Rmu_sc0004516.1_g000003

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004516.1
Physical Location & Seq
Reverse (-)
16783 .. 21258
4476 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004516.1_g000003.1.cds

Sequence Viewer

Length: 3378 bp
atgttgagaaatcggatcctattgtcgatagtgttgttgctgatacaatactggtccacggcagcacaaacaagcatcagcacagaccattctgctcttcttgctctcaaatctcatatcaccaatgaccctcaaaacatgatcttgaccaactggtcaacccccagctccatttgcaactggattggagttacttgtggtgcacggcatcttcgagttgctgccttgaatctctcttacatggatgtcacaggcaccattcctccggagctaggcaacctatcatttcttgttgagctgcgcttcagaaataacagtttccatggtaccattccccaagaattgtctcgtttgcgccgcctgaagattcttaatttcggattcaacaacttcaaaggaaccattccctcatcgttaggtgccgtatccaaacttcaaatcgtcagtttgtatggtaatcagttttcaggtttaatacctaccaacatcttcaacttatctgcaatgcaacaaattgatcttaggttcaatgatctatcaggtagcataccaagagaaattgggaacttaacaatgctgaagtcgattggccttgactctaataatctcagagaatttccaaatgaaattggcacattagatcagctggaagagataagtgtacaagacaatgccctagaagggcatcttcctggggctatcttcaacatgtcttctttgactgcattggctctgacaggaaacagcttgaatggtagacttccagacaatatatgtcagcatcttcctcgtattcaaaagttgtatttgtcacacaaccagtttgtcggtcctcttccatccaaattatggcaatgcaaagagcttgctgcattatcatgggggtataataatttcagtggaagcatacccaaaaatatagggaatttgacccagataaagtacattcatctcggctacaacaatttgacaggtactataccaaatgagattggtgatcttccaaaattggagtttttagcactcaatttaaacaatctcaatggcctcatcccatccagagtcttcaatatgtccacaatacaaacactctcacttactcttaatcacctctcgggtagtctccctgcaaacatcggacttggggttccaaacttgaaaggcttttttgtatcaatgaatgaacttagcggactaatccccaacttcatatctaatgcttccaagatcacaaagctaggcatggccgttaactcattttcagggcttatacctagcacagtttgtgccttagaaaaccttcagttgctttacttacatgaaaaccatttgaccatcgatacttctaatgcagaagtaaactttctctcttgtttggctactcttagagatctgaggagattacagttgtccaacaatccattaaacaccagccttcccgcttccaataggaatctcactagactagaatatatggatttaagcaattgcaatatgaggggtagcattcccagtgatattggtaatatgagcagcttgatagccttatacctgagatacaatcaattaagtggaccaattcaaactacaatgggaagcctaaagaatctccaacggttgtacttgaatgataaccaactgaaaggatacatccccaatgaactctgtcaactagaaaacctagtcgatttacaattgggtggtaatcaactctctggttctataccttcctgtttaggagatctagccacagcactaagaactctatcattgaactccaatttgttaaattccactataccatctaccttgtggagactccaatatatcctccatgtaaatttatcatccaatactctaattggccatctctccgaagatattggtaatttgaaagttgtgacacatatggatttatcaagcaaccatttatctgggattgcaccaggaagcattgggggccttcaagatttggtcaaactctccttggcaaataacagttttgaaggccctattcctacttcatttggcaacatgctaagcctggaactcttggatttatcccaaaacaatctatctggggagattccaaagtctctagaagcactcttgcacctcagctatttgaatctgtctttcaacagactccaaggagaaattccaacaggtgggcctttcagaaacttctctgctcaatcatttgtctcaaatggtgcactttgtggcgcaccccaactgcatattgcagcatgcaaaaacagaacaatcaagctgcattcaactaaagctagaggatccatcttgaagtatgttattccagggatcatgtcagtgatactcctagtgacctcaatatcgatgtttatactatgcagaaaaaggcatgtggaagttgcaagagagactaccttgtggcctcaacttcaatggagaagagtttcatatcaagagcttctaactgtgactaatggattaaatgaaagcaacttgcttggccgtggggggtttggctcggtgtataaaggaacactatcagatgggataaatgttgcgataaaggttttcaatttacagctagaaggggcattcacgagttttgataccgaatgtgaaatactaagcaatattcgtcatagaaaccttatcaaaatcatcagttgttgcagccaaattgatttcaaagccgtggtgctagactacatgcctaatgggagcctagagaaatggttgtattctcaaaacttttgtttgaacatcctgcagaggttgaatataatgatagatgttgcatcggcattggaataccttcatcatggtactgaaataccaattgtccgttgcgatttgaagcccagcaatatattgttagatggtgatatggttggacatgttgctgactttggtattgcaagactcttgggtggaggagattccatgactcacaccatgacgctagccacaatcggatatatggctccagagtatggaacggaaggaatagttaccagaaaaggagatgtgtacagttttggtgtggtacttatggaaactttcacaaaaaggaagccgacagatgaaatgtttgttggggaaacaggtttaaagcaatgggttgcaaattccttactttcggatgcaatagttgaagttgtggatgccaatttacttggggcagagaatgattttgcttttgtgagcaagacagattgtttatcatccataatgagattagctctaagctgttgtgcagagtcaccagaaggaaggataaatatgcaagatgttgtagtcacacttaataaaatcatgatcaagtttttgaaggacgctgcaggaggtgtggttttacgccgccatcttgctcaacagcccctttag

Protein Analysis

1125

Amino Acids

123.47

Weight (kDa)

7.55

Isoelectric Point (pI)

32.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 154
Acc65I GGTACC 1 cut(s) 326
AccB1I GGYRCC 3 cut(s) 254, 326, 419
AccB7I CCANNNNNTGG 3 cut(s) 849, 2168, 2984
AccI GTMKAC 1 cut(s) 757
AccIII TCCGGA 1 cut(s) 265
AciI CCGC 4 cut(s) 358, 1191, 1440, 3352
AclWI GGATC 5 cut(s) 10, 23, 2289, 2302, 2330
AcoI YGGCCR 3 cut(s) 1245, 1864, 2494
AcsI RAATTY 6 cut(s) 614, 925, 1789, 1840, 2157, 3118
AcuI CTGAAG 4 cut(s) 289, 383, 599, 1286
AdeI CACNNNGTG 1 cut(s) 2222
AfaI GTAC 8 cut(s) 328, 663, 944, 976, 1622, 2818, 3023, 3039
AfiI CCNNNNNNNGG 5 cut(s) 272, 681, 849, 2168, 2984
AflIII ACRYGT 2 cut(s) 708, 2887
AjnI CCWGG 4 cut(s) 691, 1945, 2043, 2317
AjuI GAANNNNNNNTTGG 4 cut(s) 2142, 2174, 3069, 3101
AloI GAACNNNNNNTCC 2 cut(s) 1131, 1163
Alw21I GWGCWC 2 cut(s) 205, 2218
Alw26I GTCTC 6 cut(s) 351, 1127, 1810, 2100, 2209, 2396
Alw44I GTGCAC 2 cut(s) 201, 2214
AlwI GGATC 5 cut(s) 10, 23, 2289, 2302, 2330
Ama87I CYCGRG 1 cut(s) 1114
Aor13HI TCCGGA 1 cut(s) 265
AoxI GGCC 9 cut(s) 589, 1045, 1245, 1864, 1960, 2008, 2171, 2414, 2494
ApaLI GTGCAC 2 cut(s) 201, 2214
ApeKI GCWGC 9 cut(s) 62, 221, 298, 869, 1533, 2246, 2272, 2664, 3329
ApoI RAATTY 6 cut(s) 614, 925, 1789, 1840, 2157, 3118
Asp700I GAANNNNTTC 3 cut(s) 1299, 2437, 2805
Asp718I GGTACC 1 cut(s) 326
AspLEI GCGC 3 cut(s) 303, 357, 2228
AspS9I GGNCC 6 cut(s) 54, 830, 1574, 1960, 2009, 2171
AsuHPI GGTGA 5 cut(s) 112, 1007, 1100, 2885, 3246
AsuNHI GCTAGC 1 cut(s) 2953
AvaI CYCGRG 1 cut(s) 1114
AvaII GGWCC 3 cut(s) 54, 830, 1574
BaeGI GKGCMC 2 cut(s) 205, 2218
BalI TGGCCA 1 cut(s) 1866
BamHI GGATCC 2 cut(s) 15, 2294
BanI GGYRCC 3 cut(s) 254, 326, 419
BarI GAAGNNNNNNTAC 2 cut(s) 417, 449
BauI CACGAG 1 cut(s) 2590
BbsI GAAGAC 2 cut(s) 705, 1057
Bbv12I GWGCWC 2 cut(s) 205, 2218
BbvCI CCTCAGC 1 cut(s) 2117
BbvI GCAGC 9 cut(s) 74, 208, 285, 856, 1545, 2258, 2259, 2676, 3316
BccI CCATC 9 cut(s) 847, 1063, 1343, 1810, 1875, 2306, 2531, 2864, 3363
BceAI ACGGC 6 cut(s) 75, 221, 407, 1232, 2481, 2669
BcgI CGANNNNNNTGC 2 cut(s) 770, 804
BciT130I CCWGG 4 cut(s) 693, 1947, 2045, 2319
BciVI GTATCC 2 cut(s) 436, 1640
BclI TGATCA 1 cut(s) 3309
BcoDI GTCTC 6 cut(s) 351, 1127, 1810, 2100, 2209, 2396
BfmI CTRYAG 2 cut(s) 2759, 3330
BfuI GTATCC 2 cut(s) 436, 1640
BglII AGATCT 2 cut(s) 1390, 1741
BlpI GCTNAGC 1 cut(s) 2039
Bme1390I CCNGG 4 cut(s) 693, 1947, 2045, 2319
Bme18I GGWCC 3 cut(s) 54, 830, 1574
BmeT110I CYCGRG 1 cut(s) 1114
BmgT120I GGNCC 6 cut(s) 54, 830, 1574, 1960, 2009, 2171
BmrFI CCNGG 4 cut(s) 693, 1947, 2045, 2319
BmrI ACTGGG 1 cut(s) 1506
BmsI GCATC 7 cut(s) 84, 217, 694, 790, 2798, 3124, 3145
BmtI GCTAGC 1 cut(s) 2957
BmuI ACTGGG 1 cut(s) 1506
BpiI GAAGAC 2 cut(s) 705, 1057
BplI GAGNNNNNCTC 2 cut(s) 3217, 3249
BpmI CTGGAG 1 cut(s) 2961
Bpu10I CCTNAGC 1 cut(s) 2117
Bpu1102I GCTNAGC 1 cut(s) 2039
