MD02G1291600.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Reverse (-)
34738275 .. 34741946
3672 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1291600.v1.1.491

Sequence Viewer

Length: 2658 bp
ATGTCCTCTTTGACAATTTTGGCTCTAGCCCAAAACAACTTAAGTGGTAGTTTACCAGACAATATATGCCAGCATCTTCCAAGCATTCAGCTGTTGAATTTGGCGGACAACCAATTTGATGGTCCACTTCCACACAAGTTATGGCAGTGCACAGAGCTTCTTAATTTGGCATTGGCCTTCAACAATTTCAATGGAAGCATACCAAGAACTATTGGGAACTTGACCCAGTTAACAGAGCTTTATATTTCCAACACCACCTTGACAGGTACTATACCGTATGAGGTTGGCGATCTTCAAAATCTACAGTATTTGTTACTCAATTTGAACAATCTCAATGGCCCCATTCCATCCACAATCTTCAATATGTCTAAGTTGATAGAAATTTCACTTGTTGGTAATCAACTCTCAGGCAGCCTCCCAGCAGACCTAGGCATTGGAATTCCAAACCTACAATGGATAGTAGTAGGAGTGAATAAACTCAGCGGAGTAATTCCCAACTCTATCTCTAATGCTTCAAAGCTTACTTACGTAGACATGACTGACAACTCTTTTTCTGGGTTTATTCCTAACAAGCTATGTGCCTTAACAAACCTTGAGTATCTTGGCTTATACCAGAATAATTTGACGGTTGACACTTCTACTCCAGAATTGAACATCCTTTCTTGTTTCACTAATCTTAGATATCTTAGGGTATTCATCCTGGGACGTAATCCATTAAACTCTCCTCTACCTATTTCCTTTCGGAATCTCTCTACATCGCTTCAAAAATTATCTTTAAGTGAAGGCAAATTGAAGGGTAGCATCCCCAATGATATTGGCAACTTGAGCAGCTTGATATATTTAAACCTGGAACTCAACCAATTGAGTGGGTTAATTCCAACTTCTATTGGAAGACTAGGGAGTCTCCAAGGTTTGTATTTGTTAGGTAACAAGTTGCAAGGACATATCCCCAATGAACTTTGTCAACTAACCAAACTAGCTGATTTAGTTTTAGGTTCTAATCAACTTTCTGGTTTTATACCGTCATGCTTTGGTAATCTAGCTGCAAATCTTAGAAAGCTATCATTAAAGTCCAATTTGTTAACTTCTACAATACCATCTACTTTGTGGGGGCTTGAACAAGTCTGGTACTTTGACTTGTCATCCAATATTCTAAACGGATCTCTGTCACAAGATATTGGTAAGTTGAAAGTTTTGTCATACTTGGATTTATCAAGCAACCATTTATTTGGTATTATACCAAGCAGCATTGGGGATCTTCTAGGTTTAGTTACTATGTCCTTGGCAAATAATTATTTAGAAGGCCCTATTCCTAGTTCATTCGGCAGCTTAAAAGGCTTGGTACACTTAAATTTATCCAAGAACAATTTGACTGAAGCAATTCCAAAGTCTCTAGAAGCACTCTTGAATCTGAAGTACCTGAATTTGTCTTTCAACAAACTCCAAGGGGAAATTCCAGAAGGCGGACCTTTCACAAACTTCTCTGCTCTATCATTTGTCTCGAATAAGGCGTTGTGTGGCGCAGCTCGACTCCATGTCCCACCATGCAAAAATAATACACTTCAACCAAGTTCAAGGAAAGCTACTTCGTCCAACTTGAAATATATTATTCCAGCAATAATAATAGCAACAGTATTCCTAGCCTTTGTAGCCATATTTATACTGCATAGGAAAAGGAAAGTTGAAGTTGCCACAGAGGCTACCTTGTTACCTCAATCTCTTTGGAGAAGAGTTTCACACCTTGAACTTCTAAGGGCGACAAATGGATTTAACAATAGCAACTTACTTGGAAGTGGGGGTTTTGGCTCAGTATATAAAGGGACATTGTCAGATGGGATAGATGTTGCATTGGATTTCAAAGGCTTGGTACTGAACTACATGCCTAATGGGAGCCTTGAGAAGTGGTTGTATTCTCAAAACTCTTCTTTTGATATCCTAAAGAGATTGGATATAATGGTAGATGTTGCATTGGCATTGGAATACCTACACCATGGTTATTCAGTACCAATTGTCCATTGTGATTTGAAGCCAAGCAATATACTACTAGATGATGATATGGTTGCACATGTTGCGGATTTTGGCATTGCAAAACTCTTGGGTTTAGGGGATTCCATGACCCGAACAATGACCCTAGCCACAGTTGGGTATATGGCTCCAGGTGATCTAATTTCTAGTTTAATATCTTTCAACCTTATACGTGTTGTCCTTAAAATCATGAATAACTGGACTTCTAACTTTCTTTGGCATATTAATATTGCAGAGTACGGAATGGATGGAATTGTTTTGACGCAAGGGGATGTATACAGTTTTGGTATTGTAGTCATGGAAACATTCACAAAAATGAAGCCTACAAATGAGATGTTTGTTGAGGAAATGAATCTAAAACAATGGGTTGCAAATTCACTATTATCAGAAGCAATAGCTGAAGTTGTGGATGCCAATCTACTGGTAGCAAAAGAGGAAGATCATGATTATGTGACTAAGATAGATTGTTTATCGTCGATTATGCGATTAGCTCTTGCTTGCTGTGCGGAGCCACTGGACGAGAGAATAAACATGCAAGAAGTTGTAGCCACGCTCAAAAAAACCAAAATCAAGTTTTTAAAGGATGTTGGAAGAAGAGTGTTGTTGAACCGTCCTCATGTTCAAGCACTTTGA

Protein Analysis

886

Amino Acids

96.91

Weight (kDa)

6.58

Isoelectric Point (pI)

30.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 148 - 208 5.7e-06 Leucine rich repeat
LRR_14 PF23598 270 - 359 1.4e-07 Leucine-rich repeat region
LRR_8 PF13855 325 - 383 2e-08 Leucine rich repeat
LRR_14 PF23598 360 - 481 9.5e-09 Leucine-rich repeat region
LRR_8 PF13855 399 - 457 2.2e-07 Leucine rich repeat
LRR_8 PF13855 423 - 481 1.7e-08 Leucine rich repeat
Pkinase PF00069 622 - 719 1.2e-17 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 622 - 719 2.6e-14 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 900
AccI GTMKAC 2 cut(s) 531, 2301
AciI CCGC 5 cut(s) 104, 483, 1464, 2072, 2531
AclWI GGATC 2 cut(s) 1168, 1263
AcsI RAATTY 7 cut(s) 97, 381, 438, 1351, 1423, 1452, 2398
AcuI CTGAAG 3 cut(s) 1395, 1433, 2445
AfaI GTAC 7 cut(s) 268, 1130, 1344, 1418, 1869, 2004, 2264
AfiI CCNNNNNNNGG 2 cut(s) 1463, 2142
AflII CTTAAG 1 cut(s) 40
AflIII ACRYGT 2 cut(s) 2065, 2197
AhdI GACNNNNNGTC 1 cut(s) 1535
AjnI CCWGG 3 cut(s) 699, 846, 2155
AjuI GAANNNNNNNTTGG 2 cut(s) 1437, 1469
Alw21I GWGCWC 1 cut(s) 152
Alw26I GTCTC 3 cut(s) 908, 1395, 1504
Alw44I GTGCAC 1 cut(s) 148
AlwI GGATC 2 cut(s) 1168, 1263
