MD03G1180800.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
24837479 .. 24840846
3368 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1180800.v1.1.491

Sequence Viewer

Length: 2142 bp
ATGATTTTAATATATATACGAATTTATTTTATAGAACTTCCAAACGAGATGGGCAGTTTAGGTCAGTTGGAGGAGTTGTTTGTGCAGCACAATGCCCTAAAAGGCTCTGCTTTTGTGCCTGTCCTCAACATATCTTCTTTGACTGCTTTGGTTCTATTCGGGAACAACATGAGTGGCAATCTTCCGGACAATATATGTGAGCATCTTTCGAGTGTTCAAATAATTAATTTGGGTCAAAACCAGTTTGACGGTCTTATTCCCTCCAAACTGTGGCTATGCAAAGAGCTTCGTGAATTGAAATTAGGGTATAACAATTTCCGTGGAAGCATACCCAAAAGTCTTGGCAATTTGACCTACTTAACCGAGATTTATCTTCATAACAATAATTTAACAGGTGCAATACCAGATGAGATTGGTGATTTTCCACAGTTAGAGGCTTTGTCACTAGGTATTAATAATCTCAATGGCGTCATCCCATCCAAACTCTTCAATCTCTCCATGATAAGAATAATATTTCTTTCTTATAATCATCTCTCAGGTAGCCTCCCAGCAAACATAACTCTTAACGCTCCAAACCTAGAATTCCTTGGTGTAGCCGCAAATAACCTCGTGTCCGGACTACTCCCTAACCTCTCCAATGCTTCCAAGCTCAGGGTGCTAGACATGAACACAAACTCATTTACCGGGTTTCTTCCAAGCACGCTCTGTTCCTTGAAAAACCTCAAGTTTCTTTCCTTGTTCTCGAATAGTTTGACAAATGATGCTTCTACTCCACAAACAGCAAGCACCCTCTCCTGCTTGTTTAATCTTAGAAATTTGACAAGATTATCCTTGGGAGACAATCCACTAAACACCACGATTCCAGCTTCTCACAGGAATCTCTCTACATCACTCCTATATGTGGGTTTAATGAGTTCCAACATCAGGGGCAACATTCCAGTAGATATTGGCAACTTGAGCAGCTTGATATCGTTAAACCTGGGAAACAATCAGTTGAGTGGAGCAATTCCAGGTTCAATACAAAGGCTACAAAATCTTCAAGCTTTGTATTTGAATGATAACGAACTGCAAGGACATATCCCATATGAACTCTATCAACTAAACAACCTAGCAGAGATACTTTTGGATGGTAATCGTCTCTCTGGTTCTATTCCTTCCTGCTTGGGTACTTTGGCAGTAGCTCTAAGAAAATTATTGTTAGGGTCCAATTTCTTAACTTCTAAAGTACCATCTTCCTTGTGGGAACTTAAGTATATATTGCACCTAAACTTGTCATCCAATTATCTAGTTGGACCACTCTCGGAAGACATCGAAAAGTTGAAAAATGTGCTGAATATGGACTTGTCAAATAACCATTTCTCCGGAAACATTCCCAGTAGCATTGGTGGTCTTCAAAATATGATTAATCTGTCCTTGGCAAACAATTATTTAGAAGGCCCTATTCCCACTTCATTGAAAACCTTGCTGAGCCTAGAATTCTTGGATTTGTCCAAAAACAATCTATCTGGAGTGATCCCAAAGTCATTGGAAGCACTCTTGTATCTCAAGCATCTGAATTTGTCTTTCAACAAACTCCAAGGAGAAATTCCAACAGGCGGGCCTTTCGGAAACTTCTTTGCTGATTCATTTGTATCAAACGATGCGCTCTGCGGTGCTTCCCAACTCCACGTTCCATTGTGCATATATAAAACAGAAGTTAAGCCAAATTGGAGGAAAGCTAAATATATCATCTCTAGGGTCATGTCAGTAATACTCTTAGCAGCTGCTGCACTAATTCTGATACTAGGCAGGAAAAGGAATGTTGAAGTTGTAAGAGAAACTGCCTCACTAATTCAAGTTCCTTGGAGAAGAGTTTCGCGCCTAGAACTTGTAAAGACGACAACTGGATTTCATGAGACTAACTCACTTGGCACGGGGGGTTTTGGCTCAGTATACAAAGGAACACTTTCAGATGGGATAGATATCGCCGTCAAGGTTTTCAATTTACAGCTAGAAGGGGCATTCAAGAGTTTTGATAAGGAATGTGAAATGCTAAGCAATATCCGTCATCGGAATCTTATTAAAATCATAAGTTGCTGTGATGAACTTGATTTCAAAACCCTGATACTTCAATTGATGCCTAATGGAAGCCTCGAAAAGTGA

