MD03G1180000.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
24722495 .. 24726682
4188 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1180000.v1.1.491

Sequence Viewer

Length: 3372 bp
ATGTTGTCGATGATACACTACTGCTTGTGTTATATCTTTATGGTGATTATGGCTAATTACTTAACTGCAGGTGCATTAGCAATAGCTCATACCAATTTCAGCACAGATCAGTCTGCGCTTCTTGCTTTCAAAGCTCACATCACTAGTGACCCTCAAAACATCTTGACTGCCAACTGGTCCTTTGCCTCCAATTCCGACATTTGCAACTGGGTTGGCGTTACTTGCAGCGCTCGCCACCACAGAGTCACGGCTTTAAATCTCTCGTACATGGGTCTTGCCGGGGTTATTCCTCCGCATCTAGGCAACCTCTCATTTCTCGTTGAGTTGGGCCTTGAGAATAATAGTTTTCATGGTCCCCTACCCCAAGAATTGTCTCGTTTGCGCCGGTTGAAGGCGATTAACTCTCAAAACAACAACTTTATGGGAACCATTCCTTCGTGGTTTGGGTCCTTCCCTAAACTTCAAACCTTCAAATTGTTGGGTAATGGTTTCTCTGGTTTCATACCCGCTGCTATCTTCAACTTATCTGCACTCGAAATAATTGATCTGAGCAGTAACCAACTATCAGGTAGCATACCCAGAGAAATCGGCAACTTAACAATGGTGAAGGGCATATACCTTGACGACAACAAGTTCGAAGAACTTCCGAACGAGATAGGCAGTTTAGGTCAGCTAGAGGAGTTGTATGTGCAGTACAATGCCCTAAAAGGCTCTGCTTTTGTGCCTGTCCTCAACATATCTTCTTTGTCTATTTTGGCTCTATTTGGGAACAGCATGAGTGGCAGTCTTCCGGACAATATATGTGAGCATCTTTCGAGTGTTCAACGAATTAATTTGGGTCAAAACCAGTTTGACGGTCGTATTCCCTCCAAACTGTGGCAATGCAAAGAGCTTCGTAAATTCACACTTGAGTATAACAATTTCCGTGGAAGCATACCCAAAAGTCTTGGCAATTTGACCTACTTAAGCAAGATTTTTCTTAACGAAAATAATTTAGAAGGTACAATACCGGATGAGATTGGTGATCTTCCACAGTTAGAGATTTTGGCACTGGAGGGTAATAATCTCAATGGTGTCATCCCGTCCAAACTCTTCAATCTCTCCACGATAAGAAAAATAGGGCTTTCTTTTAATCACCTCTCAGGTAGCCTCCCAGCAAACATAGGTCTTAACGTTCCGAACCTAGAAATCCTTCAAGTAGCCCAAAATAACCTCGTGGCCGGACTTCTCCCTAGCCTCTCTAATGCTTCCAAGCTCTGGGATTTAGAAATGAGCGAAAAGTCATTTACCGGGTTTCTTCCTATCACACTCTGTTCCTTGAAAAACCTCGAGTACCTTGACTTGGACTCGAATAATTTGACGATTGATGCTTCTGCTGCACAAGCAGCAAGCACTCTCTCTTGCTTGTTTAATCTTAGAAATTTGACAGATTTAGGCTTGTCAGAAAATCCACTAAACACCACGATTCCAGCTTCTCGTGGGAATCTCTCTACGTCACTCTTATATGTTGGTTTAAGCTCTTCCAACATCAAGGGTAAGATTCCTGTTGATATTGGCAACTTGAGCAGCTTGATGTCGCTACACCTGGGAAACAATCAGTTGAGCGGAGCAATTCCAACTTCAATACAAAGGCTACAAAATCTCCAAGGTTTGTATTTGAATGATAACGAACTGCAAGGACATATCCCGTATGAACTCTGTCAACTAAACAACCTAGCTGAGTTATTTTTGGGTGGTAATCGGCTCTCTGGTTCTATTCCTTCCTGCTTGGGTACTTTGTCAGTAGCTCTAAGAAGTCTATCGTTAGGGTCCAATTTGTTAACTTCTAAAATACCATCTTCCTTGTGGGAACTCAACCATATATTGCAACTAGACTTGTCATCCAATTCTCTAGTTGGACCATTCTCAGAAGACATCGGAAAGTTGAAAGATGTGGTGGATATATATTTATCAAATAACCATTTCTCCGGAAACATTCCCGGTAGCATTGGTGGTCTTCAAAATATGATTAATATGTCCTTGGCAAACAATTATTTAGAAGGCCCTATTCCCAGTTCATTTAAAACCTTGCTAAGCCTAGAATTCTTGGATTTGTCCAAAAACAATCTATCCGGAGAGATCCCAAAGTCATTGGAAGCACTCTTGTATCTCAAGCATCTGAATTTGTCTTTCAACAAACTCCAAGGAGAAATTCCAACCGGCGGGCCTTTCGGAAACTTCTCTGCTGATTCATTTGTCTCAAATGGTGCACTCTGCGGTGCTTCCCGACTCCATGTTCCACTGTGCAAAAATAGAACAAAAGTTAAGCCAAATTGGAGGAAAGCTAAATATATCATCTCAGGGGTCATATCAGTAATACTCCTAGCGGCCGCTGCATTGATTATGATACTATGCAAGAAAAGGAATGTCGAAGTTGTTAGAGAAACTGCCTCGCTACATCAAGTTCTTTGGAGAAGAGTTTCGCGCCTAGAACTTGTAAGGGCAACAAATGGATTTCATGAGAGTAACTTACTAGGCACGGGGGGTTTTGGCTCAGTCTATAGAGGAACACTTTCAGACGGGATAGATACCGCCGTCAAGGTTTTCAATTTACAGCTAGAAGGGGCATTCAAGAGTTTTGATAAGGAATGTGAAATGCTAAGCAACATCCGTCACCGGAATCTTATTAAAATCATAAGTTGCTGCGATGAACTTGATTTCAAAGCCCTGATACTTCAATTGATGCCTAATGGAAGCCTCGAAAAGTGGTTGTATTCTCCAAACCGCTCCATGACTATCCTGCAGAGGTTAGACATAATGAAAGATGTTGCATTGGCACTAGAATATCTTCATCATGGTTACTCGATACCTATCGTTCATTGTGACGTGAAACCAAGCAATATACTACTAGATGATGATATGGTTGCACATGTTGCTGATTTTGGCATTGCAAGACTCATCAGCGGTGGAGATTCGATGACAGAAACAATGACCCTAGCCACAGTTGGATATATGGCTCCAGAGTATGGGATGGAAGGAAGCGTTTCGACAAGAGGGGATGTGTATAGTTTTGGTATTGTACTCATGGAGACATTCACAAAAAGGAAGCCAACAGACGAGATGTTTGTTGGGGAAATGGACTTAAAGCAATGGATTGCAGATTCATTATTTCCAGATGCTGCAATAGGTGAAGTTGTGGATGCCGATATACTGGGGGCGGAGGAAGATGGTGATTTCGTGAGCAGGAGGGATTGCTTATCCTCCGTTATGAGATTAGCTTTAGCTTGCTCTGCAGCATTGCCGGGAGAGAGGATTAACATGAAAGATGTCGCAATCACACTCACCAAAATCAAGACTAAGTATTTGAAGGACTGTGGAGGAGTGAACTCTTAG

Protein Analysis

1124

Amino Acids

122.58

Weight (kDa)

5.92

Isoelectric Point (pI)

33.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 35 - 76 7.8e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 168 - 353 2.1e-11 Leucine-rich repeat region
LRR_14 PF23598 499 - 580 1.3e-06 Leucine-rich repeat region
LRR_8 PF13855 523 - 582 4.9e-09 Leucine rich repeat
Pkinase PF00069 832 - 1032 2.4e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 835 - 1103 5.9e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 59
Acc36I ACCTGC 1 cut(s) 59
