Rroxscaffold_3G00246100

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Forward (+)
39195696 .. 39200406
4711 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00246100.1

Sequence Viewer

Length: 3321 bp
ATGCACATCTCTGTGACAATGCACGCAATGAAGAGAACTCGGTTCTCCCTCATGTTGCTGTTACACTGTTGTATGTGTAGCTTTACTGGTGTTGTGGTAGCAGCACAAAACAAGAATGTCAACACAGACCAGTTGGCTCTTCTTGCTCTCAAAGCTCACGTCACCAGTGATCCTCAGAAAATCATGACCAACTGGTCCACAGCCACCTCGGTCTGCAACTGGGTTGGCATTACTTGTGGTGCTCGCCACCTTCGAGCGGCGGTCTTGAATATCTCTTACTTTGATCTCACAGGAACCATTCCTCCAGAGCTAGGAAACCTGTCATTTCTTGTTCAACTGGACTTCACCAATAACAGTTTCCATGGCACTTTGCCCATGGAGTTGTCTCGCTTGCATCGATTGAAGTTGATTAGCTTTGGATACAACAATTTTATTGGTTCCTTACCCACTGAAATCTTCAACCTATCTGCACTGGAAAAGATTGATCTGACCAATAACCATCTATCAGGTAGCATACCAAGAAAAATCGGGAACTTAACAATGCTGAAGGAGATAATCCTTGATGGTAACAACTTCAAAGGAATTCCCAACGAGATCGGCATTTTAGCTCAGCTGGAGGTGTTGAATGTGGAAGACAATGCACTAAATGGTCCTTTGCCTGTTGTTGTCTTCAACTTGTCTTCTTTGACCCAAATGGGACTAACAAAGAACAACTTGACTGGTTGTATTCCAGACAATATATGTGAAAACCTTCCCAGTATTCAAGCACTTTTTTTGTCTTACAACCAGTTTGATGGTCCACTTCCATCCAAATTATGGCAATGCAAAGAGCTTCTCTATTTATCACTGTCGTTTAACAAATTCAGTGGAGGCATACCCAGAAATATTGGGAACTTGACCAGTTTAACGCATATATATCTTGCGGCAAACAATTTGCAAGGTACTATACCACATGAGATTGGTGATCTTTCAAAATTACAGGTTTTGTCACTTCCAGGTGTTAATGTTCATGGTGTTATCCCATCCACAATCTTCAACATGTCCTCGCTGATAGGAATATCGCTAGCTAGTAATCAGCTCTCAGATAGCCTCCCAGCAAACATAGGCCTTGGGGTTCCACATCTAAAGCAGTTTCTTGTATCAGGGAATAACCTCACTGGAGCAATTCCAAACTTCATATCTAATGCCTCTAACATCATAACCATAGACATGGCCGCTAACTATTTTTCGGGGTTTATTCCTAGCAAGCTCTGTGCCTTACCATACCTTGAGCGCCTAAACTTAGCAGAGAATTATTTGACTATTGATACTTCTGCTCCAGAAGTAAACATATTCTCTTGCTTGTCCAATCTTCAAAATTTAGGGACACTGTTACTGGCAAAAAATCCACTACACGCCATGCTTCCCATTTCATTTGCCAACCTCTCTACATCACTTCAATATATTGATCTAAGCGAATCCAATGTGATGGGTAACATTCCTTATGATATTGGCAACTTGAGTAGCTTGACAGCCTTATTCTTAGGTACCAATCAATTAGGTGGACCAATTCCAACTTCAATGGGAAGCCTACAGAATCTCCAAGCTTTGAATTTGAAGGAGAACAGATTGCAAGGACATATCCCAAATGAACTTTGTCAACTTCAGAATCTAGCCTTTTTACTGATTGGGGTTAATCAGCTCTCTGGTTCAATACCTTCTTGCTTGGGCAATTTAGCTACATCACTGAGAAGTCTATATCTGGGGTCCAATTTTTTAAATTCCACAATACCATCTACCTTGTGGGAACTTGCATATCTCTTGCACATAGACTTGTCATCCAATTCTCTAACTGGACCTCTCCCAGAAGATGTTGGTACTCTGAAAGTTGTGATAGATCTAGATTTATCAAACAACCGTTTATCTGGTGGGCTACCGAGCAGCATTGGGGTTCTAAACGATTTGGTCACTCTCGCCTTGGAAAATAATAATTTAAAAGGCTCTATTCCTAGTTCATTTGGGAACTTGCTAAGCTTAGAACTCTTGGACTTGTCTAAAAACAATCTATCTGGAGTGATTCCAAAGTCTCTAGAACGAGTCTTGCATCTTAACTATCTAAATTTGTCTTGCAACAGACTGGAGGGAGAAATTCCAGCAGGTGGACCTTTCAAAAACTTCTCTTCTGAATCATTTGTCTCAAATGGTGCGCTCTGTGGTGAATCCCGACTGCATGTTCTATCATGCAAAAACAGTTCAGTGAAACCACCTTCAACTAAAGCTAGTAGATCCATCTTGAAGTTTATTATTCCGGGGATACTGTCAGTAATACTCCTAGTGGCCTCCCTATTGGTGTTGATACTGCGCAGGAAGAAGAATGTGAATGTTGCAGTGGAGACTACCTTGTTATCTCAACCCCTATGGAGAAAAATTTCTTACTTGCAACTTCGAAGTGCAACAGATGGGTTTAATGTAAGCAACTTACTTGGCACCGGGGGTTTTGGCTCAGTGTATAAAGGAACACTAGATGGGATAGATGTGGCGATAAAGGTTTTCAATTTACAGCTAGAAGGGACTTTTAAAAGTTTTCATATTGAATGTGAGATGCTAAGCAAAATTCGCCACCGAAATCTTATCAAGATCATTAGTTGTTGCAGTCAAACTGATTTCAAAGCAGTGGTACTGAACTACATGCCTAATGGGAGCCTTGACAAGTGGTTGTATTCTCAGAGCTTTTCTCTGAACATCCTGCAGAGGTTGAATATAATGATAGATGTTGCGTCGGCATTGGAATATCTGCATCATGGTTATGGAACACCTATTGTCCATTGTGATCTGAAGCCCAGCAATATACTACTGGATAATGATATGGGAGCACATGTAGCTGATTTTGGTATTGCAAAACTCCTAGGCGGAGGAGATTCTATGACACAGACAATGACCCTCGCCACAATTGGGTACATGGCTCCAGAATATGGAATGGAAGGAATAGTTTCCAGAAGAGGGGATGTGTACAGTTTTGGTATTGTACTCATGGAAACATTCACAAAAAAGAAGCCGACAGATGAGATGTTTGTTGGGGAAATGAGTTTGAAGCAATGGGTTGCGAGTTCACTATCATCTCCAGATGCGACAGTTGAAGTTGTGGATGCCAATTTACTTGGGAAACAGGAAGATGTTGGTTTCATAAGCAAGAGGGTCTGTTTATCATCCATAATGGAATTAGCTGTAGCTTGTTCTGCAGAATCACCAGAAGAGAGGATGAATATGCAAGATGCTCTAGTGACACTCAATAAAATTAAGGTGAAGCTTTTGGAAGACGTTGAAGGTGGACGTGTGGTTTGA

Protein Analysis

1106

Amino Acids

120.02

Weight (kDa)

6.38

Isoelectric Point (pI)

36.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 41 - 79 4.8e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 93 - 185 2.2e-07 Leucine-rich repeat region
LRR_8 PF13855 141 - 192 2.9e-06 Leucine rich repeat
LRR_14 PF23598 173 - 257 5e-07 Leucine-rich repeat region
LRR_14 PF23598 242 - 451 2.2e-09 Leucine-rich repeat region
LRR_14 PF23598 497 - 583 2.6e-06 Leucine-rich repeat region
LRR_14 PF23598 577 - 706 4.7e-09 Leucine-rich repeat region
LRR_8 PF13855 648 - 706 3.7e-07 Leucine rich repeat
Pkinase PF00069 816 - 1086 3.3e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 817 - 1084 1.8e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2126
AasI GACNNNNNNGTC 1 cut(s) 193
Acc16I TGCGCA 1 cut(s) 2342
Acc36I ACCTGC 1 cut(s) 2126
Acc65I GGTACC 1 cut(s) 1526
AccB1I GGYRCC 2 cut(s) 1526, 2465
AccB7I CCANNNNNTGG 3 cut(s) 816, 2138, 2951
AccBSI CCGCTC 1 cut(s) 257
AciI CCGC 5 cut(s) 257, 260, 923, 1215, 2889
AclWI GGATC 2 cut(s) 164, 2259
