Rw0G009590

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00373
Physical Location & Seq
Reverse (-)
40375 .. 45188
4814 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G009590.1

Sequence Viewer

Length: 3372 bp
ATGGAGAGAGTTACTTGGTTCTTCCTGATACACTTGATTTGTTGTGAGGCTATTTGCTGCTTAACTATGGCAACACAAACCAACCTTAACATTACCACAGATCGGTCTGCTCTTCTTGCTCTCAAAGCCCATATCACCAAAGACCCTCAAAACATGATACTCACCAACTGGTCAACCACCACCCCTGTTTGCAACTGGTTTGGAGTCACTTGTGGTGCACGCCATCATCGAGTTGCAAAGTTGAACCTCTCTTACTTTGGTCTCACAGGCACCATTCCCCCTAAGCTAGGTAACTTATCATTTTTGGTTGATCTGTACTTTAGAAATAACAGTTTTCATGGTACCTTGCCTCAGGAATTGGCTCGCCTGCACCGCTTAAAGTTTATTGACTTGGCACATAACGAGTTTACAGGAGTCATTCCATCATGGTTTGGGTCCTTGTCCAAACTTCAAATATTCAGTTTTTCTGGTAATCAACTTTCTGGCTCCATCCCAGCTACAATATTCAACTTATCTGCTCTGCAAATAATTGATCTGGGTTATAACCAACTCTCAGGTGGAATACCCAAAGAAATCGGGAACCTAACAATGTTGAAGGAGATCTACCTTGATAGTAATAATTTTGATGAAGAAATTCCAAATGAGATCGGCACCTTGAATCAGCTTGAAGTGTTGTTTGTGGAAAATAATGCCTTAAAAGGGCATATTCCTATGGTTGTCTTCAATATGTCATCTTTGACTACAATAACTTTTTATGGAAACAAGTTGAATGGTAGAATTCCTGACAATATATGTCAACATCTTCCAAATATTCAATCCTTGTATCTGTCTTACAATCAGTTTGATGGTCCGCTTCCCTCCAAGTTATGGCAATGCAAACAACTTCTTGAATTACAATTGGGGCGTAACAAGTTCAGTGGAAGAATACCCAAATATATTTGGAACTTAACCCAGATAGAGGAGATTTGGCTTGACACCAACAGCTTGACAGGTACCATACCATATGAGATTGGTTATCTTCCAAATTTAGACATATTGACGCTCCGTGAGAATAATTTAAATGGCCATATCCCATCCTCAATCTTCAATATCTCCACAATAAGAATATTAGATCTCGGCATGAATCAGCTTTCAGGTTGCCTCCCAGCAAACACAGGCCTTGGGCTTCCAAACCTAGAAGAGTTCATAGTAGGAGCGAATCATCTCAGTGGAGTAATCCCCAAATCCATCTCCAATGCTTCTGAGCTACGGAGTCTAGAGCCGGGCGATAACTTTTTTTCTGGCTTTATTCCAAGCACTCTGTGCCTCTTGACAAACCTTGAATGGCTCGCATTGTTTAGCAATAATTTGACCATTGATACCTCTACTCCAGAAGTTAATATTTTTTCTTGTCTGGCAAATCTTAGAAATTTGACATTTTTATCATTCTCAAACAATCCATTAAATGCCAAGTTTTCGATTTCCTTAAGTAATTTCTCTGCATCACTTCAAGGTCTTGGTTTTGAATCTTGCGGCATGAGAGGTACCATCCCTAGTGATATAGGAAACTTGAGTAGCTTGATATTGTTATCCATGGAAGTCAATCAATTGAGCGGGCCAATTCCAAGCTCAACGGGAAGACTACATAATCTTCAAGGTTTGTATATGGGTGATAACAGATTGCAAGGATACATTCCAGATGAACTTTGTCAACTAGAAGACTTAAGTGATTTGTATTTGGATAGGAATCAACTCTCTGGTTCTGTACCTTCCTGCTTGGGTAATCTAACAGCATCTCTAAGAACTCTATCCTTATCGTCCAATTTGTTGAATTCCACAATACCATCTTCCTTGTGGGGACTTACAGATATCTTGCAACTAGACTTGTCATCCAATTCTCTAATTGGACCTCTATTAGGTGGTGTTGGTAATTTGAAAGTTGCTACATACATAAATGTATCATATAACCAATTATCTGGTAGTATACCAAGCAACGTTGGGAGTTTACTGAATTTGATCAATCTCTCCTTAGCACATAATAGTCTAGAAGGCCCTATTCCAAGTTCCTTTGCTACCTGTTTAAGCTTAGTACTGTTGGATTTATCTCACAATAGTCTCTCTGGAGTGATTCCAAATTCTCTAGTAGCACTCTCATATCTCAAGTACTTGAATTTGTCTTTCAACATACTCCAAGGAGAAATTCCAACCGGCGGTCCATTCAAAAACTTCTCTGCTGAATCATTTATTTCCAACCGTGGACTCTGTGGTGCATCCCAATTTGAAGTTCCACCATGCAAAAGAAAAACTAGTATGTCTATCTTGAAATATGTTATTCCAGGGATCTTGTCAGCAATGCTTCTAGCGACCTTCATATTTTGGATGCTGATGTTACGCAGAAAAAAGAATGTGAAAGTTGCAGCACATACTATCTTGACGCCTCAAGTTTTATGGAGAAGAGTTTCATACCAAGATCTCCTACGTGCAACAGATGGATTTAGTGAAAGCAACTTACTTGGTATTGGTGGTTTTGGCTCAGTATATAAAGGAACATTGTCAGATGGGATAGAAGTTGCGATAAAGGTTTTCAATTTGGAGTTGGAAGGGGCATTTACAAGTTTTGAGGTTGAATGTGAAGTGCTAAGTAATGTTCGTCACCGAAATCTTGTCAAAGTCATCAGTTGCTGCAGTCAAATTGATTTCAAAGGTCTTGTATTGAATTACATGCCTAATGGGAGCCTTGAGAAGTGGTTGTACTCTCAGAATTCTTCTTTGAACATAATGCAAAGGTTGGATATAATGATAGATGTTGCATCGGCATTGGAGTACCTTCATCATGGTTATGAAGTACCTATTGTCCATTGTGATTTGAAGCCAAGCAACATCCTACTAGATGATGATATGGTTGCACATGTTGCTGATTTTGGTATTGCGAGACTCCTGGGTGGACGAGATTCTATGACTCAAACCATGACCCTAGCCACAATCGGGTATATTGCTCCAGAGTATGGAATGGAAGGAATAGTGACCAAAAGAGGAGATGTGTATAGTTTTGGTATTGTAGTGATGGAAACATTTACAAGAAAGAAACCAACCGATGAGATCTTCGTTGGGGACATGAGATTCAATCATTGGGTTGCAAGTGTTCTAGTTGCAGATGCGATAGCTGATTTTGTGGATCCTACTTTACTTAAAACTGAGGAGGATCATGACTTCGTGAGCAAGAGGGAGTGCTTATCATCCATTATGAGATTAGCTATTGCTTGTTCAGCAGAATCACCGGAAGAGAGGGTAAACATGCAGGAGGCTGTAGCCACGCTTAAAACAATCAAGATCAAGTTTTCTAAGGACTCTGCTGCAGAAGGTGTGGTGTTGAACCGTCGTCCTGTTTCATAA

Protein Analysis

1123

Amino Acids

123.74

Weight (kDa)

5.76

Isoelectric Point (pI)

35.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 33 - 71 2.8e-11 Leucine rich repeat N-terminal domain
LRR_8 PF13855 129 - 184 5.7e-09 Leucine rich repeat
LRR_14 PF23598 168 - 250 7e-07 Leucine-rich repeat region
LRR_8 PF13855 221 - 281 3.5e-06 Leucine rich repeat
LRR_14 PF23598 336 - 530 1.5e-06 Leucine-rich repeat region
LRR_14 PF23598 488 - 622 8.9e-07 Leucine-rich repeat region
LRR_8 PF13855 664 - 721 2.7e-07 Leucine rich repeat
Pkinase PF00069 826 - 1097 1.4e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 829 - 1098 4.6e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 543
Acc65I GGTACC 3 cut(s) 341, 992, 1523
AccB1I GGYRCC 5 cut(s) 269, 341, 650, 992, 1523
AccB7I CCANNNNNTGG 2 cut(s) 867, 2984
AccBSI CCGCTC 1 cut(s) 1593
AccI GTMKAC 1 cut(s) 1963
AciI CCGC 5 cut(s) 373, 851, 1512, 1593, 2190
