MD07G1235900.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
30901754 .. 30906198
4445 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1235900.v1.1.491

Sequence Viewer

Length: 3297 bp
ATGTTGTCGATGATACACTGCTTGTGTTATATCTATATGATGATTATGGCTAATTGCTTAACTGCAGGTGTATTAACAATATCTCATACCAATATCAGCACAGATCAGTCTGCGCTTCTTTCTCTCAAAGCTCACATCACTCGTGACCCTCAAAACATCTTGACCGCCAACTGGTCCTCTGCCTCCAATTCCAACATTTGCAACTGGGTTGGCGTTAGCTGCGGTGCTGGCCACCACAGAGTCACGGCCTTAAATCTCTCGCACATGGGTCTTGCCGGAGTTATTCCACCGCATCTAGGCAACCTCTCATTTCTCGTTGAGTTGGGCCTTGAGAATAATAGCTTTCATGGTCCCCTACCGCAAGAACTGTCTCGTTTGCGCCGGTTGAAGGAGATTAACTTTGGAAACAACAACTTTATGGGAACCATTCCTTCGTGGTTTGGGTCCTTTGCTAAACTTCAAACCATCAGATTGTACGGTAATGGCTTCTCGGGTTTCATACCGACTGCTATCTTCAACTTATCTGCACTCGAAACAATTGATCTAGGCTGGAACCAACTATCGGAACTTCCGAACGAGATGGGCAATTTAGTTCAGCTGGAGGAGTTATCTTTGTATTCCAATGCCCTAAAAGCCTCTGCTCTTGTGCCTATCTTCAACATATCTTCTTTGACTTTTTTGAATCTATACGAAAACAACATGAGTGGCAGTCTTCCGGACAATATATGTGAGCATCTTTCGAGTATTCGAAAATTCAGTTTCGCTCGAAACCAGCTTGACGGTCTGATTCCCTCCAAACTGTGGCAATGCAAAGAGCTTCGTATAATCTCATTACACTCTAACAATTTCCGTGGAAGCATACCCAAAAGTCTTGCCAATTTGACCTACTTAACCACGATTATTCTTAGTGATAATCATTTAACAGGTACAATACCAGATGAGATTGGTGATCTTCCGCATTTAGAGTTTTTGGATCTGGGTATTAATAATCTCAGTGGCGTCATCCCATCCAAACTCTTCAATCTCTCCATGATAAGAGTAATAGGGCTTCCTTCCAATCAGCTCTCAGGTAGCCTCCCAACAAACATCGGTCTTAACGCTCCAAACCTAGAAATCCTTTATGTAGCCGGAACTAACCTCGTGGGTGGACTACTCCCTAACCTCTCCAATGCTTCCAAGCTCAGGGAGCTAGACATGAGCGAAAACTCATTTACCGGGTTTCTTCCTAGCACGCTCTGTTCCTTGAAAAACCTTGAGCGTCTTTTCTTGGACTCGAATAATTTGACAATTGATGCTTCTACTCCACAAGCACCAAGCACTCTCTCTTGCTTGTTTAATCTTAGAAACTTGACAAGCTTATACTTGGGAGACAATCCACTAAACACCACGATTCCAGCTTCTCGCAGGAATCTCTCTACGTCACTCCTATATGTGAGTTTATTCCGTTCCAACATTAGGGGCAACATTCCAGTAGAAATTGGCAACTTGAGCAGCTTGATATCACTAGAGCTGGGAAACAATCAGTTGAGTGGAGCAATTCCAACTTCAATACAAAGGCTACAAAATCTCCAAGTTTTGGATTTGCATGATAATGAACTGCAAGGACATATCCCGTATGAACTCTGTCAACTAAACAACCTAGCCGATTTATATTTGCATGGTAATCGGCTCTCTGGTTCTATTCCTTCCTGCTTGGGTACTTTGGCAGTAGCTCTAAGATCTCTATGGTTAGGGTCCAATTTGTTAACTTCAAAAATACCATCTTCCTTGTGGGAACTCAAGTATTTATTGTACCTCAACTTGTCATCCAATTCTCTAGTTGGACCACTCTCGGAAGACATCGGAAAGTTGAAAGAAGTGCTGAATATGGACTTGTCAAATAACCATTTCTCCGGAAACATTCCCGATAGCATTGGGGGTCTTCAGAAAATGATTAATTTGTCCTTGGCAAACAATTATTTAGAAGGCCCTATTCCCAGTTCATTTAAAACCTTGCTAAGCCTAGAATTCTTGGATTTGTCCAAAAACAATCTATCTGGAGTGATCCCAAAGTCATTGGAAGCACTCTTGTATCTCAAGCATCTGAATTTGTCTTTCAACAAACTCCAAGGAGAAATTCCAACCGGCGGGCCTTTCGGAAACTTCTCTGATGATTCATTTGTATCAAACGGTGCACTCTGCGGTACTTCCCGACTCCATTTTCCATTATGCAAATATAGAACAAAAGTTGAGCCAAATTGGAGGAAAGCTAAATATATCATGCCAGGGGTCATGTCAGTAATACTCCTAGCGGCTGCTGCATTGATTCTGGTGCTATGCAGGAAAAGGAATGTTGAAGTTGTAAGAGAAACTGCCTTGCTACGTCAAGTTCTTTGGAGAAGAATTTCGCGCCTAGAACTTGTAAGGGCGACAAATGGACTTCACGACAGTAACTTACTAGGCACAGGGGGGTTTGGCTCAGTATACAGAGGAACACTGTCAGACGGGATAGATATCGCCCTCAAGGTTTTCAATTTACAGCTAGAAGGGGCATTCAAGAGTTTTGCGAAGGAATGTGAAATGCTAAGCAATATCCGTCATCGGAATCTCATTAAAATCATAAGTTGTTGCGATGAACTTGATTTCAAAGCCCTGGTGCTTCAATTGATGCCTAATGGAAGCCTCGAACAGTGGTTGTATTCTCCAAACCGCTCCATGACTATCCTGCAGAGGTTGGACATAATGAAAGATGTTGCATTGGCACTAGAATATCTTCATCAAGGTTACTCGATACCTATCGTTCATTGTGACGTGAAACCAAGCAATATACTATTAGATGATGATATGGTTGCACATGTTGCTGATTTTGGCATTGCAAGACTCATCGGCAGTGGAGATTCGATGACGGAAACAATGACCCTAGCCACAGTTGGATACATGGCTCCAGAGTTCGGGATGGAAGGAAGCGTTTCGACGAGTGGGGATGTGTATAGTTTTGGTATTGTACTCATGGAGACATTCACAAAAAGGAAGCCAACGGATGAGATGTTTGTTGGGGAAATGAATTTAAAGCAATGGATTGCAGATTCATTATTTCTAAATGCTGCTATAGACGAAGTTGTGGATGCCGATATACTTGGGACGGAGGAAGATGGTGGTTTCGTGAGCAGGAGTGATTGCTTGTCATCCGTTATGAGATTAGCTTTAGCTTGCACTGCAGCATTGCCGAAAGAAAGGATTAACATGAAAGATGCTGCAGTCGCACTCTATAAAATCAAGGTTAAGTATTTGAAGGACTCTGGAGGAGTGAATTCTTAG

Protein Analysis

1099

Amino Acids

120.41

Weight (kDa)

6.18

Isoelectric Point (pI)

36.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 33 - 74 3.9e-09 Leucine rich repeat N-terminal domain
LRR_8 PF13855 152 - 210 2.1e-06 Leucine rich repeat
LRR_14 PF23598 252 - 504 5.2e-09 Leucine-rich repeat region
LRR_8 PF13855 296 - 355 1.2e-06 Leucine rich repeat
LRR_14 PF23598 492 - 577 6.8e-07 Leucine-rich repeat region
LRR_8 PF13855 498 - 557 1.4e-08 Leucine rich repeat
LRR_14 PF23598 584 - 702 1.5e-08 Leucine-rich repeat region
LRR_8 PF13855 646 - 702 6.4e-07 Leucine rich repeat
Pkinase PF00069 809 - 1077 1.3e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 811 - 1077 7.2e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 56
Acc36I ACCTGC 1 cut(s) 56
AccB7I CCANNNNNTGG 2 cut(s) 801, 1576