AcoI YGGCCR 1 cut(s) 1212
AcsI RAATTY 9 cut(s) 582, 860, 1357, 1591, 1759, 2098, 2127, 2406, 2592
AcuI CTGAAG 3 cut(s) 566, 1628, 2834
AfaI GTAC 7 cut(s) 943, 1528, 1858, 2658, 2936, 2990, 3006
AfiI CCNNNNNNNGG 7 cut(s) 256, 311, 816, 2138, 2931, 2951, 2979
AflIII ACRYGT 3 cut(s) 1038, 2854, 3310
AjiI CACGTC 2 cut(s) 160, 3311
AjnI CCWGG 1 cut(s) 994
AjuI GAANNNNNNNTTGG 4 cut(s) 341, 373, 1540, 1572
AloI GAACNNNNNNTCC 2 cut(s) 286, 318
Alw21I GWGCWC 2 cut(s) 244, 2854
Alw26I GTCTC 4 cut(s) 390, 2070, 2179, 2366
AlwI GGATC 2 cut(s) 164, 2259
AoxI GGCC 3 cut(s) 1105, 1212, 2316
ApeKI GCWGC 2 cut(s) 101, 1920
ApoI RAATTY 9 cut(s) 582, 860, 1357, 1591, 1759, 2098, 2127, 2406, 2592
ArsI GACNNNNNNTTYG 3 cut(s) 144, 176, 3300
Asp700I GAANNNNTTC 3 cut(s) 750, 2407, 2968
Asp718I GGTACC 1 cut(s) 1526
AspA2I CCTAGG 1 cut(s) 2884
AspLEI GCGC 3 cut(s) 1275, 2188, 2343
AspS9I GGNCC 7 cut(s) 195, 650, 797, 1544, 1746, 1835, 2141
AsuC2I CCSGG 2 cut(s) 2289, 2470
AsuHPI GGTGA 6 cut(s) 154, 337, 974, 2207, 3216, 3292
AsuII TTCGAA 1 cut(s) 2425
AsuNHI GCTAGC 1 cut(s) 1063
AvaII GGWCC 7 cut(s) 195, 650, 797, 1544, 1746, 1835, 2141
AvrII CCTAGG 1 cut(s) 2884
BanI GGYRCC 2 cut(s) 1526, 2465
BbsI GAAGAC 4 cut(s) 639, 661, 672, 3300
Bbv12I GWGCWC 2 cut(s) 244, 2854
BbvI GCAGC 2 cut(s) 113, 1932
BciT130I CCWGG 1 cut(s) 996
BciVI GTATCC 2 cut(s) 413, 2286
BcnI CCSGG 2 cut(s) 2289, 2470
BcoDI GTCTC 4 cut(s) 390, 2070, 2179, 2366
BfmI CTRYAG 4 cut(s) 1571, 2726, 3204, 3216
BfoI RGCGCY 1 cut(s) 1276
BfuAI ACCTGC 1 cut(s) 2126
BfuI GTATCC 2 cut(s) 413, 2286
BglII AGATCT 1 cut(s) 1876
BisI GCNGC 5 cut(s) 102, 258, 924, 1215, 1921
BlnI CCTAGG 1 cut(s) 2884
BlpI GCTNAGC 3 cut(s) 609, 2009, 2585
BlsI GCNGC 5 cut(s) 103, 259, 925, 1216, 1922
Bme1390I CCNGG 3 cut(s) 996, 2289, 2470
Bme18I GGWCC 7 cut(s) 195, 650, 797, 1544, 1746, 1835, 2141
BmgBI CACGTC 2 cut(s) 160, 3311
BmgT120I GGNCC 7 cut(s) 195, 650, 797, 1544, 1746, 1835, 2141
BmiI GGNNCC 8 cut(s) 295, 439, 1116, 1528, 1747, 2467, 2681, 2943
BmrFI CCNGG 3 cut(s) 996, 2289, 2470
BmrI ACTGGG 2 cut(s) 229, 750
BmsI GCATC 7 cut(s) 403, 2092, 2571, 2785, 3094, 3115, 3241
BmtI GCTAGC 1 cut(s) 1067
BmuI ACTGGG 2 cut(s) 229, 750
BpiI GAAGAC 4 cut(s) 639, 661, 672, 3300
BplI GAGNNNNNCTC 2 cut(s) 2698, 2730
BpmI CTGGAG 8 cut(s) 288, 635, 1179, 1302, 2070, 2138, 2928, 3084