AclI AACGTT 1 cut(s) 1974
AclWI GGATC 4 cut(s) 2327, 3149, 3162, 3189
AcoI YGGCCR 1 cut(s) 1063
AcyI GRCGYC 1 cut(s) 2414
AdeI CACNNNGTG 1 cut(s) 1302
AfiI CCNNNNNNNGG 9 cut(s) 102, 287, 699, 867, 958, 1895, 2189, 2964, 2984
AflII CTTAAG 2 cut(s) 1465, 1702
AflIII ACRYGT 1 cut(s) 2887
AhlI ACTAGT 1 cut(s) 2285
AjnI CCWGG 2 cut(s) 2314, 2916
AjuI GAANNNNNNNTTGG 4 cut(s) 2163, 2195, 2247, 2279
Alw21I GWGCWC 1 cut(s) 220
Alw26I GTCTC 3 cut(s) 266, 2099, 2905
Alw44I GTGCAC 1 cut(s) 216
AlwI GGATC 4 cut(s) 2327, 3149, 3162, 3189
AlwNI CAGNNNCTG 1 cut(s) 2661
AoxI GGCC 4 cut(s) 1063, 1156, 1595, 2029
ApaLI GTGCAC 1 cut(s) 216
ApeKI GCWGC 4 cut(s) 57, 2396, 2661, 3332
Asp700I GAANNNNTTC 2 cut(s) 633, 2437
Asp718I GGTACC 3 cut(s) 341, 992, 1523
AspS9I GGNCC 6 cut(s) 435, 848, 1595, 1886, 2030, 2192
AsuC2I CCSGG 1 cut(s) 1263
AsuHPI GGTGA 5 cut(s) 127, 154, 1661, 2624, 3246
AvaII GGWCC 4 cut(s) 435, 848, 1886, 2192
AxyI CCTNAGG 1 cut(s) 351
BaeGI GKGCMC 1 cut(s) 220
BalI TGGCCA 1 cut(s) 1065
BamHI GGATCC 1 cut(s) 3154
BanI GGYRCC 5 cut(s) 269, 341, 650, 992, 1523
BarI GAAGNNNNNNTAC 4 cut(s) 587, 619, 2714, 2746
BbsI GAAGAC 3 cut(s) 712, 1624, 1704
Bbv12I GWGCWC 1 cut(s) 220
BbvI GCAGC 4 cut(s) 44, 2408, 2648, 3319
BciT130I CCWGG 2 cut(s) 2316, 2918
BciVI GTATCC 1 cut(s) 1661
BclI TGATCA 1 cut(s) 1995
BcnI CCSGG 1 cut(s) 1263
BcoDI GTCTC 3 cut(s) 266, 2099, 2905
BcuI ACTAGT 1 cut(s) 2285
BfmI CTRYAG 3 cut(s) 2662, 3285, 3333
BfrI CTTAAG 2 cut(s) 1465, 1702
BfuI GTATCC 1 cut(s) 1661
BglII AGATCT 4 cut(s) 600, 1111, 2449, 3078
BisI GCNGC 5 cut(s) 58, 1513, 2397, 2662, 3333
BlsI GCNGC 5 cut(s) 59, 1514, 2398, 2663, 3334
BmcAI AGTACT 2 cut(s) 2070, 2144
Bme1390I CCNGG 3 cut(s) 1263, 2316, 2918
Bme18I GGWCC 4 cut(s) 435, 848, 1886, 2192
BmgT120I GGNCC 6 cut(s) 435, 848, 1595, 1886, 2030, 2192
BmrFI CCNGG 3 cut(s) 1263, 2316, 2918
BmsI GCATC 6 cut(s) 1490, 1781, 2258, 2349, 2798, 3124
BpiI GAAGAC 3 cut(s) 712, 1624, 1704
BpmI CTGGAG 3 cut(s) 1353, 2121, 2961
Bpu10I CCTNAGC 2 cut(s) 282, 2008
BpuEI CTTGAG 4 cut(s) 1570, 2123, 2403, 2738
BpuMI CCSGG 1 cut(s) 1263
BsaAI YACGTR 1 cut(s) 2459
BsaBI GATNNNNATC 1 cut(s) 1725
BsaHI GRCGYC 1 cut(s) 2414
BsaI GGTCTC 1 cut(s) 266
BsaJI CCNNGG 6 cut(s) 1159, 1572, 2170, 2233, 2315, 2917