AccBSI CCGCTC 1 cut(s) 2691
AccI GTMKAC 1 cut(s) 2463
AccII CGCG 1 cut(s) 2389
AccIII TCCGGA 2 cut(s) 715, 1892
AciI CCGC 9 cut(s) 165, 222, 290, 359, 956, 2127, 2181, 2291, 2689
AclWI GGATC 2 cut(s) 981, 2038
AcoI YGGCCR 1 cut(s) 229
AcsI RAATTY 7 cut(s) 752, 2006, 2086, 2115, 2382, 3043, 3289
AcuI CTGAAG 1 cut(s) 1907
AcyI GRCGYC 1 cut(s) 999
AfaI GTAC 6 cut(s) 476, 928, 1699, 1793, 2185, 2985
AflIII ACRYGT 1 cut(s) 2833
AjiI CACGTC 1 cut(s) 2791
AjnI CCWGG 2 cut(s) 2263, 2631
AjuI GAANNNNNNNTTGG 2 cut(s) 2100, 2132
Alw21I GWGCWC 1 cut(s) 2176
Alw26I GTCTC 3 cut(s) 375, 1362, 2987
Alw44I GTGCAC 1 cut(s) 2172
AlwI GGATC 2 cut(s) 981, 2038
Ama87I CYCGRG 1 cut(s) 490
Aor13HI TCCGGA 2 cut(s) 715, 1892
AoxI GGCC 5 cut(s) 229, 246, 325, 1966, 2129
ApaLI GTGCAC 1 cut(s) 2172
ApeKI GCWGC 7 cut(s) 219, 1491, 2294, 2297, 3083, 3197, 3233
ApoI RAATTY 7 cut(s) 752, 2006, 2086, 2115, 2382, 3043, 3289
AseI ATTAAT 2 cut(s) 984, 1935
Asp700I GAANNNNTTC 3 cut(s) 2383, 2751, 2947
AspLEI GCGC 3 cut(s) 115, 381, 2391
AspS9I GGNCC 8 cut(s) 174, 325, 350, 444, 1734, 1823, 1967, 2129
AsuC2I CCSGG 1 cut(s) 1216
AsuHPI GGTGA 1 cut(s) 959
AsuII TTCGAA 1 cut(s) 748
AvaI CYCGRG 1 cut(s) 490
AvaII GGWCC 5 cut(s) 174, 350, 444, 1734, 1823
BaeGI GKGCMC 1 cut(s) 2176
BaeI ACNNNNGTAYC 2 cut(s) 2054, 2087
BalI TGGCCA 1 cut(s) 231
BarI GAAGNNNNNNTAC 2 cut(s) 1032, 1064
BauI CACGAG 2 cut(s) 141, 1139
BbsI GAAGAC 3 cut(s) 704, 1842, 1913
Bbv12I GWGCWC 1 cut(s) 2176
BbvI GCAGC 7 cut(s) 206, 1503, 2281, 2284, 3070, 3209, 3220
BccI CCATC 6 cut(s) 473, 574, 1015, 1768, 2929, 3125
BceAI ACGGC 1 cut(s) 261
BcgI CGANNNNNNTGC 2 cut(s) 1646, 1680
BciT130I CCWGG 2 cut(s) 2265, 2633
BciVI GTATCC 1 cut(s) 2906
BcnI CCSGG 1 cut(s) 1216
BcoDI GTCTC 3 cut(s) 375, 1362, 2987
BfmI CTRYAG 5 cut(s) 63, 2705, 3087, 3195, 3234
BfuAI ACCTGC 1 cut(s) 56
BfuI GTATCC 1 cut(s) 2906
BglII AGATCT 1 cut(s) 1718
BisI GCNGC 8 cut(s) 220, 1492, 2292, 2295, 2298, 3084, 3198, 3234
BlpI GCTNAGC 2 cut(s) 1997, 2564
BlsI GCNGC 8 cut(s) 221, 1493, 2293, 2296, 2299, 3085, 3199, 3235
Bme1390I CCNGG 3 cut(s) 1216, 2265, 2633
Bme18I GGWCC 5 cut(s) 174, 350, 444, 1734, 1823
BmeT110I CYCGRG 1 cut(s) 490