Bpu1102I GCTNAGC 3 cut(s) 609, 2009, 2585
Bpu14I TTCGAA 1 cut(s) 2425
BpuEI CTTGAG 2 cut(s) 1289, 1519
BpuMI CCSGG 2 cut(s) 2289, 2470
Bsa29I ATCGAT 1 cut(s) 397
BsaJI CCNNGG 8 cut(s) 207, 361, 375, 1108, 1956, 2288, 2469, 2884
BsaXI ACNNNNNCTCC 8 cut(s) 286, 316, 1300, 1330, 1563, 1593, 2841, 2871
Bsc4I CCNNNNNNNGG 7 cut(s) 256, 311, 816, 2138, 2931, 2951, 2979
Bse3DI GCAATG 3 cut(s) 33, 827, 3080
BseBI CCWGG 1 cut(s) 996
BseCI ATCGAT 1 cut(s) 397
BseDI CCNNGG 8 cut(s) 207, 361, 375, 1108, 1956, 2288, 2469, 2884
BseGI GGATG 8 cut(s) 806, 1022, 1817, 2721, 2989, 3130, 3185, 3243
BseLI CCNNNNNNNGG 7 cut(s) 256, 311, 816, 2138, 2931, 2951, 2979
BseMI GCAATG 3 cut(s) 33, 827, 3080
BseMII CTCAG 6 cut(s) 188, 623, 1095, 1718, 2496, 2717
BseRI GAGGAG 1 cut(s) 2907
BseXI GCAGC 2 cut(s) 113, 1932
BseYI CCCAGC 2 cut(s) 1093, 2819
BsgI GTGCAG 1 cut(s) 453
BshFI GGCC 3 cut(s) 1107, 1214, 2318
BshNI GGYRCC 2 cut(s) 1526, 2465
BshVI ATCGAT 1 cut(s) 397
BsiHKAI GWGCWC 2 cut(s) 244, 2854
BsiSI CCGG 2 cut(s) 2288, 2469
BslFI GGGAC 3 cut(s) 711, 1378, 2563
BslI CCNNNNNNNGG 7 cut(s) 256, 311, 816, 2138, 2931, 2951, 2979
BsmAI GTCTC 4 cut(s) 390, 2070, 2179, 2366
BsmFI GGGAC 3 cut(s) 711, 1378, 2563
BsnI GGCC 3 cut(s) 1107, 1214, 2318
Bsp119I TTCGAA 1 cut(s) 2425
Bsp1286I GDGCHC 2 cut(s) 244, 2854
Bsp1407I TGTACA 1 cut(s) 2988
Bsp1720I GCTNAGC 3 cut(s) 609, 2009, 2585
Bsp19I CCATGG 2 cut(s) 361, 375
BspACI CCGC 5 cut(s) 257, 260, 923, 1215, 2889
BspANI GGCC 3 cut(s) 1107, 1214, 2318
BspCNI CTCAG 6 cut(s) 187, 622, 1094, 1719, 2495, 2716
BspDI ATCGAT 1 cut(s) 397
BspHI TCATGA 1 cut(s) 183
BspLI GGNNCC 8 cut(s) 295, 439, 1116, 1528, 1747, 2467, 2681, 2943
BspMAI CTGCAG 2 cut(s) 2730, 3220
BspMI ACCTGC 1 cut(s) 2126
BspOI GCTAGC 1 cut(s) 1067
BspPI GGATC 2 cut(s) 164, 2259
BspQI GCTCTTC 1 cut(s) 144
BspT104I TTCGAA 1 cut(s) 2425
BspT107I GGYRCC 2 cut(s) 1526, 2465
BsrBI CCGCTC 1 cut(s) 257
BsrDI GCAATG 3 cut(s) 33, 827, 3080
BsrGI TGTACA 1 cut(s) 2988
BssECI CCNNGG 8 cut(s) 207, 361, 375, 1108, 1956, 2288, 2469, 2884
BssT1I CCWWGG 5 cut(s) 361, 375, 1108, 1956, 2884
Bst2UI CCWGG 1 cut(s) 996
Bst4CI ACNGT 9 cut(s) 68, 356, 849, 1371, 1898, 2231, 2298, 2993, 3112
Bst6I CTCTTC 5 cut(s) 26, 144, 2164, 2971, 3225
BstAUI TGTACA 1 cut(s) 2988
