RchiOBHm_Chr5g0040431

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
35122892 .. 35124888
1997 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31893

Sequence Viewer

Length: 1815 bp
ATGAGGGGTAGCATTCCCAGTGATATTGGCAATATGAGCAGCTTGATAGCCTTATCCCTGGATTACAATCAATTAAGTGGACCAATTCAAACTACAATGGGAAGCCTAAAGAATCTCCAAAGGTCGTACATGAACGATAACCAACTGCAAGGATACATCCCATATGAACTCTGTCAACTAGAAAACCTAGTCGATTTGCTGTTGGGTGGTAATCAACTCTCTGGTTCTATACCTTCCTGTTTGGGAAATCTAGCCGCAGCACTGAGAACTCTATCATTGAACTCCAATTTGTTAACTTCCACTATACCGTCTACCTTGTGGAGAATCAAATATATCCTGCACGTAAATTTATCGTCCAATTCTCTAATTGATATTGATTTATCAAGCAACCATTTATCTGGGATTATACCAGGAAGCATTGGGGGTCTTCAAGATTTGGTCAATCTCTCCTTGGCAAGTAACAATTTAGAAGGCCTTATTCCTACTTCATTCGACAACATGCTAAGCCTGGAACTCTTGGATTTATCCCAAAACAATCTATCTGGTGAGATTCCAAAGTCTCTAGAAGCACTCTTGCACCTTAGATATTTGAATATGTCTTTCAACAGACTCCGCGGAGACATTCCAACAGGTGGGCCTTTCAGAAACTTCTCTGCTCAATCATTTGTCTCAAATAGTGCACTTTGTGGTGCACCCCAACTACATATTGCAGCATGCAAAAACAGAACAATCAAGCTGCATTCAACTAAAGCTAGAGGATCCATCTTAAAGTATGCTATTCCAGGGATCATGTCAGTGATACTCCTAGTGACCTCTATATCAATGTTGATACTATGCAGAAAAAGGCATGTGGAAGTTGCAAGAGAGACTACCTTGTGGCCTCAACTTCAATGGAGAAGAGTTTCATATCAAGAGCTTCGAACTGTTACTAATGGATTTAATGAAAGCAACTTGCTTGGCAGTGGGGGGTTTGGCTCAGTGTATAAAGGAACACTATCAGATGGGATAAATGTTGCGATAAAGGTTTTCAATTTACAGTTAGAAGGGGCGTTCCTGAGTTTTGATACCAAATGTGAAATTCTGGGCAGTATTCGTCATAGAAACCTTATCAAAATCATCAGTTGTTGTAGCCAAATTGATTTCAAAGCCGTGGTACTGGACTACATGCCTAATGGGAGCCTAGAGAAATGGTTGTATTCTCAAAACTTTTGTTTCAACATCCTGCAGAGGTTGAATATAATGATAGATGTTGCATCGGCATTGGAATACCTTCATCATGGTACTGAAATACCAATTGTCCACTGCGATTTGAAGCCCAGCAATATATTGTTAGATGATGATATGGTTGGACATGTTGCTGACTTTGGTATTGCAAGACTCTTGGGTGGAGGAGATTCCATCACTCAAACCATGACACTAGCCACAATTGGATATATGGCTCCAGGAATAGTTACCAGAAGAGGAGATATGTACAGTTTTGGTGTTGTACTTATGGAAACTTTCACAAAAAGGAAGCCAACAGATGAAATGTTTGTTGGGGAAACAAGTTTAAAGAAATGGGTTGCAAATTCATTACTTTCGGATTCAATAGTTGAAGTTGTGGATGCCAATTTACTTGGGACAGAGAATGATTTTTCGTTTGTGAGCAAGATAGATTGTTTATCGTCCATAATGAGATTAGCTCTAAGTTGTTGTGCAGAGTCACCAGAAGGAAGGATAAATATCCAAGATGCTATAGGCACACTTAATAAAATCATGATCAAGTTTTTGAAGGACGCTGCAGGAGGTGTGGTTTTACGCCGCCATCTTGCTTAA