BsaWI WCCGGW 1 cut(s) 3256
BsaXI ACNNNNNCTCC 2 cut(s) 1351, 1381
Bsc4I CCNNNNNNNGG 9 cut(s) 102, 287, 699, 867, 958, 1895, 2189, 2964, 2984
Bse118I RCCGGY 1 cut(s) 2186
Bse1I ACTGG 2 cut(s) 173, 200
Bse21I CCTNAGG 1 cut(s) 351
Bse3DI GCAATG 2 cut(s) 878, 2337
Bse8I GATNNNNATC 1 cut(s) 1725
BseBI CCWGG 2 cut(s) 2316, 2918
BseDI CCNNGG 6 cut(s) 1159, 1572, 2170, 2233, 2315, 2917
BseGI GGATG 8 cut(s) 489, 1073, 1527, 1868, 2249, 2364, 2859, 3215
BseJI GATNNNNATC 1 cut(s) 1725
BseLI CCNNNNNNNGG 9 cut(s) 102, 287, 699, 867, 958, 1895, 2189, 2964, 2984
BseMI GCAATG 2 cut(s) 878, 2337
BseMII CTCAG 7 cut(s) 365, 567, 1219, 1233, 2526, 2750, 3165
BseNI ACTGG 2 cut(s) 173, 200
BseRI GAGGAG 3 cut(s) 974, 3027, 3191
BseSI GKGCMC 1 cut(s) 220
BseXI GCAGC 4 cut(s) 44, 2408, 2648, 3319
BseYI CCCAGC 2 cut(s) 493, 1144
BsgI GTGCAG 1 cut(s) 353
BshFI GGCC 4 cut(s) 1065, 1158, 1597, 2031
BshNI GGYRCC 5 cut(s) 269, 341, 650, 992, 1523
BsiHKAI GWGCWC 1 cut(s) 220
BsiSI CCGG 3 cut(s) 1262, 2187, 3257
BslFI GGGAC 2 cut(s) 1851, 3104
BslI CCNNNNNNNGG 9 cut(s) 102, 287, 699, 867, 958, 1895, 2189, 2964, 2984
BsmAI GTCTC 3 cut(s) 266, 2099, 2905
BsmFI GGGAC 2 cut(s) 1851, 3104
BsnI GGCC 4 cut(s) 1065, 1158, 1597, 2031
Bso31I GGTCTC 1 cut(s) 266
Bsp1286I GDGCHC 1 cut(s) 220
Bsp19I CCATGG 1 cut(s) 1572
BspACI CCGC 5 cut(s) 373, 851, 1512, 1593, 2190
BspANI GGCC 4 cut(s) 1065, 1158, 1597, 2031
BspCNI CTCAG 7 cut(s) 364, 566, 1218, 1234, 2525, 2749, 3166
BspHI TCATGA 1 cut(s) 3184
BspMAI CTGCAG 2 cut(s) 2666, 3337
BspPI GGATC 4 cut(s) 2327, 3149, 3162, 3189
BspQI GCTCTTC 1 cut(s) 117
BspT107I GGYRCC 5 cut(s) 269, 341, 650, 992, 1523
BspTI CTTAAG 2 cut(s) 1465, 1702
BspTNI GGTCTC 1 cut(s) 266
BsrBI CCGCTC 1 cut(s) 1593
BsrDI GCAATG 2 cut(s) 878, 2337
BsrFI RCCGGY 1 cut(s) 2186
BsrI ACTGG 2 cut(s) 173, 200
BssAI RCCGGY 1 cut(s) 2186
BssECI CCNNGG 6 cut(s) 1159, 1572, 2170, 2233, 2315, 2917
BssNAI GTATAC 1 cut(s) 1964
BssNI GRCGYC 1 cut(s) 2414
BssT1I CCWWGG 3 cut(s) 1159, 1572, 2170
Bst1107I GTATAC 1 cut(s) 1964
Bst2UI CCWGG 2 cut(s) 2316, 2918
Bst4CI ACNGT 4 cut(s) 332, 2073, 2234, 3356
Bst6I CTCTTC 4 cut(s) 117, 1173, 2428, 3255
BstACI GRCGYC 1 cut(s) 2414
BstAFI CTTAAG 2 cut(s) 1465, 1702
BstAPI GCANNNNNTGC 2 cut(s) 1302, 2891
