Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion (By similarity)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-RING_2 | PF13639 | 11 - 57 | 2.3e-07 | Ring finger domain |
| zf-C3HC4_3 | PF13920 | 11 - 62 | 4.1e-07 | Zinc finger, C3HC4 type (RING finger) |
| zf-RING_UBOX | PF13445 | 12 - 52 | 2e-09 | RING-type zinc-finger |
| zf-C3HC4 | PF00097 | 12 - 56 | 5.3e-09 | Zinc finger, C3HC4 type (RING finger) |
| zf-C3HC4_2 | PF13923 | 12 - 52 | 5.9e-07 | Zinc finger, C3HC4 type (RING finger) |
| zf-RING_5 | PF14634 | 12 - 57 | 7.5e-07 | zinc-RING finger domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 41 |
| Acc36I | ACCTGC | 4 cut(s) | 41, 373, 454, 493 |
| AccB1I | GGYRCC | 1 cut(s) | 150 |
| AclWI | GGATC | 3 cut(s) | 59, 392, 470 |
| AcoI | YGGCCR | 4 cut(s) | 85, 347, 389, 428 |
| AcuI | CTGAAG | 5 cut(s) | 294, 318, 360, 441, 480 |
| AdeI | CACNNNGTG | 1 cut(s) | 83 |
| AfaI | GTAC | 3 cut(s) | 22, 501, 596 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 206 |
| AflIII | ACRYGT | 1 cut(s) | 583 |
| AgsI | TTSAA | 4 cut(s) | 50, 540, 641, 746 |
| AjnI | CCWGG | 1 cut(s) | 785 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 124, 156 |
| AluBI | AGCT | 7 cut(s) | 287, 314, 338, 380, 461, 634, 644 |
| AluI | AGCT | 7 cut(s) | 287, 314, 338, 380, 461, 634, 644 |
| Alw21I | GWGCWC | 1 cut(s) | 798 |
| Alw26I | GTCTC | 1 cut(s) | 246 |
| AlwI | GGATC | 3 cut(s) | 59, 392, 470 |
| AoxI | GGCC | 6 cut(s) | 85, 245, 323, 347, 389, 428 |
| ApeKI | GCWGC | 1 cut(s) | 677 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 508 |
| AspS9I | GGNCC | 3 cut(s) | 356, 437, 782 |
| AsuHPI | GGTGA | 2 cut(s) | 22, 23 |
| AvaII | GGWCC | 3 cut(s) | 356, 437, 782 |
| BaeGI | GKGCMC | 1 cut(s) | 155 |
| BalI | TGGCCA | 2 cut(s) | 87, 391 |
| BanI | GGYRCC | 1 cut(s) | 150 |
| BanII | GRGCYC | 1 cut(s) | 275 |
| Bbv12I | GWGCWC | 1 cut(s) | 798 |
| BbvI | GCAGC | 1 cut(s) | 689 |
| BccI | CCATC | 2 cut(s) | 8, 783 |
| BciT130I | CCWGG | 1 cut(s) | 787 |
| BclI | TGATCA | 1 cut(s) | 517 |
| BcoDI | GTCTC | 1 cut(s) | 246 |
| BfaI | CTAG | 1 cut(s) | 602 |
| BfmI | CTRYAG | 2 cut(s) | 255, 645 |
| BfuAI | ACCTGC | 4 cut(s) | 41, 373, 454, 493 |
| BisI | GCNGC | 1 cut(s) | 678 |
| BlsI | GCNGC | 1 cut(s) | 679 |
| Bme1390I | CCNGG | 1 cut(s) | 787 |
| Bme18I | GGWCC | 3 cut(s) | 356, 437, 782 |
| BmgT120I | GGNCC | 3 cut(s) | 356, 437, 782 |
| BmiI | GGNNCC | 4 cut(s) | 152, 420, 783, 784 |
| BmrFI | CCNGG | 1 cut(s) | 787 |
| BpmI | CTGGAG | 2 cut(s) | 324, 366 |
| BsaAI | YACGTR | 1 cut(s) | 584 |
| BsaBI | GATNNNNATC | 2 cut(s) | 63, 231 |