Protein Analysis

604

Amino Acids

66.16

Weight (kDa)

6.86

Isoelectric Point (pI)

38.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 146 - 204 1.8e-09 Leucine rich repeat
Pkinase PF00069 314 - 579 1.6e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 317 - 576 2.3e-34 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 632
AccI GTMKAC 1 cut(s) 311
AccII CGCG 1 cut(s) 615
AciI CCGC 4 cut(s) 255, 613, 615, 1801
AclWI GGATC 3 cut(s) 753, 766, 794
AcsI RAATTY 3 cut(s) 346, 1077, 1567
AdeI CACNNNGTG 1 cut(s) 686
AfaI GTAC 5 cut(s) 128, 1155, 1282, 1472, 1488
AfiI CCNNNNNNNGG 1 cut(s) 632
AflIII ACRYGT 1 cut(s) 1351
AjnI CCWGG 5 cut(s) 57, 409, 507, 781, 1441
AjuI GAANNNNNNNTTGG 2 cut(s) 1518, 1550
AluBI AGCT 5 cut(s) 42, 736, 752, 916, 1682
AluI AGCT 5 cut(s) 42, 736, 752, 916, 1682
Alw21I GWGCWC 2 cut(s) 682, 694
Alw26I GTCTC 4 cut(s) 564, 612, 673, 860
Alw44I GTGCAC 2 cut(s) 678, 690
AlwI GGATC 3 cut(s) 753, 766, 794
AoxI GGCC 3 cut(s) 472, 635, 878
ApaLI GTGCAC 2 cut(s) 678, 690
ApeKI GCWGC 5 cut(s) 39, 257, 710, 736, 1778
ApoI RAATTY 3 cut(s) 346, 1077, 1567
Asp700I GAANNNNTTC 2 cut(s) 901, 1269
AspS9I GGNCC 2 cut(s) 80, 635
AsuHPI GGTGA 2 cut(s) 557, 1695
AsuII TTCGAA 1 cut(s) 919
AvaII GGWCC 1 cut(s) 80
BaeGI GKGCMC 2 cut(s) 682, 694
BamHI GGATCC 1 cut(s) 758
BbsI GAAGAC 1 cut(s) 419
Bbv12I GWGCWC 2 cut(s) 682, 694
BbvI GCAGC 5 cut(s) 51, 269, 722, 723, 1765
BccI CCATC 4 cut(s) 770, 995, 1406, 1812
BceAI ACGGC 1 cut(s) 1133
BciT130I CCWGG 5 cut(s) 59, 411, 509, 783, 1443
BciVI GTATCC 1 cut(s) 146
BclI TGATCA 1 cut(s) 1758
BcoDI GTCTC 4 cut(s) 564, 612, 673, 860
BfaI CTAG 8 cut(s) 179, 188, 251, 563, 753, 806, 1181, 1418
BfmI CTRYAG 3 cut(s) 1223, 1734, 1779
BfuI GTATCC 1 cut(s) 146
BisI GCNGC 7 cut(s) 40, 255, 258, 711, 737, 1779, 1801
BlpI GCTNAGC 1 cut(s) 503
BlsI GCNGC 7 cut(s) 41, 256, 259, 712, 738, 1780, 1802
Bme1390I CCNGG 5 cut(s) 59, 411, 509, 783, 1443
Bme18I GGWCC 1 cut(s) 80
BmgT120I GGNCC 2 cut(s) 80, 635
BmiI GGNNCC 3 cut(s) 760, 1178, 1440
BmrFI CCNGG 5 cut(s) 59, 411, 509, 783, 1443
BmrI ACTGGG 1 cut(s) 12
BmsI GCATC 3 cut(s) 1262, 1594, 1720
