Rw2G019110

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
25044031 .. 25046328
2298 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G019110.1

Sequence Viewer

Length: 1446 bp
ATGAGTGATAACACATTGCAAGGATACATTCCAGATGAACTTTGTCAACTAGAACACTTAAATGCTTTGTCTATCTTAGCACATAACAATCTAGAAGGCCCTATTCCTAGTTCCTTTGCTACCTGCTTAAGCTTAGAACTGTTGGATTTATCTCGAAATAGTTTCACTGGAGTGATTCCAAAGTCTCTAGAAGCACTCTCACATCTCAAGCATCTGAATTTGTCTTTCAACAGACTCCAAGGAGAAATTCCAAGTGGCGGTCCTTTCAAAAACTTCTCTGCTGAATCATTTGTTTCAAACCATGGACTCTGTGGTGGATCCCAATTTCAAGTTCCACCATGCAAAAGAAAAGGACTCTGTAGCATATCTATCTTGAAGTATGTTATTTCGGGGATCTTGTCAGCAATGCTTCTAGCGGCCTCCATATTTTGGATGTTGATGTTACGCAGAAAAAAGAATGCAACAGCTGCAGCGCGTACTATCTTGACACCACAAGTTTTTTGGAGAAGAGTTTCATACCTAGAGCTCCTACATGCGACAGATGGATTCAATGAAAGCAACTTACTTGGTACTGGGGGTTTTGGCTCAGTATATAAAGGAACATTGTCAGATGGGATAGACGTTGCGATAAAGGTTTTCAAATTGGAGTTAGAAGGGGCATTTACAAGTTTTGAGGTTGAATGTGAAGTGCTAAGTAATGTTCGTCACCGAAATCTTGTCAAAGTCATCAGTTGCTGTAGTCAAATTGATTTCAAAGGTCTTGTATTGAATTACATGCCTAATGGGAGCCTTGAGAAGTGGTTGTACTCTCAGGATCCTTCTTTGGACATAATGCAGAGGTTGGATATAATGATAGATGTTGCATCGGCATTGGAGTACCTTCACCATGATTATGAAGTACCTATTGTCCATTGTGATTTGAAGCCAAGCAACATCCTACTAGATGATGATATGGTTGCACGTGTTGCTGATTTTGGTATTGCAAAACTTTTGGGTGGAGGAGATTCTATGACTCAAACCATGACCTTGGCCACAATTGGGTATATGGCTCCAGAGTATGGAATGCAAGGAATAGTGACCAGAAGAGGTGATGTGTATAGTTTTGGTATTGTAGTGATGGAAACATTCACAAGAAGGAAGCCAACCGATGAGATCTTCGCTGGGGAAATGAGACTAAATCAATGGGTTGCAAATTTCCTAGTTGCAGATGTGATAGTTGAACTTGTGGATGCTAGTTTACTTGGAAACGAGGAGGCTCATGACTTCGTGAGCAAGAGGGACTGCTTATCATCCATTATGAGATTAGCTGTTGCTTGTTCAGCAGAATCACCGGAAGAGAGGATAAACATGCAAGAGGCTGTAGCCATGCTTAAAACAATCAAGATCAAGTTTTCAAAGGACTCTGCTGCAAGAGGTGTGGTGGTGAACCGTCGTCCTGTTTCGTAA

Protein Analysis

481

Amino Acids

53.09

Weight (kDa)

5.82

Isoelectric Point (pI)