Bsa29I ATCGAT 2 cut(s) 1338, 2357
BsaJI CCNNGG 8 cut(s) 57, 322, 692, 1986, 2149, 2318, 2497, 2685
BsaWI WCCGGW 1 cut(s) 265
BsaXI ACNNNNNCTCC 4 cut(s) 247, 277, 3327, 3357
Bsc4I CCNNNNNNNGG 5 cut(s) 272, 681, 849, 2168, 2984
Bse1I ACTGG 5 cut(s) 56, 158, 185, 820, 1512
Bse3DI GCAATG 3 cut(s) 510, 860, 3113
BseAI TCCGGA 1 cut(s) 265
BseBI CCWGG 4 cut(s) 693, 1947, 2045, 2319
BseCI ATCGAT 2 cut(s) 1338, 2357
BseDI CCNNGG 8 cut(s) 57, 322, 692, 1986, 2149, 2318, 2497, 2685
BseLI CCNNNNNNNGG 5 cut(s) 272, 681, 849, 2168, 2984
BseMI GCAATG 3 cut(s) 510, 860, 3113
BseMII CTCAG 4 cut(s) 622, 1385, 1544, 2131
BseNI ACTGG 5 cut(s) 56, 158, 185, 820, 1512
BseRI GAGGAG 2 cut(s) 1411, 2940
BseSI GKGCMC 2 cut(s) 205, 2218
BseXI GCAGC 9 cut(s) 74, 208, 285, 856, 1545, 2258, 2259, 2676, 3316
BseYI CCCAGC 2 cut(s) 164, 2852
BsgI GTGCAG 1 cut(s) 3267
BshFI GGCC 9 cut(s) 591, 1047, 1247, 1866, 1962, 2010, 2173, 2416, 2496
BshNI GGYRCC 3 cut(s) 254, 326, 419
BshVI ATCGAT 2 cut(s) 1338, 2357
BsiHKAI GWGCWC 2 cut(s) 205, 2218
BsiHKCI CYCGRG 1 cut(s) 1114
BsiSI CCGG 1 cut(s) 266
BslI CCNNNNNNNGG 5 cut(s) 272, 681, 849, 2168, 2984
BsmAI GTCTC 6 cut(s) 351, 1127, 1810, 2100, 2209, 2396
BsmI GAATGC 3 cut(s) 1506, 2275, 2585
BsnI GGCC 9 cut(s) 591, 1047, 1247, 1866, 1962, 2010, 2173, 2416, 2496
BsoBI CYCGRG 1 cut(s) 1114
Bsp1286I GDGCHC 2 cut(s) 205, 2218
Bsp13I TCCGGA 1 cut(s) 265
Bsp1407I TGTACA 2 cut(s) 661, 3021
Bsp1720I GCTNAGC 1 cut(s) 2039
Bsp19I CCATGG 1 cut(s) 322
BspACI CCGC 4 cut(s) 358, 1191, 1440, 3352
BspANI GGCC 9 cut(s) 591, 1047, 1247, 1866, 1962, 2010, 2173, 2416, 2496
BspCNI CTCAG 4 cut(s) 621, 1386, 1545, 2130
BspDI ATCGAT 2 cut(s) 1338, 2357
BspEI TCCGGA 1 cut(s) 265
BspHI TCATGA 1 cut(s) 3306
BspMAI CTGCAG 2 cut(s) 2763, 3334
BspOI GCTAGC 1 cut(s) 2957
BspPI GGATC 5 cut(s) 10, 23, 2289, 2302, 2330
BspQI GCTCTTC 1 cut(s) 102
BspT107I GGYRCC 3 cut(s) 254, 326, 419
BsrDI GCAATG 3 cut(s) 510, 860, 3113
BsrGI TGTACA 2 cut(s) 661, 3021
BsrI ACTGG 5 cut(s) 56, 158, 185, 820, 1512
BssECI CCNNGG 8 cut(s) 57, 322, 692, 1986, 2149, 2318, 2497, 2685
BssSI CACGAG 1 cut(s) 2590
BssT1I CCWWGG 3 cut(s) 322, 1986, 2149
Bst2BI CACGAG 1 cut(s) 2590