BmuI ACTGGG 1 cut(s) 12
BpiI GAAGAC 1 cut(s) 419
BplI GAGNNNNNCTC 2 cut(s) 1666, 1698
BpmI CTGGAG 1 cut(s) 1425
Bpu1102I GCTNAGC 1 cut(s) 503
Bpu14I TTCGAA 1 cut(s) 919
BsaAI YACGTR 1 cut(s) 343
BsaBI GATNNNNATC 2 cut(s) 66, 1721
BsaJI CCNNGG 5 cut(s) 57, 450, 613, 782, 1149
BsaXI ACNNNNNCTCC 2 cut(s) 1776, 1806
Bsc4I CCNNNNNNNGG 1 cut(s) 632
Bse1I ACTGG 2 cut(s) 18, 1161
Bse8I GATNNNNATC 2 cut(s) 66, 1721
BseBI CCWGG 5 cut(s) 59, 411, 509, 783, 1443
BseDI CCNNGG 5 cut(s) 57, 450, 613, 782, 1149
BseGI GGATG 3 cut(s) 156, 1218, 1609
BseJI GATNNNNATC 2 cut(s) 66, 1721
BseLI CCNNNNNNNGG 1 cut(s) 632
BseMII CTCAG 3 cut(s) 254, 990, 1046
BseNI ACTGG 2 cut(s) 18, 1161
BseRI GAGGAG 2 cut(s) 1404, 1476
BseSI GKGCMC 2 cut(s) 682, 694
BseXI GCAGC 5 cut(s) 51, 269, 722, 723, 1765
BseYI CCCAGC 1 cut(s) 1316
BsgI GTGCAG 2 cut(s) 323, 1716
Bsh1236I CGCG 1 cut(s) 615
BshFI GGCC 3 cut(s) 474, 637, 880
BsiHKAI GWGCWC 2 cut(s) 682, 694
BslFI GGGAC 1 cut(s) 1633
BslI CCNNNNNNNGG 1 cut(s) 632
BsmAI GTCTC 4 cut(s) 564, 612, 673, 860
BsmFI GGGAC 1 cut(s) 1633
BsmI GAATGC 2 cut(s) 12, 739
BsnI GGCC 3 cut(s) 474, 637, 880
Bsp119I TTCGAA 1 cut(s) 919
Bsp1286I GDGCHC 2 cut(s) 682, 694
Bsp1407I TGTACA 1 cut(s) 1470
Bsp143I GATC 3 cut(s) 758, 786, 1758
Bsp1720I GCTNAGC 1 cut(s) 503
BspACI CCGC 4 cut(s) 255, 613, 615, 1801
BspANI GGCC 3 cut(s) 474, 637, 880
BspCNI CTCAG 3 cut(s) 255, 989, 1047
BspFNI CGCG 1 cut(s) 615
BspHI TCATGA 1 cut(s) 1755
BspLI GGNNCC 3 cut(s) 760, 1178, 1440
BspMAI CTGCAG 2 cut(s) 1227, 1783
BspPI GGATC 3 cut(s) 753, 766, 794
BspT104I TTCGAA 1 cut(s) 919
BsrGI TGTACA 1 cut(s) 1470
BsrI ACTGG 2 cut(s) 18, 1161
BssECI CCNNGG 5 cut(s) 57, 450, 613, 782, 1149
BssMI GATC 3 cut(s) 758, 786, 1758
BssT1I CCWWGG 1 cut(s) 450
Bst2UI CCWGG 5 cut(s) 59, 411, 509, 783, 1443
Bst4CI ACNGT 4 cut(s) 309, 925, 1038, 1475
Bst6I CTCTTC 2 cut(s) 892, 1453
BstAUI TGTACA 1 cut(s) 1470
BstBAI YACGTR 1 cut(s) 343
BstBI TTCGAA 1 cut(s) 919
BstC8I GCNNGC 1 cut(s) 715
BstDEI CTNAG 6 cut(s) 263, 503, 581, 976, 1055, 1685
BstDSI CCRYGG 2 cut(s) 613, 1149
BstF5I GGATG 3 cut(s) 156, 1218, 1609
