Prupe.2G048900_v2.0.a1

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000058
Physical Location & Seq
Reverse (-)
5615871 .. 5624534
8664 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G048900.2

Sequence Viewer

Length: 3486 bp
ATGGAGAGACCTGGGTTCCTCTTGTCGAGAACATTGTTGCTGGTATACTCTGTTATATACATGGTCAACTTAACCGTAGCACTAGCAACAAAAACCATCACCACAGACCAATCTGCTCTTATTGCTCTTAAGGCTCATATCACTAGTGACCCTCAAAACATCTTGACTACCAACTGGTCTGCCAGTAAAACCTCCAATATTTGCAACTGGGTTGGCGTTACTTGCGGTGTACACCACCTTAGAGTCACAGCCTTGAATCTCTCCTTCATGGGTCTCACAGGCATCATTCCTCCCCACCTAGCCAACCTCTCATTTCTTGTTAGCCTAACCCTCCGAAATAATAGTTTCCATGGCAACTTGCCCCAAGAATTGGCTGCTTTGCGCCGATTGAAGTTGATTAACTTTGGATTCAACAATTTTATGGGAATCATTCCAGCATGGTTTGGGCACTTATCCAAACTTCGAACCCTTGGTTTGTATGGTAATCAGTTTTCAGGTTCCATACCCAATGCTATCTACAACTTATCTGCACTGCAAGTACTTGATCTTAGCAACAACCAGCTATCAGGTAGCATACCAAGAGAAATCGGGAAGTTAACAAAGTTGAAGGGGATATACCTTGCCTACAACAATTTTGAGGGTAAAATACCGAGAGAAATAGGGAACTTAACAATGCTGCTGGAGATATACCTGGACAACAACAATTTCAAAGAAATTCCAAACGAGATGGGCAGTTTAGATAAGTTGGAGAACTTGTTCGTGCAGTTTAATACCCTAAAAGGCACTCTTCCTGTGGCTCTATTCAATATGTCTTCTTTGACTAGTTTGGCTTTACATCTAAACAACTTGAATGGTAGTATTCCAGACAATGTATGTCAGCATCTTCCTCGTATTCAACTTCTTGATTTGACTGACAACAAATTTAGTGGTCCACTTCCCTCCAAATTATGGCAATGCCGAGAGATGCAAGTATTAGCGTTGAGCTCTAACAAATTCAGTGGAAGCATACCCAAAAATATTGGGAACTTAACCCAAATCACACAGCTTCATCTTGAGCTCAACAACTTGACAGGTGCTATACCACCAGAGATTGGCGGTCTTCGAAGTTTAGAGGTTTTTGTAGTCTATGGTAACAATCTAAATGGCCTGATCCCATCCACAATCTTCAATATGTCCATGATAAGAACAATATCGCTTGGTCTAAATCAGCTATCAGGTAGCCTCCCAGCAAACATAGGCGTTGGGGTTCCCAACTTGGAAAAGTTTGTTTTACCAGAAAATCAAGTCAGCGGAGTAATCCCCAACCTCTCCGATGCCTCTAAGCTCACCCATCTAGACATGGGTAGAAACTCATTTACTGGGTTCATTCCTAGCACACTATGTGCATTAACAAACCTTCAAGTCCTTGGCTTAGAGATGAATACTTTGACAATTGATATTTCTACTCCGGAAGCAAACATTCTCTCTTGCTTGGCTAATCTTAGAAATTTGGCGGCAATGTACTTGACAGGTAATCCGTTAAATGTCACAGTTCCTGTTTTCTTTGAGAATCTGTCTACATCATTGCAAGATCTTCGTTTAGCCCTTTGCAACATGAGGGGTGAAATTCCCAGTGAAATTAGTAACTTGAGCAGCTTGGCAGCCTTGGACCTGGGTTACAATCACTTGAGTGGACCAATTCCAGCTTCACTGGGAAGACTACGTAATCTGCAAGGTTTGTATTTGGATGAAAACAAGTTGCAAGGATATATCCCATACGAAATTTGTCAACTCGAAAACCTGGTCGACTTATTTTTGGGTGTCAATCAACTATTTGGTTCTATACCTCCCTGTTTGGGTAATTTAGCCACATCTCTAAGAAGTCTATCATTAGAGTCAAATTTGTTAAATTCCACAATACCATCAACCTTGTGGGAAGTAGCATTTATATTACACATAAACCTGTCATCCAATTCTCTTACTGGATCTCTATCAGATGATACTGGAAAATTAAAAGTTGTGACAGATATGGATTTATCAAATAACAATTTATCAGGTCGTATACCAAGCAACATCAAGGGTTTGAAAGATTTGGTTAATCTCTCGTTGGCAAATAATAATTTCCAAGGCCCTATTCCTAGTTCATTTGGCGACTTAGTGAGCCTGGAAATCTTGGACTTATCCAAAAACAATCTTTCTGGAGTGATTCCAAAGTCTCTAGAAAGACTCTTACACCTCAAGTATCTGAATTTGTCTTCCAACAGACTCCAAGGAGAAGTTCCAACCGGTGGACCTTTCAAAAACTTCTCTGCTCAATCATTTCTCTCGAATGATGCACTGTGTGGCGCACCCCGACTGAATATGTCACCATGCAAAAGCAGTACAAAACATAAACCCCGTTCCCGGAAAGTTGGTTTGTTCATCTTGAAATATATTATTCCAGGGATCATATCAGCAATACTCCTAGCGGTCTCCATATCGATGTTGATACTACACAAGAAAAGGAGCGTACCAGTTGTAATAGAGGCTACCTTGTCACCTCAACTTCTTTGGAGAAGAGTTTCACACCTTGAACTTCTTAGGGCGACAAACGGCTTTAATGAAAGAAACTTACTTGGAAGTGGGGGTTTTGGCTCAGTGTATAAAGGGACACTTTCAGATGGGATAGATGTTGCTGTAAAGGTTTTCAAGTTACAGCTAGAAGGGGGTTTCAAGAGTTTTGATAGGGAATGTGAAATGCTAAGCAAGATTCGTCATCGAAATCTTATAAAAGTCATCAGTTGTTGCAGTCAAACTGATTTCAAAGCCTTGGTACTGAACTACATGCCTAATGGGAGCCTTGAGAAGTGGTTGTATACTGAAAACTCTTCTTTGAGTATCTTACAGAGGATGAATATAATGGTAGATGTTTCATTGGCATTGGAATACCTACACCATGGTTATTCAATACCTATTGTACATTGCGATTTGAAGCCCAGCAATATACTACTAGATGATGATATGGTTGCACACGTTGCCGATTTTGGAATCGCAAAACTCTTGGGTGGAGGAGATTCTATGACCCAAACCATGACCTTAGCCACAGTTGGGTATATGGCTCCAGAGTATGGAATGGAAGGAATAGTTTCAACAAGAGGGGATGTTTACAGTTTTGGAATTGTAGTGATGGAAACATTCACAAGAAGGAAGCCAACAGATGAGATGTTTGTTGGGGAGATGAATTTCAAGCAATGGATTACAAAATCACTATTACCAGATGCAATAAAAGATGGAGTTGTGGATGATAATTTACTTGGGACAGAGCAGAATGATGATGATTTTGTGAGCAAGAGGGATTGCTTATCATCCATTATGAGATTAGCTCTCGCTTGCTGTGCAGAATCACCAGAAGAGAGGATAAGTATGAAAGAAGCTGTAGCCACACTCAAGAAAATCAAGACAAAGTTTCTGAAGGACGCTGCAGGAGGTGCTCTGTTAAACCGTCCTCTTGTTCAGCACTTCAATTAA

Protein Analysis

1162

Amino Acids

127.22

Weight (kDa)

8.26

Isoelectric Point (pI)

31.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2747
AccB7I CCANNNNNTGG 5 cut(s) 370, 948, 1091, 2267, 3086
AccI GTMKAC 5 cut(s) 45, 1556, 1785, 2041, 2834
AccIII TCCGGA 1 cut(s) 1447
AciI CCGC 5 cut(s) 225, 1095, 1290, 1493, 2447
AclWI GGATC 3 cut(s) 1144, 1972, 2432
AcuI CTGAAG 1 cut(s) 3449
AdeI CACNNNGTG 2 cut(s) 1382, 2321
AfaI GTAC 7 cut(s) 231, 540, 1502, 2362, 2490, 2793, 2937
AfiI CCNNNNNNNGG 8 cut(s) 370, 948, 1091, 1835, 2267, 2382, 3066, 3086
