Rroxscaffold_2G00130000

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
66100870 .. 66104070
3201 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00130000.1

Sequence Viewer

Length: 2157 bp
ATGTGTGTTGATTTTTCAGAAATTCCAAATGAGATCGGCACTTTGAATTATCTGGAAAAATTGTTTGTGCGAGATAATGCCTTGAAAGGGCCTATCCCTATGACTATCTTCAACATGTCATCTTTGACTATTGTAAATTTCTATGGTAACAATTTGAATGGTAGAATTCCTGGCCATATTTGTCAAAATCTTTCGAATATTCAAGAGTTGAATTTGGGTGTCAATCAGTTTAATGGTCCACTTCCTTCCATATTTGGGCAATGCAAACAACTTCTTGGATTAAACTTGGAGGGTAACAGCTTGACAGGTCCTATACCATATGAGATTGGTTATCTTCCAAATTTAAAGAAATTGGGGCTCGGTCAAAATAATCTAAATGACCATATCCCATCCTCAATCTTCAATATCTCCACAATAAAAGTATTATCTCTAGAGCTCAATCAGCTTTCAGGTAGCCTCCCAGCAGACATAGGCCTTGCGCTTCCACAACTAGAAGAGTTTGGAGTAGGAGGGAATCACCTCAGTGGAGTAATCCCCATATCCATCTCCAATGCTTCTAAGCTTCAGCTTCTAGACCTGGGAGGTAACTCTTTTTCTGGATTTATTCCAACCACTCTGTGCCTCTTGACAAACCTTGAAGTGCTCGCAGTGGCCTTCAATAATTTGACCATTGATGCCTCTACTCCAGAAGTTAATATTTTTTCTTGTCTGCCAAATCTTAGAAATTTGAGGGTTTTAGTCTTCGGAAGCAATCCATTAAATGCCGAGCTTTCAATTTCCTTCAGTAATTTCTCTGCATCACTTCAAAAGCTTTGGTTAGGAAATTGCAGCTTGAGAGGTAACATCCCCAGTGATATTGGGAATTTGAGTAGCTTGATCCTTTTAGCCCTGGAATACAATCAATTAAGCGGGCCAATTCCAAGCTCAATGGGAAGGCTACATAATCTTCAAGTTTTGAATATGAGTGATAACACATTGCAAGGATACATTCCAGATGAGCTTTGTCAACTAGAAAACTTATTTCTTTTGTACTTGGGTTGGAATCAACTCTCTGGTTCTATACCTTCCTGCTTGGGTAATCTAACAGCATCTCTAAGAGGACTATACTTAAGGTCCAATTTGTTGAATTCCACAATACCATCTACCTTGTGGGGACTTACAGATATCTTGAAACTAGACTTGTCATCCAATTCTCTAATTGGACCTCTATCAGGTGCTGTTGGTAATTTGAAAGCTGCTACATACATAAATGTATCATACAACCAATTATCTGGGAGTATACCAAGTAGCATTGGGAGATTAGTGAGTTTGATCAATCTCTCCTTAGCACATAACAATCTAGAAGGCCTTATTCCTAGTTCCTTTGCTACCTGCTTAAGCTTAGAACTGTTGGATTTATCTCAGAACAGTCTCTCTGGTGTGATTCCAAAGTCTCTTGAAGCACTCTCATATCTCAAGTACTTAAATTTGTCTTTCAACAGACTCCAAGGAGAAATTCCAACCAGTGGTCCTTTCAAAAACTTCTCTGCTGAATCATTTGTTTCAAACCATGGACTCTGTGGTGCATCCCAATTTCAAGTTTCACCATGCAGAAGAAAAACTAGTATGTCTATCTTGAAATCTATTATTCCGGGGATCTTGTCTGCAGTGCTTCTAGCGATCTCCATATTTTGGATGTTGATGTTCCGTAGAAAAAAGAATGCAACAGCTGCAGCACATTTTATCTTGATGCCTCAAGTTTTACGCAGAAGGGTTTCATACCAAGAGCTCCTATGTGCGACAGATGGATTCAATGAAAGCAACTTACTTGGTATTGGGGCTTTTAGCTCAGTATATAAAGGAACATTTCCAGATGAGATAGATGTTGCAATAAAGGTTTTCAATTTGGATTTAGAAGGGGCATTTGCAAGTTTTGAGGTTGAATGTGAAATGCTAAGTAATGTTCGTCACAGAAATCTTGTCAAAGAGGATCATGAGTTCGTGAGCAAGAGGGAGTGCTTATCATCTATTATGAGATTAGCTGTTGCTTGTTCAGCAGAATCACCAGAAGAGAGGATAAACATGCAAGAGGCTGTAGCCATGCTTAAAACAATCAAGATCAAGTTTTCAAAGCAAACTGCAGCAGGTGTGGTGTTGAACTGTCGTCCTGTTTGGTAA