| BsaJI | CCNNGG | 2 cut(s) | 785, 786 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 298, 328, 394, 424 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 206 |
| Bse1I | ACTGG | 4 cut(s) | 28, 261, 358, 439 |
| Bse3DI | GCAATG | 2 cut(s) | 175, 766 |
| Bse8I | GATNNNNATC | 2 cut(s) | 63, 231 |
| BseBI | CCWGG | 1 cut(s) | 787 |
| BseDI | CCNNGG | 2 cut(s) | 785, 786 |
| BseGI | GGATG | 1 cut(s) | 10 |
| BseJI | GATNNNNATC | 2 cut(s) | 63, 231 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 206 |
| BseMI | GCAATG | 2 cut(s) | 175, 766 |
| BseNI | ACTGG | 4 cut(s) | 28, 261, 358, 439 |
| BseRI | GAGGAG | 1 cut(s) | 752 |
| BseSI | GKGCMC | 1 cut(s) | 155 |
| BseXI | GCAGC | 1 cut(s) | 689 |
| BshFI | GGCC | 6 cut(s) | 87, 247, 325, 349, 391, 430 |
| BshNI | GGYRCC | 1 cut(s) | 150 |
| BsiHKAI | GWGCWC | 1 cut(s) | 798 |
| BslFI | GGGAC | 2 cut(s) | 603, 795 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 206 |
| BsmAI | GTCTC | 1 cut(s) | 246 |
| BsmFI | GGGAC | 2 cut(s) | 603, 795 |
| BsnI | GGCC | 6 cut(s) | 87, 247, 325, 349, 391, 430 |
| Bsp1286I | GDGCHC | 3 cut(s) | 155, 275, 798 |
| Bsp143I | GATC | 4 cut(s) | 64, 397, 475, 517 |
| BspANI | GGCC | 6 cut(s) | 87, 247, 325, 349, 391, 430 |
| BspLI | GGNNCC | 4 cut(s) | 152, 420, 783, 784 |
| BspMI | ACCTGC | 4 cut(s) | 41, 373, 454, 493 |
| BspPI | GGATC | 3 cut(s) | 59, 392, 470 |
| BspT107I | GGYRCC | 1 cut(s) | 150 |
| BsrDI | GCAATG | 2 cut(s) | 175, 766 |
| BsrI | ACTGG | 4 cut(s) | 28, 261, 358, 439 |
| BssECI | CCNNGG | 2 cut(s) | 785, 786 |
| BssMI | GATC | 4 cut(s) | 64, 397, 475, 517 |
| Bst2UI | CCWGG | 1 cut(s) | 787 |
| Bst4CI | ACNGT | 3 cut(s) | 509, 594, 695 |
| Bst6I | CTCTTC | 1 cut(s) | 678 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 42 |
| BstBAI | YACGTR | 1 cut(s) | 584 |
| BstC8I | GCNNGC | 1 cut(s) | 285 |
| BstDEI | CTNAG | 1 cut(s) | 807 |
| BstF5I | GGATG | 1 cut(s) | 10 |
| BstKTI | GATC | 4 cut(s) | 67, 400, 478, 520 |
| BstMAI | GTCTC | 1 cut(s) | 246 |
| BstMBI | GATC | 4 cut(s) | 64, 397, 475, 517 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 42, 165 |
| BstNI | CCWGG | 1 cut(s) | 787 |
| BstNSI | RCATGY | 1 cut(s) | 601 |
| BstSCI | CCNGG | 1 cut(s) | 785 |
| BstSFI | CTRYAG | 2 cut(s) | 255, 645 |
| BstSLI | GKGCMC | 1 cut(s) | 155 |
| BstV1I | GCAGC | 1 cut(s) | 689 |
| BstX2I | RGATCY | 1 cut(s) | 64 |
| BstYI | RGATCY | 1 cut(s) | 64 |
| BsuRI | GGCC | 6 cut(s) | 87, 247, 325, 349, 391, 430 |
| BtsCI | GGATG | 1 cut(s) | 10 |
| BtsIMutI | CAGTG | 1 cut(s) | 268 |
| BveI | ACCTGC | 4 cut(s) | 41, 373, 454, 493 |
| Cac8I | GCNNGC | 1 cut(s) | 285 |
| Cfr13I | GGNCC | 3 cut(s) | 356, 437, 782 |
| Csp6I | GTAC | 3 cut(s) | 21, 500, 595 |
| CviAII | CATG | 3 cut(s) | 117, 137, 598 |