AoxI GGCC 3 cut(s) 174, 337, 1303
ApaLI GTGCAC 1 cut(s) 148
ApeKI GCWGC 6 cut(s) 411, 828, 1043, 1245, 1326, 1523
ApoI RAATTY 7 cut(s) 97, 381, 438, 1351, 1423, 1452, 2398
ArsI GACNNNNNNTTYG 2 cut(s) 98, 130
AseI ATTAAT 1 cut(s) 2250
Asp700I GAANNNNTTC 2 cut(s) 1380, 1732
AspA2I CCTAGG 1 cut(s) 427
AspLEI GCGC 1 cut(s) 1523
AspS9I GGNCC 4 cut(s) 122, 338, 1304, 1466
AsuHPI GGTGA 1 cut(s) 2171
AvaII GGWCC 2 cut(s) 122, 1466
AvrII CCTAGG 1 cut(s) 427
BaeGI GKGCMC 1 cut(s) 152
BbsI GAAGAC 1 cut(s) 898
Bbv12I GWGCWC 1 cut(s) 152
BbvI GCAGC 6 cut(s) 423, 840, 1030, 1257, 1338, 1535
BccI CCATC 5 cut(s) 113, 355, 1105, 1826, 2267
BciT130I CCWGG 3 cut(s) 701, 848, 2157
BcoDI GTCTC 3 cut(s) 908, 1395, 1504
BfmI CTRYAG 1 cut(s) 302
BfrI CTTAAG 1 cut(s) 40
BglI GCCNNNNNGGC 1 cut(s) 1697
BisI GCNGC 6 cut(s) 412, 829, 1044, 1246, 1327, 1524
BlnI CCTAGG 1 cut(s) 427
BlsI GCNGC 6 cut(s) 413, 830, 1045, 1247, 1328, 1525
Bme1390I CCNGG 3 cut(s) 701, 848, 2157
Bme18I GGWCC 2 cut(s) 122, 1466
BmeRI GACNNNNNGTC 1 cut(s) 1535
BmgT120I GGNCC 4 cut(s) 122, 338, 1304, 1466
BmiI GGNNCC 4 cut(s) 340, 1892, 2154, 2535
BmrFI CCNGG 3 cut(s) 701, 848, 2157
BmrI ACTGGG 1 cut(s) 220
BmsI GCATC 3 cut(s) 82, 810, 2425
BmuI ACTGGG 1 cut(s) 220
BpiI GAAGAC 1 cut(s) 898
BpmI CTGGAG 2 cut(s) 627, 2139
BpuEI CTTGAG 3 cut(s) 614, 844, 1916
BsaAI YACGTR 2 cut(s) 529, 2198
BsaBI GATNNNNATC 1 cut(s) 2439
BsaJI CCNNGG 6 cut(s) 427, 700, 907, 1281, 1444, 1990
BsaXI ACNNNNNCTCC 2 cut(s) 625, 655
Bsc4I CCNNNNNNNGG 2 cut(s) 1463, 2142
Bse1I ACTGG 4 cut(s) 226, 2228, 2451, 2544
Bse3DI GCAATG 1 cut(s) 2082
Bse8I GATNNNNATC 1 cut(s) 2439
BseBI CCWGG 3 cut(s) 701, 848, 2157
BseDI CCNNGG 6 cut(s) 427, 700, 907, 1281, 1444, 1990
BseGI GGATG 9 cut(s) 347, 654, 696, 801, 1142, 2278, 2302, 2440, 2614
BseJI GATNNNNATC 1 cut(s) 2439
BseLI CCNNNNNNNGG 2 cut(s) 1463, 2142
BseMI GCAATG 1 cut(s) 2082
BseMII CTCAG 3 cut(s) 420, 493, 1821
BseNI ACTGG 4 cut(s) 226, 2228, 2451, 2544
BseRI GAGGAG 1 cut(s) 714
BseSI GKGCMC 1 cut(s) 152
BseXI GCAGC 6 cut(s) 423, 840, 1030, 1257, 1338, 1535
