MD11G1180300.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Forward (+)
21921059 .. 21924993
3935 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1180300.v1.1.491

Sequence Viewer

Length: 3204 bp
ATGGGTCTTGCCGGAGTTATTCCTCCGCATCTAGGCAACCTCTCATTTCTCGTTGCGTTGGGCCTTACAAATAATAGTTTTCATGGTCCCCTACCCCAAGAACTATCTCGTTTGCGCCGGTTGAAGGCGATTCACTTTGAAAACAATAACTTTATGGGAACCATTCCTTCGTGGTTTGGGTCCTTCCCTATACTTCAAATCTTCACATTGTATGGTAATCGCTTCTCTGGTTTCATACCCGCTGCTATCTTCAACTTATCTGCACTTGAAATAATTGATCTGAGCAACAACCAACTATCGGAACTTCCGAACGAGATAGGCAGTTTAGGTCAGTTGGAGGAGTTGTTTGTGCAGGACAATGCCCTAAAAAGCTCTGCTCTTGTCCCCGTCCTCAACATATCTTCTTTGACTACTTTCACTCTGTTCGGAAACAACATGAGTGGCAGTCTTCCGGACAATATGTGTGAGCATCTTTCTAGTGTTCGACAATTTTCTTTGGCTCAAAACCAGCTTGACGGTCTGATTCCCTCCAAACTGTGGCAATGCAAAGAGCTTCGTCAATTCTCATTAGGGTCTAACAATTTCCGTGGAAGCATACCCAAAAGTCTTGGCAATTTGATCTACTTAATCCAGATTTTTCTTAATGGCAATAATTTAACAGGTACAATACCGGATGAGATTGGTGATCTTCCACAGTTAGAGAATTTGCAACTGACGATTAATAATCTCAATGGCATCATCCCATCCAAACTCTTCAATAACTCCATGATAAGACACATATGGCTTTCTTTAAATCAGCTTTCAGGTAGCCTCCCAGCAAACATAGGTCTTTACGCTCCAAACCTAGAATTCCTTGGTGTAGCCAAAAATAACCTCGCGGCCGGACTACTCCCTAACCTCTCCAATGCTTCCAAGCTCAGGGAACTAGACATGAATACAAACTCATTTACCGGGGTTCTTCCTAGCACGCTATGTTCCTTGAAAAACCTCAAGTATCGTTCCTTGTACTCGAATAATTTGACGACTGATGCTTCTACTCCACAAGCATCAAGCACTCTCTCTTGCTTGTTTAATCTTAGAGATTTGACAAAATTATACTTGTCACACAATCCACTAAACACCACAATTCCAGCTTCTCGCGGGAATCTTTCTATGTCACTCCAAAGAGTTGATTTAAGCATGTCCAACATCAGGGGTAACATTCCCGTTGATATTGGCAACTTGAGTAGCTTGATTGCATTAGACGTGGATAACAATCAGTTGAGTGGAGCAATTCCAACTTCAATACAAGGGCTACAAAATCTCCAAGCTTTGTATTTGAATGATAACGAACTGCGAGGACATATCCCGTACGAAATCTGTCAACTAAACAACCTAGCTGAGTTACGTTTGGGTGGTAATCGGCTCTCTGGTTCTATTCCTTCCTGCTTGGGTACTTTGGCAGTAGCTCTAAGAAGTCTATCGTTAAGGTCCAATTTGTTGACTTCTAAAATACCATCTTCCTTGTGGGAAGTCAAGTATATATTGCACCTAAACTTGTCATCCAACTCTCTAGTTGGACCACTCTCAGAAGATATCGGAAAGTTGAAAAATGTGGTGGATATGGATTTATCAAATAACCATTTCTCCGGAAACATTCCCGGTAACATTGGGGGTCTTCAGAATATGATTAATTTTTCCTTGGCAAAAAATTATTTAGAAGGCCCTATTCCCAGTTCATTTAAAACCTTGCTAAGCCTAGAATTCTTGGATTTGTCCAAAAACAATCTATCTGGAGTGATCCCTAAGTCATTGGAAGCACTCTTGTATCTCAAGCATCTGAATTTGTCTTTCAACAAACTCCAAGGAGAAATTCCAACAGGCGGGCCTTTCGGAAACTTCTCTGCGGATTCATTTGTATCAAACGGTGCACTTTGCGGTGCTTCCCGACTCCATGTTCCACTGTGCAAAAATAGAACAAAAGTTGAGCCAAATTGGAGGAAAGCTAAATATATCATCTCAGGGGTCATATCAGTGATACTCTTAGCAGCCACTGCATTGATTCTAATACTATGCAGGAAAAGGAATGTTGAAGTTGTAACAGAAACTGCCTCGCTGCGTCAAGTACTTTGGAGAAGAGTTTCACGCCTAGAACTTGTAAGGGCGACAAATGGATTTCATGAGAGTAACTTACTAGGCAAGGGGGGTTTTGGCTCAGTATACAGAGGAACACTTTCAGATGGGATAGATATTGCCTTCAAGGTTTTCAATTTACAGCTAGAAGGGGCATTCAAGAGTTTTGATAAGGAATGTGAAGTGCTAAGCAAAATTTGTCATCGGAATCTTATTAAAATCATAAGTTGCTGCGATGAACTTGATTTCAAAGCCTTGATACTTCAATTGATGCCTAATGAAAGCCTCGAAAAGTGGTTGCATTCTCCAAACCGCTTCATGAATATCCTACAGAGGTTGGACATAATGAAAGATGTTGCATTCGCACTAGAATATCTTCATCATGGTTACTCGATACCTGTTGTTCATTGTGATGTGAAACCAAGCAATATACTACTAGATGATGATATGGTTGCACATGTTGCTGATTTTGGCATCGCAAGACTTATCAGCGAAGGAGATTCGATGACGGAAACCATGACCCTAGCCACAATTGGATATATGGCTCCAGAGTATGGGATGGAAGGAATCGTTACGACAAGAGGGGATGTGTATAGTTTTGGTATTGTACTCATGGAGACATTTACAAAAAGGAAGCCAACAAATGAGATGTTTGTTGGGGAAATGAATTTAAAGCAATGGGTTGCACATTCATTATATCCAGATGCTGCTATGGATGAAGTTGTAGATGCCAATATACTTAGCAAGGAAGAAGATGGTGATTTCGTGAGCAGGAGGGATTGCTTATCATCTGTTATGAGATTAGCTTTAGCTTGCTCTGCAACATTGCCGGAAGAGAGGATTAACATGAAAGATGCCGCAGTCACACTCAATAAAATCAGGACCAAGTATTTGAAGGACTGGAGGACAGAATTTGTAGTTCTTGTTGTTCTCTATATTTTCAAATCCATTTTCATATTGTTGTTTTCGATCTGCAAAGACTACATTATTTTCTACAGCCAACCAAATTCATTTCAAAATTTTACACTTCGAGGTTACGAACGCGAGTCATGGGAACAAAAACTTATTTCAGTCAATATATCAGGAAGTTAA

Protein Analysis

1068

Amino Acids

118.08

Weight (kDa)

7.02

Isoelectric Point (pI)

35.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 65 - 122 4.4e-07 Leucine rich repeat
LRR_14 PF23598 352 - 488 2.2e-07 Leucine-rich repeat region
LRR_8 PF13855 411 - 469 2.5e-08 Leucine rich repeat
LRR_8 PF13855 559 - 614 1.5e-06 Leucine rich repeat
Pkinase PF00069 719 - 932 6.4e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 722 - 990 4.5e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 537, 2666
AccI GTMKAC 1 cut(s) 2199
AccII CGCG 3 cut(s) 878, 1140, 3156
AccIII TCCGGA 2 cut(s) 451, 1628
AciI CCGC 9 cut(s) 26, 240, 878, 1140, 1863, 1886, 1917, 2425, 2970
AclWI GGATC 1 cut(s) 1774
AcoI YGGCCR 1 cut(s) 879
AcuI CTGAAG 1 cut(s) 1643
AfaI GTAC 6 cut(s) 664, 1007, 1352, 1435, 2106, 2721