AccB7I CCANNNNNTGG 3 cut(s) 876, 1257, 3005
AccBSI CCGCTC 2 cut(s) 1605, 2766
AccII CGCG 1 cut(s) 2464
AccIII TCCGGA 3 cut(s) 790, 1967, 2111
AclI AACGTT 1 cut(s) 1173
AclWI GGATC 1 cut(s) 2113
AcoI YGGCCR 2 cut(s) 1218, 2367
AcsI RAATTY 5 cut(s) 899, 1420, 2081, 2161, 2190
AfaI GTAC 6 cut(s) 266, 695, 1003, 1334, 1774, 3060
AfeI AGCGCT 1 cut(s) 229
AfiI CCNNNNNNNGG 7 cut(s) 299, 391, 876, 1257, 1342, 2201, 3005
AflII CTTAAG 1 cut(s) 964
AflIII ACRYGT 1 cut(s) 2908
AhlI ACTAGT 1 cut(s) 143
AjiI CACGTC 1 cut(s) 2866
AjnI CCWGG 1 cut(s) 1584
AjuI GAANNNNNNNTTGG 2 cut(s) 2175, 2207
Alw21I GWGCWC 1 cut(s) 2251
Alw26I GTCTC 3 cut(s) 378, 2242, 3062
Alw44I GTGCAC 1 cut(s) 2247
AlwI GGATC 1 cut(s) 2113
AlwNI CAGNNNCTG 1 cut(s) 3158
Ama87I CYCGRG 1 cut(s) 1328
Aor13HI TCCGGA 3 cut(s) 790, 1967, 2111
Aor51HI AGCGCT 1 cut(s) 229
AoxI GGCC 5 cut(s) 328, 1218, 2041, 2204, 2367
ApaLI GTGCAC 1 cut(s) 2247
ApeKI GCWGC 9 cut(s) 225, 509, 1376, 1385, 1566, 2372, 2682, 3158, 3272
ApoI RAATTY 5 cut(s) 899, 1420, 2081, 2161, 2190
ArsI GACNNNNNNTTYG 6 cut(s) 617, 649, 3086, 3118, 3325, 3357
AseI ATTAAT 2 cut(s) 831, 2010
Asp700I GAANNNNTTC 6 cut(s) 642, 1191, 2458, 2551, 2826, 3022
AspLEI GCGC 4 cut(s) 118, 230, 384, 2466
AspS9I GGNCC 8 cut(s) 177, 328, 353, 447, 1809, 1898, 2042, 2204
AsuC2I CCSGG 4 cut(s) 280, 1291, 1980, 3282
AsuHPI GGTGA 8 cut(s) 55, 616, 1034, 1127, 2645, 3179, 3221, 3313
AsuII TTCGAA 1 cut(s) 636
AvaI CYCGRG 1 cut(s) 1328
AvaII GGWCC 5 cut(s) 177, 353, 447, 1809, 1898
BaeGI GKGCMC 1 cut(s) 2251
BaeI ACNNNNGTAYC 4 cut(s) 2129, 2162, 2559, 2592
BarI GAAGNNNNNNTAC 4 cut(s) 599, 631, 990, 1022
BauI CACGAG 2 cut(s) 1214, 1476
BbsI GAAGAC 3 cut(s) 779, 1917, 1988
Bbv12I GWGCWC 1 cut(s) 2251
BbvI GCAGC 9 cut(s) 237, 496, 1363, 1397, 1578, 2359, 2669, 3145, 3284
BccI CCATC 3 cut(s) 1843, 3004, 3200
BceAI ACGGC 2 cut(s) 264, 2558
BciT130I CCWGG 1 cut(s) 1586
BcnI CCSGG 4 cut(s) 280, 1291, 1980, 3282
BcoDI GTCTC 3 cut(s) 378, 2242, 3062
BcuI ACTAGT 1 cut(s) 143
BfmI CTRYAG 4 cut(s) 66, 2539, 2780, 3270
BfoI RGCGCY 1 cut(s) 231