BstBAI YACGTR 1 cut(s) 2459
BstC8I GCNNGC 5 cut(s) 220, 364, 368, 1329, 1595
BstDSI CCRYGG 2 cut(s) 1572, 2233
BstENI CCTNNNNNAGG 2 cut(s) 285, 1893
BstF5I GGATG 8 cut(s) 489, 1073, 1527, 1868, 2249, 2364, 2859, 3215
BstMAI GTCTC 3 cut(s) 266, 2099, 2905
BstMWI GCNNNNNNNGC 6 cut(s) 116, 125, 372, 1302, 2891, 3245
BstNI CCWGG 2 cut(s) 2316, 2918
BstNSI RCATGY 3 cut(s) 2704, 2891, 3277
BstSCI CCNGG 3 cut(s) 1261, 2314, 2916
BstSFI CTRYAG 3 cut(s) 2662, 3285, 3333
BstSLI GKGCMC 1 cut(s) 220
BstV1I GCAGC 4 cut(s) 44, 2408, 2648, 3319
BstV2I GAAGAC 3 cut(s) 712, 1624, 1704
BstX2I RGATCY 6 cut(s) 600, 1111, 2319, 2449, 3078, 3154
BstXI CCANNNNNNTGG 1 cut(s) 1955
BstYI RGATCY 6 cut(s) 600, 1111, 2319, 2449, 3078, 3154
BstZ17I GTATAC 1 cut(s) 1964
Bsu36I CCTNAGG 1 cut(s) 351
BsuI GTATCC 1 cut(s) 1661
BsuRI GGCC 4 cut(s) 1065, 1158, 1597, 2031
BtgI CCRYGG 2 cut(s) 1572, 2233
BtsCI GGATG 8 cut(s) 489, 1073, 1527, 1868, 2249, 2364, 2859, 3215
BtsIMutI CAGTG 2 cut(s) 922, 1213
Cac8I GCNNGC 5 cut(s) 220, 364, 368, 1329, 1595
CaiI CAGNNNCTG 1 cut(s) 2661
CciI TCATGA 1 cut(s) 3184
Cfr10I RCCGGY 1 cut(s) 2186
Cfr13I GGNCC 6 cut(s) 435, 848, 1595, 1886, 2030, 2192
CseI GACGC 2 cut(s) 1048, 2422
CspCI CAANNNNNGTGG 2 cut(s) 898, 933
DraI TTTAAA 1 cut(s) 1059
DraIII CACNNNGTG 1 cut(s) 1302
EaeI YGGCCR 1 cut(s) 1063
Eam1104I CTCTTC 4 cut(s) 117, 1173, 2428, 3255
EarI CTCTTC 4 cut(s) 117, 1173, 2428, 3255
Eco130I CCWWGG 3 cut(s) 1159, 1572, 2170
Eco147I AGGCCT 1 cut(s) 1158
Eco31I GGTCTC 1 cut(s) 266
Eco32I GATATC 1 cut(s) 1849
Eco47I GGWCC 4 cut(s) 435, 848, 1886, 2192
Eco81I CCTNAGG 1 cut(s) 351
EcoNI CCTNNNNNAGG 2 cut(s) 285, 1893
EcoO109I RGGNCCY 2 cut(s) 435, 2030
EcoRI GAATTC 3 cut(s) 777, 1810, 2740
EcoRII CCWGG 2 cut(s) 2314, 2916
EcoRV GATATC 1 cut(s) 1849
EcoT14I CCWWGG 3 cut(s) 1159, 1572, 2170
ErhI CCWWGG 3 cut(s) 1159, 1572, 2170
FaqI GGGAC 2 cut(s) 1851, 3104
FauI CCCGC 1 cut(s) 1586
FauNDI CATATG 1 cut(s) 1003
FbaI TGATCA 1 cut(s) 1995
FblI GTMKAC 1 cut(s) 1963
Fnu4HI GCNGC 5 cut(s) 58, 1513, 2397, 2662, 3333
FokI GGATG 8 cut(s) 476, 1060, 1514, 1855, 2236, 2371, 2846, 3202
Fsp4HI GCNGC 5 cut(s) 58, 1513, 2397, 2662, 3333
GluI GCNGC 5 cut(s) 58, 1513, 2397, 2662, 3333
GsaI CCCAGC 2 cut(s) 497, 1148