Protein Analysis

714

Amino Acids

78.15

Weight (kDa)

8.2

Isoelectric Point (pI)

33.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 119 - 178 6.3e-07 Leucine rich repeat
LRR_8 PF13855 317 - 356 4.3e-06 Leucine rich repeat
LRR_8 PF13855 321 - 380 9.7e-08 Leucine rich repeat
Pkinase PF00069 630 - 712 1.1e-09 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 633 - 712 6.3e-11 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 525
AccB7I CCANNNNNTGG 1 cut(s) 270
AccI GTMKAC 1 cut(s) 1932
AccII CGCG 1 cut(s) 1858
AccIII TCCGGA 3 cut(s) 184, 614, 1361
AciI CCGC 3 cut(s) 597, 1596, 1650
AclWI GGATC 1 cut(s) 1507
AcsI RAATTY 6 cut(s) 21, 581, 814, 1475, 1555, 1584
AcyI GRCGYC 1 cut(s) 468
AfaI GTAC 2 cut(s) 1168, 1227
AfiI CCNNNNNNNGG 5 cut(s) 270, 651, 901, 924, 1595
AflII CTTAAG 1 cut(s) 1247
AjnI CCWGG 2 cut(s) 978, 1009
AjuI GAANNNNNNNTTGG 4 cut(s) 1569, 1601, 1653, 1685
AluBI AGCT 9 cut(s) 286, 649, 866, 963, 1043, 1181, 1718, 1763, 1990
AluI AGCT 9 cut(s) 286, 649, 866, 963, 1043, 1181, 1718, 1763, 1990
Alw26I GTCTC 3 cut(s) 831, 1142, 1889
AlwI GGATC 1 cut(s) 1507
AlwNI CAGNNNCTG 1 cut(s) 1766
Aor13HI TCCGGA 3 cut(s) 184, 614, 1361
AoxI GGCC 2 cut(s) 1435, 1598
ApeKI GCWGC 5 cut(s) 85, 960, 1760, 1763, 1766
ApoI RAATTY 6 cut(s) 21, 581, 814, 1475, 1555, 1584
AseI ATTAAT 3 cut(s) 225, 453, 1404
Asp700I GAANNNNTTC 2 cut(s) 1852, 1945
AspLEI GCGC 2 cut(s) 1645, 1860
AspS9I GGNCC 4 cut(s) 1203, 1292, 1436, 1598
AsuC2I CCSGG 1 cut(s) 685
AsuHPI GGTGA 1 cut(s) 428
AvaII GGWCC 2 cut(s) 1203, 1292
BaeI ACNNNNGTAYC 2 cut(s) 1523, 1556
BauI CACGAG 1 cut(s) 608
BbsI GAAGAC 2 cut(s) 1311, 1382
BbvI GCAGC 5 cut(s) 97, 972, 1750, 1753, 1772
BccI CCATC 5 cut(s) 43, 484, 1121, 1237, 1946
BceAI ACGGC 1 cut(s) 1952
BciT130I CCWGG 2 cut(s) 980, 1011
BcnI CCSGG 1 cut(s) 685
