MD00G1192900.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Forward (+)
46692284 .. 46696016
3733 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1192900.v1.1.491

Sequence Viewer

Length: 2877 bp
ATGTATAACAATCATCTCGTTTGTTTTTTTTTTTTCCTTCTTTTTTGTTGGAATGCATGCACATATTTAACAGGTAGCATACCCAGAGAAATAGGCAACCTAACAATGGTGAAGGGCATATACCTTGACGACAACAAGTTCGAAGAACTTCCGAACGAGATGGGCAGTTTAGTTCAGCTGGAGGAGTTGTTTGTGCAGTCCAATGCCCTAACAGCCTCTGCTCTTGTGCCTGTCTTCAACATATCTTCTTTGACTATTTTAAATCTATACGGAAACAACATGAGTGGCAGTCTTCCGAACAATATATGTGAGCATCTTTCCAGTATTCGAATATTTAATTTTAGTGGAAACCAGCTTGACGGTCTGATTCCCTCCAAACTATGGCAATGCAAAGAGCTTCGTGAAATCTTATTATACTCTAACAATTTCCGTGGAAGCATACCCAAAAGTCTTGGCAATTTGACCTACTTAACCAAGATTATTCTTGGTGAGAATCATTTAACAGGTACAATACCGGATGAGATTGGTGATCTTCCGCAGTTAGAGTTTTTGGAACTGTTATTTAATAATCTTAGTGGCGTCATCCCATCCAAACTCTTCAATCTCTCTACGATAAGAAGAATAGAGCTTTCTTTCAATCAGCTCTCAGGTAGCCTCCCAGCAAACATCGGTCTTAACGCTCCAAACCTAGAATTCCTTTATGTAGCCAGAACTAACGTCGTGGCTGGACTACTCCCTAACCTCTCCAATGCTTCCAAGCTCAGGATGCTAGACATGAGCGAAAACTCATTTACCGGGTTTCTTCCTAGCACGCTCTGTTCCTTGAAAAACCTTGAGCTTCTTTCCTTGCGCTCGAATAATTTGACAATTGATGCTTCTACTCCACAAGCAGCAAGTACTCTCTCTTGCTTGTTTAATCTTAGAAATTTGACAAAGTTAGACTTGGGAGACAATCCACTAAACACCACGATTCCAGCTTCCCTCAGGAATCTCTCTACGTCACTCCTATATGTGTATTTATTCCGTTCCAACATCAGGGGCAACATTCCAGTAGAAATTGGCAACTTGAGCAGCTTGATATTACTAGACCTGGGAAACAATCAGTTGAGTGGAGCAATTCCAACTTCAATACAAAGGCTACAAAATCTCCAAGTTTTGGGTTTGTATGATAACGAACTGCAAGGACATATCCCGTATGAACTCTGTCAACTAAACAACCTAGCCGGTTTAGTTTTGCATGGTAATCGGCTCTCTGGTTCTATTCCTTCCTGCTTGGGTACTTTGGCAGTAGCTCTAAGATATCTACGGTTAGGGTCCAATTTGTTAACTTCAAAAATACCATCTTCCTTGTGGGAACTCAAGTATATATTGGAGCTAAACTTGTCATCCAATTCTCTAGTTGGACCACTCTCAGAAGACATCGGAAAGTTGAAAGATGTGGTGGTAATGGATTTATCAAATAACCATTTCTCCGGAAACATTCCCGGTAGCATTGGGGGTCTTCAGAAAATGATTAAATTGTCCTTGGCAAACAATTATTTAGAAGGCCCTATTCCCGGTTCATTTAAAACCTTGCTAAGCCTAGAATTCTTGGATTTGTCCAAAAACAATCTATCTGGAGTGATCCCAAAGTCATTGGAAGCCCTCTTGTATCTCAAGCATCTGAATTTGTCTTTCAACAAACTCCAAGGAGAAATTCCAACCGGCGGGCCTTTCGGAAACTTCTCTGATGATTCATTTGTATCAAACGGTGCACTCTGCGGTACTTCCCGACTCCATTTTCCATTATGCAAATATAGAACAAAAGTTGAGCCAAATTGGAGGAAAGCTAAATATATCATCCCAGGGGTCATGTCAGTAATACTCCTAGCGGCTGCTGCATTGATTGTGGTGCTATGCAGGAAAAGGAATGTTGAAGTTGTAAGAGAAACTGCCTTGCTACCTCAAGTTCTTTGGAGAAGAGTTTCGCGCCTAGAACTTGTAAGGGCGACAAATGGACTTCACGAGAGTAACTTACTAGGCACAGGGGGGTTTGGCTCAGTATACAGAGGAACACTGTCAGACGGGATAGATATTGCCCTCAAGGTTTTCAATTTACAGCTAGAAGAGGCATTCAAGAGTTTTGCGAAGGAATGTGAAATGCTAAGCAATATCCGTCATCGGAATCTCATTAAAATCATAAGTTATTGCGATGAACTTGATTTCAAAGCCCTGGTGCTTCAATTGATGCCTAATGGAAGCCTCGAACAGTGGTTGTATTCTCCAAACCGTTCCATGACTATCCTGCAGAGGTTGGACATAATGAAAGATGTTGCATTGGCACTAGAATATCTTCATCAAGGTTACTCGATACCTATCGTTCATTGTGACGTGAAACCAAGCAATATACTATTGGATGATGATATGGTTGCACATGTTGCTGATTTTGGCATTGCAAGACTCATCGGCAGTGGAGATTCGATGACGGAAACAATGACCCTAGCCACAGTTGGATACATGGCTCCAGAGTTCGGGATGGAAGGAAGCGTTTCGACGAGTGGGGATGTGTATAGTTTTGGTATTGTACTCATGGAGACATTCACAAAAAGGAAGCCAACGGATGAGATGTTTGTTGGGGAAATGAATTTAAAGCAATGGATTGCAGATTCATTATTTCTAAATGCTGCTATAGATGAAGTTGTGGATGCCGATATACCTGGGACGGAGGAAGATGGTGGTTTCGTGAGCATGAGGGTTTGCTTATCATCCGTTATGAGATTAGCCTTAGCTTGCACTGCAGCATTGCCGAAAGAAAGGATTAACATGAAAGATGCCGCAGTCGCACTCTATAAAATCAAGACTAAGTATTTGAAGGACTCTGGAGGAGTGAATTCTTAG

Protein Analysis

959

Amino Acids

105.48

Weight (kDa)

6.0

Isoelectric Point (pI)

35.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 449 - 562 2.1e-07 Leucine-rich repeat region
LRR_8 PF13855 506 - 562 2.3e-07 Leucine rich repeat
Pkinase PF00069 668 - 936 5.5e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 670 - 890 1.3e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 381, 1156
AccI GTMKAC 1 cut(s) 2043
AccII CGCG 1 cut(s) 1969
AccIII TCCGGA 1 cut(s) 1472
AciI CCGC 5 cut(s) 536, 1707, 1761, 1871, 2814
AclWI GGATC 1 cut(s) 1618
AcsI RAATTY 7 cut(s) 692, 925, 1586, 1666, 1695, 2623, 2869
AcuI CTGAAG 1 cut(s) 1487
AcyI GRCGYC 1 cut(s) 579
AfaI GTAC 5 cut(s) 508, 898, 1279, 1765, 2565
AfiI CCNNNNNNNGG 8 cut(s) 106, 381, 762, 1035, 1156, 1556, 1706, 2510
AflIII ACRYGT 1 cut(s) 2413
AjiI CACGTC 1 cut(s) 2371
AjnI CCWGG 4 cut(s) 1089, 1843, 2211, 2695
AjuI GAANNNNNNNTTGG 2 cut(s) 1680, 1712
Alw21I GWGCWC 1 cut(s) 1756
Alw26I GTCTC 2 cut(s) 942, 2567
Alw44I GTGCAC 1 cut(s) 1752
AlwI GGATC 1 cut(s) 1618
AlwNI CAGNNNCTG 1 cut(s) 218
Aor13HI TCCGGA 1 cut(s) 1472
AoxI GGCC 2 cut(s) 1546, 1709
ApaLI GTGCAC 1 cut(s) 1752
ApeKI GCWGC 6 cut(s) 890, 1071, 1874, 1877, 2663, 2777
ApoI RAATTY 7 cut(s) 692, 925, 1586, 1666, 1695, 2623, 2869