Bst2UI CCWGG 4 cut(s) 693, 1947, 2045, 2319
Bst4CI ACNGT 7 cut(s) 317, 1282, 1407, 1617, 2000, 2461, 3026
Bst6I CTCTTC 4 cut(s) 102, 645, 840, 2428
BstAUI TGTACA 2 cut(s) 661, 3021
BstC8I GCNNGC 3 cut(s) 867, 2251, 2955
BstDSI CCRYGG 4 cut(s) 57, 322, 2497, 2685
BstHHI GCGC 3 cut(s) 303, 357, 2228
BstMAI GTCTC 6 cut(s) 351, 1127, 1810, 2100, 2209, 2396
BstMWI GCNNNNNNNGC 3 cut(s) 101, 174, 1959
BstNI CCWGG 4 cut(s) 693, 1947, 2045, 2319
BstNSI RCATGY 6 cut(s) 712, 2038, 2253, 2387, 2704, 2891
BstSCI CCNGG 4 cut(s) 691, 1945, 2043, 2317
BstSFI CTRYAG 2 cut(s) 2759, 3330
BstSLI GKGCMC 2 cut(s) 205, 2218
BstV1I GCAGC 9 cut(s) 74, 208, 285, 856, 1545, 2258, 2259, 2676, 3316
BstV2I GAAGAC 2 cut(s) 705, 1057
BstX2I RGATCY 4 cut(s) 15, 1390, 1741, 2294
BstXI CCANNNNNNTGG 1 cut(s) 1934
BstYI RGATCY 4 cut(s) 15, 1390, 1741, 2294
Bsu15I ATCGAT 2 cut(s) 1338, 2357
BsuI GTATCC 2 cut(s) 436, 1640
BsuRI GGCC 9 cut(s) 591, 1047, 1247, 1866, 1962, 2010, 2173, 2416, 2496
BsuTUI ATCGAT 2 cut(s) 1338, 2357
BtgI CCRYGG 4 cut(s) 57, 322, 2497, 2685
BtsIMutI CAGTG 3 cut(s) 904, 1519, 2337
Cac8I GCNNGC 3 cut(s) 867, 2251, 2955
CciI TCATGA 1 cut(s) 3306
CfoI GCGC 3 cut(s) 303, 357, 2228
Cfr13I GGNCC 6 cut(s) 54, 830, 1574, 1960, 2009, 2171
ClaI ATCGAT 2 cut(s) 1338, 2357
CseI GACGC 2 cut(s) 2959, 3335
Csp6I GTAC 8 cut(s) 327, 662, 943, 975, 1621, 2817, 3022, 3038
CviQI GTAC 8 cut(s) 327, 662, 943, 975, 1621, 2817, 3022, 3038
DraI TTTAAA 2 cut(s) 1032, 3102
DraIII CACNNNGTG 1 cut(s) 2222
DrdI GACNNNNNNGTC 1 cut(s) 154
DseDI GACNNNNNNGTC 1 cut(s) 154
EaeI YGGCCR 3 cut(s) 1245, 1864, 2494
Eam1104I CTCTTC 4 cut(s) 102, 645, 840, 2428
EarI CTCTTC 4 cut(s) 102, 645, 840, 2428
Eco130I CCWWGG 3 cut(s) 322, 1986, 2149
Eco47I GGWCC 3 cut(s) 54, 830, 1574
Eco57I CTGAAG 4 cut(s) 289, 383, 599, 1286
Eco88I CYCGRG 1 cut(s) 1114
EcoO109I RGGNCCY 2 cut(s) 1960, 2009
EcoRII CCWGG 4 cut(s) 691, 1945, 2043, 2317
EcoT14I CCWWGG 3 cut(s) 322, 1986, 2149
ErhI CCWWGG 3 cut(s) 322, 1986, 2149
FalI AAGNNNNNCTT 2 cut(s) 672, 704
FauI CCCGC 1 cut(s) 1447
FauNDI CATATG 1 cut(s) 1908
FbaI TGATCA 1 cut(s) 3309
FblI GTMKAC 1 cut(s) 757
GlaI GCGC 3 cut(s) 302, 356, 2227