BcoDI GTCTC 3 cut(s) 831, 1142, 1889
BfrI CTTAAG 1 cut(s) 1247
BisI GCNGC 6 cut(s) 86, 597, 961, 1761, 1764, 1767
BlpI GCTNAGC 2 cut(s) 1466, 2033
BlsI GCNGC 6 cut(s) 87, 598, 962, 1762, 1765, 1768
Bme1390I CCNGG 3 cut(s) 685, 980, 1011
Bme18I GGWCC 2 cut(s) 1203, 1292
BmgT120I GGNCC 4 cut(s) 1203, 1292, 1436, 1598
BmiI GGNNCC 1 cut(s) 1204
BmrFI CCNGG 3 cut(s) 685, 980, 1011
BmrI ACTGGG 1 cut(s) 1368
BmsI GCATC 5 cut(s) 211, 751, 1558, 1630, 2106
BmuI ACTGGG 1 cut(s) 1368
BpiI GAAGAC 2 cut(s) 1311, 1382
BplI GAGNNNNNCTC 2 cut(s) 1886, 1918
BpmI CTGGAG 1 cut(s) 1527
Bpu10I CCTNAGC 1 cut(s) 650
Bpu1102I GCTNAGC 2 cut(s) 1466, 2033
BpuEI CTTGAG 3 cut(s) 707, 976, 1529
BpuMI CCSGG 1 cut(s) 685
BsaBI GATNNNNATC 2 cut(s) 1131, 1961
BsaHI GRCGYC 1 cut(s) 468
BsaJI CCNNGG 7 cut(s) 319, 586, 831, 979, 1413, 1576, 1841
BsaWI WCCGGW 3 cut(s) 184, 614, 1361
BsaXI ACNNNNNCTCC 4 cut(s) 62, 92, 1343, 1373
Bsc4I CCNNNNNNNGG 5 cut(s) 270, 651, 901, 924, 1595
Bse1I ACTGG 4 cut(s) 241, 938, 1374, 1888
Bse8I GATNNNNATC 2 cut(s) 1131, 1961
BseAI TCCGGA 3 cut(s) 184, 614, 1361
BseBI CCWGG 2 cut(s) 980, 1011
BseDI CCNNGG 7 cut(s) 319, 586, 831, 979, 1413, 1576, 1841
BseGI GGATG 4 cut(s) 471, 476, 1132, 1274
BseJI GATNNNNATC 2 cut(s) 1131, 1961
BseLI CCNNNNNNNGG 5 cut(s) 270, 651, 901, 924, 1595
BseMII CTCAG 4 cut(s) 549, 664, 1457, 1941
BseNI ACTGG 4 cut(s) 241, 938, 1374, 1888
BseRI GAGGAG 1 cut(s) 86
BseXI GCAGC 5 cut(s) 97, 972, 1750, 1753, 1772
BseYI CCCAGC 1 cut(s) 547
BsgI GTGCAG 2 cut(s) 104, 1752
Bsh1236I CGCG 1 cut(s) 1858
BshFI GGCC 2 cut(s) 1437, 1600
BsiSI CCGG 4 cut(s) 185, 615, 684, 1362
BslI CCNNNNNNNGG 5 cut(s) 270, 651, 901, 924, 1595
BsmAI GTCTC 3 cut(s) 831, 1142, 1889
BsmBI CGTCTC 1 cut(s) 1142
BsmI GAATGC 1 cut(s) 2000
BsnI GGCC 2 cut(s) 1437, 1600
Bsp13I TCCGGA 3 cut(s) 184, 614, 1361
Bsp143I GATC 1 cut(s) 1512
Bsp1720I GCTNAGC 2 cut(s) 1466, 2033
BspACI CCGC 3 cut(s) 597, 1596, 1650
BspANI GGCC 2 cut(s) 1437, 1600
BspCNI CTCAG 4 cut(s) 548, 663, 1458, 1940
BspEI TCCGGA 3 cut(s) 184, 614, 1361
BspFNI CGCG 1 cut(s) 1858
BspHI TCATGA 1 cut(s) 1891
