RchiOBHm_Chr5g0059161

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000058
Physical Location & Seq
Forward (+)
64046458 .. 64049019
2562 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ33576

Sequence Viewer

Length: 2562 bp
ATGGCAGGTACTATACCACCAGAGATAAGTCATCTTCCAAATTTAAATGAATTGGGCCTCGGTGTTAATAATCTCAATGGCATCATCCCACTCTCAATCTTCAATATGTCCACATTGAGAATAATGAGGCTTGTCAGTAATCAGCTCTCAGGCAGGCTTCCAACAAACATAGGCCTTGGGCTTCCAAACGTACAAAGTCTCTTTCTAGGAGATAATAAACTGAGTGGAGTGGTCCCCAAATCCATCTCCAATATTTCAGAGATCATAACATTAGACCTGATCGATAACTCCTTTTCTGGCTTTATTCCTAGCCAGCTTTGTGCCTTAACAAAGCTTCAGCTACTTAAATTAGGCTGGAATAATTTGACAATTGATTCTTCTACTCAACAAGATAATCTGCTCTCTTGTTTGGCCAATCTTAGATATTTGACGGAATTAACCTTATCAGACAATCCATTAAATGCCAACCTTCCCATTTCCTTTAGGAATCTGTCTATATCCCTTCAAATTATTAGATTAGGTCAATGCAACATGAGAGGTAACATTCCCAATGATATTGGCAACTTGAGCAGCTTGATCCGCCTAGAATTGGAAAACAATCAATTGAGTGGACCAATTCCAACCTCAGTGGGAGGACTACAGAATCTCCAAGGTATGTACTTGAGTTATAACAAATTCCAAGGACACATCCTGGATGAACTTTGTCAGCTGGAAAACCTAAATGCATTACTTTTGGGTGGTAATCAACTTATTGGTTCCATACCTTCATGCTTGGGCAATTTAACCAAAGCTCTAAGATTTCTATCTCTAAGTTTCAATCTGTTGAATTCCACAATACCATCTACCTTGTGGGCACTCACTGATATCTTGAATTTAAACTTGTCATCCAATTCCCTAACTGGACGTCTCTCAGATCGTATTGATAATTTGAAGGTTGTGGAGGTCATAGACTTATCAAACAACCAATTATCCGATAGTATACCAAGCACCATTGGGGGTCTCCAAGCATTGATGTGGCTCTTCTTGAAAAATAATGGTTTTGAAGGTCCTATTCCTAGTTCATTTGGCGAGTTGCTAAGCCTGGAAATCTGTGATCTATCGAAGAACAATATGTCAGGAATAATTCCAAAGTCTCTTGAAGCCCTCTCATATCTCCGGTATCTAAATCTTTCTTTCAACAGACTCCAAGGGGAAATTCCAACAGGTGGAACTTTCTTGAACCTCTCTGACCAATCATTTTTATCAAATGAAGGACTATGTGGTGCACCACGATTTCATGTTCCATCATGCAAAAGGAAAGGTGAAAGATCTATCCTCCTGGGGTTGAAATATATTATTCCAGGGATCATATCAGCACTACTCCTAGTGTCCCTTGTATTGATTTTGATCTTACGCAGAAAAAGAAAGGCAGAAGTTGCAAGGGAGACTACATTATCACCTCAACTTCAAGAGGATACCTTGTTTCCTCAACTTCAAGAGTCTACCTTGTTACCTCAACGGAAGTGGAGGAGAGTATCATACCAAGAACTTCTAAGTGCGACCAATCGATTCGATGAATGCAACTTACTGGGCACTGGGGCTTTTGGCACGGTGTATAGAGGAACACTTTCAGATGGGATAAATGTTGCCATCAAGGTTTTTAAGCTCGAGTTGGAGAGGGCATTTAGAAGTTTTGAGCTTGAATGTGAAGTCCTAAGCAACATTTGTCACCGAAATCTTATCAAAGTCATCAGTTGCTGCAGTCAAATTGATTTCAAAGCCATTATATTGGATTACATGCCTAATGGGAGCCTTGAGAAGTGGTTGTACTCTCCCAACTTTTCTTTTAACGTCCTGCAGAGGTTGAACATAATGATTGATGTTGCATCGGCATTTCAGTACCTTCATCACGGTTATGATACACCTATTGTCCATTGCGATTTGAAGCCAAGCAACATCCTACTAGATGATGATATGGTTGCATATGTTTCTGATTTTGGCATTGCAAAAGTCCTAGGTGGAGAAGATTCCATGACTCAAACCCTGACCTTAGCCACAGTTGGGTATATAGCGCCAGGTGATGTATTTGTTCTAGTTTATAACTTTATTATTCTTTCAATTTTGTATATGTTGTCCTTATTCAACGAATTTTTTTTTTCTCTTTTCAATTATATGCATGCAGAGTACGGATTGGAAGGAATAGTCACCAGAAGAGGGGATGTGTACAGTTTTGGTATTCTTCTTTTGGAAACATTCACAAAGAGAAAGCCAACAGATGAGATGTTTGATGGGGAGATGAGTCTAAAGCAATGGGTTGAAAATGCACTATTAGCAGATGCAATAGTTGAAGTTGTTGATGTCACTTTACTTGGGATTGAGGAAGATCATGCTTTTGTGAGCAAGAGGGAGTGTATATCAGCCATTATGAGATTAGCTCTTGCTTGTTGTGCAGAATCACCGGAAGAGAGGATAAATATGCAAGAGGCTCTAGCCGCTCTTGACAAAATCAGGAACAAGTTTTTGATGGATGCCGCAGGAGGTGTGGTGAAGAAGCAACATTTTGTTCGGCAGCCTATTGATTGA

Protein Analysis

853

Amino Acids

94.6

Weight (kDa)

5.4

Isoelectric Point (pI)

42.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 62 - 122 9.4e-07 Leucine rich repeat
LRR_8 PF13855 352 - 395 3.1e-06 Leucine rich repeat
Pkinase PF00069 520 - 685 1e-28 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 522 - 685 1.8e-28 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 669, 2079
AatII GACGTC 1 cut(s) 907
AccB7I CCANNNNNTGG 1 cut(s) 1205
AccBSI CCGCTC 1 cut(s) 2474
AccI GTMKAC 2 cut(s) 979, 1481
AciI CCGC 3 cut(s) 580, 2472, 2511
AclWI GGATC 2 cut(s) 571, 1352
AcoI YGGCCR 1 cut(s) 411
AcsI RAATTY 6 cut(s) 40, 674, 826, 871, 1194, 2126
AcuI CTGAAG 1 cut(s) 320
AcyI GRCGYC 1 cut(s) 904
AfaI GTAC 7 cut(s) 10, 192, 659, 1808, 1880, 2165, 2204
AfiI CCNNNNNNNGG 4 cut(s) 589, 1205, 2040, 2193
AjnI CCWGG 5 cut(s) 690, 1080, 1317, 1339, 2053
AjuI GAANNNNNNNTTGG 2 cut(s) 1179, 1211
Alw21I GWGCWC 1 cut(s) 1267
Alw26I GTCTC 5 cut(s) 203, 911, 1004, 1137, 1418
Alw44I GTGCAC 1 cut(s) 1263
AlwI GGATC 2 cut(s) 571, 1352
AlwNI CAGNNNCTG 1 cut(s) 1737
Ama87I CYCGRG 1 cut(s) 1646
AoxI GGCC 3 cut(s) 55, 172, 411
ApaLI GTGCAC 1 cut(s) 1263
ApeKI GCWGC 3 cut(s) 570, 1737, 2548
ApoI RAATTY 6 cut(s) 40, 674, 826, 871, 1194, 2126