GsaI CCCAGC 2 cut(s) 168, 2856
GsuI CTGGAG 1 cut(s) 2961
HaeIII GGCC 9 cut(s) 591, 1047, 1247, 1866, 1962, 2010, 2173, 2416, 2496
HapII CCGG 1 cut(s) 266
HgaI GACGC 2 cut(s) 2959, 3335
HhaI GCGC 3 cut(s) 303, 357, 2228
Hin6I GCGC 3 cut(s) 301, 355, 2226
HinP1I GCGC 3 cut(s) 301, 355, 2226
HincII GTYRAC 3 cut(s) 159, 1252, 1670
HindII GTYRAC 3 cut(s) 159, 1252, 1670
HpaI GTTAAC 1 cut(s) 1252
HpaII CCGG 1 cut(s) 266
HphI GGTGA 5 cut(s) 112, 1007, 1100, 2885, 3246
HpyCH4III ACNGT 7 cut(s) 317, 1282, 1407, 1617, 2000, 2461, 3026
HpyF10VI GCNNNNNNNGC 3 cut(s) 101, 174, 1959
HspAI GCGC 3 cut(s) 301, 355, 2226
Kpn2I TCCGGA 1 cut(s) 265
KpnI GGTACC 1 cut(s) 330
Ksp22I TGATCA 1 cut(s) 3309
KspAI GTTAAC 1 cut(s) 1252
LguI GCTCTTC 1 cut(s) 102
LmnI GCTCC 4 cut(s) 173, 268, 2712, 2980
Lsp1109I GCAGC 9 cut(s) 74, 208, 285, 856, 1545, 2258, 2259, 2676, 3316
LweI GCATC 7 cut(s) 84, 217, 694, 790, 2798, 3124, 3145
MaeIII GTNAC 9 cut(s) 190, 247, 810, 1900, 2344, 2461, 3001, 3252, 3289
MfeI CAATTG 3 cut(s) 1486, 1694, 2829
MflI RGATCY 4 cut(s) 15, 1390, 1741, 2294
MhlI GDGCHC 2 cut(s) 205, 2218
MlsI TGGCCA 1 cut(s) 1866
MluNI TGGCCA 1 cut(s) 1866
MlyI GAGTC 7 cut(s) 590, 1071, 1812, 2139, 2907, 2932, 3260
MmeI TCCRAC 4 cut(s) 1437, 1636, 2186, 2863
Mox20I TGGCCA 1 cut(s) 1866
MroI TCCGGA 1 cut(s) 265
MroXI GAANNNNTTC 3 cut(s) 1299, 2437, 2805
MscI TGGCCA 1 cut(s) 1866
MslI CAYNNNNRTG 2 cut(s) 877, 2330
Msp20I TGGCCA 1 cut(s) 1866
MspA1I CMGCKG 1 cut(s) 646
MspI CCGG 1 cut(s) 266
MspR9I CCNGG 4 cut(s) 693, 1947, 2045, 2319
MunI CAATTG 3 cut(s) 1486, 1694, 2829
Mva1269I GAATGC 3 cut(s) 1506, 2275, 2585
MvaI CCWGG 4 cut(s) 693, 1947, 2045, 2319
MwoI GCNNNNNNNGC 3 cut(s) 101, 174, 1959
NcoI CCATGG 1 cut(s) 322
NdeI CATATG 1 cut(s) 1908
NheI GCTAGC 1 cut(s) 2953
NmeAIII GCCGAG 1 cut(s) 933
NmuCI GTSAC 7 cut(s) 247, 810, 1900, 2344, 2461, 3252, 3289
NspI RCATGY 6 cut(s) 712, 2038, 2253, 2387, 2704, 2891
PaeI GCATGC 1 cut(s) 2253
PagI TCATGA 1 cut(s) 3306
PciI ACATGT 2 cut(s) 708, 2887
PciSI GCTCTTC 1 cut(s) 102
PcsI WCGNNNNNNNCGW 1 cut(s) 211
PctI GAATGC 3 cut(s) 1506, 2275, 2585
PdmI GAANNNNTTC 3 cut(s) 1299, 2437, 2805
PfeI GAWTC 8 cut(s) 229, 367, 381, 1453, 1606, 2086, 2128, 2930