BspLI GGNNCC 1 cut(s) 1204
BspPI GGATC 1 cut(s) 1507
BspTI CTTAAG 1 cut(s) 1247
BsrI ACTGG 4 cut(s) 241, 938, 1374, 1888
BssECI CCNNGG 7 cut(s) 319, 586, 831, 979, 1413, 1576, 1841
BssMI GATC 1 cut(s) 1512
BssNAI GTATAC 1 cut(s) 1933
BssNI GRCGYC 1 cut(s) 468
BssSI CACGAG 1 cut(s) 608
BssT1I CCWWGG 5 cut(s) 586, 831, 1413, 1576, 1841
Bst1107I GTATAC 1 cut(s) 1933
Bst2BI CACGAG 1 cut(s) 608
Bst2UI CCWGG 2 cut(s) 980, 1011
Bst4CI ACNGT 3 cut(s) 251, 270, 429
Bst6I CTCTTC 2 cut(s) 491, 1843
BstACI GRCGYC 1 cut(s) 468
BstAFI CTTAAG 1 cut(s) 1247
BstAPI GCANNNNNTGC 1 cut(s) 1766
BstC8I GCNNGC 3 cut(s) 701, 784, 1598
BstDEI CTNAG 8 cut(s) 535, 650, 809, 1184, 1466, 1756, 1927, 2033
BstDSI CCRYGG 1 cut(s) 319
BstF5I GGATG 4 cut(s) 471, 476, 1132, 1274
BstFNI CGCG 1 cut(s) 1858
BstHHI GCGC 2 cut(s) 1645, 1860
BstKTI GATC 1 cut(s) 1515
BstMAI GTCTC 3 cut(s) 831, 1142, 1889
BstMBI GATC 1 cut(s) 1512
BstMWI GCNNNNNNNGC 3 cut(s) 655, 957, 1766
BstNI CCWGG 2 cut(s) 980, 1011
BstSCI CCNGG 3 cut(s) 683, 978, 1009
BstUI CGCG 1 cut(s) 1858
BstV1I GCAGC 5 cut(s) 97, 972, 1750, 1753, 1772
BstV2I GAAGAC 2 cut(s) 1311, 1382
BstZ17I GTATAC 1 cut(s) 1933
BsuRI GGCC 2 cut(s) 1437, 1600
BtgI CCRYGG 1 cut(s) 319
BtsCI GGATG 4 cut(s) 471, 476, 1132, 1274
Cac8I GCNNGC 3 cut(s) 701, 784, 1598
CaiI CAGNNNCTG 1 cut(s) 1766
CciI TCATGA 1 cut(s) 1891
CfoI GCGC 2 cut(s) 1645, 1860
Cfr13I GGNCC 4 cut(s) 1203, 1292, 1436, 1598
CseI GACGC 1 cut(s) 457
Csp6I GTAC 2 cut(s) 1167, 1226
CspCI CAANNNNNGTGG 4 cut(s) 154, 189, 301, 336
CviAII CATG 5 cut(s) 169, 499, 664, 1741, 1892
CviQI GTAC 2 cut(s) 1167, 1226
DdeI CTNAG 8 cut(s) 535, 650, 809, 1184, 1466, 1756, 1927, 2033
DpnI GATC 1 cut(s) 1514
DpnII GATC 1 cut(s) 1512
Eam1104I CTCTTC 2 cut(s) 491, 1843
EarI CTCTTC 2 cut(s) 491, 1843
Eco130I CCWWGG 5 cut(s) 586, 831, 1413, 1576, 1841
Eco32I GATATC 2 cut(s) 969, 1963
Eco47I GGWCC 2 cut(s) 1203, 1292
EcoO109I RGGNCCY 1 cut(s) 1436
EcoRI GAATTC 2 cut(s) 581, 1475
EcoRII CCWGG 2 cut(s) 978, 1009
EcoRV GATATC 2 cut(s) 969, 1963
EcoT14I CCWWGG 5 cut(s) 586, 831, 1413, 1576, 1841