BfrI CTTAAG 1 cut(s) 964
BfuAI ACCTGC 1 cut(s) 59
BlpI GCTNAGC 2 cut(s) 2072, 2639
Bme1390I CCNGG 5 cut(s) 280, 1291, 1586, 1980, 3282
Bme18I GGWCC 5 cut(s) 177, 353, 447, 1809, 1898
BmeT110I CYCGRG 1 cut(s) 1328
BmgBI CACGTC 1 cut(s) 2866
BmgT120I GGNCC 8 cut(s) 177, 328, 353, 447, 1809, 1898, 2042, 2204
BmiI GGNNCC 5 cut(s) 355, 427, 448, 1810, 2997
BmrFI CCNGG 5 cut(s) 280, 1291, 1586, 1980, 3282
BmrI ACTGGG 3 cut(s) 217, 2046, 3200
BmsI GCATC 7 cut(s) 304, 817, 1357, 2164, 2712, 3145, 3169
BmuI ACTGGG 3 cut(s) 217, 2046, 3200
BpiI GAAGAC 3 cut(s) 779, 1917, 1988
BpmI CTGGAG 2 cut(s) 1073, 2982
Bpu1102I GCTNAGC 2 cut(s) 2072, 2639
Bpu14I TTCGAA 1 cut(s) 636
BpuEI CTTGAG 4 cut(s) 353, 929, 1582, 2135
BpuMI CCSGG 4 cut(s) 280, 1291, 1980, 3282
BsaBI GATNNNNATC 1 cut(s) 2849
BsaJI CCNNGG 6 cut(s) 279, 925, 1585, 1645, 2019, 2182
BsaWI WCCGGW 5 cut(s) 790, 1009, 1967, 2111, 2655
BsaXI ACNNNNNCTCC 4 cut(s) 1626, 1656, 1949, 1979
Bsc4I CCNNNNNNNGG 7 cut(s) 299, 391, 876, 1257, 1342, 2201, 3005
Bse118I RCCGGY 2 cut(s) 384, 2198
Bse1I ACTGG 6 cut(s) 179, 212, 847, 1056, 2052, 3195
Bse3DI GCAATG 4 cut(s) 887, 2925, 3134, 3275
Bse8I GATNNNNATC 1 cut(s) 2849
BseAI TCCGGA 3 cut(s) 790, 1967, 2111
BseBI CCWGG 1 cut(s) 1586
BseDI CCNNGG 6 cut(s) 279, 925, 1585, 1645, 2019, 2182
BseGI GGATG 7 cut(s) 1018, 1077, 1880, 2646, 3015, 3043, 3184
BseJI GATNNNNATC 1 cut(s) 2849
BseLI CCNNNNNNNGG 7 cut(s) 299, 391, 876, 1257, 1342, 2201, 3005
BseMI GCAATG 4 cut(s) 887, 2925, 3134, 3275
BseMII CTCAG 6 cut(s) 539, 1155, 1710, 1920, 2352, 2547
BseNI ACTGG 6 cut(s) 179, 212, 847, 1056, 2052, 3195
BseRI GAGGAG 2 cut(s) 692, 3372
BseSI GKGCMC 1 cut(s) 2251
BseX3I CGGCCG 1 cut(s) 2367
BseXI GCAGC 9 cut(s) 237, 496, 1363, 1397, 1578, 2359, 2669, 3145, 3284
BseYI CCCAGC 1 cut(s) 1153
BsgI GTGCAG 3 cut(s) 513, 710, 1362
Bsh1236I CGCG 1 cut(s) 2464
Bsh1285I CGRYCG 2 cut(s) 859, 2370
BshFI GGCC 5 cut(s) 330, 1220, 2043, 2206, 2369
BsiEI CGRYCG 2 cut(s) 859, 2370
BsiHKAI GWGCWC 1 cut(s) 2251
BsiHKCI CYCGRG 1 cut(s) 1328
BslFI GGGAC 1 cut(s) 339
