3032
AccI GTMKAC 1 cut(s) 2565
AccII CGCG 2 cut(s) 1506, 2491
AccIII TCCGGA 1 cut(s) 817
AciI CCGC 9 cut(s) 195, 320, 534, 1506, 2229, 2393, 2397, 2970, 3336
AclI AACGTT 1 cut(s) 1200
AclWI GGATC 1 cut(s) 2140
AcoI YGGCCR 3 cut(s) 1245, 2394, 3003
AcsI RAATTY 3 cut(s) 1069, 2108, 2188
AcyI GRCGYC 1 cut(s) 1101
AdeI CACNNNGTG 1 cut(s) 2282
AfaI GTAC 4 cut(s) 506, 1030, 1801, 3087
AfiI CCNNNNNNNGG 7 cut(s) 201, 326, 903, 1284, 1557, 2228, 3032
AflII CTTAAG 1 cut(s) 359
AflIII ACRYGT 1 cut(s) 2935
AhlI ACTAGT 1 cut(s) 170
AjnI CCWGG 3 cut(s) 94, 1239, 3000
AjuI GAANNNNNNNTTGG 2 cut(s) 2202, 2234
Alw21I GWGCWC 2 cut(s) 259, 2278
Alw26I GTCTC 2 cut(s) 405, 3089
Alw44I GTGCAC 1 cut(s) 2274
AlwI GGATC 1 cut(s) 2140
AlwNI CAGNNNCTG 1 cut(s) 3185
Ama87I CYCGRG 1 cut(s) 1355
Aor13HI TCCGGA 1 cut(s) 817
ApaLI GTGCAC 1 cut(s) 2274
ApeKI GCWGC 5 cut(s) 536, 1593, 2709, 3185, 3299
ApoI RAATTY 3 cut(s) 1069, 2108, 2188
ArsI GACNNNNNNTTYG 6 cut(s) 644, 676, 3113, 3145, 3352, 3384
AseI ATTAAT 4 cut(s) 570, 858, 1086, 2037
Asp700I GAANNNNTTC 5 cut(s) 669, 2485, 2578, 2853, 3049
AspLEI GCGC 4 cut(s) 145, 154, 411, 2493
AsuC2I CCSGG 3 cut(s) 307, 1318, 2007
AsuHPI GGTGA 7 cut(s) 251, 643, 1061, 2672, 3206, 3248, 3340
AsuII TTCGAA 1 cut(s) 663
AvaI CYCGRG 1 cut(s) 1355
AvaII GGWCC 6 cut(s) 204, 474, 884, 1836, 1925, 3376
BaeGI GKGCMC 1 cut(s) 2278
BaeI ACNNNNGTAYC 2 cut(s) 2156, 2189
BalI TGGCCA 1 cut(s) 3005
BarI GAAGNNNNNNTAC 4 cut(s) 626, 658, 1017, 1049
BbsI GAAGAC 4 cut(s) 806, 1857, 1944, 2015
Bbv12I GWGCWC 2 cut(s) 259, 2278
BbvI GCAGC 5 cut(s) 523, 1605, 2696, 3172, 3311
BccI CCATC 4 cut(s) 843, 2579, 3031, 3227
BceAI ACGGC 1 cut(s) 291
BcgI CGANNNNNNTGC 2 cut(s) 3288, 3322
BciT130I CCWGG 3 cut(s) 96, 1241, 3002
BciVI GTATCC 1 cut(s) 36
BcnI CCSGG 3 cut(s) 307, 1318, 2007
BcoDI GTCTC 2 cut(s) 405, 3089
BcuI ACTAGT 1 cut(s) 170
BfmI CTRYAG 2 cut(s) 2807, 3297
BfrI CTTAAG 1 cut(s) 359
BfuI GTATCC 1 cut(s) 36
BisI GCNGC 8 cut(s) 537, 1594, 2394, 2397, 2710, 3186, 3300, 3336
BlpI GCTNAGC 1 cut(s) 2099
BlsI GCNGC 8 cut(s) 538, 1595, 2395, 2398, 2711, 3187, 3301, 3337
Bme1390I CCNGG 6 cut(s) 96, 307, 1241, 1318, 2007, 3002
Bme18I GGWCC 6 cut(s) 204, 474, 884, 1836, 1925, 3376