AfiI CCNNNNNNNGG 8 cut(s) 32, 124, 298, 537, 918, 1191, 1862, 2666
AflIII ACRYGT 1 cut(s) 2569
AjiI CACGTC 1 cut(s) 1246
AjuI GAANNNNNNNTTGG 2 cut(s) 1836, 1868
Alw21I GWGCWC 1 cut(s) 1912
Alw26I GTCTC 1 cut(s) 2723
Alw44I GTGCAC 1 cut(s) 1908
AlwI GGATC 1 cut(s) 1774
AlwNI CAGNNNCTG 3 cut(s) 2033, 2087, 2819
Aor13HI TCCGGA 2 cut(s) 451, 1628
AoxI GGCC 4 cut(s) 61, 879, 1702, 1865
ApaLI GTGCAC 1 cut(s) 1908
ApeKI GCWGC 5 cut(s) 242, 2027, 2095, 2343, 2819
ArsI GACNNNNNNTTYG 2 cut(s) 2986, 3018
AseI ATTAAT 2 cut(s) 720, 1671
Asp700I GAANNNNTTC 3 cut(s) 2119, 2212, 2487
AspLEI GCGC 1 cut(s) 117
AspS9I GGNCC 8 cut(s) 61, 86, 180, 1470, 1559, 1703, 1865, 2994
AsuC2I CCSGG 2 cut(s) 952, 1641
AsuHPI GGTGA 2 cut(s) 695, 2882
AvaII GGWCC 5 cut(s) 86, 180, 1470, 1559, 2994
BaeGI GKGCMC 1 cut(s) 1912
BaeI ACNNNNGTAYC 2 cut(s) 1790, 1823
BbsI GAAGAC 2 cut(s) 440, 1649
Bbv12I GWGCWC 1 cut(s) 1912
BbvI GCAGC 5 cut(s) 229, 2039, 2082, 2330, 2806
BccI CCATC 5 cut(s) 751, 1504, 2213, 2665, 2861
BcnI CCSGG 2 cut(s) 952, 1641
BcoDI GTCTC 1 cut(s) 2723
BfmI CTRYAG 2 cut(s) 2441, 3106
BisI GCNGC 7 cut(s) 243, 879, 2028, 2096, 2344, 2820, 2970
BlpI GCTNAGC 2 cut(s) 1733, 2300
BlsI GCNGC 7 cut(s) 244, 880, 2029, 2097, 2345, 2821, 2971
BmcAI AGTACT 1 cut(s) 2106
Bme1390I CCNGG 2 cut(s) 952, 1641
Bme18I GGWCC 5 cut(s) 86, 180, 1470, 1559, 2994
BmgBI CACGTC 1 cut(s) 1246
BmgT120I GGNCC 8 cut(s) 61, 86, 180, 1470, 1559, 1703, 1865, 2994
BmiI GGNNCC 4 cut(s) 88, 160, 181, 2658
BmrFI CCNGG 2 cut(s) 952, 1641
BmrI ACTGGG 1 cut(s) 1707
BmuI ACTGGG 1 cut(s) 1707
BpiI GAAGAC 2 cut(s) 440, 1649
BpmI CTGGAG 3 cut(s) 1794, 2643, 3034
Bpu10I CCTNAGC 1 cut(s) 917
Bpu1102I GCTNAGC 2 cut(s) 1733, 2300
BpuEI CTTGAG 3 cut(s) 974, 1243, 1796
BpuMI CCSGG 2 cut(s) 952, 1641
BsaBI GATNNNNATC 1 cut(s) 1254
BsaJI CCNNGG 5 cut(s) 586, 853, 951, 1680, 1843
BsaWI WCCGGW 3 cut(s) 451, 670, 1628
BsaXI ACNNNNNCTCC 6 cut(s) 329, 359, 1287, 1317, 1610, 1640
Bsc4I CCNNNNNNNGG 8 cut(s) 32, 124, 298, 537, 918, 1191, 1862, 2666
Bse118I RCCGGY 1 cut(s) 117
Bse1I ACTGG 2 cut(s) 1713, 3017
Bse3DI GCAATG 3 cut(s) 548, 2795, 2936
Bse8I GATNNNNATC 1 cut(s) 1254