BslI CCNNNNNNNGG 7 cut(s) 299, 391, 876, 1257, 1342, 2201, 3005
BsmAI GTCTC 3 cut(s) 378, 2242, 3062
BsmFI GGGAC 1 cut(s) 339
BsmI GAATGC 1 cut(s) 2606
BsnI GGCC 5 cut(s) 330, 1220, 2043, 2206, 2369
BsoBI CYCGRG 1 cut(s) 1328
Bsp119I TTCGAA 1 cut(s) 636
Bsp1286I GDGCHC 1 cut(s) 2251
Bsp13I TCCGGA 3 cut(s) 790, 1967, 2111
Bsp143I GATC 4 cut(s) 106, 544, 1024, 2118
Bsp1720I GCTNAGC 2 cut(s) 2072, 2639
BspANI GGCC 5 cut(s) 330, 1220, 2043, 2206, 2369
BspCNI CTCAG 6 cut(s) 540, 1154, 1711, 1919, 2351, 2546
BspEI TCCGGA 3 cut(s) 790, 1967, 2111
BspFNI CGCG 1 cut(s) 2464
BspHI TCATGA 1 cut(s) 2497
BspLI GGNNCC 5 cut(s) 355, 427, 448, 1810, 2997
BspMAI CTGCAG 3 cut(s) 70, 2784, 3274
BspMI ACCTGC 1 cut(s) 59
BspPI GGATC 1 cut(s) 2113
BspQI GCTCTTC 1 cut(s) 1525
BspT104I TTCGAA 1 cut(s) 636
BspTI CTTAAG 1 cut(s) 964
BsrBI CCGCTC 2 cut(s) 1605, 2766
BsrDI GCAATG 4 cut(s) 887, 2925, 3134, 3275
BsrFI RCCGGY 2 cut(s) 384, 2198
BsrI ACTGG 6 cut(s) 179, 212, 847, 1056, 2052, 3195
BssAI RCCGGY 2 cut(s) 384, 2198
BssECI CCNNGG 6 cut(s) 279, 925, 1585, 1645, 2019, 2182
BssMI GATC 4 cut(s) 106, 544, 1024, 2118
BssSI CACGAG 2 cut(s) 1214, 1476
BssT1I CCWWGG 3 cut(s) 1645, 2019, 2182
Bst2BI CACGAG 2 cut(s) 1214, 1476
Bst2UI CCWGG 1 cut(s) 1586
Bst4CI ACNGT 6 cut(s) 857, 876, 1035, 2283, 2983, 3353
Bst6I CTCTTC 3 cut(s) 1097, 1525, 2449
BstAFI CTTAAG 1 cut(s) 964
BstAPI GCANNNNNTGC 1 cut(s) 2912
BstBI TTCGAA 1 cut(s) 636
BstC8I GCNNGC 4 cut(s) 232, 1390, 2204, 3265
BstDSI CCRYGG 1 cut(s) 925
BstF5I GGATG 7 cut(s) 1018, 1077, 1880, 2646, 3015, 3043, 3184
BstFNI CGCG 1 cut(s) 2464
BstH2I RGCGCY 1 cut(s) 231
BstHHI GCGC 4 cut(s) 118, 230, 384, 2466
BstKTI GATC 4 cut(s) 109, 547, 1027, 2121
BstMAI GTCTC 3 cut(s) 378, 2242, 3062
BstMBI GATC 4 cut(s) 106, 544, 1024, 2118
BstMCI CGRYCG 2 cut(s) 859, 2370
BstNI CCWGG 1 cut(s) 1586
BstNSI RCATGY 1 cut(s) 2912
BstSCI CCNGG 5 cut(s) 278, 1289, 1584, 1978, 3280
BstSFI CTRYAG 4 cut(s) 66, 2539, 2780, 3270
BstSLI GKGCMC 1 cut(s) 2251
BstUI CGCG 1 cut(s) 2464
BstV1I GCAGC 9 cut(s) 237, 496, 1363, 1397, 1578, 2359, 2669, 3145, 3284