BmeT110I CYCGRG 1 cut(s) 1355
BmiI GGNNCC 5 cut(s) 382, 454, 475, 1837, 3024
BmrFI CCNGG 6 cut(s) 96, 307, 1241, 1318, 2007, 3002
BmrI ACTGGG 3 cut(s) 244, 1088, 2073
BmsI GCATC 7 cut(s) 331, 1384, 2191, 2739, 3172, 3196, 3322
BmuI ACTGGG 3 cut(s) 244, 1088, 2073
BpiI GAAGAC 4 cut(s) 806, 1857, 1944, 2015
BpmI CTGGAG 6 cut(s) 78, 199, 722, 1653, 2160, 3009
Bpu10I CCTNAGC 1 cut(s) 1283
Bpu1102I GCTNAGC 1 cut(s) 2099
Bpu14I TTCGAA 1 cut(s) 663
BpuEI CTTGAG 4 cut(s) 1012, 1609, 1972, 2162
BpuMI CCSGG 3 cut(s) 307, 1318, 2007
BsaBI GATNNNNATC 2 cut(s) 2594, 2876
BsaHI GRCGYC 1 cut(s) 1101
BsaJI CCNNGG 6 cut(s) 306, 952, 1219, 2209, 3000, 3379
BsaWI WCCGGW 3 cut(s) 817, 1036, 2682
BsaXI ACNNNNNCTCC 4 cut(s) 695, 725, 1653, 1683
Bsc4I CCNNNNNNNGG 7 cut(s) 201, 326, 903, 1284, 1557, 2228, 3032
Bse118I RCCGGY 2 cut(s) 411, 2225
Bse1I ACTGG 8 cut(s) 206, 216, 239, 874, 1083, 1636, 2079, 2378
Bse3DI GCAATG 4 cut(s) 46, 914, 2952, 3161
Bse8I GATNNNNATC 2 cut(s) 2594, 2876
BseAI TCCGGA 1 cut(s) 817
BseBI CCWGG 3 cut(s) 96, 1241, 3002
BseDI CCNNGG 6 cut(s) 306, 952, 1219, 2209, 3000, 3379
BseGI GGATG 6 cut(s) 1045, 1104, 1907, 3042, 3070, 3211
BseJI GATNNNNATC 2 cut(s) 2594, 2876
BseLI CCNNNNNNNGG 7 cut(s) 201, 326, 903, 1284, 1557, 2228, 3032
BseMI GCAATG 4 cut(s) 46, 914, 2952, 3161
BseMII CTCAG 4 cut(s) 1297, 1947, 2379, 2574
BseNI ACTGG 8 cut(s) 206, 216, 239, 874, 1083, 1636, 2079, 2378
BseRI GAGGAG 1 cut(s) 719
BseSI GKGCMC 1 cut(s) 2278
BseX3I CGGCCG 1 cut(s) 2394
BseXI GCAGC 5 cut(s) 523, 1605, 2696, 3172, 3311
BseYI CCCAGC 1 cut(s) 1180
BsgI GTGCAG 2 cut(s) 540, 737
Bsh1236I CGCG 2 cut(s) 1506, 2491
Bsh1285I CGRYCG 1 cut(s) 2397
BsiEI CGRYCG 1 cut(s) 2397
BsiHKAI GWGCWC 2 cut(s) 259, 2278
BsiHKCI CYCGRG 1 cut(s) 1355
BsiSI CCGG 9 cut(s) 306, 412, 818, 1037, 1248, 1317, 2007, 2226, 2683
BslI CCNNNNNNNGG 7 cut(s) 201, 326, 903, 1284, 1557, 2228, 3032
BsmAI GTCTC 2 cut(s) 405, 3089
BsmI GAATGC 1 cut(s) 2633
BsoBI CYCGRG 1 cut(s) 1355
Bsp119I TTCGAA 1 cut(s) 663
Bsp1286I GDGCHC 2 cut(s) 259, 2278
Bsp13I TCCGGA 1 cut(s) 817
Bsp143I GATC 2 cut(s) 1051, 2145
Bsp1720I GCTNAGC 1 cut(s) 2099