BstBI TTCGAA 1 cut(s) 2425
BstC8I GCNNGC 5 cut(s) 24, 244, 392, 1065, 1247
BstDSI CCRYGG 2 cut(s) 361, 375
BstF5I GGATG 8 cut(s) 806, 1022, 1817, 2721, 2989, 3130, 3185, 3243
BstH2I RGCGCY 1 cut(s) 1276
BstHHI GCGC 3 cut(s) 1275, 2188, 2343
BstMAI GTCTC 4 cut(s) 390, 2070, 2179, 2366
BstMWI GCNNNNNNNGC 5 cut(s) 143, 152, 2595, 2858, 3215
BstNI CCWGG 1 cut(s) 996
BstNSI RCATGY 4 cut(s) 1042, 2213, 2671, 2858
BstSCI CCNGG 3 cut(s) 994, 2287, 2468
BstSFI CTRYAG 4 cut(s) 1571, 2726, 3204, 3216
BstV1I GCAGC 2 cut(s) 113, 1932
BstV2I GAAGAC 4 cut(s) 639, 661, 672, 3300
BstX2I RGATCY 2 cut(s) 1876, 2264
BstXI CCANNNNNNTGG 3 cut(s) 794, 1210, 1468
BstYI RGATCY 2 cut(s) 1876, 2264
Bsu15I ATCGAT 1 cut(s) 397
BsuI GTATCC 2 cut(s) 413, 2286
BsuRI GGCC 3 cut(s) 1107, 1214, 2318
BsuTUI ATCGAT 1 cut(s) 397
BtgI CCRYGG 2 cut(s) 361, 375
BtrI CACGTC 2 cut(s) 160, 3311
BtsCI GGATG 8 cut(s) 806, 1022, 1817, 2721, 2989, 3130, 3185, 3243
BtsI GCAGTG 2 cut(s) 2373, 2658
BveI ACCTGC 1 cut(s) 2126
Cac8I GCNNGC 5 cut(s) 24, 244, 392, 1065, 1247
CciI TCATGA 1 cut(s) 183
CfoI GCGC 3 cut(s) 1275, 2188, 2343
Cfr13I GGNCC 7 cut(s) 195, 650, 797, 1544, 1746, 1835, 2141
ClaI ATCGAT 1 cut(s) 397
CseI GACGC 1 cut(s) 2745
Csp6I GTAC 7 cut(s) 942, 1527, 1857, 2657, 2935, 2989, 3005
CspCI CAANNNNNGTGG 2 cut(s) 847, 882
CviQI GTAC 7 cut(s) 942, 1527, 1857, 2657, 2935, 2989, 3005
DraI TTTAAA 3 cut(s) 1758, 1974, 2557
DrdI GACNNNNNNGTC 1 cut(s) 193
DseDI GACNNNNNNGTC 1 cut(s) 193
EaeI YGGCCR 1 cut(s) 1212
Eam1104I CTCTTC 5 cut(s) 26, 144, 2164, 2971, 3225
EarI CTCTTC 5 cut(s) 26, 144, 2164, 2971, 3225
EciI GGCGGA 1 cut(s) 2904
Eco130I CCWWGG 5 cut(s) 361, 375, 1108, 1956, 2884
Eco147I AGGCCT 1 cut(s) 1107
Eco47I GGWCC 7 cut(s) 195, 650, 797, 1544, 1746, 1835, 2141
Eco57I CTGAAG 3 cut(s) 566, 1628, 2834
EcoRI GAATTC 1 cut(s) 582
EcoRII CCWGG 1 cut(s) 994
EcoT14I CCWWGG 5 cut(s) 361, 375, 1108, 1956, 2884
ErhI CCWWGG 5 cut(s) 361, 375, 1108, 1956, 2884
FalI AAGNNNNNCTT 2 cut(s) 698, 730
FaqI GGGAC 3 cut(s) 711, 1378, 2563
Fnu4HI GCNGC 5 cut(s) 102, 258, 924, 1215, 1921
FokI GGATG 8 cut(s) 793, 1009, 1804, 2708, 2996, 3137, 3172, 3250
Fsp4HI GCNGC 5 cut(s) 102, 258, 924, 1215, 1921
FspI TGCGCA 1 cut(s) 2342
GlaI GCGC 3 cut(s) 1274, 2187, 2342
GluI GCNGC 5 cut(s) 102, 258, 924, 1215, 1921