ErhI CCWWGG 5 cut(s) 586, 831, 1413, 1576, 1841
Esp3I CGTCTC 1 cut(s) 1142
FaeI CATG 5 cut(s) 172, 502, 667, 1744, 1895
FalI AAGNNNNNCTT 2 cut(s) 1929, 1961
FatI CATG 5 cut(s) 168, 498, 663, 1740, 1891
FauI CCCGC 1 cut(s) 1589
FauNDI CATATG 1 cut(s) 1084
FblI GTMKAC 1 cut(s) 1932
Fnu4HI GCNGC 6 cut(s) 86, 597, 961, 1761, 1764, 1767
FokI GGATG 4 cut(s) 458, 463, 1139, 1261
Fsp4HI GCNGC 6 cut(s) 86, 597, 961, 1761, 1764, 1767
GlaI GCGC 2 cut(s) 1644, 1859
GluI GCNGC 6 cut(s) 86, 597, 961, 1761, 1764, 1767
GsaI CCCAGC 1 cut(s) 551
GsuI CTGGAG 1 cut(s) 1527
HaeIII GGCC 2 cut(s) 1437, 1600
HapII CCGG 4 cut(s) 185, 615, 684, 1362
HgaI GACGC 1 cut(s) 457
HhaI GCGC 2 cut(s) 1645, 1860
Hin1I GRCGYC 1 cut(s) 468
Hin1II CATG 5 cut(s) 172, 502, 667, 1744, 1895
Hin6I GCGC 2 cut(s) 1643, 1858
HinP1I GCGC 2 cut(s) 1643, 1858
HindIII AAGCTT 1 cut(s) 1041
HinfI GANTC 4 cut(s) 859, 877, 1622, 2053
HpaII CCGG 4 cut(s) 185, 615, 684, 1362
HphI GGTGA 1 cut(s) 428
Hpy166II GTNNAC 1 cut(s) 1933
Hpy188I TCNGA 6 cut(s) 1303, 1554, 1607, 1779, 1951, 2052
Hpy188III TCNNGA 9 cut(s) 160, 185, 290, 615, 742, 1362, 1506, 1892, 2005
Hpy8I GTNNAC 1 cut(s) 1933
HpyAV CCTTC 3 cut(s) 1164, 1427, 1988
HpyCH4III ACNGT 3 cut(s) 251, 270, 429
HpyCH4IV ACGT 1 cut(s) 1668
HpyCH4V TGCA 7 cut(s) 85, 279, 398, 1069, 1261, 1680, 1769
HpyF10VI GCNNNNNNNGC 3 cut(s) 655, 957, 1766
HpyF3I CTNAG 8 cut(s) 535, 650, 809, 1184, 1466, 1756, 1927, 2033
HpySE526I ACGT 1 cut(s) 1668
Hsp92I GRCGYC 1 cut(s) 468
Hsp92II CATG 5 cut(s) 172, 502, 667, 1744, 1895
HspAI GCGC 2 cut(s) 1643, 1858
Kpn2I TCCGGA 3 cut(s) 184, 614, 1361
Kzo9I GATC 1 cut(s) 1512
LmnI GCTCC 2 cut(s) 574, 1001
Lsp1109I GCAGC 5 cut(s) 97, 972, 1750, 1753, 1772
LweI GCATC 5 cut(s) 211, 751, 1558, 1630, 2106
MaeII ACGT 1 cut(s) 1668
MaeIII GTNAC 1 cut(s) 441
MalI GATC 1 cut(s) 1514
MboI GATC 1 cut(s) 1512
MfeI CAATTG 1 cut(s) 2111
MmeI TCCRAC 4 cut(s) 48, 942, 1270, 1613
MroI TCCGGA 3 cut(s) 184, 614, 1361
MroXI GAANNNNTTC 2 cut(s) 1852, 1945
MspA1I CMGCKG 1 cut(s) 1763
MspCI CTTAAG 1 cut(s) 1247
MspI CCGG 4 cut(s) 185, 615, 684, 1362