BmgBI CACGTC 1 cut(s) 2791
BmgT120I GGNCC 8 cut(s) 174, 325, 350, 444, 1734, 1823, 1967, 2129
BmiI GGNNCC 6 cut(s) 352, 424, 445, 554, 1735, 2922
BmrFI CCNGG 3 cut(s) 1216, 2265, 2633
BmrI ACTGGG 2 cut(s) 214, 1971
BmsI GCATC 7 cut(s) 301, 742, 1282, 2089, 2637, 3094, 3220
BmuI ACTGGG 2 cut(s) 214, 1971
BpiI GAAGAC 3 cut(s) 704, 1842, 1913
BpmI CTGGAG 3 cut(s) 620, 2058, 2907
Bpu10I CCTNAGC 1 cut(s) 1181
Bpu1102I GCTNAGC 2 cut(s) 1997, 2564
Bpu14I TTCGAA 1 cut(s) 748
BpuEI CTTGAG 6 cut(s) 350, 1274, 1507, 1763, 2060, 2486
BpuMI CCSGG 1 cut(s) 1216
BsaBI GATNNNNATC 2 cut(s) 2492, 2774
BsaHI GRCGYC 1 cut(s) 999
BsaJI CCNNGG 5 cut(s) 850, 1944, 2107, 2264, 2631
BsaWI WCCGGW 2 cut(s) 715, 1892
BsaXI ACNNNNNCTCC 4 cut(s) 1551, 1581, 1874, 1904
Bse118I RCCGGY 2 cut(s) 381, 2123
Bse1I ACTGG 4 cut(s) 176, 209, 1469, 1977
Bse3DI GCAATG 4 cut(s) 812, 2850, 3059, 3200
Bse8I GATNNNNATC 2 cut(s) 2492, 2774
BseAI TCCGGA 2 cut(s) 715, 1892
BseBI CCWGG 2 cut(s) 2265, 2633
BseDI CCNNGG 5 cut(s) 850, 1944, 2107, 2264, 2631
BseGI GGATG 8 cut(s) 1002, 1007, 1805, 2940, 2968, 3025, 3109, 3164
BseJI GATNNNNATC 2 cut(s) 2492, 2774
BseMI GCAATG 4 cut(s) 812, 2850, 3059, 3200
BseMII CTCAG 4 cut(s) 1006, 1080, 1195, 2472
BseNI ACTGG 4 cut(s) 176, 209, 1469, 1977
BseRI GAGGAG 2 cut(s) 617, 3297
BseSI GKGCMC 1 cut(s) 2176
BseXI GCAGC 7 cut(s) 206, 1503, 2281, 2284, 3070, 3209, 3220
BseYI CCCAGC 1 cut(s) 1510
BsgI GTGCAG 1 cut(s) 510
Bsh1236I CGCG 1 cut(s) 2389
BshFI GGCC 5 cut(s) 231, 248, 327, 1968, 2131
BsiHKAI GWGCWC 1 cut(s) 2176
BsiHKCI CYCGRG 1 cut(s) 490
BsiSI CCGG 7 cut(s) 276, 382, 716, 1128, 1215, 1893, 2124
BslFI GGGAC 2 cut(s) 336, 3133
BsmAI GTCTC 3 cut(s) 375, 1362, 2987
BsmFI GGGAC 2 cut(s) 336, 3133
BsmI GAATGC 1 cut(s) 2531
BsnI GGCC 5 cut(s) 231, 248, 327, 1968, 2131
BsoBI CYCGRG 1 cut(s) 490
Bsp119I TTCGAA 1 cut(s) 748
Bsp1286I GDGCHC 1 cut(s) 2176
Bsp13I TCCGGA 2 cut(s) 715, 1892
Bsp143I GATC 6 cut(s) 103, 541, 949, 973, 1718, 2043
Bsp1720I GCTNAGC 2 cut(s) 1997, 2564
BspACI CCGC 9 cut(s) 165, 222, 290, 359, 956, 2127, 2181, 2291, 2689
BspANI GGCC 5 cut(s) 231, 248, 327, 1968, 2131
BspCNI CTCAG 4 cut(s) 1005, 1079, 1194, 2471