GsaI CCCAGC 2 cut(s) 1097, 2823
GsuI CTGGAG 8 cut(s) 288, 635, 1179, 1302, 2070, 2138, 2928, 3084
HaeII RGCGCY 1 cut(s) 1276
HaeIII GGCC 3 cut(s) 1107, 1214, 2318
HapII CCGG 2 cut(s) 2288, 2469
HgaI GACGC 1 cut(s) 2745
HhaI GCGC 3 cut(s) 1275, 2188, 2343
Hin6I GCGC 3 cut(s) 1273, 2186, 2341
HinP1I GCGC 3 cut(s) 1273, 2186, 2341
HincII GTYRAC 2 cut(s) 121, 1640
HindII GTYRAC 2 cut(s) 121, 1640
HindIII AAGCTT 3 cut(s) 1584, 2011, 3284
HinfI GANTC 9 cut(s) 1457, 1576, 1648, 2056, 2076, 2165, 2198, 2897, 3221
HpaII CCGG 2 cut(s) 2288, 2469
HphI GGTGA 6 cut(s) 154, 337, 974, 2207, 3216, 3292
Hpy188I TCNGA 9 cut(s) 177, 489, 1084, 1647, 1863, 2164, 2706, 2718, 2814
Hpy99I CGWCG 1 cut(s) 2761
HpyAV CCTTC 9 cut(s) 260, 541, 761, 1591, 1707, 2256, 2540, 2954, 3296
HpyCH4III ACNGT 9 cut(s) 68, 356, 849, 1371, 1898, 2231, 2298, 2993, 3112
HpyCH4IV ACGT 3 cut(s) 159, 3297, 3310
HpyF10VI GCNNNNNNNGC 5 cut(s) 143, 152, 2595, 2858, 3215
HpySE526I ACGT 3 cut(s) 159, 3297, 3310
HspAI GCGC 3 cut(s) 1273, 2186, 2341
KpnI GGTACC 1 cut(s) 1530
LguI GCTCTTC 1 cut(s) 144
LmnI GCTCC 5 cut(s) 1160, 1321, 2679, 2849, 2947
Lsp1109I GCAGC 2 cut(s) 113, 1932
LweI GCATC 7 cut(s) 403, 2092, 2571, 2785, 3094, 3115, 3241
MaeII ACGT 3 cut(s) 159, 3297, 3310
MaeIII GTNAC 9 cut(s) 13, 60, 160, 566, 987, 1371, 1472, 1945, 3259
MbiI CCGCTC 1 cut(s) 257
MfeI CAATTG 1 cut(s) 2928
MflI RGATCY 2 cut(s) 1876, 2264
MhlI GDGCHC 2 cut(s) 244, 2854
MlyI GAGTC 1 cut(s) 2085
MmeI TCCRAC 1 cut(s) 1577
MroXI GAANNNNTTC 3 cut(s) 750, 2407, 2968
MslI CAYNNNNRTG 3 cut(s) 11, 1208, 2784
MspA1I CMGCKG 1 cut(s) 613
MspI CCGG 2 cut(s) 2288, 2469
MspR9I CCNGG 3 cut(s) 996, 2289, 2470
MunI CAATTG 1 cut(s) 2928
MvaI CCWGG 1 cut(s) 996
MwoI GCNNNNNNNGC 5 cut(s) 143, 152, 2595, 2858, 3215
NciI CCSGG 2 cut(s) 2289, 2470
NcoI CCATGG 2 cut(s) 361, 375
NheI GCTAGC 1 cut(s) 1063
NlaIV GGNNCC 8 cut(s) 295, 439, 1116, 1528, 1747, 2467, 2681, 2943
NmuCI GTSAC 5 cut(s) 13, 160, 987, 1945, 3259
NsbI TGCGCA 1 cut(s) 2342
NspI RCATGY 4 cut(s) 1042, 2213, 2671, 2858
NspV TTCGAA 1 cut(s) 2425
PagI TCATGA 1 cut(s) 183
PaqCI CACCTGC 1 cut(s) 2126
PceI AGGCCT 1 cut(s) 1107
PciI ACATGT 2 cut(s) 1038, 2854
PciSI GCTCTTC 1 cut(s) 144
PcsI WCGNNNNNNNCGW 2 cut(s) 250, 394
PdmI GAANNNNTTC 3 cut(s) 750, 2407, 2968
PfeI GAWTC 8 cut(s) 1457, 1576, 1648, 2056, 2165, 2198, 2897, 3221