AflII CTTAAG 1 cut(s) 128
AflIII ACRYGT 1 cut(s) 2989
AgeI ACCGGT 1 cut(s) 2264
AhlI ACTAGT 2 cut(s) 143, 821
AjnI CCWGG 6 cut(s) 10, 690, 1650, 1779, 2142, 2419
AjuI GAANNNNNNNTTGG 6 cut(s) 1669, 1701, 2097, 2129, 2241, 2273
AleI CACNNNNGTG 1 cut(s) 1668
AloI GAACNNNNNNTCC 2 cut(s) 740, 772
Alw21I GWGCWC 3 cut(s) 986, 1059, 3451
Alw26I GTCTC 3 cut(s) 278, 2199, 2455
AlwI GGATC 3 cut(s) 1144, 1972, 2432
AlwNI CAGNNNCTG 1 cut(s) 1535
Aor13HI TCCGGA 1 cut(s) 1447
AoxI GGCC 2 cut(s) 1144, 2107
ApeKI GCWGC 5 cut(s) 374, 676, 1632, 1640, 3437
ArsI GACNNNNNNTTYG 2 cut(s) 1767, 1799
AsiGI ACCGGT 1 cut(s) 2264
Asp700I GAANNNNTTC 3 cut(s) 755, 2539, 3103
AspLEI GCGC 2 cut(s) 384, 2327
AspS9I GGNCC 5 cut(s) 929, 1648, 1673, 2108, 2270
AsuC2I CCSGG 1 cut(s) 2383
AsuHPI GGTGA 6 cut(s) 91, 1318, 1613, 2337, 2508, 3354
AsuII TTCGAA 2 cut(s) 463, 1102
AvaII GGWCC 4 cut(s) 929, 1648, 1673, 2270
BaeGI GKGCMC 1 cut(s) 450
BanII GRGCYC 2 cut(s) 986, 1059
BarI GAAGNNNNNNTAC 2 cut(s) 599, 631
BbsI GAAGAC 4 cut(s) 804, 1091, 1702, 2226
Bbv12I GWGCWC 3 cut(s) 986, 1059, 3451
BbvI GCAGC 5 cut(s) 361, 663, 1644, 1652, 3424
BccI CCATC 8 cut(s) 104, 721, 1162, 1338, 1909, 2633, 3139, 3242
BceAI ACGGC 1 cut(s) 2587
BcgI CGANNNNNNTGC 4 cut(s) 869, 903, 1556, 1590
BciT130I CCWGG 6 cut(s) 12, 692, 1652, 1781, 2144, 2421
BcnI CCSGG 1 cut(s) 2383
BcoDI GTCTC 3 cut(s) 278, 2199, 2455
BcuI ACTAGT 2 cut(s) 143, 821
BfmI CTRYAG 2 cut(s) 3393, 3438
BfrI CTTAAG 1 cut(s) 128
BglII AGATCT 1 cut(s) 1570
BisI GCNGC 6 cut(s) 375, 677, 1494, 1633, 1641, 3438
BlpI GCTNAGC 1 cut(s) 2720
BlsI GCNGC 6 cut(s) 376, 678, 1495, 1634, 1642, 3439
BmcAI AGTACT 1 cut(s) 540
Bme1390I CCNGG 7 cut(s) 12, 692, 1652, 1781, 2144, 2383, 2421
Bme18I GGWCC 4 cut(s) 929, 1648, 1673, 2270
BmgT120I GGNCC 5 cut(s) 929, 1648, 1673, 2108, 2270
BmiI GGNNCC 5 cut(s) 17, 499, 1248, 2816, 3078
BmrFI CCNGG 7 cut(s) 12, 692, 1652, 1781, 2144, 2383, 2421
BmrI ACTGGG 4 cut(s) 217, 1368, 1605, 1700
BmsI GCATC 6 cut(s) 291, 889, 954, 1303, 2302, 3226
BmuI ACTGGG 4 cut(s) 217, 1368, 1605, 1700
BpiI GAAGAC 4 cut(s) 804, 1091, 1702, 2226
BplI GAGNNNNNCTC 2 cut(s) 3325, 3357