BstFNI CGCG 1 cut(s) 615
BstKTI GATC 3 cut(s) 761, 789, 1761
BstMAI GTCTC 4 cut(s) 564, 612, 673, 860
BstMBI GATC 3 cut(s) 758, 786, 1758
BstMWI GCNNNNNNNGC 1 cut(s) 36
BstNI CCWGG 5 cut(s) 59, 411, 509, 783, 1443
BstNSI RCATGY 5 cut(s) 502, 717, 851, 1168, 1355
BstSCI CCNGG 5 cut(s) 57, 409, 507, 781, 1441
BstSFI CTRYAG 3 cut(s) 1223, 1734, 1779
BstSLI GKGCMC 2 cut(s) 682, 694
BstUI CGCG 1 cut(s) 615
BstV1I GCAGC 5 cut(s) 51, 269, 722, 723, 1765
BstV2I GAAGAC 1 cut(s) 419
BstX2I RGATCY 1 cut(s) 758
BstXI CCANNNNNNTGG 1 cut(s) 398
BstYI RGATCY 1 cut(s) 758
BsuI GTATCC 1 cut(s) 146
BsuRI GGCC 3 cut(s) 474, 637, 880
BtgI CCRYGG 2 cut(s) 613, 1149
BtsCI GGATG 3 cut(s) 156, 1218, 1609
BtsI GCAGTG 2 cut(s) 967, 1300
BtsIMutI CAGTG 6 cut(s) 25, 260, 801, 967, 984, 1300
Cac8I GCNNGC 1 cut(s) 715
CciI TCATGA 1 cut(s) 1755
Cfr13I GGNCC 2 cut(s) 80, 635
Cfr42I CCGCGG 1 cut(s) 616
CseI GACGC 1 cut(s) 1784
Csp6I GTAC 5 cut(s) 127, 1154, 1281, 1471, 1487
CviQI GTAC 5 cut(s) 127, 1154, 1281, 1471, 1487
DdeI CTNAG 6 cut(s) 263, 503, 581, 976, 1055, 1685
DpnI GATC 3 cut(s) 760, 788, 1760
DpnII GATC 3 cut(s) 758, 786, 1758
DraI TTTAAA 1 cut(s) 1551
DraIII CACNNNGTG 1 cut(s) 686
Eam1104I CTCTTC 2 cut(s) 892, 1453
EarI CTCTTC 2 cut(s) 892, 1453
Eco130I CCWWGG 1 cut(s) 450
Eco147I AGGCCT 1 cut(s) 474
Eco47I GGWCC 1 cut(s) 80
EcoRII CCWGG 5 cut(s) 57, 409, 507, 781, 1441
EcoT14I CCWWGG 1 cut(s) 450
ErhI CCWWGG 1 cut(s) 450
FaqI GGGAC 1 cut(s) 1633
FauNDI CATATG 1 cut(s) 163
FbaI TGATCA 1 cut(s) 1758
FblI GTMKAC 1 cut(s) 311
Fnu4HI GCNGC 7 cut(s) 40, 255, 258, 711, 737, 1779, 1801
FokI GGATG 3 cut(s) 143, 1205, 1616
Fsp4HI GCNGC 7 cut(s) 40, 255, 258, 711, 737, 1779, 1801
FspBI CTAG 8 cut(s) 179, 188, 251, 563, 753, 806, 1181, 1418
GluI GCNGC 7 cut(s) 40, 255, 258, 711, 737, 1779, 1801
GsaI CCCAGC 1 cut(s) 1320
GsuI CTGGAG 1 cut(s) 1425
HaeIII GGCC 3 cut(s) 474, 637, 880
HgaI GACGC 1 cut(s) 1784
HincII GTYRAC 2 cut(s) 176, 294
HindII GTYRAC 2 cut(s) 176, 294
HinfI GANTC 8 cut(s) 112, 324, 550, 609, 1377, 1394, 1583, 1700
HpaI GTTAAC 1 cut(s) 294
HphI GGTGA 2 cut(s) 557, 1695