PflMI CCANNNNNTGG 3 cut(s) 849, 2168, 2984
PleI GAGTC 7 cut(s) 590, 1070, 1812, 2139, 2907, 2932, 3259
PpsI GAGTC 7 cut(s) 590, 1070, 1812, 2139, 2907, 2932, 3259
PscI ACATGT 2 cut(s) 708, 2887
Psp6I CCWGG 4 cut(s) 691, 1945, 2043, 2317
PspFI CCCAGC 2 cut(s) 164, 2852
PspGI CCWGG 4 cut(s) 691, 1945, 2043, 2317
PspPI GGNCC 6 cut(s) 54, 830, 1574, 1960, 2009, 2171
PstI CTGCAG 2 cut(s) 2763, 3334
PsuI RGATCY 4 cut(s) 15, 1390, 1741, 2294
PvuII CAGCTG 1 cut(s) 646
RsaI GTAC 8 cut(s) 328, 663, 944, 976, 1622, 2818, 3023, 3039
RsaNI GTAC 8 cut(s) 327, 662, 943, 975, 1621, 2817, 3022, 3038
RseI CAYNNNNRTG 2 cut(s) 877, 2330
SapI GCTCTTC 1 cut(s) 102
Sau96I GGNCC 6 cut(s) 54, 830, 1574, 1960, 2009, 2171
SchI GAGTC 7 cut(s) 590, 1071, 1812, 2139, 2907, 2932, 3260
ScrFI CCNGG 4 cut(s) 693, 1947, 2045, 2319
SduI GDGCHC 2 cut(s) 205, 2218
SfaNI GCATC 7 cut(s) 84, 217, 694, 790, 2798, 3124, 3145
SfcI CTRYAG 2 cut(s) 2759, 3330
SinI GGWCC 3 cut(s) 54, 830, 1574
SmiMI CAYNNNNRTG 2 cut(s) 877, 2330
SphI GCATGC 1 cut(s) 2253
SsiI CCGC 4 cut(s) 358, 1191, 1440, 3352
SspI AATATT 1 cut(s) 2626
StyD4I CCNGG 4 cut(s) 691, 1945, 2043, 2317
StyI CCWWGG 3 cut(s) 322, 1986, 2149
TaaI ACNGT 7 cut(s) 317, 1282, 1407, 1617, 2000, 2461, 3026
TaqI TCGA 6 cut(s) 26, 214, 584, 1338, 1686, 2357
TaqII GACCGA 1 cut(s) 818
TatI WGTACW 4 cut(s) 661, 942, 1620, 3021
TauI GCSGC 2 cut(s) 360, 3354
TfiI GAWTC 8 cut(s) 229, 367, 381, 1453, 1606, 2086, 2128, 2930
TscAI CASTG 3 cut(s) 904, 1519, 2337
TseFI GTSAC 7 cut(s) 247, 810, 1900, 2344, 2461, 3252, 3289
TseI GCWGC 9 cut(s) 62, 221, 298, 869, 1533, 2246, 2272, 2664, 3329
Tsp45I GTSAC 7 cut(s) 247, 810, 1900, 2344, 2461, 3252, 3289
TspGWI ACGGA 2 cut(s) 2825, 3005
TspRI CASTG 3 cut(s) 904, 1519, 2337
Van91I CCANNNNNTGG 3 cut(s) 849, 2168, 2984
VneI GTGCAC 2 cut(s) 201, 2214
VpaK11BI GGWCC 3 cut(s) 54, 830, 1574
XapI RAATTY 6 cut(s) 614, 925, 1789, 1840, 2157, 3118
XbaI TCTAGA 1 cut(s) 2098
XceI RCATGY 6 cut(s) 712, 2038, 2253, 2387, 2704, 2891
XcmI CCANNNNNNNNNTGG 2 cut(s) 846, 1809
XmiI GTMKAC 1 cut(s) 757
XmnI GAANNNNTTC 3 cut(s) 1299, 2437, 2805
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.