BseYI CCCAGC 1 cut(s) 418
BshFI GGCC 3 cut(s) 176, 339, 1305
BsiHKAI GWGCWC 1 cut(s) 152
BslFI GGGAC 3 cut(s) 717, 1523, 1834
BslI CCNNNNNNNGG 2 cut(s) 1463, 2142
BsmAI GTCTC 3 cut(s) 908, 1395, 1504
BsmFI GGGAC 3 cut(s) 717, 1523, 1834
BsmI GAATGC 1 cut(s) 84
BsnI GGCC 3 cut(s) 176, 339, 1305
Bsp1286I GDGCHC 1 cut(s) 152
Bsp143I GATC 5 cut(s) 289, 1160, 1255, 2161, 2464
Bsp19I CCATGG 1 cut(s) 1990
BspACI CCGC 5 cut(s) 104, 483, 1464, 2072, 2531
BspANI GGCC 3 cut(s) 176, 339, 1305
BspCNI CTCAG 3 cut(s) 419, 492, 1820
BspHI TCATGA 2 cut(s) 2214, 2467
BspLI GGNNCC 4 cut(s) 340, 1892, 2154, 2535
BspPI GGATC 2 cut(s) 1168, 1263
BspTI CTTAAG 1 cut(s) 40
BsrDI GCAATG 1 cut(s) 2082
BsrI ACTGG 4 cut(s) 226, 2228, 2451, 2544
BssECI CCNNGG 6 cut(s) 427, 700, 907, 1281, 1444, 1990
BssMI GATC 5 cut(s) 289, 1160, 1255, 2161, 2464
BssNAI GTATAC 1 cut(s) 2302
BssT1I CCWWGG 5 cut(s) 427, 907, 1281, 1444, 1990
Bst1107I GTATAC 1 cut(s) 2302
Bst2UI CCWGG 3 cut(s) 701, 848, 2157
Bst4CI ACNGT 8 cut(s) 276, 306, 628, 1023, 1633, 2140, 2306, 2636
Bst6I CTCTTC 3 cut(s) 1723, 1927, 2614
BstAFI CTTAAG 1 cut(s) 40
BstAPI GCANNNNNTGC 1 cut(s) 2069
BstBAI YACGTR 2 cut(s) 529, 2198
BstC8I GCNNGC 2 cut(s) 71, 2524
BstDEI CTNAG 9 cut(s) 369, 406, 479, 677, 686, 1052, 1751, 1807, 2481
BstDSI CCRYGG 1 cut(s) 1990
BstF5I GGATG 9 cut(s) 347, 654, 696, 801, 1142, 2278, 2302, 2440, 2614
BstHHI GCGC 1 cut(s) 1523
BstKTI GATC 5 cut(s) 292, 1163, 1258, 2164, 2467
BstMAI GTCTC 3 cut(s) 908, 1395, 1504
BstMBI GATC 5 cut(s) 289, 1160, 1255, 2161, 2464
BstMWI GCNNNNNNNGC 6 cut(s) 825, 1335, 1649, 1697, 2069, 2528
BstNI CCWGG 3 cut(s) 701, 848, 2157
BstNSI RCATGY 3 cut(s) 1882, 2069, 2560
BstSCI CCNGG 3 cut(s) 699, 846, 2155
BstSFI CTRYAG 1 cut(s) 302
BstSLI GKGCMC 1 cut(s) 152
BstSNI TACGTA 1 cut(s) 529
BstV1I GCAGC 6 cut(s) 423, 840, 1030, 1257, 1338, 1535
BstV2I GAAGAC 1 cut(s) 898
BstX2I RGATCY 2 cut(s) 1160, 1255
BstXI CCANNNNNNTGG 4 cut(s) 119, 866, 1229, 2446
BstYI RGATCY 2 cut(s) 1160, 1255
BstZ17I GTATAC 1 cut(s) 2302