Asp700I GAANNNNTTC 1 cut(s) 1606
AspA2I CCTAGG 1 cut(s) 1993
AspLEI GCGC 1 cut(s) 2053
AspS9I GGNCC 4 cut(s) 55, 232, 611, 1046
AsuHPI GGTGA 7 cut(s) 1313, 1428, 1700, 2069, 2176, 2427, 2536
AvaI CYCGRG 1 cut(s) 1646
AvaII GGWCC 3 cut(s) 232, 611, 1046
AvrII CCTAGG 1 cut(s) 1993
BaeGI GKGCMC 3 cut(s) 856, 1267, 1574
BalI TGGCCA 1 cut(s) 413
BarI GAAGNNNNNNTAC 2 cut(s) 1790, 1822
Bbv12I GWGCWC 1 cut(s) 1267
BbvI GCAGC 2 cut(s) 582, 1724
BccI CCATC 7 cut(s) 251, 847, 1291, 1607, 1637, 2261, 2497
BciT130I CCWGG 5 cut(s) 692, 1082, 1319, 1341, 2055
BciVI GTATCC 1 cut(s) 1447
BcoDI GTCTC 5 cut(s) 203, 911, 1004, 1137, 1418
BfaI CTAG 9 cut(s) 206, 309, 584, 1056, 1364, 1943, 1994, 2072, 2468
BfmI CTRYAG 3 cut(s) 638, 1738, 1835
BfoI RGCGCY 1 cut(s) 2054
BfuI GTATCC 1 cut(s) 1447
BglII AGATCT 1 cut(s) 1307
BisI GCNGC 5 cut(s) 571, 1738, 2472, 2511, 2549
BlnI CCTAGG 1 cut(s) 1993
BlpI GCTNAGC 1 cut(s) 1076
BlsI GCNGC 5 cut(s) 572, 1739, 2473, 2512, 2550
Bme1390I CCNGG 5 cut(s) 692, 1082, 1319, 1341, 2055
Bme18I GGWCC 3 cut(s) 232, 611, 1046
BmeT110I CYCGRG 1 cut(s) 1646
BmgT120I GGNCC 4 cut(s) 55, 232, 611, 1046
BmiI GGNNCC 3 cut(s) 234, 757, 1790
BmrFI CCNGG 5 cut(s) 692, 1082, 1319, 1341, 2055
BmrI ACTGGG 2 cut(s) 1577, 1584
BmsI GCATC 4 cut(s) 90, 1874, 2305, 2497
BmuI ACTGGG 2 cut(s) 1577, 1584
BplI GAGNNNNNCTC 2 cut(s) 2398, 2430
Bpu10I CCTNAGC 2 cut(s) 1694, 2029
Bpu1102I GCTNAGC 1 cut(s) 1076
BpuEI CTTGAG 3 cut(s) 586, 682, 1814
Bsa29I ATCGAT 2 cut(s) 282, 1546
BsaBI GATNNNNATC 2 cut(s) 802, 1385
BsaHI GRCGYC 1 cut(s) 904
BsaI GGTCTC 1 cut(s) 1004
BsaJI CCNNGG 8 cut(s) 58, 175, 649, 679, 1186, 1318, 1340, 1993
BsaWI WCCGGW 2 cut(s) 1155, 2437
BsaXI ACNNNNNCTCC 4 cut(s) 630, 660, 2508, 2538
Bsc4I CCNNNNNNNGG 4 cut(s) 589, 1205, 2040, 2193
Bse1I ACTGG 3 cut(s) 904, 1572, 1579
Bse3DI GCAATG 3 cut(s) 1912, 1980, 2294
Bse8I GATNNNNATC 2 cut(s) 802, 1385
BseBI CCWGG 5 cut(s) 692, 1082, 1319, 1341, 2055
BseCI ATCGAT 2 cut(s) 282, 1546
BseDI CCNNGG 8 cut(s) 58, 175, 649, 679, 1186, 1318, 1340, 1993