Protein Analysis

718

Amino Acids

78.06

Weight (kDa)

6.35

Isoelectric Point (pI)

36.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 93 - 295 1.8e-10 Leucine-rich repeat region
LRR_8 PF13855 162 - 222 8.2e-06 Leucine rich repeat
LRR_14 PF23598 260 - 393 1.5e-08 Leucine-rich repeat region
LRR_8 PF13855 294 - 350 1e-06 Leucine rich repeat
LRR_8 PF13855 437 - 495 1.1e-10 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2114
Acc36I ACCTGC 2 cut(s) 1379, 2114
AccB7I CCANNNNNTGG 2 cut(s) 1505, 1671
AccI GTMKAC 1 cut(s) 1279
AciI CCGC 1 cut(s) 909
AclWI GGATC 3 cut(s) 871, 1643, 1977
AcoI YGGCCR 1 cut(s) 172
AcuI CTGAAG 2 cut(s) 548, 766
AdeI CACNNNGTG 1 cut(s) 618
AfaI GTAC 2 cut(s) 1031, 1460
AfiI CCNNNNNNNGG 5 cut(s) 87, 255, 1211, 1505, 1671
AflII CTTAAG 2 cut(s) 1108, 1375
AflIII ACRYGT 1 cut(s) 114
AhlI ACTAGT 1 cut(s) 1601
AjnI CCWGG 3 cut(s) 169, 576, 888
AjuI GAANNNNNNNTTGG 2 cut(s) 1479, 1511
AleI CACNNNNGTG 1 cut(s) 522
AloI GAACNNNNNNTCC 2 cut(s) 1961, 1993
Alw21I GWGCWC 3 cut(s) 438, 645, 1770
Alw26I GTCTC 2 cut(s) 1415, 1437
AlwI GGATC 3 cut(s) 871, 1643, 1977
AlwNI CAGNNNCTG 1 cut(s) 1217
AoxI GGCC 6 cut(s) 89, 172, 472, 651, 911, 1345
ApeKI GCWGC 5 cut(s) 828, 1235, 1709, 1712, 2120
Asp700I GAANNNNTTC 1 cut(s) 1753
AspLEI GCGC 1 cut(s) 481
AspS9I GGNCC 7 cut(s) 89, 236, 308, 911, 1113, 1202, 1508
AsuC2I CCSGG 1 cut(s) 1632
AsuHPI GGTGA 3 cut(s) 509, 1575, 2034
AsuII TTCGAA 1 cut(s) 194
AvaII GGWCC 5 cut(s) 236, 308, 1113, 1202, 1508
BalI TGGCCA 1 cut(s) 174
BanII GRGCYC 3 cut(s) 360, 438, 1770
BbsI GAAGAC 1 cut(s) 733
Bbv12I GWGCWC 3 cut(s) 438, 645, 1770
BbvI GCAGC 5 cut(s) 840, 1222, 1696, 1724, 2132
BccI CCATC 4 cut(s) 397, 551, 1147, 1778
BciT130I CCWGG 3 cut(s) 171, 578, 890
BciVI GTATCC 1 cut(s) 977
BclI TGATCA 1 cut(s) 1311
BcnI CCSGG 1 cut(s) 1632