BpmI CTGGAG 3 cut(s) 701, 2199, 3063
Bpu10I CCTNAGC 1 cut(s) 3055
Bpu1102I GCTNAGC 1 cut(s) 2720
Bpu14I TTCGAA 2 cut(s) 463, 1102
BpuEI CTTGAG 6 cut(s) 1073, 1648, 1687, 2201, 2840, 3389
BpuMI CCSGG 1 cut(s) 2383
Bsa29I ATCGAT 1 cut(s) 2459
BsaAI YACGTR 1 cut(s) 1703
BsaBI GATNNNNATC 1 cut(s) 1969
BsaI GGTCTC 2 cut(s) 278, 2455
BsaWI WCCGGW 2 cut(s) 1447, 2264
BsaXI ACNNNNNCTCC 2 cut(s) 740, 770
Bsc4I CCNNNNNNNGG 8 cut(s) 370, 948, 1091, 1835, 2267, 2382, 3066, 3086
Bse118I RCCGGY 1 cut(s) 2264
Bse1I ACTGG 9 cut(s) 179, 183, 212, 1363, 1611, 1695, 1966, 1987, 2492
Bse3DI GCAATG 5 cut(s) 959, 1503, 1562, 2938, 3215
Bse8I GATNNNNATC 1 cut(s) 1969
BseAI TCCGGA 1 cut(s) 1447
BseBI CCWGG 6 cut(s) 12, 692, 1652, 1781, 2144, 2421
BseCI ATCGAT 1 cut(s) 2459
BseGI GGATG 7 cut(s) 1154, 1732, 1946, 2874, 3124, 3265, 3323
BseJI GATNNNNATC 1 cut(s) 1969
BseLI CCNNNNNNNGG 8 cut(s) 370, 948, 1091, 1835, 2267, 2382, 3066, 3086
BseMI GCAATG 5 cut(s) 959, 1503, 1562, 2938, 3215
BseMII CTCAG 1 cut(s) 2628
BseNI ACTGG 9 cut(s) 179, 183, 212, 1363, 1611, 1695, 1966, 1987, 2492
BseRI GAGGAG 1 cut(s) 3042
BseSI GKGCMC 1 cut(s) 450
BseXI GCAGC 5 cut(s) 361, 663, 1644, 1652, 3424
BseYI CCCAGC 2 cut(s) 1225, 2954
BsgI GTGCAG 3 cut(s) 513, 782, 3375
BshFI GGCC 2 cut(s) 1146, 2109
BshTI ACCGGT 1 cut(s) 2264
BshVI ATCGAT 1 cut(s) 2459
BsiHKAI GWGCWC 3 cut(s) 986, 1059, 3451
BsiSI CCGG 3 cut(s) 1448, 2265, 2383
BslFI GGGAC 2 cut(s) 2641, 3289
BslI CCNNNNNNNGG 8 cut(s) 370, 948, 1091, 1835, 2267, 2382, 3066, 3086
BsmAI GTCTC 3 cut(s) 278, 2199, 2455
BsmFI GGGAC 2 cut(s) 2641, 3289
BsnI GGCC 2 cut(s) 1146, 2109
Bso31I GGTCTC 2 cut(s) 278, 2455
Bsp119I TTCGAA 2 cut(s) 463, 1102
Bsp1286I GDGCHC 4 cut(s) 450, 986, 1059, 3451
Bsp13I TCCGGA 1 cut(s) 1447
Bsp1407I TGTACA 2 cut(s) 229, 2935
Bsp143I GATC 5 cut(s) 544, 1149, 1570, 1964, 2424
Bsp1720I GCTNAGC 1 cut(s) 2720
Bsp19I CCATGG 2 cut(s) 349, 2914
BspACI CCGC 5 cut(s) 225, 1095, 1290, 1493, 2447
BspANI GGCC 2 cut(s) 1146, 2109
BspCNI CTCAG 1 cut(s) 2627
BspDI ATCGAT 1 cut(s) 2459
BspEI TCCGGA 1 cut(s) 1447
BspLI GGNNCC 5 cut(s) 17, 499, 1248, 2816, 3078
BspMAI CTGCAG 1 cut(s) 3442