BseGI GGATG 7 cut(s) 84, 687, 700, 884, 1935, 2203, 2512
BseJI GATNNNNATC 2 cut(s) 802, 1385
BseLI CCNNNNNNNGG 4 cut(s) 589, 1205, 2040, 2193
BseMI GCAATG 3 cut(s) 1912, 1980, 2294
BseMII CTCAG 4 cut(s) 162, 212, 639, 924
BseNI ACTGG 3 cut(s) 904, 1572, 1579
BseRI GAGGAG 1 cut(s) 1522
BseSI GKGCMC 3 cut(s) 856, 1267, 1574
BseXI GCAGC 2 cut(s) 582, 1724
BsgI GTGCAG 1 cut(s) 2448
BshFI GGCC 3 cut(s) 57, 174, 413
BshVI ATCGAT 2 cut(s) 282, 1546
BsiHKAI GWGCWC 1 cut(s) 1267
BsiHKCI CYCGRG 1 cut(s) 1646
BsiSI CCGG 2 cut(s) 1156, 2438
BslFI GGGAC 2 cut(s) 218, 1354
BslI CCNNNNNNNGG 4 cut(s) 589, 1205, 2040, 2193
BsmAI GTCTC 5 cut(s) 203, 911, 1004, 1137, 1418
BsmBI CGTCTC 1 cut(s) 911
BsmFI GGGAC 2 cut(s) 218, 1354
BsmI GAATGC 1 cut(s) 1562
BsnI GGCC 3 cut(s) 57, 174, 413
Bso31I GGTCTC 1 cut(s) 1004
BsoBI CYCGRG 1 cut(s) 1646
Bsp1286I GDGCHC 3 cut(s) 856, 1267, 1574
Bsp1407I TGTACA 1 cut(s) 2202
Bsp143I GATC 9 cut(s) 261, 279, 576, 913, 1093, 1307, 1344, 1386, 2362
Bsp1720I GCTNAGC 1 cut(s) 1076
BspACI CCGC 3 cut(s) 580, 2472, 2511
BspANI GGCC 3 cut(s) 57, 174, 413
BspCNI CTCAG 4 cut(s) 161, 213, 638, 923
BspDI ATCGAT 2 cut(s) 282, 1546
BspLI GGNNCC 3 cut(s) 234, 757, 1790
BspMAI CTGCAG 2 cut(s) 1742, 1839
BspPI GGATC 2 cut(s) 571, 1352
BspQI GCTCTTC 1 cut(s) 1025
BspTNI GGTCTC 1 cut(s) 1004
BsrBI CCGCTC 1 cut(s) 2474
BsrDI GCAATG 3 cut(s) 1912, 1980, 2294
BsrGI TGTACA 1 cut(s) 2202
BsrI ACTGG 3 cut(s) 904, 1572, 1579
BssECI CCNNGG 8 cut(s) 58, 175, 649, 679, 1186, 1318, 1340, 1993
BssMI GATC 9 cut(s) 261, 279, 576, 913, 1093, 1307, 1344, 1386, 2362
BssNAI GTATAC 1 cut(s) 980
BssNI GRCGYC 1 cut(s) 904
BssT1I CCWWGG 5 cut(s) 175, 649, 679, 1186, 1993
Bst1107I GTATAC 1 cut(s) 980
Bst2UI CCWGG 5 cut(s) 692, 1082, 1319, 1341, 2055
Bst4CI ACNGT 4 cut(s) 1591, 1892, 2038, 2207
Bst6I CTCTTC 3 cut(s) 1025, 2185, 2436
BstACI GRCGYC 1 cut(s) 904
BstAPI GCANNNNNTGC 1 cut(s) 1415
BstAUI TGTACA 1 cut(s) 2202
BstC8I GCNNGC 3 cut(s) 155, 314, 2157
BstF5I GGATG 7 cut(s) 84, 687, 700, 884, 1935, 2203, 2512