BspEI TCCGGA 2 cut(s) 715, 1892
BspFNI CGCG 1 cut(s) 2389
BspLI GGNNCC 6 cut(s) 352, 424, 445, 554, 1735, 2922
BspMAI CTGCAG 4 cut(s) 67, 2709, 3199, 3238
BspMI ACCTGC 1 cut(s) 56
BspPI GGATC 2 cut(s) 981, 2038
BspT104I TTCGAA 1 cut(s) 748
BsrBI CCGCTC 1 cut(s) 2691
BsrDI GCAATG 4 cut(s) 812, 2850, 3059, 3200
BsrFI RCCGGY 2 cut(s) 381, 2123
BsrI ACTGG 4 cut(s) 176, 209, 1469, 1977
BssAI RCCGGY 2 cut(s) 381, 2123
BssECI CCNNGG 5 cut(s) 850, 1944, 2107, 2264, 2631
BssMI GATC 6 cut(s) 103, 541, 949, 973, 1718, 2043
BssNAI GTATAC 1 cut(s) 2464
BssNI GRCGYC 1 cut(s) 999
BssSI CACGAG 2 cut(s) 141, 1139
BssT1I CCWWGG 2 cut(s) 1944, 2107
Bst1107I GTATAC 1 cut(s) 2464
Bst2BI CACGAG 2 cut(s) 141, 1139
Bst2UI CCWGG 2 cut(s) 2265, 2633
Bst4CI ACNGT 9 cut(s) 369, 479, 782, 801, 2171, 2429, 2478, 2670, 2908
Bst6I CTCTTC 1 cut(s) 1022
BstACI GRCGYC 1 cut(s) 999
BstAPI GCANNNNNTGC 1 cut(s) 2837
BstBI TTCGAA 1 cut(s) 748
BstC8I GCNNGC 4 cut(s) 229, 1232, 2129, 3190
BstDSI CCRYGG 1 cut(s) 850
BstF5I GGATG 8 cut(s) 1002, 1007, 1805, 2940, 2968, 3025, 3109, 3164
BstFNI CGCG 1 cut(s) 2389
BstHHI GCGC 3 cut(s) 115, 381, 2391
BstKTI GATC 6 cut(s) 106, 544, 952, 976, 1721, 2046
BstMAI GTCTC 3 cut(s) 375, 1362, 2987
BstMBI GATC 6 cut(s) 103, 541, 949, 973, 1718, 2043
BstMWI GCNNNNNNNGC 9 cut(s) 219, 228, 632, 1186, 1488, 2297, 2837, 3194, 3239
BstNI CCWGG 2 cut(s) 2265, 2633
BstNSI RCATGY 1 cut(s) 2837
BstSCI CCNGG 3 cut(s) 1214, 2263, 2631
BstSFI CTRYAG 5 cut(s) 63, 2705, 3087, 3195, 3234
BstSLI GKGCMC 1 cut(s) 2176
BstUI CGCG 1 cut(s) 2389
BstV1I GCAGC 7 cut(s) 206, 1503, 2281, 2284, 3070, 3209, 3220
BstV2I GAAGAC 3 cut(s) 704, 1842, 1913
BstX2I RGATCY 2 cut(s) 973, 1718
BstYI RGATCY 2 cut(s) 973, 1718
BstZ17I GTATAC 1 cut(s) 2464
BsuI GTATCC 1 cut(s) 2906
BsuRI GGCC 5 cut(s) 231, 248, 327, 1968, 2131
BtgI CCRYGG 1 cut(s) 850
BtgZI GCGATG 1 cut(s) 2625
BtrI CACGTC 1 cut(s) 2791
BtsCI GGATG 8 cut(s) 1002, 1007, 1805, 2940, 2968, 3025, 3109, 3164
BtsI GCAGTG 3 cut(s) 16, 2875, 3192
BtsIMutI CAGTG 6 cut(s) 16, 1000, 2474, 2675, 2875, 3192
BveI ACCTGC 1 cut(s) 56
Cac8I GCNNGC 4 cut(s) 229, 1232, 2129, 3190
CfoI GCGC 3 cut(s) 115, 381, 2391