BspACI CCGC 9 cut(s) 195, 320, 534, 1506, 2229, 2393, 2397, 2970, 3336
BspCNI CTCAG 4 cut(s) 1296, 1946, 2378, 2573
BspEI TCCGGA 1 cut(s) 817
BspFNI CGCG 2 cut(s) 1506, 2491
BspHI TCATGA 2 cut(s) 2524, 3357
BspLI GGNNCC 5 cut(s) 382, 454, 475, 1837, 3024
BspMAI CTGCAG 2 cut(s) 2811, 3301
BspPI GGATC 1 cut(s) 2140
BspT104I TTCGAA 1 cut(s) 663
BspTI CTTAAG 1 cut(s) 359
BsrDI GCAATG 4 cut(s) 46, 914, 2952, 3161
BsrFI RCCGGY 2 cut(s) 411, 2225
BsrI ACTGG 8 cut(s) 206, 216, 239, 874, 1083, 1636, 2079, 2378
BssAI RCCGGY 2 cut(s) 411, 2225
BssECI CCNNGG 6 cut(s) 306, 952, 1219, 2209, 3000, 3379
BssMI GATC 2 cut(s) 1051, 2145
BssNAI GTATAC 1 cut(s) 2566
BssNI GRCGYC 1 cut(s) 1101
BssT1I CCWWGG 2 cut(s) 1219, 2209
Bst1107I GTATAC 1 cut(s) 2566
Bst2UI CCWGG 3 cut(s) 96, 1241, 3002
Bst6I CTCTTC 2 cut(s) 1124, 2476
BstACI GRCGYC 1 cut(s) 1101
BstAFI CTTAAG 1 cut(s) 359
BstAPI GCANNNNNTGC 2 cut(s) 1338, 2939
BstBI TTCGAA 1 cut(s) 663
BstC8I GCNNGC 2 cut(s) 2231, 3292
BstDEI CTNAG 8 cut(s) 1283, 1442, 1817, 1933, 2099, 2365, 2560, 3396
BstDSI CCRYGG 2 cut(s) 952, 3379
BstF5I GGATG 6 cut(s) 1045, 1104, 1907, 3042, 3070, 3211
BstFNI CGCG 2 cut(s) 1506, 2491
BstHHI GCGC 4 cut(s) 145, 154, 411, 2493
BstKTI GATC 2 cut(s) 1054, 2148
BstMAI GTCTC 2 cut(s) 405, 3089
BstMBI GATC 2 cut(s) 1051, 2145
BstMCI CGRYCG 1 cut(s) 2397
BstMWI GCNNNNNNNGC 7 cut(s) 149, 151, 158, 1338, 1590, 2939, 3296
BstNI CCWGG 3 cut(s) 96, 1241, 3002
BstNSI RCATGY 1 cut(s) 2939
BstSCI CCNGG 6 cut(s) 94, 305, 1239, 1316, 2005, 3000
BstSFI CTRYAG 2 cut(s) 2807, 3297
BstSLI GKGCMC 1 cut(s) 2278
BstUI CGCG 2 cut(s) 1506, 2491
BstV1I GCAGC 5 cut(s) 523, 1605, 2696, 3172, 3311
BstV2I GAAGAC 4 cut(s) 806, 1857, 1944, 2015
BstX2I RGATCY 1 cut(s) 2145
BstXI CCANNNNNNTGG 1 cut(s) 3001
BstYI RGATCY 1 cut(s) 2145
BstZ17I GTATAC 1 cut(s) 2566
BstZI CGGCCG 1 cut(s) 2394
BsuI GTATCC 1 cut(s) 36
BtgI CCRYGG 2 cut(s) 952, 3379
BtgZI GCGATG 1 cut(s) 2727
BtsCI GGATG 6 cut(s) 1045, 1104, 1907, 3042, 3070, 3211
BtsIMutI CAGTG 1 cut(s) 1076
Cac8I GCNNGC 2 cut(s) 2231, 3292
CaiI CAGNNNCTG 1 cut(s) 3185
CciI TCATGA 2 cut(s) 2524, 3357
CciNI GCGGCCGC 1 cut(s) 2394
CfoI GCGC 4 cut(s) 145, 154, 411, 2493
Cfr10I RCCGGY 2 cut(s) 411, 2225