BstV2I GAAGAC 3 cut(s) 779, 1917, 1988
BstX2I RGATCY 1 cut(s) 2118
BstYI RGATCY 1 cut(s) 2118
BstZI CGGCCG 1 cut(s) 2367
BsuRI GGCC 5 cut(s) 330, 1220, 2043, 2206, 2369
BtgI CCRYGG 1 cut(s) 925
BtgZI GCGATG 1 cut(s) 2700
BtrI CACGTC 1 cut(s) 2866
BtsCI GGATG 7 cut(s) 1018, 1077, 1880, 2646, 3015, 3043, 3184
BtsIMutI CAGTG 2 cut(s) 1049, 2279
BveI ACCTGC 1 cut(s) 59
Cac8I GCNNGC 4 cut(s) 232, 1390, 2204, 3265
CaiI CAGNNNCTG 1 cut(s) 3158
CciI TCATGA 1 cut(s) 2497
CciNI GCGGCCGC 1 cut(s) 2367
CfoI GCGC 4 cut(s) 118, 230, 384, 2466
Cfr10I RCCGGY 2 cut(s) 384, 2198
Cfr13I GGNCC 8 cut(s) 177, 328, 353, 447, 1809, 1898, 2042, 2204
Csp6I GTAC 6 cut(s) 265, 694, 1002, 1333, 1773, 3059
CspCI CAANNNNNGTGG 2 cut(s) 907, 942
CviQI GTAC 6 cut(s) 265, 694, 1002, 1333, 1773, 3059
DpnI GATC 4 cut(s) 108, 546, 1026, 2120
DpnII GATC 4 cut(s) 106, 544, 1024, 2118
DraI TTTAAA 2 cut(s) 255, 2062
EaeI YGGCCR 2 cut(s) 1218, 2367
EagI CGGCCG 1 cut(s) 2367
Eam1104I CTCTTC 3 cut(s) 1097, 1525, 2449
EarI CTCTTC 3 cut(s) 1097, 1525, 2449
EciI GGCGGA 1 cut(s) 3212
EclXI CGGCCG 1 cut(s) 2367
Eco130I CCWWGG 3 cut(s) 1645, 2019, 2182
Eco47I GGWCC 5 cut(s) 177, 353, 447, 1809, 1898
Eco47III AGCGCT 1 cut(s) 229
Eco52I CGGCCG 1 cut(s) 2367
Eco88I CYCGRG 1 cut(s) 1328
EcoO109I RGGNCCY 2 cut(s) 447, 2042
EcoRI GAATTC 1 cut(s) 2081
EcoRII CCWGG 1 cut(s) 1584
EcoT14I CCWWGG 3 cut(s) 1645, 2019, 2182
ErhI CCWWGG 3 cut(s) 1645, 2019, 2182
FaqI GGGAC 1 cut(s) 339
FauI CCCGC 2 cut(s) 514, 2195
FokI GGATG 7 cut(s) 1025, 1064, 1867, 2633, 3022, 3050, 3191
GlaI GCGC 4 cut(s) 117, 229, 383, 2465
GsaI CCCAGC 1 cut(s) 1157
GsuI CTGGAG 2 cut(s) 1073, 2982
HaeII RGCGCY 1 cut(s) 231
HaeIII GGCC 5 cut(s) 330, 1220, 2043, 2206, 2369
HhaI GCGC 4 cut(s) 118, 230, 384, 2466
Hin6I GCGC 4 cut(s) 116, 228, 382, 2464
HinP1I GCGC 4 cut(s) 116, 228, 382, 2464
HincII GTYRAC 2 cut(s) 1703, 1821
HindII GTYRAC 2 cut(s) 1703, 1821
HpaI GTTAAC 1 cut(s) 1821
HphI GGTGA 8 cut(s) 55, 616, 1034, 1127, 2645, 3179, 3221, 3313
Hpy166II GTNNAC 4 cut(s) 1703, 1821, 2249, 3364