Hpy166II GTNNAC 7 cut(s) 80, 176, 294, 312, 680, 692, 1300
Hpy188I TCNGA 3 cut(s) 644, 1000, 1582
Hpy188III TCNNGA 5 cut(s) 431, 563, 911, 1054, 1756
Hpy8I GTNNAC 7 cut(s) 80, 176, 294, 312, 680, 692, 1300
HpyAV CCTTC 7 cut(s) 243, 464, 1037, 1280, 1703, 1707, 1765
HpyCH4III ACNGT 4 cut(s) 309, 925, 1038, 1475
HpyCH4IV ACGT 1 cut(s) 342
HpyF10VI GCNNNNNNNGC 1 cut(s) 36
HpyF3I CTNAG 6 cut(s) 263, 503, 581, 976, 1055, 1685
HpySE526I ACGT 1 cut(s) 342
Ksp22I TGATCA 1 cut(s) 1758
KspAI GTTAAC 1 cut(s) 294
KspI CCGCGG 1 cut(s) 616
Kzo9I GATC 3 cut(s) 758, 786, 1758
LmnI GCTCC 2 cut(s) 1176, 1444
Lsp1109I GCAGC 5 cut(s) 51, 269, 722, 723, 1765
LweI GCATC 3 cut(s) 1262, 1594, 1720
MaeI CTAG 8 cut(s) 179, 188, 251, 563, 753, 806, 1181, 1418
MaeII ACGT 1 cut(s) 342
MaeIII GTNAC 5 cut(s) 458, 808, 925, 1450, 1701
MalI GATC 3 cut(s) 760, 788, 1760
MboI GATC 3 cut(s) 758, 786, 1758
MboII GAAGA 3 cut(s) 419, 909, 1470
MfeI CAATTG 2 cut(s) 1293, 1425
MflI RGATCY 1 cut(s) 758
MhlI GDGCHC 2 cut(s) 682, 694
MlyI GAGTC 3 cut(s) 603, 1371, 1709
MmeI TCCRAC 2 cut(s) 650, 1327
MnlI CCTC 7 cut(s) 749, 823, 891, 1221, 1382, 1454, 1778
MroXI GAANNNNTTC 2 cut(s) 901, 1269
MseI TTAA 7 cut(s) 74, 293, 767, 939, 1550, 1746, 1813
MslI CAYNNNNRTG 1 cut(s) 794
MspA1I CMGCKG 1 cut(s) 615
MspR9I CCNGG 5 cut(s) 59, 411, 509, 783, 1443
MunI CAATTG 2 cut(s) 1293, 1425
Mva1269I GAATGC 2 cut(s) 12, 739
MvaI CCWGG 5 cut(s) 59, 411, 509, 783, 1443
MvnI CGCG 1 cut(s) 615
MwoI GCNNNNNNNGC 1 cut(s) 36
NdeI CATATG 1 cut(s) 163
NdeII GATC 3 cut(s) 758, 786, 1758
NlaIV GGNNCC 3 cut(s) 760, 1178, 1440
NmuCI GTSAC 2 cut(s) 808, 1701
NspI RCATGY 5 cut(s) 502, 717, 851, 1168, 1355
NspV TTCGAA 1 cut(s) 919
PaeI GCATGC 1 cut(s) 717
PagI TCATGA 1 cut(s) 1755
PceI AGGCCT 1 cut(s) 474
PciI ACATGT 1 cut(s) 1351
PctI GAATGC 2 cut(s) 12, 739
PdmI GAANNNNTTC 2 cut(s) 901, 1269
PfeI GAWTC 5 cut(s) 112, 324, 550, 1394, 1583
PflMI CCANNNNNTGG 1 cut(s) 632
PfoI TCCNGGA 1 cut(s) 1441
PkrI GCNGC 7 cut(s) 41, 256, 259, 712, 738, 1780, 1802
PleI GAGTC 3 cut(s) 603, 1371, 1708
PpsI GAGTC 3 cut(s) 603, 1371, 1708
Ppu21I YACGTR 1 cut(s) 343
PscI ACATGT 1 cut(s) 1351