CseI GACGC 1 cut(s) 1090
CsiI ACCWGGT 1 cut(s) 1239
Csp6I GTAC 4 cut(s) 505, 1029, 1800, 3086
CspCI CAANNNNNGTGG 4 cut(s) 787, 822, 934, 969
CviQI GTAC 4 cut(s) 505, 1029, 1800, 3086
DdeI CTNAG 8 cut(s) 1283, 1442, 1817, 1933, 2099, 2365, 2560, 3396
DpnI GATC 2 cut(s) 1053, 2147
DpnII GATC 2 cut(s) 1051, 2145
DraI TTTAAA 2 cut(s) 2089, 3150
DraIII CACNNNGTG 1 cut(s) 2282
EaeI YGGCCR 3 cut(s) 1245, 2394, 3003
EagI CGGCCG 1 cut(s) 2394
Eam1104I CTCTTC 2 cut(s) 1124, 2476
EarI CTCTTC 2 cut(s) 1124, 2476
EclXI CGGCCG 1 cut(s) 2394
Eco130I CCWWGG 2 cut(s) 1219, 2209
Eco32I GATATC 1 cut(s) 2596
Eco47I GGWCC 6 cut(s) 204, 474, 884, 1836, 1925, 3376
Eco52I CGGCCG 1 cut(s) 2394
Eco88I CYCGRG 1 cut(s) 1355
EcoO109I RGGNCCY 2 cut(s) 474, 2069
EcoRI GAATTC 1 cut(s) 2108
EcoRII CCWGG 3 cut(s) 94, 1239, 3000
EcoRV GATATC 1 cut(s) 2596
EcoT14I CCWWGG 2 cut(s) 1219, 2209
ErhI CCWWGG 2 cut(s) 1219, 2209
FalI AAGNNNNNCTT 2 cut(s) 413, 445
FauI CCCGC 3 cut(s) 541, 1499, 2222
FblI GTMKAC 1 cut(s) 2565
Fnu4HI GCNGC 8 cut(s) 537, 1594, 2394, 2397, 2710, 3186, 3300, 3336
FokI GGATG 6 cut(s) 1052, 1091, 1894, 3049, 3077, 3218
Fsp4HI GCNGC 8 cut(s) 537, 1594, 2394, 2397, 2710, 3186, 3300, 3336
GlaI GCGC 4 cut(s) 144, 153, 410, 2492
GluI GCNGC 8 cut(s) 537, 1594, 2394, 2397, 2710, 3186, 3300, 3336
GsaI CCCAGC 1 cut(s) 1184
GsuI CTGGAG 6 cut(s) 78, 199, 722, 1653, 2160, 3009
HapII CCGG 9 cut(s) 306, 412, 818, 1037, 1248, 1317, 2007, 2226, 2683
HgaI GACGC 1 cut(s) 1090
HhaI GCGC 4 cut(s) 145, 154, 411, 2493
Hin1I GRCGYC 1 cut(s) 1101
Hin6I GCGC 4 cut(s) 143, 152, 409, 2491
HinP1I GCGC 4 cut(s) 143, 152, 409, 2491
HincII GTYRAC 3 cut(s) 1629, 1730, 1848
HindII GTYRAC 3 cut(s) 1629, 1730, 1848
HindIII AAGCTT 3 cut(s) 1543, 1609, 1674
HpaI GTTAAC 1 cut(s) 1848
HpaII CCGG 9 cut(s) 306, 412, 818, 1037, 1248, 1317, 2007, 2226, 2683
HphI GGTGA 7 cut(s) 251, 643, 1061, 2672, 3206, 3248, 3340
Hpy166II GTNNAC 5 cut(s) 1629, 1730, 1848, 2276, 2566
Hpy188I TCNGA 6 cut(s) 223, 576, 1936, 1946, 2412, 2584
Hpy8I GTNNAC 5 cut(s) 1629, 1730, 1848, 2276, 2566
HpyCH4IV ACGT 3 cut(s) 1200, 1520, 1753
HpyF10VI GCNNNNNNNGC 7 cut(s) 149, 151, 158, 1338, 1590, 2939, 3296