ArsI GACNNNNNNTTYG 4 cut(s) 122, 154, 2830, 2862
Asp700I GAANNNNTTC 4 cut(s) 147, 1963, 2331, 2527
AspLEI GCGC 2 cut(s) 852, 1971
AspS9I GGNCC 4 cut(s) 1314, 1403, 1547, 1709
AsuC2I CCSGG 3 cut(s) 796, 1485, 1557
AsuHPI GGTGA 3 cut(s) 121, 500, 539
AsuII TTCGAA 2 cut(s) 141, 328
AvaII GGWCC 2 cut(s) 1314, 1403
AxyI CCTNAGG 1 cut(s) 983
BaeGI GKGCMC 1 cut(s) 1756
BarI GAAGNNNNNNTAC 2 cut(s) 104, 136
BauI CACGAG 1 cut(s) 2003
BbsI GAAGAC 4 cut(s) 226, 284, 1422, 1493
Bbv12I GWGCWC 1 cut(s) 1756
BbvI GCAGC 6 cut(s) 902, 1083, 1861, 1864, 2650, 2789
BccI CCATC 5 cut(s) 154, 595, 1348, 2509, 2705
BcgI CGANNNNNNTGC 2 cut(s) 1226, 1260
BciT130I CCWGG 4 cut(s) 1091, 1845, 2213, 2697
BciVI GTATCC 1 cut(s) 2486
BcnI CCSGG 3 cut(s) 796, 1485, 1557
BcoDI GTCTC 2 cut(s) 942, 2567
BfmI CTRYAG 3 cut(s) 2285, 2667, 2775
BfuI GTATCC 1 cut(s) 2486
BisI GCNGC 8 cut(s) 891, 1072, 1872, 1875, 1878, 2664, 2778, 2814
BlpI GCTNAGC 2 cut(s) 1577, 2144
BlsI GCNGC 8 cut(s) 892, 1073, 1873, 1876, 1879, 2665, 2779, 2815
BmcAI AGTACT 1 cut(s) 898
Bme1390I CCNGG 7 cut(s) 796, 1091, 1485, 1557, 1845, 2213, 2697
Bme18I GGWCC 2 cut(s) 1314, 1403
BmgBI CACGTC 1 cut(s) 2371
BmgT120I GGNCC 4 cut(s) 1314, 1403, 1547, 1709
BmiI GGNNCC 2 cut(s) 1315, 2502
BmrFI CCNGG 7 cut(s) 796, 1091, 1485, 1557, 1845, 2213, 2697
BmsI GCATC 7 cut(s) 322, 756, 862, 1669, 2217, 2674, 2800
BpiI GAAGAC 4 cut(s) 226, 284, 1422, 1493
BpmI CTGGAG 3 cut(s) 200, 1638, 2487
Bpu10I CCTNAGC 2 cut(s) 761, 2764
Bpu1102I GCTNAGC 2 cut(s) 1577, 2144
Bpu14I TTCGAA 2 cut(s) 141, 328
BpuEI CTTGAG 6 cut(s) 854, 1087, 1343, 1640, 1929, 2066
BpuMI CCSGG 3 cut(s) 796, 1485, 1557
BsaBI GATNNNNATC 1 cut(s) 2354
BsaHI GRCGYC 1 cut(s) 579
BsaJI CCNNGG 8 cut(s) 430, 1090, 1524, 1687, 1843, 1844, 2211, 2696
BsaWI WCCGGW 2 cut(s) 514, 1472
BsaXI ACNNNNNCTCC 6 cut(s) 173, 203, 1131, 1161, 1454, 1484
Bsc4I CCNNNNNNNGG 8 cut(s) 106, 381, 762, 1035, 1156, 1556, 1706, 2510
Bse118I RCCGGY 2 cut(s) 1223, 1703
Bse1I ACTGG 2 cut(s) 321, 1049
Bse21I CCTNAGG 1 cut(s) 983
Bse3DI GCAATG 4 cut(s) 392, 2430, 2639, 2780
Bse8I GATNNNNATC 1 cut(s) 2354
BseAI TCCGGA 1 cut(s) 1472
BseBI CCWGG 4 cut(s) 1091, 1845, 2213, 2697