BcoDI GTCTC 2 cut(s) 1415, 1437
BcuI ACTAGT 1 cut(s) 1601
BfaI CTAG 9 cut(s) 431, 491, 572, 1010, 1175, 1340, 1356, 1602, 1655
BfmI CTRYAG 4 cut(s) 1644, 1710, 2073, 2118
BfrI CTTAAG 2 cut(s) 1108, 1375
BfuAI ACCTGC 2 cut(s) 1379, 2114
BfuI GTATCC 1 cut(s) 977
BisI GCNGC 5 cut(s) 829, 1236, 1710, 1713, 2121
BlsI GCNGC 5 cut(s) 830, 1237, 1711, 1714, 2122
BmcAI AGTACT 1 cut(s) 1460
Bme1390I CCNGG 4 cut(s) 171, 578, 890, 1632
Bme18I GGWCC 5 cut(s) 236, 308, 1113, 1202, 1508
BmgT120I GGNCC 7 cut(s) 89, 236, 308, 911, 1113, 1202, 1508
BmrFI CCNGG 4 cut(s) 171, 578, 890, 1632
BmrI ACTGGG 1 cut(s) 843
BmsI GCATC 5 cut(s) 664, 806, 1097, 1574, 1719
BmuI ACTGGG 1 cut(s) 843
BpiI GAAGAC 1 cut(s) 733
BpmI CTGGAG 1 cut(s) 669
Bpu10I CCTNAGC 1 cut(s) 1324
Bpu14I TTCGAA 1 cut(s) 194
BpuEI CTTGAG 3 cut(s) 853, 1439, 1719
BpuMI CCSGG 1 cut(s) 1632
BsaJI CCNNGG 5 cut(s) 577, 888, 1486, 1549, 1631
Bsc4I CCNNNNNNNGG 5 cut(s) 87, 255, 1211, 1505, 1671
Bse1I ACTGG 2 cut(s) 849, 1503
Bse3DI GCAATG 2 cut(s) 266, 974
BseBI CCWGG 3 cut(s) 171, 578, 890
BseDI CCNNGG 5 cut(s) 577, 888, 1486, 1549, 1631
BseGI GGATG 5 cut(s) 389, 843, 1184, 1565, 1680
BseLI CCNNNNNNNGG 5 cut(s) 87, 255, 1211, 1505, 1671
BseMI GCAATG 2 cut(s) 266, 974
BseMII CTCAG 3 cut(s) 535, 1415, 1842
BseNI ACTGG 2 cut(s) 849, 1503
BseXI GCAGC 5 cut(s) 840, 1222, 1696, 1724, 2132
BseYI CCCAGC 1 cut(s) 460
BshFI GGCC 6 cut(s) 91, 174, 474, 653, 913, 1347
BsiHKAI GWGCWC 3 cut(s) 438, 645, 1770
BsiSI CCGG 1 cut(s) 1631
BslFI GGGAC 1 cut(s) 1167
BslI CCNNNNNNNGG 5 cut(s) 87, 255, 1211, 1505, 1671
BsmAI GTCTC 2 cut(s) 1415, 1437
BsmFI GGGAC 1 cut(s) 1167
BsmI GAATGC 1 cut(s) 1705
BsnI GGCC 6 cut(s) 91, 174, 474, 653, 913, 1347
Bsp119I TTCGAA 1 cut(s) 194
Bsp1286I GDGCHC 4 cut(s) 360, 438, 645, 1770
Bsp143I GATC 7 cut(s) 33, 876, 1311, 1635, 1659, 1969, 2097
Bsp19I CCATGG 1 cut(s) 1549
BspACI CCGC 1 cut(s) 909
BspANI GGCC 6 cut(s) 91, 174, 474, 653, 913, 1347
BspCNI CTCAG 3 cut(s) 534, 1414, 1841
BspHI TCATGA 1 cut(s) 1972
BspMAI CTGCAG 3 cut(s) 1648, 1714, 2122
BspMI ACCTGC 2 cut(s) 1379, 2114
BspPI GGATC 3 cut(s) 871, 1643, 1977