HpyF3I CTNAG 8 cut(s) 1283, 1442, 1817, 1933, 2099, 2365, 2560, 3396
HpySE526I ACGT 3 cut(s) 1200, 1520, 1753
Hsp92I GRCGYC 1 cut(s) 1101
HspAI GCGC 4 cut(s) 143, 152, 409, 2491
Kpn2I TCCGGA 1 cut(s) 817
KspAI GTTAAC 1 cut(s) 1848
Kzo9I GATC 2 cut(s) 1051, 2145
LmnI GCTCC 2 cut(s) 1346, 3028
Lsp1109I GCAGC 5 cut(s) 523, 1605, 2696, 3172, 3311
LweI GCATC 7 cut(s) 331, 1384, 2191, 2739, 3172, 3196, 3322
MabI ACCWGGT 1 cut(s) 1239
MaeII ACGT 3 cut(s) 1200, 1520, 1753
MaeIII GTNAC 9 cut(s) 173, 244, 271, 830, 1521, 1562, 1749, 2531, 2678
MalI GATC 2 cut(s) 1053, 2147
MboI GATC 2 cut(s) 1051, 2145
MfeI CAATTG 1 cut(s) 2744
MflI RGATCY 1 cut(s) 2145
MhlI GDGCHC 2 cut(s) 259, 2278
MlsI TGGCCA 1 cut(s) 3005
MluNI TGGCCA 1 cut(s) 3005
MlyI GAGTC 3 cut(s) 279, 2289, 2955
MmeI TCCRAC 5 cut(s) 1575, 1667, 1903, 2246, 2992
Mox20I TGGCCA 1 cut(s) 3005
MroI TCCGGA 1 cut(s) 817
MroXI GAANNNNTTC 5 cut(s) 669, 2485, 2578, 2853, 3049
MscI TGGCCA 1 cut(s) 3005
MslI CAYNNNNRTG 1 cut(s) 2889
Msp20I TGGCCA 1 cut(s) 3005
MspA1I CMGCKG 3 cut(s) 536, 700, 2399
MspCI CTTAAG 1 cut(s) 359
MspI CCGG 9 cut(s) 306, 412, 818, 1037, 1248, 1317, 2007, 2226, 2683
MspR9I CCNGG 6 cut(s) 96, 307, 1241, 1318, 2007, 3002
MunI CAATTG 1 cut(s) 2744
Mva1269I GAATGC 1 cut(s) 2633
MvaI CCWGG 3 cut(s) 96, 1241, 3002
MvnI CGCG 2 cut(s) 1506, 2491
MwoI GCNNNNNNNGC 7 cut(s) 149, 151, 158, 1338, 1590, 2939, 3296
NciI CCSGG 3 cut(s) 307, 1318, 2007
NdeII GATC 2 cut(s) 1051, 2145
NlaIV GGNNCC 5 cut(s) 382, 454, 475, 1837, 3024
NmuCI GTSAC 5 cut(s) 173, 271, 830, 1521, 2678
NotI GCGGCCGC 1 cut(s) 2394
NspI RCATGY 1 cut(s) 2939
NspV TTCGAA 1 cut(s) 663
PaeR7I CTCGAG 1 cut(s) 1355
PagI TCATGA 2 cut(s) 2524, 3357
PciI ACATGT 1 cut(s) 2935
PctI GAATGC 1 cut(s) 2633
PdmI GAANNNNTTC 5 cut(s) 669, 2485, 2578, 2853, 3049
PfeI GAWTC 8 cut(s) 491, 583, 1510, 2255, 2407, 2686, 2978, 3167
PflMI CCANNNNNTGG 2 cut(s) 903, 3032
PkrI GCNGC 8 cut(s) 538, 1595, 2395, 2398, 2711, 3187, 3301, 3337
PleI GAGTC 3 cut(s) 278, 2289, 2955
PpsI GAGTC 3 cut(s) 278, 2289, 2955
PpuMI RGGWCCY 1 cut(s) 474
PscI ACATGT 1 cut(s) 2935
PshBI ATTAAT 4 cut(s) 570, 858, 1086, 2037
Psp1406I AACGTT 1 cut(s) 1200
Psp5II RGGWCCY 1 cut(s) 474