| CviQI | GTAC | 3 cut(s) | 21, 500, 595 |
| DdeI | CTNAG | 1 cut(s) | 807 |
| DpnI | GATC | 4 cut(s) | 66, 399, 477, 519 |
| DpnII | GATC | 4 cut(s) | 64, 397, 475, 517 |
| DraI | TTTAAA | 1 cut(s) | 231 |
| DraIII | CACNNNGTG | 1 cut(s) | 83 |
| EaeI | YGGCCR | 4 cut(s) | 85, 347, 389, 428 |
| Eam1104I | CTCTTC | 1 cut(s) | 678 |
| EarI | CTCTTC | 1 cut(s) | 678 |
| Eco24I | GRGCYC | 1 cut(s) | 275 |
| Eco47I | GGWCC | 3 cut(s) | 356, 437, 782 |
| Eco57I | CTGAAG | 5 cut(s) | 294, 318, 360, 441, 480 |
| EcoO109I | RGGNCCY | 1 cut(s) | 782 |
| EcoRII | CCWGG | 1 cut(s) | 785 |
| EcoT38I | GRGCYC | 1 cut(s) | 275 |
| FaeI | CATG | 3 cut(s) | 120, 140, 601 |
| FaqI | GGGAC | 2 cut(s) | 603, 795 |
| FatI | CATG | 3 cut(s) | 116, 136, 597 |
| FauNDI | CATATG | 1 cut(s) | 467 |
| FbaI | TGATCA | 1 cut(s) | 517 |
| Fnu4HI | GCNGC | 1 cut(s) | 678 |
| FokI | GGATG | 1 cut(s) | 17 |
| FriOI | GRGCYC | 1 cut(s) | 275 |
| Fsp4HI | GCNGC | 1 cut(s) | 678 |
| FspBI | CTAG | 1 cut(s) | 602 |
| GluI | GCNGC | 1 cut(s) | 678 |
| GsuI | CTGGAG | 2 cut(s) | 324, 366 |
| HaeIII | GGCC | 6 cut(s) | 87, 247, 325, 349, 391, 430 |
| Hin1II | CATG | 3 cut(s) | 120, 140, 601 |
| HinfI | GANTC | 5 cut(s) | 27, 50, 140, 196, 665 |
| HphI | GGTGA | 2 cut(s) | 22, 23 |
| Hpy188I | TCNGA | 2 cut(s) | 517, 558 |
| Hpy188III | TCNNGA | 3 cut(s) | 341, 383, 422 |
| HpyAV | CCTTC | 8 cut(s) | 342, 384, 423, 465, 504, 546, 701, 761 |
| HpyCH4III | ACNGT | 3 cut(s) | 509, 594, 695 |
| HpyCH4IV | ACGT | 1 cut(s) | 583 |
| HpyCH4V | TGCA | 3 cut(s) | 36, 99, 168 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 42, 165 |
| HpyF3I | CTNAG | 1 cut(s) | 807 |
| HpySE526I | ACGT | 1 cut(s) | 583 |
| Hsp92II | CATG | 3 cut(s) | 120, 140, 601 |
| KflI | GGGWCCC | 1 cut(s) | 782 |
| Ksp22I | TGATCA | 1 cut(s) | 517 |
| Kzo9I | GATC | 4 cut(s) | 64, 397, 475, 517 |
| LmnI | GCTCC | 5 cut(s) | 319, 343, 385, 424, 466 |
| Lsp1109I | GCAGC | 1 cut(s) | 689 |
| MaeI | CTAG | 1 cut(s) | 602 |
| MaeII | ACGT | 1 cut(s) | 583 |
| MaeIII | GTNAC | 2 cut(s) | 73, 748 |
| MalI | GATC | 4 cut(s) | 66, 399, 477, 519 |
| MboI | GATC | 4 cut(s) | 64, 397, 475, 517 |
| MboII | GAAGA | 2 cut(s) | 695, 716 |
| MfeI | CAATTG | 1 cut(s) | 69 |
| MflI | RGATCY | 1 cut(s) | 64 |
| MhlI | GDGCHC | 3 cut(s) | 155, 275, 798 |
| MlsI | TGGCCA | 2 cut(s) | 87, 391 |
| MluCI | AATT | 1 cut(s) | 69 |
| MluNI | TGGCCA | 2 cut(s) | 87, 391 |
| MlyI | GAGTC | 1 cut(s) | 674 |
| MmeI | TCCRAC | 1 cut(s) | 425 |
| MnlI | CCTC | 8 cut(s) | 141, 175, 210, 600, 667, 681, 730, 733 |
| Mox20I | TGGCCA | 2 cut(s) | 87, 391 |
| MroXI | GAANNNNTTC | 1 cut(s) | 508 |
| MscI | TGGCCA | 2 cut(s) | 87, 391 |