BsuRI GGCC 3 cut(s) 176, 339, 1305
BtgI CCRYGG 1 cut(s) 1990
BtgZI GCGATG 1 cut(s) 741
BtsCI GGATG 9 cut(s) 347, 654, 696, 801, 1142, 2278, 2302, 2440, 2614
BtsI GCAGTG 1 cut(s) 152
BtsIMutI CAGTG 2 cut(s) 152, 2537
Cac8I GCNNGC 2 cut(s) 71, 2524
CciI TCATGA 2 cut(s) 2214, 2467
CfoI GCGC 1 cut(s) 1523
Cfr13I GGNCC 4 cut(s) 122, 338, 1304, 1466
CseI GACGC 1 cut(s) 2296
Csp6I GTAC 7 cut(s) 267, 1129, 1343, 1417, 1868, 2003, 2263
CspCI CAANNNNNGTGG 2 cut(s) 25, 60
CviQI GTAC 7 cut(s) 267, 1129, 1343, 1417, 1868, 2003, 2263
DdeI CTNAG 9 cut(s) 369, 406, 479, 677, 686, 1052, 1751, 1807, 2481
DpnI GATC 5 cut(s) 291, 1162, 1257, 2163, 2466
DpnII GATC 5 cut(s) 289, 1160, 1255, 2161, 2464
DraI TTTAAA 2 cut(s) 843, 2604
DrdI GACNNNNNNGTC 1 cut(s) 900
DriI GACNNNNNGTC 1 cut(s) 1535
DseDI GACNNNNNNGTC 1 cut(s) 900
Eam1104I CTCTTC 3 cut(s) 1723, 1927, 2614
Eam1105I GACNNNNNGTC 1 cut(s) 1535
EarI CTCTTC 3 cut(s) 1723, 1927, 2614
EciI GGCGGA 2 cut(s) 119, 1479
Eco105I TACGTA 1 cut(s) 529
Eco130I CCWWGG 5 cut(s) 427, 907, 1281, 1444, 1990
Eco32I GATATC 2 cut(s) 683, 1933
Eco47I GGWCC 2 cut(s) 122, 1466
Eco57I CTGAAG 3 cut(s) 1395, 1433, 2445
EcoO109I RGGNCCY 1 cut(s) 1304
EcoRI GAATTC 1 cut(s) 438
EcoRII CCWGG 3 cut(s) 699, 846, 2155
EcoRV GATATC 2 cut(s) 683, 1933
EcoT14I CCWWGG 5 cut(s) 427, 907, 1281, 1444, 1990
ErhI CCWWGG 5 cut(s) 427, 907, 1281, 1444, 1990
FaqI GGGAC 3 cut(s) 717, 1523, 1834
FblI GTMKAC 2 cut(s) 531, 2301
Fnu4HI GCNGC 6 cut(s) 412, 829, 1044, 1246, 1327, 1524
FokI GGATG 9 cut(s) 334, 641, 683, 788, 1129, 2285, 2309, 2447, 2621
Fsp4HI GCNGC 6 cut(s) 412, 829, 1044, 1246, 1327, 1524
GlaI GCGC 1 cut(s) 1522
GluI GCNGC 6 cut(s) 412, 829, 1044, 1246, 1327, 1524
GsaI CCCAGC 1 cut(s) 422
GsuI CTGGAG 2 cut(s) 627, 2139
HaeIII GGCC 3 cut(s) 176, 339, 1305
HgaI GACGC 1 cut(s) 2296
HhaI GCGC 1 cut(s) 1523
Hin6I GCGC 1 cut(s) 1521
HinP1I GCGC 1 cut(s) 1521
HincII GTYRAC 4 cut(s) 231, 631, 965, 1083
HindII GTYRAC 4 cut(s) 231, 631, 965, 1083
HindIII AAGCTT 1 cut(s) 518
HinfI GANTC 6 cut(s) 745, 901, 1408, 1530, 2108, 2377