Cfr10I RCCGGY 2 cut(s) 381, 2123
Cfr13I GGNCC 8 cut(s) 174, 325, 350, 444, 1734, 1823, 1967, 2129
CseI GACGC 2 cut(s) 988, 1247
Csp6I GTAC 6 cut(s) 475, 927, 1698, 1792, 2184, 2984
CspCI CAANNNNNGTGG 4 cut(s) 685, 720, 832, 867
CviQI GTAC 6 cut(s) 475, 927, 1698, 1792, 2184, 2984
DpnI GATC 6 cut(s) 105, 543, 951, 975, 1720, 2045
DpnII GATC 6 cut(s) 103, 541, 949, 973, 1718, 2043
DraI TTTAAA 2 cut(s) 1987, 3048
EaeI YGGCCR 1 cut(s) 229
Eam1104I CTCTTC 1 cut(s) 1022
EarI CTCTTC 1 cut(s) 1022
Eco130I CCWWGG 2 cut(s) 1944, 2107
Eco32I GATATC 2 cut(s) 1500, 2494
Eco47I GGWCC 5 cut(s) 174, 350, 444, 1734, 1823
Eco57I CTGAAG 1 cut(s) 1907
Eco88I CYCGRG 1 cut(s) 490
EcoO109I RGGNCCY 2 cut(s) 444, 1967
EcoRI GAATTC 2 cut(s) 2006, 3289
EcoRII CCWGG 2 cut(s) 2263, 2631
EcoRV GATATC 2 cut(s) 1500, 2494
EcoT14I CCWWGG 2 cut(s) 1944, 2107
ErhI CCWWGG 2 cut(s) 1944, 2107
FaqI GGGAC 2 cut(s) 336, 3133
FauI CCCGC 1 cut(s) 2120
FblI GTMKAC 1 cut(s) 2463
Fnu4HI GCNGC 8 cut(s) 220, 1492, 2292, 2295, 2298, 3084, 3198, 3234
FokI GGATG 8 cut(s) 989, 994, 1792, 2947, 2975, 3032, 3116, 3151
Fsp4HI GCNGC 8 cut(s) 220, 1492, 2292, 2295, 2298, 3084, 3198, 3234
GlaI GCGC 3 cut(s) 114, 380, 2390
GluI GCNGC 8 cut(s) 220, 1492, 2292, 2295, 2298, 3084, 3198, 3234
GsaI CCCAGC 1 cut(s) 1514
GsuI CTGGAG 3 cut(s) 620, 2058, 2907
HaeIII GGCC 5 cut(s) 231, 248, 327, 1968, 2131
HapII CCGG 7 cut(s) 276, 382, 716, 1128, 1215, 1893, 2124
HgaI GACGC 2 cut(s) 988, 1247
HhaI GCGC 3 cut(s) 115, 381, 2391
Hin1I GRCGYC 1 cut(s) 999
Hin6I GCGC 3 cut(s) 113, 379, 2389
HinP1I GCGC 3 cut(s) 113, 379, 2389
HincII GTYRAC 2 cut(s) 1628, 1746
HindII GTYRAC 2 cut(s) 1628, 1746
HindIII AAGCTT 1 cut(s) 1354
HpaI GTTAAC 1 cut(s) 1746
HpaII CCGG 7 cut(s) 276, 382, 716, 1128, 1215, 1893, 2124
HphI GGTGA 1 cut(s) 959
Hpy166II GTNNAC 5 cut(s) 1148, 1628, 1746, 2174, 2464
Hpy8I GTNNAC 5 cut(s) 1148, 1628, 1746, 2174, 2464
Hpy99I CGWCG 1 cut(s) 2956
HpyAV CCTTC 9 cut(s) 382, 441, 1062, 1695, 1958, 2519, 2542, 2933, 3265
HpyCH4III ACNGT 9 cut(s) 369, 479, 782, 801, 2171, 2429, 2478, 2670, 2908
HpyCH4IV ACGT 3 cut(s) 1418, 2362, 2790
HpyF10VI GCNNNNNNNGC 9 cut(s) 219, 228, 632, 1186, 1488, 2297, 2837, 3194, 3239