BstH2I RGCGCY 1 cut(s) 2054
BstHHI GCGC 1 cut(s) 2053
BstKTI GATC 9 cut(s) 264, 282, 579, 916, 1096, 1310, 1347, 1389, 2365
BstMAI GTCTC 5 cut(s) 203, 911, 1004, 1137, 1418
BstMBI GATC 9 cut(s) 261, 279, 576, 913, 1093, 1307, 1344, 1386, 2362
BstMWI GCNNNNNNNGC 6 cut(s) 567, 579, 1415, 2309, 2426, 2471
BstNI CCWGG 5 cut(s) 692, 1082, 1319, 1341, 2055
BstNSI RCATGY 2 cut(s) 1780, 2159
BstSCI CCNGG 5 cut(s) 690, 1080, 1317, 1339, 2053
BstSFI CTRYAG 3 cut(s) 638, 1738, 1835
BstSLI GKGCMC 3 cut(s) 856, 1267, 1574
BstV1I GCAGC 2 cut(s) 582, 1724
BstX2I RGATCY 1 cut(s) 1307
BstXI CCANNNNNNTGG 1 cut(s) 1768
BstYI RGATCY 1 cut(s) 1307
BstZ17I GTATAC 1 cut(s) 980
Bsu15I ATCGAT 2 cut(s) 282, 1546
BsuI GTATCC 1 cut(s) 1447
BsuRI GGCC 3 cut(s) 57, 174, 413
BsuTUI ATCGAT 2 cut(s) 282, 1546
BtsCI GGATG 7 cut(s) 84, 687, 700, 884, 1935, 2203, 2512
BtsIMutI CAGTG 3 cut(s) 633, 858, 1572
Cac8I GCNNGC 3 cut(s) 155, 314, 2157
CaiI CAGNNNCTG 1 cut(s) 1737
CfoI GCGC 1 cut(s) 2053
Cfr13I GGNCC 4 cut(s) 55, 232, 611, 1046
ClaI ATCGAT 2 cut(s) 282, 1546
Csp6I GTAC 7 cut(s) 9, 191, 658, 1807, 1879, 2164, 2203
CspCI CAANNNNNGTGG 4 cut(s) 609, 644, 1484, 1519
CviAII CATG 8 cut(s) 532, 768, 1277, 1287, 1777, 2011, 2156, 2366
CviQI GTAC 7 cut(s) 9, 191, 658, 1807, 1879, 2164, 2203
DpnI GATC 9 cut(s) 263, 281, 578, 915, 1095, 1309, 1346, 1388, 2364
DpnII GATC 9 cut(s) 261, 279, 576, 913, 1093, 1307, 1344, 1386, 2362
DraI TTTAAA 2 cut(s) 45, 876
EaeI YGGCCR 1 cut(s) 411
Eam1104I CTCTTC 3 cut(s) 1025, 2185, 2436
EarI CTCTTC 3 cut(s) 1025, 2185, 2436
EciI GGCGGA 1 cut(s) 569
Eco130I CCWWGG 5 cut(s) 175, 649, 679, 1186, 1993
Eco147I AGGCCT 1 cut(s) 174
Eco31I GGTCTC 1 cut(s) 1004
Eco32I GATATC 1 cut(s) 865
Eco47I GGWCC 3 cut(s) 232, 611, 1046
Eco57I CTGAAG 1 cut(s) 320
Eco88I CYCGRG 1 cut(s) 1646
EcoO109I RGGNCCY 1 cut(s) 1046
EcoRI GAATTC 1 cut(s) 826
EcoRII CCWGG 5 cut(s) 690, 1080, 1317, 1339, 2053
EcoRV GATATC 1 cut(s) 865
EcoT14I CCWWGG 5 cut(s) 175, 649, 679, 1186, 1993
EcoT22I ATGCAT 2 cut(s) 727, 2157