BseAI TCCGGA 2 cut(s) 451, 1628
BseDI CCNNGG 5 cut(s) 586, 853, 951, 1680, 1843
BseGI GGATG 7 cut(s) 679, 738, 743, 1541, 2676, 2704, 2833
BseJI GATNNNNATC 1 cut(s) 1254
BseLI CCNNNNNNNGG 8 cut(s) 32, 124, 298, 537, 918, 1191, 1862, 2666
BseMI GCAATG 3 cut(s) 548, 2795, 2936
BseMII CTCAG 6 cut(s) 272, 931, 1371, 1581, 2013, 2208
BseNI ACTGG 2 cut(s) 1713, 3017
BseRI GAGGAG 1 cut(s) 353
BseSI GKGCMC 1 cut(s) 1912
BseX3I CGGCCG 1 cut(s) 879
BseXI GCAGC 5 cut(s) 229, 2039, 2082, 2330, 2806
BseYI CCCAGC 1 cut(s) 814
BsgI GTGCAG 2 cut(s) 246, 371
Bsh1236I CGCG 3 cut(s) 878, 1140, 3156
Bsh1285I CGRYCG 1 cut(s) 882
BshFI GGCC 4 cut(s) 63, 881, 1704, 1867
BsiEI CGRYCG 1 cut(s) 882
BsiHKAI GWGCWC 1 cut(s) 1912
BsiSI CCGG 9 cut(s) 12, 118, 452, 671, 882, 951, 1629, 1641, 2942
BsiWI CGTACG 1 cut(s) 1350
BslFI GGGAC 2 cut(s) 72, 368
BslI CCNNNNNNNGG 8 cut(s) 32, 124, 298, 537, 918, 1191, 1862, 2666
BsmAI GTCTC 1 cut(s) 2723
BsmFI GGGAC 2 cut(s) 72, 368
BsmI GAATGC 3 cut(s) 2267, 2413, 2471
BsnI GGCC 4 cut(s) 63, 881, 1704, 1867
Bsp1286I GDGCHC 1 cut(s) 1912
Bsp13I TCCGGA 2 cut(s) 451, 1628
Bsp143I GATC 5 cut(s) 277, 618, 685, 1779, 3081
Bsp1720I GCTNAGC 2 cut(s) 1733, 2300
BspACI CCGC 9 cut(s) 26, 240, 878, 1140, 1863, 1886, 1917, 2425, 2970
BspANI GGCC 4 cut(s) 63, 881, 1704, 1867
BspCNI CTCAG 6 cut(s) 273, 930, 1372, 1580, 2012, 2207
BspEI TCCGGA 2 cut(s) 451, 1628
BspFNI CGCG 3 cut(s) 878, 1140, 3156
BspHI TCATGA 2 cut(s) 2158, 2430
BspLI GGNNCC 4 cut(s) 88, 160, 181, 2658
BspPI GGATC 1 cut(s) 1774
BsrDI GCAATG 3 cut(s) 548, 2795, 2936
BsrFI RCCGGY 1 cut(s) 117
BsrI ACTGG 2 cut(s) 1713, 3017
BssAI RCCGGY 1 cut(s) 117
BssECI CCNNGG 5 cut(s) 586, 853, 951, 1680, 1843
BssMI GATC 5 cut(s) 277, 618, 685, 1779, 3081
BssNAI GTATAC 1 cut(s) 2200
BssT1I CCWWGG 3 cut(s) 853, 1680, 1843
Bst1107I GTATAC 1 cut(s) 2200
Bst4CI ACNGT 5 cut(s) 518, 537, 696, 1907, 1944
Bst6I CTCTTC 3 cut(s) 758, 2110, 2940
BstAPI GCANNNNNTGC 2 cut(s) 2033, 2573
BstC8I GCNNGC 3 cut(s) 968, 1865, 2926
BstDSI CCRYGG 1 cut(s) 586
BstF5I GGATG 7 cut(s) 679, 738, 743, 1541, 2676, 2704, 2833
BstFNI CGCG 3 cut(s) 878, 1140, 3156