HpaI GTTAAC 2 cut(s) 231, 1083
HphI GGTGA 1 cut(s) 2171
Hpy188I TCNGA 4 cut(s) 744, 1413, 1831, 2413
Hpy188III TCNNGA 7 cut(s) 644, 1394, 1405, 1457, 1501, 2215, 2468
Hpy99I CGWCG 1 cut(s) 2503
HpyAV CCTTC 5 cut(s) 187, 776, 787, 1295, 1454
HpyCH4III ACNGT 8 cut(s) 276, 306, 628, 1023, 1633, 2140, 2306, 2636
HpyCH4IV ACGT 3 cut(s) 528, 706, 2197
HpyF10VI GCNNNNNNNGC 6 cut(s) 825, 1335, 1649, 1697, 2069, 2528
HpyF3I CTNAG 9 cut(s) 369, 406, 479, 677, 686, 1052, 1751, 1807, 2481
HpySE526I ACGT 3 cut(s) 528, 706, 2197
HspAI GCGC 1 cut(s) 1521
KspAI GTTAAC 2 cut(s) 231, 1083
Kzo9I GATC 5 cut(s) 289, 1160, 1255, 2161, 2464
LmnI GCTCC 3 cut(s) 1890, 2158, 2533
Lsp1109I GCAGC 6 cut(s) 423, 840, 1030, 1257, 1338, 1535
LweI GCATC 3 cut(s) 82, 810, 2425
MaeII ACGT 3 cut(s) 528, 706, 2197
MaeIII GTNAC 6 cut(s) 312, 926, 1167, 1270, 1707, 2476
MalI GATC 5 cut(s) 291, 1162, 1257, 2163, 2466
MboI GATC 5 cut(s) 289, 1160, 1255, 2161, 2464
MfeI CAATTG 2 cut(s) 860, 2007
MflI RGATCY 2 cut(s) 1160, 1255
MhlI GDGCHC 1 cut(s) 152
MlyI GAGTC 2 cut(s) 910, 1524
MmeI TCCRAC 4 cut(s) 273, 902, 1617, 2593
MnlI CCTC 9 cut(s) 16, 274, 425, 735, 1690, 1722, 2362, 2452, 2649
MroXI GAANNNNTTC 2 cut(s) 1380, 1732
MslI CAYNNNNRTG 2 cut(s) 2339, 2472
MspA1I CMGCKG 2 cut(s) 91, 483
MspCI CTTAAG 1 cut(s) 40
MspR9I CCNGG 3 cut(s) 701, 848, 2157
MunI CAATTG 2 cut(s) 860, 2007
Mva1269I GAATGC 1 cut(s) 84
MvaI CCWGG 3 cut(s) 701, 848, 2157
MwoI GCNNNNNNNGC 6 cut(s) 825, 1335, 1649, 1697, 2069, 2528
NcoI CCATGG 1 cut(s) 1990
NdeII GATC 5 cut(s) 289, 1160, 1255, 2161, 2464
NlaIV GGNNCC 4 cut(s) 340, 1892, 2154, 2535
NmuCI GTSAC 2 cut(s) 1167, 2476
NspI RCATGY 3 cut(s) 1882, 2069, 2560
PagI TCATGA 2 cut(s) 2214, 2467
PciI ACATGT 1 cut(s) 2065
PcsI WCGNNNNNNNCGW 1 cut(s) 1508
PctI GAATGC 1 cut(s) 84
PdmI GAANNNNTTC 2 cut(s) 1380, 1732
PfeI GAWTC 4 cut(s) 745, 1408, 2108, 2377
PflFI GACNNNGTC 1 cut(s) 1825
PkrI GCNGC 6 cut(s) 413, 830, 1045, 1247, 1328, 1525
PleI GAGTC 2 cut(s) 909, 1524
PpsI GAGTC 2 cut(s) 909, 1524