BspPI GGATC 3 cut(s) 1144, 1972, 2432
BspT104I TTCGAA 2 cut(s) 463, 1102
BspTI CTTAAG 1 cut(s) 128
BspTNI GGTCTC 2 cut(s) 278, 2455
BsrDI GCAATG 5 cut(s) 959, 1503, 1562, 2938, 3215
BsrFI RCCGGY 1 cut(s) 2264
BsrGI TGTACA 2 cut(s) 229, 2935
BsrI ACTGG 9 cut(s) 179, 183, 212, 1363, 1611, 1695, 1966, 1987, 2492
BssAI RCCGGY 1 cut(s) 2264
BssMI GATC 5 cut(s) 544, 1149, 1570, 1964, 2424
BssNAI GTATAC 3 cut(s) 46, 2042, 2835
BssT1I CCWWGG 8 cut(s) 349, 469, 1405, 1644, 2104, 2248, 2787, 2914
Bst1107I GTATAC 3 cut(s) 46, 2042, 2835
Bst2UI CCWGG 6 cut(s) 12, 692, 1652, 1781, 2144, 2421
Bst4CI ACNGT 6 cut(s) 76, 1531, 2319, 3064, 3128, 3461
Bst6I CTCTTC 4 cut(s) 792, 2530, 2851, 3363
BstAFI CTTAAG 1 cut(s) 128
BstAPI GCANNNNNTGC 2 cut(s) 2993, 3446
BstAUI TGTACA 2 cut(s) 229, 2935
BstBAI YACGTR 1 cut(s) 1703
BstBI TTCGAA 2 cut(s) 463, 1102
BstC8I GCNNGC 1 cut(s) 3349
BstDSI CCRYGG 2 cut(s) 349, 2914
BstF5I GGATG 7 cut(s) 1154, 1732, 1946, 2874, 3124, 3265, 3323
BstHHI GCGC 2 cut(s) 384, 2327
BstKTI GATC 5 cut(s) 547, 1152, 1573, 1967, 2427
BstMAI GTCTC 3 cut(s) 278, 2199, 2455
BstMBI GATC 5 cut(s) 544, 1149, 1570, 1964, 2424
BstMWI GCNNNNNNNGC 6 cut(s) 122, 131, 222, 2993, 3353, 3446
BstNI CCWGG 6 cut(s) 12, 692, 1652, 1781, 2144, 2421
BstNSI RCATGY 1 cut(s) 2806
BstSCI CCNGG 7 cut(s) 10, 690, 1650, 1779, 2142, 2381, 2419
BstSFI CTRYAG 2 cut(s) 3393, 3438
BstSLI GKGCMC 1 cut(s) 450
BstSNI TACGTA 1 cut(s) 1703
BstV1I GCAGC 5 cut(s) 361, 663, 1644, 1652, 3424
BstV2I GAAGAC 4 cut(s) 804, 1091, 1702, 2226
BstX2I RGATCY 2 cut(s) 1570, 1964
BstYI RGATCY 2 cut(s) 1570, 1964
BstZ17I GTATAC 3 cut(s) 46, 2042, 2835
Bsu15I ATCGAT 1 cut(s) 2459
BsuRI GGCC 2 cut(s) 1146, 2109
BsuTUI ATCGAT 1 cut(s) 2459
BtgI CCRYGG 2 cut(s) 349, 2914
BtsCI GGATG 7 cut(s) 1154, 1732, 1946, 2874, 3124, 3265, 3323
BtsI GCAGTG 1 cut(s) 530
BtsIMutI CAGTG 6 cut(s) 530, 1003, 1618, 1688, 2315, 2622
Cac8I GCNNGC 1 cut(s) 3349
CaiI CAGNNNCTG 1 cut(s) 1535
CfoI GCGC 2 cut(s) 384, 2327
Cfr10I RCCGGY 1 cut(s) 2264
Cfr13I GGNCC 5 cut(s) 929, 1648, 1673, 2108, 2270
ClaI ATCGAT 1 cut(s) 2459
CseI GACGC 1 cut(s) 3443
CsiI ACCWGGT 1 cut(s) 1779