BspT104I TTCGAA 1 cut(s) 194
BspTI CTTAAG 2 cut(s) 1108, 1375
BsrDI GCAATG 2 cut(s) 266, 974
BsrI ACTGG 2 cut(s) 849, 1503
BssECI CCNNGG 5 cut(s) 577, 888, 1486, 1549, 1631
BssMI GATC 7 cut(s) 33, 876, 1311, 1635, 1659, 1969, 2097
BssNAI GTATAC 1 cut(s) 1280
BssT1I CCWWGG 2 cut(s) 1486, 1549
Bst1107I GTATAC 1 cut(s) 1280
Bst2UI CCWGG 3 cut(s) 171, 578, 890
Bst4CI ACNGT 3 cut(s) 1389, 1409, 2141
Bst6I CTCTTC 2 cut(s) 489, 2043
BstAFI CTTAAG 2 cut(s) 1108, 1375
BstAPI GCANNNNNTGC 1 cut(s) 1709
BstBI TTCGAA 1 cut(s) 194
BstC8I GCNNGC 2 cut(s) 645, 911
BstDEI CTNAG 9 cut(s) 521, 558, 719, 1094, 1324, 1381, 1401, 1828, 1934
BstDSI CCRYGG 1 cut(s) 1549
BstENI CCTNNNNNAGG 1 cut(s) 1209
BstF5I GGATG 5 cut(s) 389, 843, 1184, 1565, 1680
BstHHI GCGC 1 cut(s) 481
BstKTI GATC 7 cut(s) 36, 879, 1314, 1638, 1662, 1972, 2100
BstMAI GTCTC 2 cut(s) 1415, 1437
BstMBI GATC 7 cut(s) 33, 876, 1311, 1635, 1659, 1969, 2097
BstMWI GCNNNNNNNGC 3 cut(s) 442, 1709, 2033
BstNI CCWGG 3 cut(s) 171, 578, 890
BstNSI RCATGY 2 cut(s) 118, 2065
BstSCI CCNGG 4 cut(s) 169, 576, 888, 1630
BstSFI CTRYAG 4 cut(s) 1644, 1710, 2073, 2118
BstV1I GCAGC 5 cut(s) 840, 1222, 1696, 1724, 2132
BstV2I GAAGAC 1 cut(s) 733
BstX2I RGATCY 1 cut(s) 1635
BstXI CCANNNNNNTGG 1 cut(s) 1271
BstYI RGATCY 1 cut(s) 1635
BstZ17I GTATAC 1 cut(s) 1280
BsuI GTATCC 1 cut(s) 977
BsuRI GGCC 6 cut(s) 91, 174, 474, 653, 913, 1347
BtgI CCRYGG 1 cut(s) 1549
BtsCI GGATG 5 cut(s) 389, 843, 1184, 1565, 1680
BtsI GCAGTG 2 cut(s) 654, 1653
BtsIMutI CAGTG 5 cut(s) 529, 654, 856, 1510, 1653
BveI ACCTGC 2 cut(s) 1379, 2114
Cac8I GCNNGC 2 cut(s) 645, 911
CaiI CAGNNNCTG 1 cut(s) 1217
CciI TCATGA 1 cut(s) 1972
CfoI GCGC 1 cut(s) 481
Cfr13I GGNCC 7 cut(s) 89, 236, 308, 911, 1113, 1202, 1508
Csp6I GTAC 2 cut(s) 1030, 1459
CviAII CATG 6 cut(s) 115, 1550, 1587, 1973, 2062, 2080
CviQI GTAC 2 cut(s) 1030, 1459
DdeI CTNAG 9 cut(s) 521, 558, 719, 1094, 1324, 1381, 1401, 1828, 1934
DpnI GATC 7 cut(s) 35, 878, 1313, 1637, 1661, 1971, 2099
DpnII GATC 7 cut(s) 33, 876, 1311, 1635, 1659, 1969, 2097
DraI TTTAAA 1 cut(s) 345