HpySE526I ACGT 3 cut(s) 1418, 2362, 2790
Hsp92I GRCGYC 1 cut(s) 999
HspAI GCGC 3 cut(s) 113, 379, 2389
Kpn2I TCCGGA 2 cut(s) 715, 1892
KspAI GTTAAC 1 cut(s) 1746
Kzo9I GATC 6 cut(s) 103, 541, 949, 973, 1718, 2043
LmnI GCTCC 5 cut(s) 1105, 1186, 1532, 2696, 2926
Lsp1109I GCAGC 7 cut(s) 206, 1503, 2281, 2284, 3070, 3209, 3220
LweI GCATC 7 cut(s) 301, 742, 1282, 2089, 2637, 3094, 3220
MaeII ACGT 3 cut(s) 1418, 2362, 2790
MaeIII GTNAC 6 cut(s) 143, 241, 1419, 2429, 2762, 2786
MalI GATC 6 cut(s) 105, 543, 951, 975, 1720, 2045
MbiI CCGCTC 1 cut(s) 2691
MboI GATC 6 cut(s) 103, 541, 949, 973, 1718, 2043
MfeI CAATTG 3 cut(s) 537, 1287, 2642
MflI RGATCY 2 cut(s) 973, 1718
MhlI GDGCHC 1 cut(s) 2176
MlsI TGGCCA 1 cut(s) 231
MluNI TGGCCA 1 cut(s) 231
MlyI GAGTC 5 cut(s) 249, 1265, 2187, 2853, 3269
MmeI TCCRAC 7 cut(s) 216, 1473, 1565, 1801, 2144, 2694, 2890
Mox20I TGGCCA 1 cut(s) 231
MroI TCCGGA 2 cut(s) 715, 1892
MroXI GAANNNNTTC 3 cut(s) 2383, 2751, 2947
MscI TGGCCA 1 cut(s) 231
MslI CAYNNNNRTG 1 cut(s) 1590
Msp20I TGGCCA 1 cut(s) 231
MspA1I CMGCKG 1 cut(s) 598
MspI CCGG 7 cut(s) 276, 382, 716, 1128, 1215, 1893, 2124
MspR9I CCNGG 3 cut(s) 1216, 2265, 2633
MunI CAATTG 3 cut(s) 537, 1287, 2642
Mva1269I GAATGC 1 cut(s) 2531
MvaI CCWGG 2 cut(s) 2265, 2633
MvnI CGCG 1 cut(s) 2389
MwoI GCNNNNNNNGC 9 cut(s) 219, 228, 632, 1186, 1488, 2297, 2837, 3194, 3239
NciI CCSGG 1 cut(s) 1216
NdeII GATC 6 cut(s) 103, 541, 949, 973, 1718, 2043
NlaIV GGNNCC 6 cut(s) 352, 424, 445, 554, 1735, 2922
NmuCI GTSAC 4 cut(s) 143, 241, 1419, 2786
NspI RCATGY 1 cut(s) 2837
NspV TTCGAA 1 cut(s) 748
PaqCI CACCTGC 1 cut(s) 56
PciI ACATGT 1 cut(s) 2833
PcsI WCGNNNNNNNCGW 1 cut(s) 569
PctI GAATGC 1 cut(s) 2531
PdmI GAANNNNTTC 3 cut(s) 2383, 2751, 2947
PfeI GAWTC 9 cut(s) 682, 787, 1390, 1408, 2153, 2305, 2584, 2876, 3065
PflMI CCANNNNNTGG 2 cut(s) 801, 1576
PkrI GCNGC 8 cut(s) 221, 1493, 2293, 2296, 2299, 3085, 3199, 3235
PleI GAGTC 5 cut(s) 248, 1265, 2187, 2853, 3269
PpsI GAGTC 5 cut(s) 248, 1265, 2187, 2853, 3269
PpuMI RGGWCCY 1 cut(s) 444
PscI ACATGT 1 cut(s) 2833
PshBI ATTAAT 2 cut(s) 984, 1935
Psp5II RGGWCCY 1 cut(s) 444
Psp6I CCWGG 2 cut(s) 2263, 2631