Csp6I GTAC 7 cut(s) 230, 539, 1501, 2361, 2489, 2792, 2936
CspAI ACCGGT 1 cut(s) 2264
CspCI CAANNNNNGTGG 4 cut(s) 907, 942, 979, 1014
CviQI GTAC 7 cut(s) 230, 539, 1501, 2361, 2489, 2792, 2936
DpnI GATC 5 cut(s) 546, 1151, 1572, 1966, 2426
DpnII GATC 5 cut(s) 544, 1149, 1570, 1964, 2424
DraIII CACNNNGTG 2 cut(s) 1382, 2321
Eam1104I CTCTTC 4 cut(s) 792, 2530, 2851, 3363
EarI CTCTTC 4 cut(s) 792, 2530, 2851, 3363
Ecl136II GAGCTC 2 cut(s) 984, 1057
Eco105I TACGTA 1 cut(s) 1703
Eco130I CCWWGG 8 cut(s) 349, 469, 1405, 1644, 2104, 2248, 2787, 2914
Eco24I GRGCYC 2 cut(s) 986, 1059
Eco31I GGTCTC 2 cut(s) 278, 2455
Eco47I GGWCC 4 cut(s) 929, 1648, 1673, 2270
Eco53kI GAGCTC 2 cut(s) 984, 1057
Eco57I CTGAAG 1 cut(s) 3449
EcoICRI GAGCTC 2 cut(s) 984, 1057
EcoO109I RGGNCCY 1 cut(s) 2108
EcoRII CCWGG 6 cut(s) 10, 690, 1650, 1779, 2142, 2419
EcoT14I CCWWGG 8 cut(s) 349, 469, 1405, 1644, 2104, 2248, 2787, 2914
EcoT38I GRGCYC 2 cut(s) 986, 1059
ErhI CCWWGG 8 cut(s) 349, 469, 1405, 1644, 2104, 2248, 2787, 2914
FalI AAGNNNNNCTT 4 cut(s) 771, 803, 2616, 2648
FaqI GGGAC 2 cut(s) 2641, 3289
FblI GTMKAC 5 cut(s) 45, 1556, 1785, 2041, 2834
Fnu4HI GCNGC 6 cut(s) 375, 677, 1494, 1633, 1641, 3438
FokI GGATG 7 cut(s) 1141, 1739, 1933, 2881, 3131, 3272, 3310
FriOI GRGCYC 2 cut(s) 986, 1059
Fsp4HI GCNGC 6 cut(s) 375, 677, 1494, 1633, 1641, 3438
GlaI GCGC 2 cut(s) 383, 2326
GluI GCNGC 6 cut(s) 375, 677, 1494, 1633, 1641, 3438
GsaI CCCAGC 2 cut(s) 1229, 2958
GsuI CTGGAG 3 cut(s) 701, 2199, 3063
HaeIII GGCC 2 cut(s) 1146, 2109
HapII CCGG 3 cut(s) 1448, 2265, 2383
HgaI GACGC 1 cut(s) 3443
HhaI GCGC 2 cut(s) 384, 2327
Hin6I GCGC 2 cut(s) 382, 2325
HinP1I GCGC 2 cut(s) 382, 2325
HincII GTYRAC 4 cut(s) 67, 597, 1769, 1786
HindII GTYRAC 4 cut(s) 67, 597, 1769, 1786
HpaI GTTAAC 1 cut(s) 597
HpaII CCGG 3 cut(s) 1448, 2265, 2383
HphI GGTGA 6 cut(s) 91, 1318, 1613, 2337, 2508, 3354
Hpy188I TCNGA 6 cut(s) 335, 1312, 1975, 2226, 2638, 3429
HpyAV CCTTC 7 cut(s) 274, 601, 1406, 2675, 3089, 3156, 3424
HpyCH4III ACNGT 6 cut(s) 76, 1531, 2319, 3064, 3128, 3461
HpyCH4IV ACGT 2 cut(s) 1702, 2991
HpyF10VI GCNNNNNNNGC 6 cut(s) 122, 131, 222, 2993, 3353, 3446