ErhI CCWWGG 5 cut(s) 175, 649, 679, 1186, 1993
Esp3I CGTCTC 1 cut(s) 911
FaeI CATG 8 cut(s) 535, 771, 1280, 1290, 1780, 2014, 2159, 2369
FaqI GGGAC 2 cut(s) 218, 1354
FatI CATG 8 cut(s) 531, 767, 1276, 1286, 1776, 2010, 2155, 2365
FauNDI CATATG 1 cut(s) 1963
FblI GTMKAC 2 cut(s) 979, 1481
Fnu4HI GCNGC 5 cut(s) 571, 1738, 2472, 2511, 2549
FokI GGATG 7 cut(s) 71, 674, 707, 871, 1922, 2210, 2519
Fsp4HI GCNGC 5 cut(s) 571, 1738, 2472, 2511, 2549
FspBI CTAG 9 cut(s) 206, 309, 584, 1056, 1364, 1943, 1994, 2072, 2468
GlaI GCGC 1 cut(s) 2052
GluI GCNGC 5 cut(s) 571, 1738, 2472, 2511, 2549
HaeII RGCGCY 1 cut(s) 2054
HaeIII GGCC 3 cut(s) 57, 174, 413
HapII CCGG 2 cut(s) 1156, 2438
HhaI GCGC 1 cut(s) 2053
Hin1I GRCGYC 1 cut(s) 904
Hin1II CATG 8 cut(s) 535, 771, 1280, 1290, 1780, 2014, 2159, 2369
Hin6I GCGC 1 cut(s) 2051
HinP1I GCGC 1 cut(s) 2051
HindIII AAGCTT 1 cut(s) 332
HpaII CCGG 2 cut(s) 1156, 2438
HphI GGTGA 7 cut(s) 1313, 1428, 1700, 2069, 2176, 2427, 2536
Hpy166II GTNNAC 6 cut(s) 111, 611, 980, 1265, 1482, 2203
Hpy188I TCNGA 7 cut(s) 259, 448, 913, 973, 1228, 1612, 1972
Hpy188III TCNNGA 9 cut(s) 868, 1024, 1116, 1136, 1216, 1448, 1475, 2477, 2488
Hpy8I GTNNAC 6 cut(s) 111, 611, 980, 1265, 1482, 2203
HpyAV CCTTC 8 cut(s) 479, 512, 774, 925, 1037, 1244, 1892, 2168
HpyCH4III ACNGT 4 cut(s) 1591, 1892, 2038, 2207
HpyCH4IV ACGT 3 cut(s) 189, 904, 1830
HpyF10VI GCNNNNNNNGC 6 cut(s) 567, 579, 1415, 2309, 2426, 2471
HpySE526I ACGT 3 cut(s) 189, 904, 1830
Hsp92I GRCGYC 1 cut(s) 904
Hsp92II CATG 8 cut(s) 535, 771, 1280, 1290, 1780, 2014, 2159, 2369
HspAI GCGC 1 cut(s) 2051
Kzo9I GATC 9 cut(s) 261, 279, 576, 913, 1093, 1307, 1344, 1386, 2362
LguI GCTCTTC 1 cut(s) 1025
LmnI GCTCC 1 cut(s) 1788
Lsp1109I GCAGC 2 cut(s) 582, 1724
LweI GCATC 4 cut(s) 90, 1874, 2305, 2497
MaeI CTAG 9 cut(s) 206, 309, 584, 1056, 1364, 1943, 1994, 2072, 2468
MaeII ACGT 3 cut(s) 189, 904, 1830
MaeIII GTNAC 5 cut(s) 539, 1488, 1706, 2182, 2338
MalI GATC 9 cut(s) 263, 281, 578, 915, 1095, 1309, 1346, 1388, 2364
MbiI CCGCTC 1 cut(s) 2474