BseDI CCNNGG 8 cut(s) 430, 1090, 1524, 1687, 1843, 1844, 2211, 2696
BseJI GATNNNNATC 1 cut(s) 2354
BseLI CCNNNNNNNGG 8 cut(s) 106, 381, 762, 1035, 1156, 1556, 1706, 2510
BseMI GCAATG 4 cut(s) 392, 2430, 2639, 2780
BseMII CTCAG 5 cut(s) 660, 775, 997, 1425, 2052
BseNI ACTGG 2 cut(s) 321, 1049
BseRI GAGGAG 2 cut(s) 197, 2877
BseSI GKGCMC 1 cut(s) 1756
BseXI GCAGC 6 cut(s) 902, 1083, 1861, 1864, 2650, 2789
BseYI CCCAGC 1 cut(s) 658
BsgI GTGCAG 1 cut(s) 215
Bsh1236I CGCG 1 cut(s) 1969
BshFI GGCC 2 cut(s) 1548, 1711
BsiHKAI GWGCWC 1 cut(s) 1756
BsiSI CCGG 7 cut(s) 515, 795, 1224, 1473, 1485, 1557, 1704
BslFI GGGAC 1 cut(s) 2713
BslI CCNNNNNNNGG 8 cut(s) 106, 381, 762, 1035, 1156, 1556, 1706, 2510
BsmAI GTCTC 2 cut(s) 942, 2567
BsmFI GGGAC 1 cut(s) 2713
BsmI GAATGC 2 cut(s) 58, 2111
BsnI GGCC 2 cut(s) 1548, 1711
Bsp119I TTCGAA 2 cut(s) 141, 328
Bsp1286I GDGCHC 1 cut(s) 1756
Bsp13I TCCGGA 1 cut(s) 1472
Bsp143I GATC 2 cut(s) 529, 1623
Bsp1720I GCTNAGC 2 cut(s) 1577, 2144
BspACI CCGC 5 cut(s) 536, 1707, 1761, 1871, 2814
BspANI GGCC 2 cut(s) 1548, 1711
BspCNI CTCAG 5 cut(s) 659, 774, 996, 1424, 2051
BspEI TCCGGA 1 cut(s) 1472
BspFNI CGCG 1 cut(s) 1969
BspLI GGNNCC 2 cut(s) 1315, 2502
BspMAI CTGCAG 2 cut(s) 2289, 2779
BspPI GGATC 1 cut(s) 1618
BspT104I TTCGAA 2 cut(s) 141, 328
BsrDI GCAATG 4 cut(s) 392, 2430, 2639, 2780
BsrFI RCCGGY 2 cut(s) 1223, 1703
BsrI ACTGG 2 cut(s) 321, 1049
BssAI RCCGGY 2 cut(s) 1223, 1703
BssECI CCNNGG 8 cut(s) 430, 1090, 1524, 1687, 1843, 1844, 2211, 2696
BssMI GATC 2 cut(s) 529, 1623
BssNAI GTATAC 1 cut(s) 2044
BssNI GRCGYC 1 cut(s) 579
BssSI CACGAG 1 cut(s) 2003
BssT1I CCWWGG 2 cut(s) 1524, 1687
Bst1107I GTATAC 1 cut(s) 2044
Bst2BI CACGAG 1 cut(s) 2003
Bst2UI CCWGG 4 cut(s) 1091, 1845, 2213, 2697
Bst4CI ACNGT 8 cut(s) 362, 558, 1308, 1751, 2058, 2250, 2270, 2488
Bst6I CTCTTC 3 cut(s) 602, 1954, 2100
BstACI GRCGYC 1 cut(s) 579
BstAPI GCANNNNNTGC 1 cut(s) 2417
BstBI TTCGAA 2 cut(s) 141, 328
BstC8I GCNNGC 4 cut(s) 58, 812, 1709, 2770
BstDSI CCRYGG 1 cut(s) 430
BstFNI CGCG 1 cut(s) 1969
BstHHI GCGC 2 cut(s) 852, 1971
BstKTI GATC 2 cut(s) 532, 1626
BstMAI GTCTC 2 cut(s) 942, 2567
BstMBI GATC 2 cut(s) 529, 1623
BstMWI GCNNNNNNNGC 7 cut(s) 212, 766, 1068, 1877, 2417, 2774, 2819