DraIII CACNNNGTG 1 cut(s) 618
EaeI YGGCCR 1 cut(s) 172
Eam1104I CTCTTC 2 cut(s) 489, 2043
EarI CTCTTC 2 cut(s) 489, 2043
Ecl136II GAGCTC 2 cut(s) 436, 1768
Eco130I CCWWGG 2 cut(s) 1486, 1549
Eco147I AGGCCT 2 cut(s) 474, 1347
Eco24I GRGCYC 3 cut(s) 360, 438, 1770
Eco32I GATATC 1 cut(s) 1165
Eco47I GGWCC 5 cut(s) 236, 308, 1113, 1202, 1508
Eco53kI GAGCTC 2 cut(s) 436, 1768
Eco57I CTGAAG 2 cut(s) 548, 766
EcoICRI GAGCTC 2 cut(s) 436, 1768
EcoNI CCTNNNNNAGG 1 cut(s) 1209
EcoO109I RGGNCCY 2 cut(s) 89, 308
EcoRI GAATTC 2 cut(s) 165, 1126
EcoRII CCWGG 3 cut(s) 169, 576, 888
EcoRV GATATC 1 cut(s) 1165
EcoT14I CCWWGG 2 cut(s) 1486, 1549
EcoT38I GRGCYC 3 cut(s) 360, 438, 1770
ErhI CCWWGG 2 cut(s) 1486, 1549
FaeI CATG 6 cut(s) 118, 1553, 1590, 1976, 2065, 2083
FaqI GGGAC 1 cut(s) 1167
FatI CATG 6 cut(s) 114, 1549, 1586, 1972, 2061, 2079
FauI CCCGC 1 cut(s) 902
FauNDI CATATG 1 cut(s) 319
FbaI TGATCA 1 cut(s) 1311
FblI GTMKAC 1 cut(s) 1279
Fnu4HI GCNGC 5 cut(s) 829, 1236, 1710, 1713, 2121
FokI GGATG 5 cut(s) 376, 830, 1171, 1552, 1687
FriOI GRGCYC 3 cut(s) 360, 438, 1770
Fsp4HI GCNGC 5 cut(s) 829, 1236, 1710, 1713, 2121
FspBI CTAG 9 cut(s) 431, 491, 572, 1010, 1175, 1340, 1356, 1602, 1655
GlaI GCGC 1 cut(s) 480
GluI GCNGC 5 cut(s) 829, 1236, 1710, 1713, 2121
GsaI CCCAGC 1 cut(s) 464
GsuI CTGGAG 1 cut(s) 669
HaeIII GGCC 6 cut(s) 91, 174, 474, 653, 913, 1347
HapII CCGG 1 cut(s) 1631
HhaI GCGC 1 cut(s) 481
Hin1II CATG 6 cut(s) 118, 1553, 1590, 1976, 2065, 2083
Hin6I GCGC 1 cut(s) 479
HinP1I GCGC 1 cut(s) 479
HincII GTYRAC 1 cut(s) 1007
HindII GTYRAC 1 cut(s) 1007
HindIII AAGCTT 3 cut(s) 560, 809, 1378
HinfI GANTC 8 cut(s) 514, 1042, 1423, 1482, 1532, 1554, 1788, 2039
HpaII CCGG 1 cut(s) 1631
HphI GGTGA 3 cut(s) 509, 1575, 2034
Hpy166II GTNNAC 3 cut(s) 239, 1007, 1280
Hpy188I TCNGA 3 cut(s) 19, 746, 1404
Hpy8I GTNNAC 3 cut(s) 239, 1007, 1280
HpyAV CCTTC 8 cut(s) 255, 664, 790, 927, 1074, 1337, 1743, 1889
HpyCH4III ACNGT 3 cut(s) 1389, 1409, 2141
HpyF10VI GCNNNNNNNGC 3 cut(s) 442, 1709, 2033
HpyF3I CTNAG 9 cut(s) 521, 558, 719, 1094, 1324, 1381, 1401, 1828, 1934