GsuI CTGGAG 3 cut(s) 1353, 2121, 2961
HaeIII GGCC 4 cut(s) 1065, 1158, 1597, 2031
HapII CCGG 3 cut(s) 1262, 2187, 3257
HgaI GACGC 2 cut(s) 1048, 2422
Hin1I GRCGYC 1 cut(s) 2414
HincII GTYRAC 3 cut(s) 174, 797, 1691
HindII GTYRAC 3 cut(s) 174, 797, 1691
HindIII AAGCTT 1 cut(s) 2062
HpaII CCGG 3 cut(s) 1262, 2187, 3257
HphI GGTGA 5 cut(s) 127, 154, 1661, 2624, 3246
Hpy188I TCNGA 3 cut(s) 1243, 2536, 2739
Hpy99I CGWCG 1 cut(s) 3360
HpyAV CCTTC 8 cut(s) 589, 1758, 2021, 2356, 2573, 2816, 2987, 3332
HpyCH4III ACNGT 4 cut(s) 332, 2073, 2234, 3356
HpyCH4IV ACGT 2 cut(s) 1974, 2458
HpyF10VI GCNNNNNNNGC 6 cut(s) 116, 125, 372, 1302, 2891, 3245
HpySE526I ACGT 2 cut(s) 1974, 2458
Hsp92I GRCGYC 1 cut(s) 2414
KpnI GGTACC 3 cut(s) 345, 996, 1527
Ksp22I TGATCA 1 cut(s) 1995
LguI GCTCTTC 1 cut(s) 117
LmnI GCTCC 5 cut(s) 491, 1047, 1193, 2712, 2980
Lsp1109I GCAGC 4 cut(s) 44, 2408, 2648, 3319
LweI GCATC 6 cut(s) 1490, 1781, 2258, 2349, 2798, 3124
MaeII ACGT 2 cut(s) 1974, 2458
MaeIII GTNAC 7 cut(s) 10, 205, 290, 905, 2367, 2630, 3001
MbiI CCGCTC 1 cut(s) 1593
MfeI CAATTG 2 cut(s) 896, 1586
MflI RGATCY 6 cut(s) 600, 1111, 2319, 2449, 3078, 3154
MhlI GDGCHC 1 cut(s) 220
MlsI TGGCCA 1 cut(s) 1065
MluNI TGGCCA 1 cut(s) 1065
MlyI GAGTC 7 cut(s) 213, 423, 1261, 2232, 2907, 2932, 3320
MmeI TCCRAC 5 cut(s) 2055, 2207, 2253, 2556, 2748
Mox20I TGGCCA 1 cut(s) 1065
MroXI GAANNNNTTC 2 cut(s) 633, 2437
MscI TGGCCA 1 cut(s) 1065
MslI CAYNNNNRTG 2 cut(s) 1206, 2817
Msp20I TGGCCA 1 cut(s) 1065
MspCI CTTAAG 2 cut(s) 1465, 1702
MspI CCGG 3 cut(s) 1262, 2187, 3257
MspR9I CCNGG 3 cut(s) 1263, 2316, 2918
MunI CAATTG 2 cut(s) 896, 1586
MvaI CCWGG 2 cut(s) 2316, 2918
MwoI GCNNNNNNNGC 6 cut(s) 116, 125, 372, 1302, 2891, 3245
NciI CCSGG 1 cut(s) 1263
NcoI CCATGG 1 cut(s) 1572
NdeI CATATG 1 cut(s) 1003
NmeAIII GCCGAG 1 cut(s) 1095
NmuCI GTSAC 3 cut(s) 205, 2630, 3001
NspI RCATGY 3 cut(s) 2704, 2891, 3277
PagI TCATGA 1 cut(s) 3184
PceI AGGCCT 1 cut(s) 1158
PciI ACATGT 1 cut(s) 2887
PciSI GCTCTTC 1 cut(s) 117
PcsI WCGNNNNNNNCGW 1 cut(s) 226
PdmI GAANNNNTTC 2 cut(s) 633, 2437
PflMI CCANNNNNTGG 2 cut(s) 867, 2984
PkrI GCNGC 5 cut(s) 59, 1514, 2398, 2663, 3334
PleI GAGTC 7 cut(s) 212, 422, 1260, 2232, 2907, 2932, 3320
PpsI GAGTC 7 cut(s) 212, 422, 1260, 2232, 2907, 2932, 3320