Hpy8I GTNNAC 4 cut(s) 1703, 1821, 2249, 3364
HpyCH4III ACNGT 6 cut(s) 857, 876, 1035, 2283, 2983, 3353
HpyCH4IV ACGT 3 cut(s) 1173, 1493, 2865
HpySE526I ACGT 3 cut(s) 1173, 1493, 2865
HspAI GCGC 4 cut(s) 116, 228, 382, 2464
Kpn2I TCCGGA 3 cut(s) 790, 1967, 2111
KspAI GTTAAC 1 cut(s) 1821
Kzo9I GATC 4 cut(s) 106, 544, 1024, 2118
LguI GCTCTTC 1 cut(s) 1525
LmnI GCTCC 3 cut(s) 1607, 2771, 3001
Lsp1109I GCAGC 9 cut(s) 237, 496, 1363, 1397, 1578, 2359, 2669, 3145, 3284
LweI GCATC 7 cut(s) 304, 817, 1357, 2164, 2712, 3145, 3169
MaeII ACGT 3 cut(s) 1173, 1493, 2865
MaeIII GTNAC 9 cut(s) 146, 217, 244, 554, 1494, 2504, 2651, 2837, 2861
MalI GATC 4 cut(s) 108, 546, 1026, 2120
MbiI CCGCTC 2 cut(s) 1605, 2766
MboI GATC 4 cut(s) 106, 544, 1024, 2118
MfeI CAATTG 1 cut(s) 2717
MflI RGATCY 1 cut(s) 2118
MhlI GDGCHC 1 cut(s) 2251
MlyI GAGTC 4 cut(s) 252, 1340, 2262, 2928
MmeI TCCRAC 6 cut(s) 219, 1548, 1640, 1876, 2219, 2965
MroI TCCGGA 3 cut(s) 790, 1967, 2111
MroXI GAANNNNTTC 6 cut(s) 642, 1191, 2458, 2551, 2826, 3022
MspA1I CMGCKG 3 cut(s) 509, 2372, 2943
MspCI CTTAAG 1 cut(s) 964
MspR9I CCNGG 5 cut(s) 280, 1291, 1586, 1980, 3282
MunI CAATTG 1 cut(s) 2717
Mva1269I GAATGC 1 cut(s) 2606
MvaI CCWGG 1 cut(s) 1586
MvnI CGCG 1 cut(s) 2464
NciI CCSGG 4 cut(s) 280, 1291, 1980, 3282
NdeII GATC 4 cut(s) 106, 544, 1024, 2118
NlaIV GGNNCC 5 cut(s) 355, 427, 448, 1810, 2997
NmuCI GTSAC 5 cut(s) 146, 244, 1494, 2651, 2861
NotI GCGGCCGC 1 cut(s) 2367
NspI RCATGY 1 cut(s) 2912
NspV TTCGAA 1 cut(s) 636
PaeR7I CTCGAG 1 cut(s) 1328
PagI TCATGA 1 cut(s) 2497
PaqCI CACCTGC 1 cut(s) 59
PciI ACATGT 1 cut(s) 2908
PciSI GCTCTTC 1 cut(s) 1525
PctI GAATGC 1 cut(s) 2606
PdmI GAANNNNTTC 6 cut(s) 642, 1191, 2458, 2551, 2826, 3022
PfeI GAWTC 7 cut(s) 1465, 1483, 1540, 2228, 2659, 2951, 3140
PflMI CCANNNNNTGG 3 cut(s) 876, 1257, 3005
PleI GAGTC 4 cut(s) 251, 1340, 2262, 2928
PpsI GAGTC 4 cut(s) 251, 1340, 2262, 2928
PpuMI RGGWCCY 1 cut(s) 447
PscI ACATGT 1 cut(s) 2908
PshBI ATTAAT 2 cut(s) 831, 2010
Psp1406I AACGTT 1 cut(s) 1173
Psp5II RGGWCCY 1 cut(s) 447