BstNI CCWGG 4 cut(s) 1091, 1845, 2213, 2697
BstNSI RCATGY 2 cut(s) 60, 2417
BstSCI CCNGG 7 cut(s) 794, 1089, 1483, 1555, 1843, 2211, 2695
BstSFI CTRYAG 3 cut(s) 2285, 2667, 2775
BstSLI GKGCMC 1 cut(s) 1756
BstUI CGCG 1 cut(s) 1969
BstV1I GCAGC 6 cut(s) 902, 1083, 1861, 1864, 2650, 2789
BstV2I GAAGAC 4 cut(s) 226, 284, 1422, 1493
BstZ17I GTATAC 1 cut(s) 2044
Bsu36I CCTNAGG 1 cut(s) 983
BsuI GTATCC 1 cut(s) 2486
BsuRI GGCC 2 cut(s) 1548, 1711
BtgI CCRYGG 1 cut(s) 430
BtgZI GCGATG 1 cut(s) 2205
BtrI CACGTC 1 cut(s) 2371
BtsI GCAGTG 2 cut(s) 2455, 2772
BtsIMutI CAGTG 4 cut(s) 2054, 2255, 2455, 2772
Cac8I GCNNGC 4 cut(s) 58, 812, 1709, 2770
CaiI CAGNNNCTG 1 cut(s) 218
CfoI GCGC 2 cut(s) 852, 1971
Cfr10I RCCGGY 2 cut(s) 1223, 1703
Cfr13I GGNCC 4 cut(s) 1314, 1403, 1547, 1709
CseI GACGC 1 cut(s) 568
Csp6I GTAC 5 cut(s) 507, 897, 1278, 1764, 2564
CspCI CAANNNNNGTGG 4 cut(s) 265, 300, 412, 447
CviQI GTAC 5 cut(s) 507, 897, 1278, 1764, 2564
DpnI GATC 2 cut(s) 531, 1625
DpnII GATC 2 cut(s) 529, 1623
DraI TTTAAA 3 cut(s) 261, 1567, 2628
Eam1104I CTCTTC 3 cut(s) 602, 1954, 2100
EarI CTCTTC 3 cut(s) 602, 1954, 2100
Eco130I CCWWGG 2 cut(s) 1524, 1687
Eco32I GATATC 1 cut(s) 1301
Eco47I GGWCC 2 cut(s) 1314, 1403
Eco57I CTGAAG 1 cut(s) 1487
Eco81I CCTNAGG 1 cut(s) 983
EcoO109I RGGNCCY 1 cut(s) 1547
EcoRI GAATTC 3 cut(s) 692, 1586, 2869
EcoRII CCWGG 4 cut(s) 1089, 1843, 2211, 2695
EcoRV GATATC 1 cut(s) 1301
EcoT14I CCWWGG 2 cut(s) 1524, 1687
EcoT22I ATGCAT 1 cut(s) 58
ErhI CCWWGG 2 cut(s) 1524, 1687
FalI AAGNNNNNCTT 2 cut(s) 926, 958
FaqI GGGAC 1 cut(s) 2713
FauI CCCGC 1 cut(s) 1700
FblI GTMKAC 1 cut(s) 2043
Fnu4HI GCNGC 8 cut(s) 891, 1072, 1872, 1875, 1878, 2664, 2778, 2814
Fsp4HI GCNGC 8 cut(s) 891, 1072, 1872, 1875, 1878, 2664, 2778, 2814
GlaI GCGC 2 cut(s) 851, 1970
GluI GCNGC 8 cut(s) 891, 1072, 1872, 1875, 1878, 2664, 2778, 2814
GsaI CCCAGC 1 cut(s) 662
GsuI CTGGAG 3 cut(s) 200, 1638, 2487
HaeIII GGCC 2 cut(s) 1548, 1711
HapII CCGG 7 cut(s) 515, 795, 1224, 1473, 1485, 1557, 1704
HgaI GACGC 1 cut(s) 568
HhaI GCGC 2 cut(s) 852, 1971
Hin1I GRCGYC 1 cut(s) 579
Hin6I GCGC 2 cut(s) 850, 1969
HinP1I GCGC 2 cut(s) 850, 1969