| MseI | TTAA | 3 cut(s) | 230, 578, 699 |
| MslI | CAYNNNNRTG | 1 cut(s) | 602 |
| Msp20I | TGGCCA | 2 cut(s) | 87, 391 |
| MspR9I | CCNGG | 1 cut(s) | 787 |
| MunI | CAATTG | 1 cut(s) | 69 |
| MvaI | CCWGG | 1 cut(s) | 787 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 42, 165 |
| NdeI | CATATG | 1 cut(s) | 467 |
| NdeII | GATC | 4 cut(s) | 64, 397, 475, 517 |
| NlaIII | CATG | 3 cut(s) | 120, 140, 601 |
| NlaIV | GGNNCC | 4 cut(s) | 152, 420, 783, 784 |
| NmeAIII | GCCGAG | 1 cut(s) | 223 |
| NmuCI | GTSAC | 1 cut(s) | 748 |
| NspI | RCATGY | 1 cut(s) | 601 |
| PaqCI | CACCTGC | 1 cut(s) | 41 |
| PasI | CCCWGGG | 1 cut(s) | 786 |
| PdmI | GAANNNNTTC | 1 cut(s) | 508 |
| PfeI | GAWTC | 4 cut(s) | 27, 50, 140, 196 |
| PkrI | GCNGC | 1 cut(s) | 679 |
| PleI | GAGTC | 1 cut(s) | 673 |
| PpsI | GAGTC | 1 cut(s) | 673 |
| Ppu21I | YACGTR | 1 cut(s) | 584 |
| PpuMI | RGGWCCY | 1 cut(s) | 782 |
| Psp5II | RGGWCCY | 1 cut(s) | 782 |
| Psp6I | CCWGG | 1 cut(s) | 785 |
| PspGI | CCWGG | 1 cut(s) | 785 |
| PspN4I | GGNNCC | 4 cut(s) | 152, 420, 783, 784 |
| PspPI | GGNCC | 3 cut(s) | 356, 437, 782 |
| PspPPI | RGGWCCY | 1 cut(s) | 782 |
| PsuI | RGATCY | 1 cut(s) | 64 |
| RsaI | GTAC | 3 cut(s) | 22, 501, 596 |
| RsaNI | GTAC | 3 cut(s) | 21, 500, 595 |
| RseI | CAYNNNNRTG | 1 cut(s) | 602 |
| SaqAI | TTAA | 3 cut(s) | 230, 578, 699 |
| SatI | GCNGC | 1 cut(s) | 678 |
| Sau3AI | GATC | 4 cut(s) | 64, 397, 475, 517 |
| Sau96I | GGNCC | 3 cut(s) | 356, 437, 782 |
| SchI | GAGTC | 1 cut(s) | 674 |
| ScrFI | CCNGG | 1 cut(s) | 787 |
| SduI | GDGCHC | 3 cut(s) | 155, 275, 798 |
| SfcI | CTRYAG | 2 cut(s) | 255, 645 |
| SinI | GGWCC | 3 cut(s) | 356, 437, 782 |
| SmiI | ATTTAAAT | 1 cut(s) | 231 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 602 |
| Sse9I | AATT | 1 cut(s) | 69 |
| SspI | AATATT | 1 cut(s) | 724 |
| SspMI | CTAG | 1 cut(s) | 602 |
| StyD4I | CCNGG | 1 cut(s) | 785 |
| SwaI | ATTTAAAT | 1 cut(s) | 231 |
| TaaI | ACNGT | 3 cut(s) | 509, 594, 695 |
| TaiI | ACGT | 1 cut(s) | 586 |
| TaqI | TCGA | 1 cut(s) | 668 |
| TasI | AATT | 1 cut(s) | 69 |
| TatI | WGTACW | 1 cut(s) | 594 |
| TfiI | GAWTC | 4 cut(s) | 27, 50, 140, 196 |
| Tru1I | TTAA | 3 cut(s) | 230, 578, 699 |
| Tru9I | TTAA | 3 cut(s) | 230, 578, 699 |
| TscAI | CASTG | 1 cut(s) | 268 |
| TseFI | GTSAC | 1 cut(s) | 748 |
| TseI | GCWGC | 1 cut(s) | 677 |
| Tsp45I | GTSAC | 1 cut(s) | 748 |
| TspDTI | ATGAA | 2 cut(s) | 501, 717 |
| TspGWI | ACGGA | 1 cut(s) | 767 |
| TspRI | CASTG | 1 cut(s) | 268 |
| VpaK11BI | GGWCC | 3 cut(s) | 356, 437, 782 |
| XceI | RCATGY | 1 cut(s) | 601 |
| XmnI | GAANNNNTTC | 1 cut(s) | 508 |
| XspI | CTAG | 1 cut(s) | 602 |