Psp6I CCWGG 1 cut(s) 1584
PspFI CCCAGC 1 cut(s) 1153
PspGI CCWGG 1 cut(s) 1584
PspN4I GGNNCC 5 cut(s) 355, 427, 448, 1810, 2997
PspPI GGNCC 8 cut(s) 177, 328, 353, 447, 1809, 1898, 2042, 2204
PspPPI RGGWCCY 1 cut(s) 447
PspXI VCTCGAGB 1 cut(s) 1328
PstI CTGCAG 3 cut(s) 70, 2784, 3274
PstNI CAGNNNCTG 1 cut(s) 3158
PsuI RGATCY 1 cut(s) 2118
RsaI GTAC 6 cut(s) 266, 695, 1003, 1334, 1774, 3060
RsaNI GTAC 6 cut(s) 265, 694, 1002, 1333, 1773, 3059
SapI GCTCTTC 1 cut(s) 1525
Sau3AI GATC 4 cut(s) 106, 544, 1024, 2118
Sau96I GGNCC 8 cut(s) 177, 328, 353, 447, 1809, 1898, 2042, 2204
SchI GAGTC 4 cut(s) 252, 1340, 2262, 2928
ScrFI CCNGG 5 cut(s) 280, 1291, 1586, 1980, 3282
SduI GDGCHC 1 cut(s) 2251
SfaNI GCATC 7 cut(s) 304, 817, 1357, 2164, 2712, 3145, 3169
SfcI CTRYAG 4 cut(s) 66, 2539, 2780, 3270
Sfr274I CTCGAG 1 cut(s) 1328
SfuI TTCGAA 1 cut(s) 636
SinI GGWCC 5 cut(s) 177, 353, 447, 1809, 1898
SlaI CTCGAG 1 cut(s) 1328
SmlI CTYRAG 6 cut(s) 332, 908, 964, 1328, 1561, 2150
SmoI CTYRAG 6 cut(s) 332, 908, 964, 1328, 1561, 2150
SpeI ACTAGT 1 cut(s) 143
StyD4I CCNGG 5 cut(s) 278, 1289, 1584, 1978, 3280
StyI CCWWGG 3 cut(s) 1645, 2019, 2182
TaaI ACNGT 6 cut(s) 857, 876, 1035, 2283, 2983, 3353
TaiI ACGT 3 cut(s) 1176, 1496, 2868
TatI WGTACW 2 cut(s) 693, 3058
TauI GCSGC 2 cut(s) 2369, 2372
TfiI GAWTC 7 cut(s) 1465, 1483, 1540, 2228, 2659, 2951, 3140
TscAI CASTG 2 cut(s) 1056, 2286
TseFI GTSAC 5 cut(s) 146, 244, 1494, 2651, 2861
TseI GCWGC 9 cut(s) 225, 509, 1376, 1385, 1566, 2372, 2682, 3158, 3272
Tsp45I GTSAC 5 cut(s) 146, 244, 1494, 2651, 2861
TspGWI ACGGA 3 cut(s) 914, 2639, 3232
TspRI CASTG 2 cut(s) 1056, 2286
Van91I CCANNNNNTGG 3 cut(s) 876, 1257, 3005
Vha464I CTTAAG 1 cut(s) 964
VneI GTGCAC 1 cut(s) 2247
VpaK11BI GGWCC 5 cut(s) 177, 353, 447, 1809, 1898
VspI ATTAAT 2 cut(s) 831, 2010
XapI RAATTY 5 cut(s) 899, 1420, 2081, 2161, 2190
XceI RCATGY 1 cut(s) 2912
XcmI CCANNNNNNNNNTGG 1 cut(s) 1842
XhoI CTCGAG 1 cut(s) 1328
XmnI GAANNNNTTC 6 cut(s) 642, 1191, 2458, 2551, 2826, 3022
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.