HincII GTYRAC 2 cut(s) 1208, 1326
HindII GTYRAC 2 cut(s) 1208, 1326
HpaI GTTAAC 1 cut(s) 1326
HpaII CCGG 7 cut(s) 515, 795, 1224, 1473, 1485, 1557, 1704
HphI GGTGA 3 cut(s) 121, 500, 539
Hpy166II GTNNAC 4 cut(s) 1208, 1326, 1754, 2044
Hpy8I GTNNAC 4 cut(s) 1208, 1326, 1754, 2044
Hpy99I CGWCG 2 cut(s) 722, 2536
HpyAV CCTTC 7 cut(s) 47, 106, 1275, 1538, 2122, 2513, 2845
HpyCH4III ACNGT 8 cut(s) 362, 558, 1308, 1751, 2058, 2250, 2270, 2488
HpyCH4IV ACGT 3 cut(s) 717, 998, 2370
HpyF10VI GCNNNNNNNGC 7 cut(s) 212, 766, 1068, 1877, 2417, 2774, 2819
HpySE526I ACGT 3 cut(s) 717, 998, 2370
Hsp92I GRCGYC 1 cut(s) 579
HspAI GCGC 2 cut(s) 850, 1969
Kpn2I TCCGGA 1 cut(s) 1472
KspAI GTTAAC 1 cut(s) 1326
Kzo9I GATC 2 cut(s) 529, 1623
LmnI GCTCC 4 cut(s) 685, 1112, 1372, 2506
Lsp1109I GCAGC 6 cut(s) 902, 1083, 1861, 1864, 2650, 2789
LweI GCATC 7 cut(s) 322, 756, 862, 1669, 2217, 2674, 2800
MaeII ACGT 3 cut(s) 717, 998, 2370
MaeIII GTNAC 4 cut(s) 999, 2009, 2342, 2366
MalI GATC 2 cut(s) 531, 1625
MboI GATC 2 cut(s) 529, 1623
MfeI CAATTG 2 cut(s) 867, 2222
MhlI GDGCHC 1 cut(s) 1756
MlyI GAGTC 3 cut(s) 1767, 2433, 2849
MmeI TCCRAC 7 cut(s) 29, 1053, 1145, 1381, 1724, 2274, 2470
Mph1103I ATGCAT 1 cut(s) 58
MroI TCCGGA 1 cut(s) 1472
MroXI GAANNNNTTC 4 cut(s) 147, 1963, 2331, 2527
MspA1I CMGCKG 1 cut(s) 178
MspI CCGG 7 cut(s) 515, 795, 1224, 1473, 1485, 1557, 1704
MspR9I CCNGG 7 cut(s) 796, 1091, 1485, 1557, 1845, 2213, 2697
MunI CAATTG 2 cut(s) 867, 2222
Mva1269I GAATGC 2 cut(s) 58, 2111
MvaI CCWGG 4 cut(s) 1091, 1845, 2213, 2697
MvnI CGCG 1 cut(s) 1969
MwoI GCNNNNNNNGC 7 cut(s) 212, 766, 1068, 1877, 2417, 2774, 2819
NciI CCSGG 3 cut(s) 796, 1485, 1557
NdeII GATC 2 cut(s) 529, 1623
NlaIV GGNNCC 2 cut(s) 1315, 2502
NmuCI GTSAC 2 cut(s) 999, 2366
NsiI ATGCAT 1 cut(s) 58
NspI RCATGY 2 cut(s) 60, 2417
NspV TTCGAA 2 cut(s) 141, 328
PaeI GCATGC 1 cut(s) 60
PasI CCCWGGG 1 cut(s) 1844
PciI ACATGT 1 cut(s) 2413
PctI GAATGC 2 cut(s) 58, 2111
PdmI GAANNNNTTC 4 cut(s) 147, 1963, 2331, 2527
PfeI GAWTC 8 cut(s) 367, 493, 970, 988, 1733, 2164, 2456, 2645
PflMI CCANNNNNTGG 2 cut(s) 381, 1156
PkrI GCNGC 8 cut(s) 892, 1073, 1873, 1876, 1879, 2665, 2779, 2815
PleI GAGTC 3 cut(s) 1767, 2433, 2849