Hsp92II CATG 6 cut(s) 118, 1553, 1590, 1976, 2065, 2083
HspAI GCGC 1 cut(s) 479
Ksp22I TGATCA 1 cut(s) 1311
Kzo9I GATC 7 cut(s) 33, 876, 1311, 1635, 1659, 1969, 2097
LmnI GCTCC 1 cut(s) 1773
Lsp1109I GCAGC 5 cut(s) 840, 1222, 1696, 1724, 2132
LweI GCATC 5 cut(s) 664, 806, 1097, 1574, 1719
MaeI CTAG 9 cut(s) 431, 491, 572, 1010, 1175, 1340, 1356, 1602, 1655
MaeIII GTNAC 5 cut(s) 146, 293, 584, 839, 1946
MalI GATC 7 cut(s) 35, 878, 1313, 1637, 1661, 1971, 2099
MboI GATC 7 cut(s) 33, 876, 1311, 1635, 1659, 1969, 2097
MboII GAAGA 8 cut(s) 100, 326, 391, 506, 733, 938, 1605, 2060
MflI RGATCY 1 cut(s) 1635
MhlI GDGCHC 4 cut(s) 360, 438, 645, 1770
MlsI TGGCCA 1 cut(s) 174
MluNI TGGCCA 1 cut(s) 174
MlyI GAGTC 2 cut(s) 1476, 1548
MmeI TCCRAC 4 cut(s) 632, 1019, 1371, 1523
Mox20I TGGCCA 1 cut(s) 174
MroXI GAANNNNTTC 1 cut(s) 1753
MscI TGGCCA 1 cut(s) 174
MslI CAYNNNNRTG 1 cut(s) 522
Msp20I TGGCCA 1 cut(s) 174
MspA1I CMGCKG 1 cut(s) 1709
MspCI CTTAAG 2 cut(s) 1108, 1375
MspI CCGG 1 cut(s) 1631
MspR9I CCNGG 4 cut(s) 171, 578, 890, 1632
Mva1269I GAATGC 1 cut(s) 1705
MvaI CCWGG 3 cut(s) 171, 578, 890
MwoI GCNNNNNNNGC 3 cut(s) 442, 1709, 2033
NciI CCSGG 1 cut(s) 1632
NcoI CCATGG 1 cut(s) 1549
NdeI CATATG 1 cut(s) 319
NdeII GATC 7 cut(s) 33, 876, 1311, 1635, 1659, 1969, 2097
NlaIII CATG 6 cut(s) 118, 1553, 1590, 1976, 2065, 2083
NmeAIII GCCGAG 1 cut(s) 790
NmuCI GTSAC 1 cut(s) 1946
NspI RCATGY 2 cut(s) 118, 2065
NspV TTCGAA 1 cut(s) 194
OliI CACNNNNGTG 1 cut(s) 522
PagI TCATGA 1 cut(s) 1972
PaqCI CACCTGC 1 cut(s) 2114
PceI AGGCCT 2 cut(s) 474, 1347
PciI ACATGT 1 cut(s) 114
PctI GAATGC 1 cut(s) 1705
PdmI GAANNNNTTC 1 cut(s) 1753
PfeI GAWTC 6 cut(s) 514, 1042, 1423, 1532, 1788, 2039
PflMI CCANNNNNTGG 2 cut(s) 1505, 1671
PkrI GCNGC 5 cut(s) 830, 1237, 1711, 1714, 2122
PleI GAGTC 2 cut(s) 1476, 1548
PpsI GAGTC 2 cut(s) 1476, 1548
PpuMI RGGWCCY 1 cut(s) 308
PscI ACATGT 1 cut(s) 114
Psp124BI GAGCTC 2 cut(s) 438, 1770
Psp5II RGGWCCY 1 cut(s) 308
Psp6I CCWGG 3 cut(s) 169, 576, 888
PspFI CCCAGC 1 cut(s) 460
PspGI CCWGG 3 cut(s) 169, 576, 888
PspPI GGNCC 7 cut(s) 89, 236, 308, 911, 1113, 1202, 1508