Ppu21I YACGTR 2 cut(s) 529, 2198
PscI ACATGT 1 cut(s) 2065
PshBI ATTAAT 1 cut(s) 2250
Psp6I CCWGG 3 cut(s) 699, 846, 2155
PspFI CCCAGC 1 cut(s) 418
PspGI CCWGG 3 cut(s) 699, 846, 2155
PspN4I GGNNCC 4 cut(s) 340, 1892, 2154, 2535
PspPI GGNCC 4 cut(s) 122, 338, 1304, 1466
PsuI RGATCY 2 cut(s) 1160, 1255
PsyI GACNNNGTC 1 cut(s) 1825
PvuII CAGCTG 1 cut(s) 91
RsaI GTAC 7 cut(s) 268, 1130, 1344, 1418, 1869, 2004, 2264
RsaNI GTAC 7 cut(s) 267, 1129, 1343, 1417, 1868, 2003, 2263
RseI CAYNNNNRTG 2 cut(s) 2339, 2472
SatI GCNGC 6 cut(s) 412, 829, 1044, 1246, 1327, 1524
Sau3AI GATC 5 cut(s) 289, 1160, 1255, 2161, 2464
Sau96I GGNCC 4 cut(s) 122, 338, 1304, 1466
SchI GAGTC 2 cut(s) 910, 1524
ScrFI CCNGG 3 cut(s) 701, 848, 2157
SduI GDGCHC 1 cut(s) 152
SfaNI GCATC 3 cut(s) 82, 810, 2425
SfcI CTRYAG 1 cut(s) 302
SinI GGWCC 2 cut(s) 122, 1466
SmiMI CAYNNNNRTG 2 cut(s) 2339, 2472
SmlI CTYRAG 4 cut(s) 40, 593, 823, 1895
SmoI CTYRAG 4 cut(s) 40, 593, 823, 1895
SnaBI TACGTA 1 cut(s) 529
SsiI CCGC 5 cut(s) 104, 483, 1464, 2072, 2531
SspI AATATT 2 cut(s) 1150, 2254
StyD4I CCNGG 3 cut(s) 699, 846, 2155
StyI CCWWGG 5 cut(s) 427, 907, 1281, 1444, 1990
TaaI ACNGT 8 cut(s) 276, 306, 628, 1023, 1633, 2140, 2306, 2636
TaiI ACGT 3 cut(s) 531, 709, 2200
TaqI TCGA 3 cut(s) 1502, 1528, 2501
TfiI GAWTC 4 cut(s) 745, 1408, 2108, 2377
TscAI CASTG 2 cut(s) 152, 2544
TseFI GTSAC 2 cut(s) 1167, 2476
TseI GCWGC 6 cut(s) 411, 828, 1043, 1245, 1326, 1523
Tsp45I GTSAC 2 cut(s) 1167, 2476
TspDTI ATGAA 6 cut(s) 685, 969, 1308, 2231, 2357, 2390
TspGWI ACGGA 2 cut(s) 1173, 2280
TspRI CASTG 2 cut(s) 152, 2544
Tth111I GACNNNGTC 1 cut(s) 1825
Vha464I CTTAAG 1 cut(s) 40
VneI GTGCAC 1 cut(s) 148
VpaK11BI GGWCC 2 cut(s) 122, 1466
VspI ATTAAT 1 cut(s) 2250
XapI RAATTY 7 cut(s) 97, 381, 438, 1351, 1423, 1452, 2398
XbaI TCTAGA 1 cut(s) 1393
XceI RCATGY 3 cut(s) 1882, 2069, 2560
XcmI CCANNNNNNNNNTGG 3 cut(s) 138, 450, 1104
XmaJI CCTAGG 1 cut(s) 427
XmiI GTMKAC 2 cut(s) 531, 2301
XmnI GAANNNNTTC 2 cut(s) 1380, 1732
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.