PpsI GAGTC 3 cut(s) 1767, 2433, 2849
PscI ACATGT 1 cut(s) 2413
Psp6I CCWGG 4 cut(s) 1089, 1843, 2211, 2695
PspFI CCCAGC 1 cut(s) 658
PspGI CCWGG 4 cut(s) 1089, 1843, 2211, 2695
PspN4I GGNNCC 2 cut(s) 1315, 2502
PspPI GGNCC 4 cut(s) 1314, 1403, 1547, 1709
PstI CTGCAG 2 cut(s) 2289, 2779
PstNI CAGNNNCTG 1 cut(s) 218
PvuII CAGCTG 1 cut(s) 178
RsaI GTAC 5 cut(s) 508, 898, 1279, 1765, 2565
RsaNI GTAC 5 cut(s) 507, 897, 1278, 1764, 2564
SatI GCNGC 8 cut(s) 891, 1072, 1872, 1875, 1878, 2664, 2778, 2814
Sau3AI GATC 2 cut(s) 529, 1623
Sau96I GGNCC 4 cut(s) 1314, 1403, 1547, 1709
ScaI AGTACT 1 cut(s) 898
SchI GAGTC 3 cut(s) 1767, 2433, 2849
ScrFI CCNGG 7 cut(s) 796, 1091, 1485, 1557, 1845, 2213, 2697
SduI GDGCHC 1 cut(s) 1756
SfaNI GCATC 7 cut(s) 322, 756, 862, 1669, 2217, 2674, 2800
SfcI CTRYAG 3 cut(s) 2285, 2667, 2775
SfuI TTCGAA 2 cut(s) 141, 328
SinI GGWCC 2 cut(s) 1314, 1403
SmlI CTYRAG 6 cut(s) 833, 1066, 1358, 1655, 1944, 2081
SmoI CTYRAG 6 cut(s) 833, 1066, 1358, 1655, 1944, 2081
SphI GCATGC 1 cut(s) 60
SsiI CCGC 5 cut(s) 536, 1707, 1761, 1871, 2814
SspI AATATT 1 cut(s) 333
StyD4I CCNGG 7 cut(s) 794, 1089, 1483, 1555, 1843, 2211, 2695
StyI CCWWGG 2 cut(s) 1524, 1687
TaaI ACNGT 8 cut(s) 362, 558, 1308, 1751, 2058, 2250, 2270, 2488
TaiI ACGT 3 cut(s) 720, 1001, 2373
TaqI TCGA 7 cut(s) 141, 328, 854, 2244, 2348, 2459, 2531
TaqII GACCGA 1 cut(s) 659
TatI WGTACW 2 cut(s) 896, 2563
TauI GCSGC 2 cut(s) 1874, 2816
TfiI GAWTC 8 cut(s) 367, 493, 970, 988, 1733, 2164, 2456, 2645
TscAI CASTG 4 cut(s) 2061, 2255, 2455, 2779
TseFI GTSAC 2 cut(s) 999, 2366
TseI GCWGC 6 cut(s) 890, 1071, 1874, 1877, 2663, 2777
Tsp45I GTSAC 2 cut(s) 999, 2366
TspGWI ACGGA 8 cut(s) 285, 419, 1013, 2144, 2480, 2612, 2717, 2737
TspRI CASTG 4 cut(s) 2061, 2255, 2455, 2779
Van91I CCANNNNNTGG 2 cut(s) 381, 1156
VneI GTGCAC 1 cut(s) 1752
VpaK11BI GGWCC 2 cut(s) 1314, 1403
XapI RAATTY 7 cut(s) 692, 925, 1586, 1666, 1695, 2623, 2869
XceI RCATGY 2 cut(s) 60, 2417
XcmI CCANNNNNNNNNTGG 1 cut(s) 1347
XmiI GTMKAC 1 cut(s) 2043
XmnI GAANNNNTTC 4 cut(s) 147, 1963, 2331, 2527
ZrmI AGTACT 1 cut(s) 898
Zsp2I ATGCAT 1 cut(s) 58
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.