HpySE526I ACGT 2 cut(s) 1702, 2991
HspAI GCGC 2 cut(s) 382, 2325
Kpn2I TCCGGA 1 cut(s) 1447
KspAI GTTAAC 1 cut(s) 597
Kzo9I GATC 5 cut(s) 544, 1149, 1570, 1964, 2424
LmnI GCTCC 3 cut(s) 2484, 2814, 3082
Lsp1109I GCAGC 5 cut(s) 361, 663, 1644, 1652, 3424
LweI GCATC 6 cut(s) 291, 889, 954, 1303, 2302, 3226
MabI ACCWGGT 1 cut(s) 1779
MaeII ACGT 2 cut(s) 1702, 2991
MalI GATC 5 cut(s) 546, 1151, 1572, 1966, 2426
MboI GATC 5 cut(s) 544, 1149, 1570, 1964, 2424
MfeI CAATTG 1 cut(s) 1431
MflI RGATCY 2 cut(s) 1570, 1964
MhlI GDGCHC 4 cut(s) 450, 986, 1059, 3451
MlyI GAGTC 4 cut(s) 252, 1883, 2199, 2238
MmeI TCCRAC 3 cut(s) 726, 2262, 2285
MroI TCCGGA 1 cut(s) 1447
MroXI GAANNNNTTC 3 cut(s) 755, 2539, 3103
MslI CAYNNNNRTG 2 cut(s) 1668, 2459
MspA1I CMGCKG 1 cut(s) 1290
MspCI CTTAAG 1 cut(s) 128
MspI CCGG 3 cut(s) 1448, 2265, 2383
MspR9I CCNGG 7 cut(s) 12, 692, 1652, 1781, 2144, 2383, 2421
MunI CAATTG 1 cut(s) 1431
MvaI CCWGG 6 cut(s) 12, 692, 1652, 1781, 2144, 2421
MwoI GCNNNNNNNGC 6 cut(s) 122, 131, 222, 2993, 3353, 3446
NciI CCSGG 1 cut(s) 2383
NcoI CCATGG 2 cut(s) 349, 2914
NdeII GATC 5 cut(s) 544, 1149, 1570, 1964, 2424
NlaIV GGNNCC 5 cut(s) 17, 499, 1248, 2816, 3078
NmeAIII GCCGAG 1 cut(s) 983
NmuCI GTSAC 6 cut(s) 146, 244, 1525, 1999, 2343, 2514
NspI RCATGY 1 cut(s) 2806
NspV TTCGAA 2 cut(s) 463, 1102
OliI CACNNNNGTG 1 cut(s) 1668
PdmI GAANNNNTTC 3 cut(s) 755, 2539, 3103
PfeI GAWTC 9 cut(s) 256, 408, 426, 1549, 2185, 2728, 3006, 3032, 3359
PflMI CCANNNNNTGG 5 cut(s) 370, 948, 1091, 2267, 3086
PfoI TCCNGGA 1 cut(s) 2381
PinAI ACCGGT 1 cut(s) 2264
PkrI GCNGC 6 cut(s) 376, 678, 1495, 1634, 1642, 3439
PleI GAGTC 4 cut(s) 251, 1882, 2199, 2238
PpsI GAGTC 4 cut(s) 251, 1882, 2199, 2238
Ppu21I YACGTR 1 cut(s) 1703
PsiI TTATAA 1 cut(s) 2747
Psp124BI GAGCTC 2 cut(s) 986, 1059
Psp6I CCWGG 6 cut(s) 10, 690, 1650, 1779, 2142, 2419
PspFI CCCAGC 2 cut(s) 1225, 2954
PspGI CCWGG 6 cut(s) 10, 690, 1650, 1779, 2142, 2419
PspN4I GGNNCC 5 cut(s) 17, 499, 1248, 2816, 3078
PspPI GGNCC 5 cut(s) 929, 1648, 1673, 2108, 2270
PstI CTGCAG 1 cut(s) 3442
PstNI CAGNNNCTG 1 cut(s) 1535
PsuI RGATCY 2 cut(s) 1570, 1964