PspPPI RGGWCCY 1 cut(s) 308
PstI CTGCAG 3 cut(s) 1648, 1714, 2122
PstNI CAGNNNCTG 1 cut(s) 1217
PsuI RGATCY 1 cut(s) 1635
PvuII CAGCTG 1 cut(s) 1709
RsaI GTAC 2 cut(s) 1031, 1460
RsaNI GTAC 2 cut(s) 1030, 1459
RseI CAYNNNNRTG 1 cut(s) 522
SacI GAGCTC 2 cut(s) 438, 1770
SatI GCNGC 5 cut(s) 829, 1236, 1710, 1713, 2121
Sau3AI GATC 7 cut(s) 33, 876, 1311, 1635, 1659, 1969, 2097
Sau96I GGNCC 7 cut(s) 89, 236, 308, 911, 1113, 1202, 1508
ScaI AGTACT 1 cut(s) 1460
SchI GAGTC 2 cut(s) 1476, 1548
ScrFI CCNGG 4 cut(s) 171, 578, 890, 1632
SduI GDGCHC 4 cut(s) 360, 438, 645, 1770
SfaNI GCATC 5 cut(s) 664, 806, 1097, 1574, 1719
SfcI CTRYAG 4 cut(s) 1644, 1710, 2073, 2118
SfuI TTCGAA 1 cut(s) 194
SinI GGWCC 5 cut(s) 236, 308, 1113, 1202, 1508
SmiMI CAYNNNNRTG 1 cut(s) 522
SmlI CTYRAG 5 cut(s) 832, 1108, 1375, 1454, 1734
SmoI CTYRAG 5 cut(s) 832, 1108, 1375, 1454, 1734
SpeI ACTAGT 1 cut(s) 1601
SseBI AGGCCT 2 cut(s) 474, 1347
SsiI CCGC 1 cut(s) 909
SspI AATATT 2 cut(s) 199, 697
SspMI CTAG 9 cut(s) 431, 491, 572, 1010, 1175, 1340, 1356, 1602, 1655
SstI GAGCTC 2 cut(s) 438, 1770
StuI AGGCCT 2 cut(s) 474, 1347
StyD4I CCNGG 4 cut(s) 169, 576, 888, 1630
StyI CCWWGG 2 cut(s) 1486, 1549
TaaI ACNGT 3 cut(s) 1389, 1409, 2141
TaqI TCGA 1 cut(s) 194
TaqII GACCGA 1 cut(s) 350
TatI WGTACW 2 cut(s) 1029, 1458
TfiI GAWTC 6 cut(s) 514, 1042, 1423, 1532, 1788, 2039
TscAI CASTG 5 cut(s) 529, 654, 856, 1510, 1653
TseFI GTSAC 1 cut(s) 1946
TseI GCWGC 5 cut(s) 828, 1235, 1709, 1712, 2120
Tsp45I GTSAC 1 cut(s) 1946
TspDTI ATGAA 2 cut(s) 1746, 1809
TspGWI ACGGA 1 cut(s) 1676
TspRI CASTG 5 cut(s) 529, 654, 856, 1510, 1653
Van91I CCANNNNNTGG 2 cut(s) 1505, 1671
Vha464I CTTAAG 2 cut(s) 1108, 1375
VpaK11BI GGWCC 5 cut(s) 236, 308, 1113, 1202, 1508
XagI CCTNNNNNAGG 1 cut(s) 1209
XbaI TCTAGA 3 cut(s) 430, 571, 1339
XceI RCATGY 2 cut(s) 118, 2065
XcmI CCANNNNNNNNNTGG 2 cut(s) 1146, 1556
XmiI GTMKAC 1 cut(s) 1279
XmnI GAANNNNTTC 1 cut(s) 1753
XspI CTAG 9 cut(s) 431, 491, 572, 1010, 1175, 1340, 1356, 1602, 1655
ZrmI AGTACT 1 cut(s) 1460
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.