Psp6I CCWGG 5 cut(s) 57, 409, 507, 781, 1441
PspFI CCCAGC 1 cut(s) 1316
PspGI CCWGG 5 cut(s) 57, 409, 507, 781, 1441
PspN4I GGNNCC 3 cut(s) 760, 1178, 1440
PspPI GGNCC 2 cut(s) 80, 635
PstI CTGCAG 2 cut(s) 1227, 1783
PsuI RGATCY 1 cut(s) 758
RsaI GTAC 5 cut(s) 128, 1155, 1282, 1472, 1488
RsaNI GTAC 5 cut(s) 127, 1154, 1281, 1471, 1487
RseI CAYNNNNRTG 1 cut(s) 794
SacII CCGCGG 1 cut(s) 616
SaqAI TTAA 7 cut(s) 74, 293, 767, 939, 1550, 1746, 1813
SatI GCNGC 7 cut(s) 40, 255, 258, 711, 737, 1779, 1801
Sau3AI GATC 3 cut(s) 758, 786, 1758
Sau96I GGNCC 2 cut(s) 80, 635
SchI GAGTC 3 cut(s) 603, 1371, 1709
ScrFI CCNGG 5 cut(s) 59, 411, 509, 783, 1443
SduI GDGCHC 2 cut(s) 682, 694
SfaNI GCATC 3 cut(s) 1262, 1594, 1720
SfcI CTRYAG 3 cut(s) 1223, 1734, 1779
Sfr303I CCGCGG 1 cut(s) 616
SfuI TTCGAA 1 cut(s) 919
SgrBI CCGCGG 1 cut(s) 616
SinI GGWCC 1 cut(s) 80
SmiMI CAYNNNNRTG 1 cut(s) 794
SphI GCATGC 1 cut(s) 717
SseBI AGGCCT 1 cut(s) 474
SsiI CCGC 4 cut(s) 255, 613, 615, 1801
SspMI CTAG 8 cut(s) 179, 188, 251, 563, 753, 806, 1181, 1418
StuI AGGCCT 1 cut(s) 474
StyD4I CCNGG 5 cut(s) 57, 409, 507, 781, 1441
StyI CCWWGG 1 cut(s) 450
TaaI ACNGT 4 cut(s) 309, 925, 1038, 1475
TaiI ACGT 1 cut(s) 345
TaqI TCGA 3 cut(s) 192, 492, 919
TatI WGTACW 2 cut(s) 1470, 1486
TauI GCSGC 2 cut(s) 257, 1803
TfiI GAWTC 5 cut(s) 112, 324, 550, 1394, 1583
Tru1I TTAA 7 cut(s) 74, 293, 767, 939, 1550, 1746, 1813
Tru9I TTAA 7 cut(s) 74, 293, 767, 939, 1550, 1746, 1813
TscAI CASTG 6 cut(s) 25, 267, 801, 967, 984, 1307
TseFI GTSAC 2 cut(s) 808, 1701
TseI GCWGC 5 cut(s) 39, 257, 710, 736, 1778
Tsp45I GTSAC 2 cut(s) 808, 1701
TspDTI ATGAA 8 cut(s) 146, 180, 477, 894, 957, 1262, 1539, 1560
TspRI CASTG 6 cut(s) 25, 267, 801, 967, 984, 1307
Van91I CCANNNNNTGG 1 cut(s) 632
VneI GTGCAC 2 cut(s) 678, 690
VpaK11BI GGWCC 1 cut(s) 80
XapI RAATTY 3 cut(s) 346, 1077, 1567
XbaI TCTAGA 1 cut(s) 562
XceI RCATGY 5 cut(s) 502, 717, 851, 1168, 1355
XmiI GTMKAC 1 cut(s) 311
XmnI GAANNNNTTC 2 cut(s) 901, 1269
XspI CTAG 8 cut(s) 179, 188, 251, 563, 753, 806, 1181, 1418
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.