MspR9I CCNGG 3 cut(s) 685, 980, 1011
MunI CAATTG 1 cut(s) 2111
Mva1269I GAATGC 1 cut(s) 2000
MvaI CCWGG 2 cut(s) 980, 1011
MvnI CGCG 1 cut(s) 1858
MwoI GCNNNNNNNGC 3 cut(s) 655, 957, 1766
NciI CCSGG 1 cut(s) 685
NdeI CATATG 1 cut(s) 1084
NdeII GATC 1 cut(s) 1512
NlaIII CATG 5 cut(s) 172, 502, 667, 1744, 1895
NlaIV GGNNCC 1 cut(s) 1204
NmuCI GTSAC 1 cut(s) 441
PagI TCATGA 1 cut(s) 1891
PctI GAATGC 1 cut(s) 2000
PdmI GAANNNNTTC 2 cut(s) 1852, 1945
PfeI GAWTC 4 cut(s) 859, 877, 1622, 2053
PflMI CCANNNNNTGG 1 cut(s) 270
PkrI GCNGC 6 cut(s) 87, 598, 962, 1762, 1765, 1768
PshBI ATTAAT 3 cut(s) 225, 453, 1404
PsiI TTATAA 1 cut(s) 525
Psp6I CCWGG 2 cut(s) 978, 1009
PspFI CCCAGC 1 cut(s) 547
PspGI CCWGG 2 cut(s) 978, 1009
PspN4I GGNNCC 1 cut(s) 1204
PspPI GGNCC 4 cut(s) 1203, 1292, 1436, 1598
PstNI CAGNNNCTG 1 cut(s) 1766
PvuII CAGCTG 1 cut(s) 1763
RsaI GTAC 2 cut(s) 1168, 1227
RsaNI GTAC 2 cut(s) 1167, 1226
SatI GCNGC 6 cut(s) 86, 597, 961, 1761, 1764, 1767
Sau3AI GATC 1 cut(s) 1512
Sau96I GGNCC 4 cut(s) 1203, 1292, 1436, 1598
ScrFI CCNGG 3 cut(s) 685, 980, 1011
SfaNI GCATC 5 cut(s) 211, 751, 1558, 1630, 2106
SinI GGWCC 2 cut(s) 1203, 1292
SmlI CTYRAG 4 cut(s) 722, 955, 1247, 1544
SmoI CTYRAG 4 cut(s) 722, 955, 1247, 1544
SsiI CCGC 3 cut(s) 597, 1596, 1650
SspI AATATT 1 cut(s) 513
StyD4I CCNGG 3 cut(s) 683, 978, 1009
StyI CCWWGG 5 cut(s) 586, 831, 1413, 1576, 1841
TaaI ACNGT 3 cut(s) 251, 270, 429
TaiI ACGT 1 cut(s) 1671
TaqI TCGA 4 cut(s) 209, 743, 1311, 2133
TauI GCSGC 1 cut(s) 599
TfiI GAWTC 4 cut(s) 859, 877, 1622, 2053
TseFI GTSAC 1 cut(s) 441
TseI GCWGC 5 cut(s) 85, 960, 1760, 1763, 1766
Tsp45I GTSAC 1 cut(s) 441
TspDTI ATGAA 7 cut(s) 365, 680, 1101, 1440, 1614, 1880, 2097
TspGWI ACGGA 2 cut(s) 308, 2033
Van91I CCANNNNNTGG 1 cut(s) 270
Vha464I CTTAAG 1 cut(s) 1247
VpaK11BI GGWCC 2 cut(s) 1203, 1292
VspI ATTAAT 3 cut(s) 225, 453, 1404
XapI RAATTY 6 cut(s) 21, 581, 814, 1475, 1555, 1584
XcmI CCANNNNNNNNNTGG 1 cut(s) 1236
XmiI GTMKAC 1 cut(s) 1932
XmnI GAANNNNTTC 2 cut(s) 1852, 1945
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.