33.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 26 - 79 3.3e-09 Leucine rich repeat
Pkinase PF00069 184 - 455 1.7e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 187 - 456 4.2e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 131
AccB7I CCANNNNNTGG 2 cut(s) 429, 1058
AccII CGCG 1 cut(s) 475
AciI CCGC 2 cut(s) 258, 416
AclWI GGATC 5 cut(s) 312, 325, 401, 809, 822
AcoI YGGCCR 1 cut(s) 1029
AcsI RAATTY 3 cut(s) 217, 246, 1192
AcvI CACGTG 1 cut(s) 962
AfaI GTAC 5 cut(s) 478, 571, 806, 878, 900
AfiI CCNNNNNNNGG 4 cut(s) 257, 429, 1038, 1058
AflII CTTAAG 1 cut(s) 127
AflIII ACRYGT 1 cut(s) 961
AjuI GAANNNNNNNTTGG 4 cut(s) 231, 263, 315, 347
AleI CACNNNNGTG 1 cut(s) 170
AluBI AGCT 4 cut(s) 132, 467, 526, 1307
AluI AGCT 4 cut(s) 132, 467, 526, 1307
Alw21I GWGCWC 1 cut(s) 528
Alw26I GTCTC 2 cut(s) 189, 1165
AlwI GGATC 5 cut(s) 312, 325, 401, 809, 822
AlwNI CAGNNNCTG 1 cut(s) 735
AoxI GGCC 3 cut(s) 97, 417, 1029
ApeKI GCWGC 3 cut(s) 467, 470, 1406
ApoI RAATTY 3 cut(s) 217, 246, 1192
Asp700I GAANNNNTTC 1 cut(s) 511
AspLEI GCGC 1 cut(s) 475
AspS9I GGNCC 2 cut(s) 98, 260
AsuHPI GGTGA 5 cut(s) 698, 875, 1100, 1320, 1435
AvaII GGWCC 1 cut(s) 260
BalI TGGCCA 1 cut(s) 1031
BamHI GGATCC 2 cut(s) 317, 814
BanII GRGCYC 1 cut(s) 528
BarI GAAGNNNNNNTAC 2 cut(s) 788, 820
BbrPI CACGTG 1 cut(s) 962
Bbv12I GWGCWC 1 cut(s) 528
BbvI GCAGC 3 cut(s) 454, 482, 1393
BccI CCATC 3 cut(s) 536, 605, 1111
BciVI GTATCC 1 cut(s) 17
BcoDI GTCTC 2 cut(s) 189, 1165
BfaI CTAG 9 cut(s) 50, 92, 108, 188, 413, 521, 941, 1199, 1233
BfmI CTRYAG 4 cut(s) 358, 468, 736, 1359
BfrI CTTAAG 1 cut(s) 127
BfuAI ACCTGC 1 cut(s) 131
BfuI GTATCC 1 cut(s) 17
BglII AGATCT 1 cut(s) 1152
BisI GCNGC 4 cut(s) 417, 468, 471, 1407
BlsI GCNGC 4 cut(s) 418, 469, 472, 1408
Bme18I GGWCC 1 cut(s) 260
BmgT120I GGNCC 2 cut(s) 98, 260
BmiI GGNNCC 4 cut(s) 319, 788, 816, 1050
BmrI ACTGGG 1 cut(s) 582
BmsI GCATC 3 cut(s) 220, 872, 1219
BmuI ACTGGG 1 cut(s) 582
BpmI CTGGAG 2 cut(s) 189, 1035
BpuEI CTTGAG 2 cut(s) 191, 812
BsaAI YACGTR 1 cut(s) 962
BsaJI CCNNGG 3 cut(s) 238, 301, 1026
BsaWI WCCGGW 1 cut(s) 1330
Bsc4I CCNNNNNNNGG 4 cut(s) 257, 429, 1038, 1058
Bse1I ACTGG 2 cut(s) 172, 577
Bse3DI GCAATG 2 cut(s) 14, 411
BseDI CCNNGG 3 cut(s) 238, 301, 1026
BseGI GGATG 4 cut(s) 438, 933, 1234, 1289
BseLI CCNNNNNNNGG 4 cut(s) 257, 429, 1038, 1058
BseMI GCAATG 2 cut(s) 14, 411
BseMII CTCAG 2 cut(s) 600, 824
BseNI ACTGG 2 cut(s) 172, 577
BseRI GAGGAG 2 cut(s) 1014, 1265
BseXI GCAGC 3 cut(s) 454, 482, 1393
BseYI CCCAGC 1 cut(s) 1160
Bsh1236I CGCG 1 cut(s) 475
BshFI GGCC 3 cut(s) 99, 419, 1031