BstHHI GCGC 1 cut(s) 117
BstKTI GATC 5 cut(s) 280, 621, 688, 1782, 3084
BstMAI GTCTC 1 cut(s) 2723
BstMBI GATC 5 cut(s) 277, 618, 685, 1779, 3081
BstMCI CGRYCG 1 cut(s) 882
BstMWI GCNNNNNNNGC 3 cut(s) 2033, 2573, 2930
BstNSI RCATGY 2 cut(s) 1183, 2573
BstSCI CCNGG 2 cut(s) 950, 1639
BstSFI CTRYAG 2 cut(s) 2441, 3106
BstSLI GKGCMC 1 cut(s) 1912
BstUI CGCG 3 cut(s) 878, 1140, 3156
BstV1I GCAGC 5 cut(s) 229, 2039, 2082, 2330, 2806
BstV2I GAAGAC 2 cut(s) 440, 1649
BstZ17I GTATAC 1 cut(s) 2200
BstZI CGGCCG 1 cut(s) 879
BsuRI GGCC 4 cut(s) 63, 881, 1704, 1867
BtgI CCRYGG 1 cut(s) 586
BtgZI GCGATG 2 cut(s) 2361, 2572
BtrI CACGTC 1 cut(s) 1246
BtsCI GGATG 7 cut(s) 679, 738, 743, 1541, 2676, 2704, 2833
BtsI GCAGTG 1 cut(s) 2031
BtsIMutI CAGTG 3 cut(s) 1940, 2019, 2031
Cac8I GCNNGC 3 cut(s) 968, 1865, 2926
CaiI CAGNNNCTG 3 cut(s) 2033, 2087, 2819
CciI TCATGA 2 cut(s) 2158, 2430
CfoI GCGC 1 cut(s) 117
Cfr10I RCCGGY 1 cut(s) 117
Cfr13I GGNCC 8 cut(s) 61, 86, 180, 1470, 1559, 1703, 1865, 2994
CseI GACGC 1 cut(s) 2087
Csp6I GTAC 6 cut(s) 663, 1006, 1351, 1434, 2105, 2720
CspCI CAANNNNNGTGG 4 cut(s) 421, 456, 568, 603
CviQI GTAC 6 cut(s) 663, 1006, 1351, 1434, 2105, 2720
DpnI GATC 5 cut(s) 279, 620, 687, 1781, 3083
DpnII GATC 5 cut(s) 277, 618, 685, 1779, 3081
DraI TTTAAA 3 cut(s) 792, 1723, 2784
EaeI YGGCCR 1 cut(s) 879
EagI CGGCCG 1 cut(s) 879
Eam1104I CTCTTC 3 cut(s) 758, 2110, 2940
EarI CTCTTC 3 cut(s) 758, 2110, 2940
EclXI CGGCCG 1 cut(s) 879
Eco130I CCWWGG 3 cut(s) 853, 1680, 1843
Eco32I GATATC 1 cut(s) 1576
Eco47I GGWCC 5 cut(s) 86, 180, 1470, 1559, 2994
Eco52I CGGCCG 1 cut(s) 879
Eco57I CTGAAG 1 cut(s) 1643
EcoO109I RGGNCCY 2 cut(s) 180, 1703
EcoRI GAATTC 2 cut(s) 848, 1742
EcoRV GATATC 1 cut(s) 1576
EcoT14I CCWWGG 3 cut(s) 853, 1680, 1843
ErhI CCWWGG 3 cut(s) 853, 1680, 1843
FaqI GGGAC 2 cut(s) 72, 368
FauI CCCGC 3 cut(s) 247, 1133, 1856
FauNDI CATATG 1 cut(s) 779
FblI GTMKAC 1 cut(s) 2199
Fnu4HI GCNGC 7 cut(s) 243, 879, 2028, 2096, 2344, 2820, 2970
FokI GGATG 7 cut(s) 686, 725, 730, 1528, 2683, 2711, 2840
Fsp4HI GCNGC 7 cut(s) 243, 879, 2028, 2096, 2344, 2820, 2970