Ppu21I YACGTR 1 cut(s) 2459
PpuMI RGGWCCY 1 cut(s) 435
PscI ACATGT 1 cut(s) 2887
PsiI TTATAA 1 cut(s) 543
Psp1406I AACGTT 1 cut(s) 1974
Psp5II RGGWCCY 1 cut(s) 435
Psp6I CCWGG 2 cut(s) 2314, 2916
PspFI CCCAGC 2 cut(s) 493, 1144
PspGI CCWGG 2 cut(s) 2314, 2916
PspPI GGNCC 6 cut(s) 435, 848, 1595, 1886, 2030, 2192
PspPPI RGGWCCY 1 cut(s) 435
PsrI GAACNNNNNNTAC 2 cut(s) 236, 268
PstI CTGCAG 2 cut(s) 2666, 3337
PstNI CAGNNNCTG 1 cut(s) 2661
PsuI RGATCY 6 cut(s) 600, 1111, 2319, 2449, 3078, 3154
RseI CAYNNNNRTG 2 cut(s) 1206, 2817
SapI GCTCTTC 1 cut(s) 117
SatI GCNGC 5 cut(s) 58, 1513, 2397, 2662, 3333
Sau96I GGNCC 6 cut(s) 435, 848, 1595, 1886, 2030, 2192
ScaI AGTACT 2 cut(s) 2070, 2144
SchI GAGTC 7 cut(s) 213, 423, 1261, 2232, 2907, 2932, 3320
ScrFI CCNGG 3 cut(s) 1263, 2316, 2918
SduI GDGCHC 1 cut(s) 220
SfaNI GCATC 6 cut(s) 1490, 1781, 2258, 2349, 2798, 3124
SfcI CTRYAG 3 cut(s) 2662, 3285, 3333
SinI GGWCC 4 cut(s) 435, 848, 1886, 2192
SmiI ATTTAAAT 1 cut(s) 1059
SmiMI CAYNNNNRTG 2 cut(s) 1206, 2817
SmlI CTYRAG 6 cut(s) 1465, 1549, 1702, 2138, 2418, 2717
SmoI CTYRAG 6 cut(s) 1465, 1549, 1702, 2138, 2418, 2717
SpeI ACTAGT 1 cut(s) 2285
SseBI AGGCCT 1 cut(s) 1158
SsiI CCGC 5 cut(s) 373, 851, 1512, 1593, 2190
SspI AATATT 5 cut(s) 456, 504, 811, 1107, 1381
StuI AGGCCT 1 cut(s) 1158
StyD4I CCNGG 3 cut(s) 1261, 2314, 2916
StyI CCWWGG 3 cut(s) 1159, 1572, 2170
SwaI ATTTAAAT 1 cut(s) 1059
TaaI ACNGT 4 cut(s) 332, 2073, 2234, 3356
TaiI ACGT 2 cut(s) 1977, 2461
TaqI TCGA 2 cut(s) 229, 1457
TaqII GACCGA 1 cut(s) 93
TatI WGTACW 4 cut(s) 315, 2068, 2142, 2730
TauI GCSGC 1 cut(s) 1515
TscAI CASTG 2 cut(s) 922, 1213
TseFI GTSAC 3 cut(s) 205, 2630, 3001
TseI GCWGC 4 cut(s) 57, 2396, 2661, 3332
Tsp45I GTSAC 3 cut(s) 205, 2630, 3001
TspGWI ACGGA 2 cut(s) 1034, 1264
TspRI CASTG 2 cut(s) 922, 1213
Van91I CCANNNNNTGG 2 cut(s) 867, 2984
Vha464I CTTAAG 2 cut(s) 1465, 1702
VneI GTGCAC 1 cut(s) 216
VpaK11BI GGWCC 4 cut(s) 435, 848, 1886, 2192
XagI CCTNNNNNAGG 2 cut(s) 285, 1893
XbaI TCTAGA 2 cut(s) 1255, 2023
XceI RCATGY 3 cut(s) 2704, 2891, 3277
XcmI CCANNNNNNNNNTGG 2 cut(s) 554, 1830
XmiI GTMKAC 1 cut(s) 1963
XmnI GAANNNNTTC 2 cut(s) 633, 2437
ZrmI AGTACT 2 cut(s) 2070, 2144
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.