PspFI CCCAGC 1 cut(s) 1510
PspGI CCWGG 2 cut(s) 2263, 2631
PspN4I GGNNCC 6 cut(s) 352, 424, 445, 554, 1735, 2922
PspPI GGNCC 8 cut(s) 174, 325, 350, 444, 1734, 1823, 1967, 2129
PspPPI RGGWCCY 1 cut(s) 444
PstI CTGCAG 4 cut(s) 67, 2709, 3199, 3238
PsuI RGATCY 2 cut(s) 973, 1718
PvuII CAGCTG 1 cut(s) 598
RsaI GTAC 6 cut(s) 476, 928, 1699, 1793, 2185, 2985
RsaNI GTAC 6 cut(s) 475, 927, 1698, 1792, 2184, 2984
RseI CAYNNNNRTG 1 cut(s) 1590
SatI GCNGC 8 cut(s) 220, 1492, 2292, 2295, 2298, 3084, 3198, 3234
Sau3AI GATC 6 cut(s) 103, 541, 949, 973, 1718, 2043
Sau96I GGNCC 8 cut(s) 174, 325, 350, 444, 1734, 1823, 1967, 2129
SchI GAGTC 5 cut(s) 249, 1265, 2187, 2853, 3269
ScrFI CCNGG 3 cut(s) 1216, 2265, 2633
SduI GDGCHC 1 cut(s) 2176
SfaNI GCATC 7 cut(s) 301, 742, 1282, 2089, 2637, 3094, 3220
SfcI CTRYAG 5 cut(s) 63, 2705, 3087, 3195, 3234
SfuI TTCGAA 1 cut(s) 748
SinI GGWCC 5 cut(s) 174, 350, 444, 1734, 1823
SmiMI CAYNNNNRTG 1 cut(s) 1590
SmlI CTYRAG 6 cut(s) 329, 1253, 1486, 1778, 2075, 2501
SmoI CTYRAG 6 cut(s) 329, 1253, 1486, 1778, 2075, 2501
SsiI CCGC 9 cut(s) 165, 222, 290, 359, 956, 2127, 2181, 2291, 2689
StyD4I CCNGG 3 cut(s) 1214, 2263, 2631
StyI CCWWGG 2 cut(s) 1944, 2107
TaaI ACNGT 9 cut(s) 369, 479, 782, 801, 2171, 2429, 2478, 2670, 2908
TaiI ACGT 3 cut(s) 1421, 2365, 2793
TaqII GACCGA 1 cut(s) 1079
TatI WGTACW 1 cut(s) 2983
TauI GCSGC 1 cut(s) 2294
TfiI GAWTC 9 cut(s) 682, 787, 1390, 1408, 2153, 2305, 2584, 2876, 3065
TscAI CASTG 6 cut(s) 23, 1000, 2481, 2675, 2875, 3199
TseFI GTSAC 4 cut(s) 143, 241, 1419, 2786
TseI GCWGC 7 cut(s) 219, 1491, 2294, 2297, 3083, 3197, 3233
Tsp45I GTSAC 4 cut(s) 143, 241, 1419, 2786
TspGWI ACGGA 7 cut(s) 839, 1433, 2564, 2900, 3032, 3137, 3157
TspRI CASTG 6 cut(s) 23, 1000, 2481, 2675, 2875, 3199
Van91I CCANNNNNTGG 2 cut(s) 801, 1576
VneI GTGCAC 1 cut(s) 2172
VpaK11BI GGWCC 5 cut(s) 174, 350, 444, 1734, 1823
VspI ATTAAT 2 cut(s) 984, 1935
XapI RAATTY 7 cut(s) 752, 2006, 2086, 2115, 2382, 3043, 3289
XceI RCATGY 1 cut(s) 2837
XcmI CCANNNNNNNNNTGG 1 cut(s) 1767
XmiI GTMKAC 1 cut(s) 2463
XmnI GAANNNNTTC 3 cut(s) 2383, 2751, 2947
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.