GlaI GCGC 1 cut(s) 116
GluI GCNGC 7 cut(s) 243, 879, 2028, 2096, 2344, 2820, 2970
GsaI CCCAGC 1 cut(s) 818
GsuI CTGGAG 3 cut(s) 1794, 2643, 3034
HaeIII GGCC 4 cut(s) 63, 881, 1704, 1867
HapII CCGG 9 cut(s) 12, 118, 452, 671, 882, 951, 1629, 1641, 2942
HgaI GACGC 1 cut(s) 2087
HhaI GCGC 1 cut(s) 117
Hin6I GCGC 1 cut(s) 115
HinP1I GCGC 1 cut(s) 115
HincII GTYRAC 2 cut(s) 1364, 1482
HindII GTYRAC 2 cut(s) 1364, 1482
HindIII AAGCTT 1 cut(s) 1308
HpaII CCGG 9 cut(s) 12, 118, 452, 671, 882, 951, 1629, 1641, 2942
HphI GGTGA 2 cut(s) 695, 2882
Hpy166II GTNNAC 4 cut(s) 1364, 1482, 1910, 2200
Hpy8I GTNNAC 4 cut(s) 1364, 1482, 1910, 2200
HpyCH4III ACNGT 5 cut(s) 518, 537, 696, 1907, 1944
HpyCH4IV ACGT 2 cut(s) 1245, 1387
HpyF10VI GCNNNNNNNGC 3 cut(s) 2033, 2573, 2930
HpySE526I ACGT 2 cut(s) 1245, 1387
HspAI GCGC 1 cut(s) 115
Kpn2I TCCGGA 2 cut(s) 451, 1628
Kzo9I GATC 5 cut(s) 277, 618, 685, 1779, 3081
LmnI GCTCC 3 cut(s) 841, 1268, 2662
Lsp1109I GCAGC 5 cut(s) 229, 2039, 2082, 2330, 2806
MaeII ACGT 2 cut(s) 1245, 1387
MalI GATC 5 cut(s) 279, 620, 687, 1781, 3083
MboI GATC 5 cut(s) 277, 618, 685, 1779, 3081
MfeI CAATTG 2 cut(s) 2378, 2643
MhlI GDGCHC 1 cut(s) 1912
MlyI GAGTC 2 cut(s) 1923, 3167
MmeI TCCRAC 7 cut(s) 315, 1209, 1301, 1537, 1569, 1880, 2430
MroI TCCGGA 2 cut(s) 451, 1628
MroXI GAANNNNTTC 3 cut(s) 2119, 2212, 2487
MslI CAYNNNNRTG 2 cut(s) 2012, 2523
MspA1I CMGCKG 1 cut(s) 242
MspI CCGG 9 cut(s) 12, 118, 452, 671, 882, 951, 1629, 1641, 2942
MspR9I CCNGG 2 cut(s) 952, 1641
MunI CAATTG 2 cut(s) 2378, 2643
Mva1269I GAATGC 3 cut(s) 2267, 2413, 2471
MvnI CGCG 3 cut(s) 878, 1140, 3156
MwoI GCNNNNNNNGC 3 cut(s) 2033, 2573, 2930
NciI CCSGG 2 cut(s) 952, 1641
NdeI CATATG 1 cut(s) 779
NdeII GATC 5 cut(s) 277, 618, 685, 1779, 3081
NlaIV GGNNCC 4 cut(s) 88, 160, 181, 2658
NmuCI GTSAC 3 cut(s) 1101, 1155, 2974
NspI RCATGY 2 cut(s) 1183, 2573
PagI TCATGA 2 cut(s) 2158, 2430
PciI ACATGT 1 cut(s) 2569
PcsI WCGNNNNNNNCGW 1 cut(s) 305
PctI GAATGC 3 cut(s) 2267, 2413, 2471
PdmI GAANNNNTTC 3 cut(s) 2119, 2212, 2487
PfeI GAWTC 8 cut(s) 130, 523, 1144, 1889, 2041, 2320, 2612, 2679
Pfl23II CGTACG 1 cut(s) 1350