Psp6I CCWGG 3 cut(s) 94, 1239, 3000
PspFI CCCAGC 1 cut(s) 1180
PspGI CCWGG 3 cut(s) 94, 1239, 3000
PspN4I GGNNCC 5 cut(s) 382, 454, 475, 1837, 3024
PspPPI RGGWCCY 1 cut(s) 474
PspXI VCTCGAGB 1 cut(s) 1355
PstI CTGCAG 2 cut(s) 2811, 3301
PstNI CAGNNNCTG 1 cut(s) 3185
PsuI RGATCY 1 cut(s) 2145
PvuII CAGCTG 1 cut(s) 700
RsaI GTAC 4 cut(s) 506, 1030, 1801, 3087
RsaNI GTAC 4 cut(s) 505, 1029, 1800, 3086
RseI CAYNNNNRTG 1 cut(s) 2889
SatI GCNGC 8 cut(s) 537, 1594, 2394, 2397, 2710, 3186, 3300, 3336
Sau3AI GATC 2 cut(s) 1051, 2145
SchI GAGTC 3 cut(s) 279, 2289, 2955
ScrFI CCNGG 6 cut(s) 96, 307, 1241, 1318, 2007, 3002
SduI GDGCHC 2 cut(s) 259, 2278
SexAI ACCWGGT 1 cut(s) 1239
SfaNI GCATC 7 cut(s) 331, 1384, 2191, 2739, 3172, 3196, 3322
SfcI CTRYAG 2 cut(s) 2807, 3297
Sfr274I CTCGAG 1 cut(s) 1355
SfuI TTCGAA 1 cut(s) 663
SinI GGWCC 6 cut(s) 204, 474, 884, 1836, 1925, 3376
SlaI CTCGAG 1 cut(s) 1355
SmiMI CAYNNNNRTG 1 cut(s) 2889
SmlI CTYRAG 6 cut(s) 359, 991, 1355, 1588, 1951, 2177
SmoI CTYRAG 6 cut(s) 359, 991, 1355, 1588, 1951, 2177
SpeI ACTAGT 1 cut(s) 170
SsiI CCGC 9 cut(s) 195, 320, 534, 1506, 2229, 2393, 2397, 2970, 3336
SspI AATATT 1 cut(s) 2385
StyD4I CCNGG 6 cut(s) 94, 305, 1239, 1316, 2005, 3000
StyI CCWWGG 2 cut(s) 1219, 2209
TaiI ACGT 3 cut(s) 1203, 1523, 1756
TaqI TCGA 9 cut(s) 38, 561, 663, 1356, 1376, 2436, 2766, 2870, 3053
TatI WGTACW 1 cut(s) 3085
TauI GCSGC 3 cut(s) 2396, 2399, 3338
TfiI GAWTC 8 cut(s) 491, 583, 1510, 2255, 2407, 2686, 2978, 3167
TscAI CASTG 1 cut(s) 1083
TseFI GTSAC 5 cut(s) 173, 271, 830, 1521, 2678
TseI GCWGC 5 cut(s) 536, 1593, 2709, 3185, 3299
Tsp45I GTSAC 5 cut(s) 173, 271, 830, 1521, 2678
TspGWI ACGGA 3 cut(s) 941, 2666, 3259
TspRI CASTG 1 cut(s) 1083
Van91I CCANNNNNTGG 2 cut(s) 903, 3032
Vha464I CTTAAG 1 cut(s) 359
VneI GTGCAC 1 cut(s) 2274
VpaK11BI GGWCC 6 cut(s) 204, 474, 884, 1836, 1925, 3376
VspI ATTAAT 4 cut(s) 570, 858, 1086, 2037
XapI RAATTY 3 cut(s) 1069, 2108, 2188
XceI RCATGY 1 cut(s) 2939
XcmI CCANNNNNNNNNTGG 1 cut(s) 1237
XhoI CTCGAG 1 cut(s) 1355
XmiI GTMKAC 1 cut(s) 2565
XmnI GAANNNNTTC 5 cut(s) 669, 2485, 2578, 2853, 3049
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.