BsiHKAI GWGCWC 1 cut(s) 528
BsiSI CCGG 1 cut(s) 1331
BslFI GGGAC 1 cut(s) 1292
BslI CCNNNNNNNGG 4 cut(s) 257, 429, 1038, 1058
BsmAI GTCTC 2 cut(s) 189, 1165
BsmFI GGGAC 1 cut(s) 1292
BsmI GAATGC 2 cut(s) 463, 1068
BsnI GGCC 3 cut(s) 99, 419, 1031
Bsp1286I GDGCHC 1 cut(s) 528
Bsp143I GATC 5 cut(s) 317, 393, 814, 1152, 1383
Bsp19I CCATGG 1 cut(s) 301
BspACI CCGC 2 cut(s) 258, 416
BspANI GGCC 3 cut(s) 99, 419, 1031
BspCNI CTCAG 2 cut(s) 599, 823
BspFNI CGCG 1 cut(s) 475
BspHI TCATGA 1 cut(s) 1258
BspLI GGNNCC 4 cut(s) 319, 788, 816, 1050
BspMAI CTGCAG 1 cut(s) 472
BspMI ACCTGC 1 cut(s) 131
BspPI GGATC 5 cut(s) 312, 325, 401, 809, 822
BspTI CTTAAG 1 cut(s) 127
BsrDI GCAATG 2 cut(s) 14, 411
BsrI ACTGG 2 cut(s) 172, 577
BssECI CCNNGG 3 cut(s) 238, 301, 1026
BssMI GATC 5 cut(s) 317, 393, 814, 1152, 1383
BssT1I CCWWGG 3 cut(s) 238, 301, 1026
Bst4CI ACNGT 2 cut(s) 141, 1430
Bst6I CTCTTC 3 cut(s) 502, 1078, 1329
BstAFI CTTAAG 1 cut(s) 127
BstAPI GCANNNNNTGC 2 cut(s) 467, 965
BstBAI YACGTR 1 cut(s) 962
BstDEI CTNAG 5 cut(s) 76, 133, 586, 692, 810
BstDSI CCRYGG 1 cut(s) 301
BstF5I GGATG 4 cut(s) 438, 933, 1234, 1289
BstFNI CGCG 1 cut(s) 475
BstHHI GCGC 1 cut(s) 475
BstKTI GATC 5 cut(s) 320, 396, 817, 1155, 1386
BstMAI GTCTC 2 cut(s) 189, 1165
BstMBI GATC 5 cut(s) 317, 393, 814, 1152, 1383
BstMWI GCNNNNNNNGC 3 cut(s) 467, 965, 1319
BstNSI RCATGY 3 cut(s) 536, 778, 1351
BstSFI CTRYAG 4 cut(s) 358, 468, 736, 1359
BstUI CGCG 1 cut(s) 475
BstV1I GCAGC 3 cut(s) 454, 482, 1393
BstX2I RGATCY 4 cut(s) 317, 393, 814, 1152
BstXI CCANNNNNNTGG 1 cut(s) 1027
BstYI RGATCY 4 cut(s) 317, 393, 814, 1152
BsuI GTATCC 1 cut(s) 17
BsuRI GGCC 3 cut(s) 99, 419, 1031
BtgI CCRYGG 1 cut(s) 301
BtsCI GGATG 4 cut(s) 438, 933, 1234, 1289
BtsIMutI CAGTG 1 cut(s) 165
BveI ACCTGC 1 cut(s) 131
CaiI CAGNNNCTG 1 cut(s) 735
CciI TCATGA 1 cut(s) 1258
CfoI GCGC 1 cut(s) 475
Cfr13I GGNCC 2 cut(s) 98, 260
Csp6I GTAC 5 cut(s) 477, 570, 805, 877, 899
CspCI CAANNNNNGTGG 2 cut(s) 1398, 1433
CviAII CATG 9 cut(s) 302, 339, 533, 775, 887, 1021, 1259, 1348, 1366
CviQI GTAC 5 cut(s) 477, 570, 805, 877, 899
DdeI CTNAG 5 cut(s) 76, 133, 586, 692, 810
DpnI GATC 5 cut(s) 319, 395, 816, 1154, 1385
DpnII GATC 5 cut(s) 317, 393, 814, 1152, 1383
EaeI YGGCCR 1 cut(s) 1029
Eam1104I CTCTTC 3 cut(s) 502, 1078, 1329
EarI CTCTTC 3 cut(s) 502, 1078, 1329
Ecl136II GAGCTC 1 cut(s) 526
Eco130I CCWWGG 3 cut(s) 238, 301, 1026
Eco24I GRGCYC 1 cut(s) 528
Eco47I GGWCC 1 cut(s) 260
Eco53kI GAGCTC 1 cut(s) 526
Eco72I CACGTG 1 cut(s) 962
EcoICRI GAGCTC 1 cut(s) 526
EcoO109I RGGNCCY 1 cut(s) 98