MboI GATC 9 cut(s) 261, 279, 576, 913, 1093, 1307, 1344, 1386, 2362
MfeI CAATTG 2 cut(s) 369, 602
MflI RGATCY 1 cut(s) 1307
MhlI GDGCHC 3 cut(s) 856, 1267, 1574
MlsI TGGCCA 1 cut(s) 413
MluNI TGGCCA 1 cut(s) 413
MlyI GAGTC 4 cut(s) 1176, 1487, 2008, 2287
MmeI TCCRAC 4 cut(s) 185, 644, 1223, 1632
Mox20I TGGCCA 1 cut(s) 413
Mph1103I ATGCAT 2 cut(s) 727, 2157
MroXI GAANNNNTTC 1 cut(s) 1606
MscI TGGCCA 1 cut(s) 413
MslI CAYNNNNRTG 2 cut(s) 1012, 1893
Msp20I TGGCCA 1 cut(s) 413
MspA1I CMGCKG 1 cut(s) 709
MspI CCGG 2 cut(s) 1156, 2438
MspR9I CCNGG 5 cut(s) 692, 1082, 1319, 1341, 2055
MunI CAATTG 2 cut(s) 369, 602
Mva1269I GAATGC 1 cut(s) 1562
MvaI CCWGG 5 cut(s) 692, 1082, 1319, 1341, 2055
MwoI GCNNNNNNNGC 6 cut(s) 567, 579, 1415, 2309, 2426, 2471
NdeI CATATG 1 cut(s) 1963
NdeII GATC 9 cut(s) 261, 279, 576, 913, 1093, 1307, 1344, 1386, 2362
NlaIII CATG 8 cut(s) 535, 771, 1280, 1290, 1780, 2014, 2159, 2369
NlaIV GGNNCC 3 cut(s) 234, 757, 1790
NmuCI GTSAC 3 cut(s) 1706, 2182, 2338
NsiI ATGCAT 2 cut(s) 727, 2157
NspI RCATGY 2 cut(s) 1780, 2159
PaeI GCATGC 1 cut(s) 2159
PaeR7I CTCGAG 1 cut(s) 1646
PceI AGGCCT 1 cut(s) 174
PciSI GCTCTTC 1 cut(s) 1025
PctI GAATGC 1 cut(s) 1562
PdmI GAANNNNTTC 1 cut(s) 1606
PfeI GAWTC 6 cut(s) 374, 487, 643, 1548, 2006, 2432
PflMI CCANNNNNTGG 1 cut(s) 1205
PfoI TCCNGGA 1 cut(s) 690
PkrI GCNGC 5 cut(s) 572, 1739, 2473, 2512, 2550
PleI GAGTC 4 cut(s) 1176, 1486, 2008, 2286
PpsI GAGTC 4 cut(s) 1176, 1486, 2008, 2286
PpuMI RGGWCCY 1 cut(s) 1046
PsiI TTATAA 2 cut(s) 669, 2079
Psp5II RGGWCCY 1 cut(s) 1046
Psp6I CCWGG 5 cut(s) 690, 1080, 1317, 1339, 2053
PspGI CCWGG 5 cut(s) 690, 1080, 1317, 1339, 2053
PspN4I GGNNCC 3 cut(s) 234, 757, 1790
PspPI GGNCC 4 cut(s) 55, 232, 611, 1046
PspPPI RGGWCCY 1 cut(s) 1046
PspXI VCTCGAGB 1 cut(s) 1646
PstI CTGCAG 2 cut(s) 1742, 1839
PstNI CAGNNNCTG 1 cut(s) 1737
PsuI RGATCY 1 cut(s) 1307
PvuII CAGCTG 1 cut(s) 709
RsaI GTAC 7 cut(s) 10, 192, 659, 1808, 1880, 2165, 2204
RsaNI GTAC 7 cut(s) 9, 191, 658, 1807, 1879, 2164, 2203