PflMI CCANNNNNTGG 3 cut(s) 816, 2138, 2951
PkrI GCNGC 5 cut(s) 103, 259, 925, 1216, 1922
PleI GAGTC 1 cut(s) 2084
PpsI GAGTC 1 cut(s) 2084
PscI ACATGT 2 cut(s) 1038, 2854
Psp6I CCWGG 1 cut(s) 994
PspFI CCCAGC 2 cut(s) 1093, 2819
PspGI CCWGG 1 cut(s) 994
PspN4I GGNNCC 8 cut(s) 295, 439, 1116, 1528, 1747, 2467, 2681, 2943
PspPI GGNCC 7 cut(s) 195, 650, 797, 1544, 1746, 1835, 2141
PstI CTGCAG 2 cut(s) 2730, 3220
PsuI RGATCY 2 cut(s) 1876, 2264
PvuII CAGCTG 1 cut(s) 613
RsaI GTAC 7 cut(s) 943, 1528, 1858, 2658, 2936, 2990, 3006
RsaNI GTAC 7 cut(s) 942, 1527, 1857, 2657, 2935, 2989, 3005
RseI CAYNNNNRTG 3 cut(s) 11, 1208, 2784
SapI GCTCTTC 1 cut(s) 144
SatI GCNGC 5 cut(s) 102, 258, 924, 1215, 1921
Sau96I GGNCC 7 cut(s) 195, 650, 797, 1544, 1746, 1835, 2141
SchI GAGTC 1 cut(s) 2085
ScrFI CCNGG 3 cut(s) 996, 2289, 2470
SduI GDGCHC 2 cut(s) 244, 2854
SfaNI GCATC 7 cut(s) 403, 2092, 2571, 2785, 3094, 3115, 3241
SfcI CTRYAG 4 cut(s) 1571, 2726, 3204, 3216
SfuI TTCGAA 1 cut(s) 2425
SinI GGWCC 7 cut(s) 195, 650, 797, 1544, 1746, 1835, 2141
SmiMI CAYNNNNRTG 3 cut(s) 11, 1208, 2784
SmlI CTYRAG 2 cut(s) 1268, 1498
SmoI CTYRAG 2 cut(s) 1268, 1498
SseBI AGGCCT 1 cut(s) 1107
SsiI CCGC 5 cut(s) 257, 260, 923, 1215, 2889
SspI AATATT 1 cut(s) 886
StuI AGGCCT 1 cut(s) 1107
StyD4I CCNGG 3 cut(s) 994, 2287, 2468
StyI CCWWGG 5 cut(s) 361, 375, 1108, 1956, 2884
TaaI ACNGT 9 cut(s) 68, 356, 849, 1371, 1898, 2231, 2298, 2993, 3112
TaiI ACGT 3 cut(s) 162, 3300, 3313
TaqI TCGA 3 cut(s) 253, 397, 2425
TaqII GACCGA 1 cut(s) 199
TatI WGTACW 2 cut(s) 2988, 3004
TauI GCSGC 3 cut(s) 260, 926, 1217
TfiI GAWTC 8 cut(s) 1457, 1576, 1648, 2056, 2165, 2198, 2897, 3221
TseFI GTSAC 5 cut(s) 13, 160, 987, 1945, 3259
TseI GCWGC 2 cut(s) 101, 1920
Tsp45I GTSAC 5 cut(s) 13, 160, 987, 1945, 3259
TspDTI ATGAA 9 cut(s) 44, 998, 1165, 1401, 1644, 1983, 2555, 3151, 3254
Van91I CCANNNNNTGG 3 cut(s) 816, 2138, 2951
VpaK11BI GGWCC 7 cut(s) 195, 650, 797, 1544, 1746, 1835, 2141
XapI RAATTY 9 cut(s) 582, 860, 1357, 1591, 1759, 2098, 2127, 2406, 2592
XbaI TCTAGA 2 cut(s) 1879, 2068
XceI RCATGY 4 cut(s) 1042, 2213, 2671, 2858
XcmI CCANNNNNNNNNTGG 2 cut(s) 813, 1779
XmaJI CCTAGG 1 cut(s) 2884
XmnI GAANNNNTTC 3 cut(s) 750, 2407, 2968
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.