EcoT14I CCWWGG 3 cut(s) 238, 301, 1026
EcoT38I GRGCYC 1 cut(s) 528
ErhI CCWWGG 3 cut(s) 238, 301, 1026
FaeI CATG 9 cut(s) 305, 342, 536, 778, 890, 1024, 1262, 1351, 1369
FaqI GGGAC 1 cut(s) 1292
FatI CATG 9 cut(s) 301, 338, 532, 774, 886, 1020, 1258, 1347, 1365
Fnu4HI GCNGC 4 cut(s) 417, 468, 471, 1407
FokI GGATG 4 cut(s) 445, 920, 1241, 1276
FriOI GRGCYC 1 cut(s) 528
Fsp4HI GCNGC 4 cut(s) 417, 468, 471, 1407
FspBI CTAG 9 cut(s) 50, 92, 108, 188, 413, 521, 941, 1199, 1233
GlaI GCGC 1 cut(s) 474
GluI GCNGC 4 cut(s) 417, 468, 471, 1407
GsaI CCCAGC 1 cut(s) 1164
GsuI CTGGAG 2 cut(s) 189, 1035
HaeIII GGCC 3 cut(s) 99, 419, 1031
HapII CCGG 1 cut(s) 1331
HhaI GCGC 1 cut(s) 475
Hin1II CATG 9 cut(s) 305, 342, 536, 778, 890, 1024, 1262, 1351, 1369
Hin6I GCGC 1 cut(s) 473
HinP1I GCGC 1 cut(s) 473
HincII GTYRAC 1 cut(s) 47
HindII GTYRAC 1 cut(s) 47
HindIII AAGCTT 1 cut(s) 130
HpaII CCGG 1 cut(s) 1331
HphI GGTGA 5 cut(s) 698, 875, 1100, 1320, 1435
Hpy166II GTNNAC 3 cut(s) 47, 1238, 1426
Hpy188I TCNGA 2 cut(s) 216, 610
Hpy8I GTNNAC 3 cut(s) 47, 1238, 1426
Hpy99I CGWCG 1 cut(s) 1434
HpyAV CCTTC 5 cut(s) 89, 647, 828, 890, 1128
HpyCH4III ACNGT 2 cut(s) 141, 1430
HpyCH4IV ACGT 2 cut(s) 621, 961
HpyF10VI GCNNNNNNNGC 3 cut(s) 467, 965, 1319
HpyF3I CTNAG 5 cut(s) 76, 133, 586, 692, 810
HpySE526I ACGT 2 cut(s) 621, 961
Hsp92II CATG 9 cut(s) 305, 342, 536, 778, 890, 1024, 1262, 1351, 1369
HspAI GCGC 1 cut(s) 473
Kzo9I GATC 5 cut(s) 317, 393, 814, 1152, 1383
LmnI GCTCC 3 cut(s) 531, 786, 1054
LpnPI CCDG 9 cut(s) 45, 136, 153, 558, 797, 1065, 1093, 1146, 1344
Lsp1109I GCAGC 3 cut(s) 454, 482, 1393
LweI GCATC 3 cut(s) 220, 872, 1219
MaeI CTAG 9 cut(s) 50, 92, 108, 188, 413, 521, 941, 1199, 1233
MaeII ACGT 2 cut(s) 621, 961
MaeIII GTNAC 3 cut(s) 441, 704, 1075
MalI GATC 5 cut(s) 319, 395, 816, 1154, 1385
MboI GATC 5 cut(s) 317, 393, 814, 1152, 1383
MboII GAAGA 4 cut(s) 519, 1095, 1147, 1346
MfeI CAATTG 1 cut(s) 1035
MflI RGATCY 4 cut(s) 317, 393, 814, 1152
MhlI GDGCHC 1 cut(s) 528
MlsI TGGCCA 1 cut(s) 1031
MluCI AATT 8 cut(s) 217, 246, 323, 641, 744, 769, 1035, 1192
MluNI TGGCCA 1 cut(s) 1031
MlyI GAGTC 5 cut(s) 228, 300, 348, 1006, 1394
MmeI TCCRAC 2 cut(s) 123, 822
Mox20I TGGCCA 1 cut(s) 1031
MroXI GAANNNNTTC 1 cut(s) 511
MscI TGGCCA 1 cut(s) 1031
MseI TTAA 3 cut(s) 59, 128, 1371
MslI CAYNNNNRTG 3 cut(s) 60, 170, 891
Msp20I TGGCCA 1 cut(s) 1031
MspA1I CMGCKG 1 cut(s) 467
MspCI CTTAAG 1 cut(s) 127
MspI CCGG 1 cut(s) 1331
MunI CAATTG 1 cut(s) 1035
Mva1269I GAATGC 2 cut(s) 463, 1068
MvnI CGCG 1 cut(s) 475
MwoI GCNNNNNNNGC 3 cut(s) 467, 965, 1319
NcoI CCATGG 1 cut(s) 301