RseI CAYNNNNRTG 2 cut(s) 1012, 1893
SapI GCTCTTC 1 cut(s) 1025
SatI GCNGC 5 cut(s) 571, 1738, 2472, 2511, 2549
Sau3AI GATC 9 cut(s) 261, 279, 576, 913, 1093, 1307, 1344, 1386, 2362
Sau96I GGNCC 4 cut(s) 55, 232, 611, 1046
SchI GAGTC 4 cut(s) 1176, 1487, 2008, 2287
ScrFI CCNGG 5 cut(s) 692, 1082, 1319, 1341, 2055
SduI GDGCHC 3 cut(s) 856, 1267, 1574
SfaNI GCATC 4 cut(s) 90, 1874, 2305, 2497
SfcI CTRYAG 3 cut(s) 638, 1738, 1835
Sfr274I CTCGAG 1 cut(s) 1646
SinI GGWCC 3 cut(s) 232, 611, 1046
SlaI CTCGAG 1 cut(s) 1646
SmiI ATTTAAAT 1 cut(s) 45
SmiMI CAYNNNNRTG 2 cut(s) 1012, 1893
SmlI CTYRAG 4 cut(s) 565, 661, 1646, 1793
SmoI CTYRAG 4 cut(s) 565, 661, 1646, 1793
SphI GCATGC 1 cut(s) 2159
SseBI AGGCCT 1 cut(s) 174
SsiI CCGC 3 cut(s) 580, 2472, 2511
SspI AATATT 1 cut(s) 253
SspMI CTAG 9 cut(s) 206, 309, 584, 1056, 1364, 1943, 1994, 2072, 2468
StuI AGGCCT 1 cut(s) 174
StyD4I CCNGG 5 cut(s) 690, 1080, 1317, 1339, 2053
StyI CCWWGG 5 cut(s) 175, 649, 679, 1186, 1993
SwaI ATTTAAAT 1 cut(s) 45
TaaI ACNGT 4 cut(s) 1591, 1892, 2038, 2207
TaiI ACGT 3 cut(s) 192, 907, 1833
TaqI TCGA 5 cut(s) 282, 1100, 1546, 1551, 1647
TatI WGTACW 3 cut(s) 657, 1806, 2202
TauI GCSGC 2 cut(s) 2474, 2513
TfiI GAWTC 6 cut(s) 374, 487, 643, 1548, 2006, 2432
TscAI CASTG 3 cut(s) 633, 865, 1579
TseFI GTSAC 3 cut(s) 1706, 2182, 2338
TseI GCWGC 3 cut(s) 570, 1737, 2548
Tsp45I GTSAC 3 cut(s) 1706, 2182, 2338
TspDTI ATGAA 8 cut(s) 63, 711, 756, 1050, 1263, 1265, 1569, 1874
TspGWI ACGGA 3 cut(s) 446, 1513, 2181
TspRI CASTG 3 cut(s) 633, 865, 1579
Van91I CCANNNNNTGG 1 cut(s) 1205
VneI GTGCAC 1 cut(s) 1263
VpaK11BI GGWCC 3 cut(s) 232, 611, 1046
XapI RAATTY 6 cut(s) 40, 674, 826, 871, 1194, 2126
XceI RCATGY 2 cut(s) 1780, 2159
XcmI CCANNNNNNNNNTGG 1 cut(s) 846
XhoI CTCGAG 1 cut(s) 1646
XmaJI CCTAGG 1 cut(s) 1993
XmiI GTMKAC 2 cut(s) 979, 1481
XmnI GAANNNNTTC 1 cut(s) 1606
XspI CTAG 9 cut(s) 206, 309, 584, 1056, 1364, 1943, 1994, 2072, 2468
ZraI GACGTC 1 cut(s) 905
Zsp2I ATGCAT 2 cut(s) 727, 2157
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.