RsaI GTAC 7 cut(s) 231, 540, 1502, 2362, 2490, 2793, 2937
RsaNI GTAC 7 cut(s) 230, 539, 1501, 2361, 2489, 2792, 2936
RseI CAYNNNNRTG 2 cut(s) 1668, 2459
SacI GAGCTC 2 cut(s) 986, 1059
SalI GTCGAC 1 cut(s) 1784
SatI GCNGC 6 cut(s) 375, 677, 1494, 1633, 1641, 3438
Sau3AI GATC 5 cut(s) 544, 1149, 1570, 1964, 2424
Sau96I GGNCC 5 cut(s) 929, 1648, 1673, 2108, 2270
ScaI AGTACT 1 cut(s) 540
SchI GAGTC 4 cut(s) 252, 1883, 2199, 2238
ScrFI CCNGG 7 cut(s) 12, 692, 1652, 1781, 2144, 2383, 2421
SduI GDGCHC 4 cut(s) 450, 986, 1059, 3451
SexAI ACCWGGT 1 cut(s) 1779
SfaNI GCATC 6 cut(s) 291, 889, 954, 1303, 2302, 3226
SfcI CTRYAG 2 cut(s) 3393, 3438
SfuI TTCGAA 2 cut(s) 463, 1102
SinI GGWCC 4 cut(s) 929, 1648, 1673, 2270
SmiMI CAYNNNNRTG 2 cut(s) 1668, 2459
SmlI CTYRAG 7 cut(s) 128, 1052, 1627, 1666, 2216, 2819, 3404
SmoI CTYRAG 7 cut(s) 128, 1052, 1627, 1666, 2216, 2819, 3404
SnaBI TACGTA 1 cut(s) 1703
SpeI ACTAGT 2 cut(s) 143, 821
SsiI CCGC 5 cut(s) 225, 1095, 1290, 1493, 2447
SspI AATATT 2 cut(s) 199, 1018
SstI GAGCTC 2 cut(s) 986, 1059
StyD4I CCNGG 7 cut(s) 10, 690, 1650, 1779, 2142, 2381, 2419
StyI CCWWGG 8 cut(s) 349, 469, 1405, 1644, 2104, 2248, 2787, 2914
TaaI ACNGT 6 cut(s) 76, 1531, 2319, 3064, 3128, 3461
TaiI ACGT 2 cut(s) 1705, 2994
TaqI TCGA 8 cut(s) 26, 463, 1102, 1773, 1785, 2306, 2459, 2737
TatI WGTACW 5 cut(s) 229, 538, 1500, 2360, 2935
TauI GCSGC 1 cut(s) 1496
TfiI GAWTC 9 cut(s) 256, 408, 426, 1549, 2185, 2728, 3006, 3032, 3359
TscAI CASTG 6 cut(s) 537, 1003, 1618, 1695, 2322, 2622
TseFI GTSAC 6 cut(s) 146, 244, 1525, 1999, 2343, 2514
TseI GCWGC 5 cut(s) 374, 676, 1632, 1640, 3437
Tsp45I GTSAC 6 cut(s) 146, 244, 1525, 1999, 2343, 2514
TspGWI ACGGA 1 cut(s) 1506
TspRI CASTG 6 cut(s) 537, 1003, 1618, 1695, 2322, 2622
Van91I CCANNNNNTGG 5 cut(s) 370, 948, 1091, 2267, 3086
Vha464I CTTAAG 1 cut(s) 128
VpaK11BI GGWCC 4 cut(s) 929, 1648, 1673, 2270
XbaI TCTAGA 2 cut(s) 1333, 2197
XceI RCATGY 1 cut(s) 2806
XcmI CCANNNNNNNNNTGG 1 cut(s) 1908
XmiI GTMKAC 5 cut(s) 45, 1556, 1785, 2041, 2834
XmnI GAANNNNTTC 3 cut(s) 755, 2539, 3103
ZrmI AGTACT 1 cut(s) 540
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.