NdeII GATC 5 cut(s) 317, 393, 814, 1152, 1383
NlaIII CATG 9 cut(s) 305, 342, 536, 778, 890, 1024, 1262, 1351, 1369
NlaIV GGNNCC 4 cut(s) 319, 788, 816, 1050
NmuCI GTSAC 2 cut(s) 704, 1075
NspI RCATGY 3 cut(s) 536, 778, 1351
OliI CACNNNNGTG 1 cut(s) 170
PagI TCATGA 1 cut(s) 1258
PctI GAATGC 2 cut(s) 463, 1068
PdmI GAANNNNTTC 1 cut(s) 511
PfeI GAWTC 5 cut(s) 175, 284, 546, 1004, 1325
PflMI CCANNNNNTGG 2 cut(s) 429, 1058
PkrI GCNGC 4 cut(s) 418, 469, 472, 1408
PleI GAGTC 5 cut(s) 228, 300, 348, 1006, 1394
PmaCI CACGTG 1 cut(s) 962
PmlI CACGTG 1 cut(s) 962
PpsI GAGTC 5 cut(s) 228, 300, 348, 1006, 1394
Ppu21I YACGTR 1 cut(s) 962
Psp124BI GAGCTC 1 cut(s) 528
PspCI CACGTG 1 cut(s) 962
PspFI CCCAGC 1 cut(s) 1160
PspN4I GGNNCC 4 cut(s) 319, 788, 816, 1050
PspPI GGNCC 2 cut(s) 98, 260
PstI CTGCAG 1 cut(s) 472
PstNI CAGNNNCTG 1 cut(s) 735
PsuI RGATCY 4 cut(s) 317, 393, 814, 1152
PvuII CAGCTG 1 cut(s) 467
RsaI GTAC 5 cut(s) 478, 571, 806, 878, 900
RsaNI GTAC 5 cut(s) 477, 570, 805, 877, 899
RseI CAYNNNNRTG 3 cut(s) 60, 170, 891
SacI GAGCTC 1 cut(s) 528
SaqAI TTAA 3 cut(s) 59, 128, 1371
SatI GCNGC 4 cut(s) 417, 468, 471, 1407
Sau3AI GATC 5 cut(s) 317, 393, 814, 1152, 1383
Sau96I GGNCC 2 cut(s) 98, 260
SchI GAGTC 5 cut(s) 228, 300, 348, 1006, 1394
SduI GDGCHC 1 cut(s) 528
SfaNI GCATC 3 cut(s) 220, 872, 1219
SfcI CTRYAG 4 cut(s) 358, 468, 736, 1359
SinI GGWCC 1 cut(s) 260
SmiMI CAYNNNNRTG 3 cut(s) 60, 170, 891
SmlI CTYRAG 3 cut(s) 127, 206, 791
SmoI CTYRAG 3 cut(s) 127, 206, 791
Sse9I AATT 8 cut(s) 217, 246, 323, 641, 744, 769, 1035, 1192
SsiI CCGC 2 cut(s) 258, 416
SspMI CTAG 9 cut(s) 50, 92, 108, 188, 413, 521, 941, 1199, 1233
SstI GAGCTC 1 cut(s) 528
StyI CCWWGG 3 cut(s) 238, 301, 1026
TaaI ACNGT 2 cut(s) 141, 1430
TaiI ACGT 2 cut(s) 624, 964
TaqI TCGA 1 cut(s) 154
TasI AATT 8 cut(s) 217, 246, 323, 641, 744, 769, 1035, 1192
TatI WGTACW 1 cut(s) 804
TauI GCSGC 1 cut(s) 419
TfiI GAWTC 5 cut(s) 175, 284, 546, 1004, 1325
Tru1I TTAA 3 cut(s) 59, 128, 1371
Tru9I TTAA 3 cut(s) 59, 128, 1371
TscAI CASTG 1 cut(s) 172
TseFI GTSAC 2 cut(s) 704, 1075
TseI GCWGC 3 cut(s) 467, 470, 1406
Tsp45I GTSAC 2 cut(s) 704, 1075
TspDTI ATGAA 4 cut(s) 51, 504, 567, 909
TspRI CASTG 1 cut(s) 172
Van91I CCANNNNNTGG 2 cut(s) 429, 1058
Vha464I CTTAAG 1 cut(s) 127
VpaK11BI GGWCC 1 cut(s) 260
XapI RAATTY 3 cut(s) 217, 246, 1192
XbaI TCTAGA 2 cut(s) 91, 187
XceI RCATGY 3 cut(s) 536, 778, 1351
XcmI CCANNNNNNNNNTGG 2 cut(s) 308, 498
XmnI GAANNNNTTC 1 cut(s) 511
XspI CTAG 9 cut(s) 50, 92, 108, 188, 413, 521, 941, 1199, 1233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.