PflMI CCANNNNNTGG 2 cut(s) 537, 2666
PkrI GCNGC 7 cut(s) 244, 880, 2029, 2097, 2345, 2821, 2971
PleI GAGTC 2 cut(s) 1923, 3166
PpsI GAGTC 2 cut(s) 1923, 3166
PpuMI RGGWCCY 1 cut(s) 180
PscI ACATGT 1 cut(s) 2569
PshBI ATTAAT 2 cut(s) 720, 1671
Psp5II RGGWCCY 1 cut(s) 180
PspFI CCCAGC 1 cut(s) 814
PspLI CGTACG 1 cut(s) 1350
PspN4I GGNNCC 4 cut(s) 88, 160, 181, 2658
PspPI GGNCC 8 cut(s) 61, 86, 180, 1470, 1559, 1703, 1865, 2994
PspPPI RGGWCCY 1 cut(s) 180
PstNI CAGNNNCTG 3 cut(s) 2033, 2087, 2819
RsaI GTAC 6 cut(s) 664, 1007, 1352, 1435, 2106, 2721
RsaNI GTAC 6 cut(s) 663, 1006, 1351, 1434, 2105, 2720
RseI CAYNNNNRTG 2 cut(s) 2012, 2523
SatI GCNGC 7 cut(s) 243, 879, 2028, 2096, 2344, 2820, 2970
Sau3AI GATC 5 cut(s) 277, 618, 685, 1779, 3081
Sau96I GGNCC 8 cut(s) 61, 86, 180, 1470, 1559, 1703, 1865, 2994
ScaI AGTACT 1 cut(s) 2106
SchI GAGTC 2 cut(s) 1923, 3167
ScrFI CCNGG 2 cut(s) 952, 1641
SduI GDGCHC 1 cut(s) 1912
SfcI CTRYAG 2 cut(s) 2441, 3106
SinI GGWCC 5 cut(s) 86, 180, 1470, 1559, 2994
SmiMI CAYNNNNRTG 2 cut(s) 2012, 2523
SmlI CTYRAG 3 cut(s) 989, 1222, 1811
SmoI CTYRAG 3 cut(s) 989, 1222, 1811
SsiI CCGC 9 cut(s) 26, 240, 878, 1140, 1863, 1886, 1917, 2425, 2970
StyD4I CCNGG 2 cut(s) 950, 1639
StyI CCWWGG 3 cut(s) 853, 1680, 1843
TaaI ACNGT 5 cut(s) 518, 537, 696, 1907, 1944
TaiI ACGT 2 cut(s) 1248, 1390
TaqI TCGA 7 cut(s) 484, 1010, 2400, 2504, 2615, 3080, 3142
TatI WGTACW 3 cut(s) 1005, 2104, 2719
TauI GCSGC 2 cut(s) 881, 2972
TfiI GAWTC 8 cut(s) 130, 523, 1144, 1889, 2041, 2320, 2612, 2679
TscAI CASTG 3 cut(s) 1947, 2019, 2038
TseFI GTSAC 3 cut(s) 1101, 1155, 2974
TseI GCWGC 5 cut(s) 242, 2027, 2095, 2343, 2819
Tsp45I GTSAC 3 cut(s) 1101, 1155, 2974
TspGWI ACGGA 2 cut(s) 575, 2636
TspRI CASTG 3 cut(s) 1947, 2019, 2038
Van91I CCANNNNNTGG 2 cut(s) 537, 2666
VneI GTGCAC 1 cut(s) 1908
VpaK11BI GGWCC 5 cut(s) 86, 180, 1470, 1559, 2994
VspI ATTAAT 2 cut(s) 720, 1671
XceI RCATGY 2 cut(s) 1183, 2573
XcmI CCANNNNNNNNNTGG 1 cut(s) 1503
XmiI GTMKAC 1 cut(s) 2199
XmnI GAANNNNTTC 3 cut(s) 2119, 2212, 2487
ZrmI AGTACT 1 cut(s) 2106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.