FvH4_3g37722

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
32339876 .. 32342743
2868 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g37722.t1

Sequence Viewer

Length: 1923 bp
ATGTCGTTTGTGCAAGAAAATGCGCTAGAAGGAAATGTTCCTACCGTTGTCTTCAACATGTCTTCTTTGATTACTTTGACTCTATTTGGAAACTATTTAAAGGGCAGACTTCCGGACAATATGTGCCAGAATCTTCCTCGTATTCAAGAGTTGTATTTTAGTCATAACCAGCTTGAAGGTCCACTTCCATCCATATATTGGCATTGCAAACAACTTGTCAATTTAAGATTGGGGCGTAACAACTTCATTGGAAGCATACCCAAAAATATTGGAAATGCAACTGAGTTATCGCAGGATGTTTATCTATACGACTGCAACTTGAGAGGTAATGTACTTGATGATGTAGGCAACTTGAGCAGCTTGGCAGTTTTATCCATGTATAACAACAAATTAAGTGGATCAATCCCAGCCTCACTAGGAAATTTGAAAAATCTCCAGGGTTTGAGTTTGGGCAGTAACGAATTGCAAGGACACATCCCGGATGAACTTTGTCAACTAAAATACCTTGCTATCTTAGGGTTGCATGGTAACCAGCTCTCTGGCTCTATACCTTCTTGTTTGGGTCACCTGGTCACTGCACTAAGATATCTCTTCTTACATTCCAATTTGTTGAGTTCCACAATACCATCTAGTTTGTGGGGACTCACATATATCTTGGATCTATACTTGTCATCCAATAACCTAAGTGGATCTCTCTCGGAAGATGTTGGTAATTTAAAAGTTGTCATAGTTATCGATTTATCAAACAACCACTTTTCTGGTAGTATACCGAGCAACATTGGGAATCTACAAACGTTGCAGAATCTCTCCTTGGAGAATAACAACTTCAAAGGCCTTATTCCTAGTTCACTTGGAAAATCCCTCAGCGTGGTACTTTTGGACTTGTCCAAAAACAATCTGTCTGGAATGATTCCAAAGTCACTTGAATCACTCAAATATCTCAAGATTTTGGATCTATCTTTCAACAAACTCCAAGGAGAAATCCCAACAGGTGGACCTCTTCGAAACTTCTCTGCTCAATCATTTGTGTCGAGTGGGAAGCTCTGTGGTGCTTCCCGGTTCCATGTCCCAGCATGCAAGAACAGTATATTTGAAGCACATTCAACTAACTCAAGCAGATCCATCTCCAAGTACATTATCCTAGGGATATTGTCAGCAATGTTCATTGTGTCCTCCGTTTGGATAGTGATACTACGTAGAAGAAACAATGTGGAAGCTGCAGAAGAGAATGAACTGTTATCTCAACTTCTATGGAGAGGGACATTTTCTGGTGGGATAAATGTGGCCATAAAGGTTTTCAATTTACAGCTAGAAGAGGCCTTCAAGAGTTTCGATATTGAGTGTGAAATTCTAAGCAACATTCGTCATCGAAATCTTATTAAAATCATCACTTGTTGCAGTCAAATTGATTTCAAAGCCGTGGTACTGAACTACATGCCTAAGGGGAGCCTTGAGAAGTGGTTATATTCTCCAAACTTGTGTTTAAACATCCTGCAGAGATTGAGTATTATGATAAATGTTGCATCGGCATTGGAATACCTTCATCATGGTTATGAACCATCTATTGTTCACTGTGATTTGAAACCCAGCAATATCCTACTAGATGATGAGGATATGAGTGCACATGTTGCTGACTTTGGCATTGCAAAACTCTTGTGTGGAAGAGATTCCATGACCCAAACCATCACTCAAGCCACAATTGGATATATGGCCCCAGAGTATGGAACGGAAGGAATAGTTACTAGAAGAGGAGATGTGTACAGTTTTGGTGTCGTGTTGATGGAAACATTCACAAGAAAGAAGCCAACGGATGAGATGTTCGTTGGGGAAATGAGTTTAAAGCAATGGGTTTCAAATTCAGCATTACTTGATGTTGTGGATGCCAACTTACAAGTGACAGAAGCAGATGATCATGATTTGTGA

Protein Analysis

641

Amino Acids

70.61

Weight (kDa)

6.03

Isoelectric Point (pI)

42.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 102 - 202 1.7e-06 Leucine-rich repeat region
LRR_14 PF23598 222 - 324 4.7e-06 Leucine-rich repeat region
LRR_8 PF13855 265 - 324 9.3e-07 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 424 - 606 4.6e-34 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 427 - 604 2.3e-32 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 3 cut(s) 198, 992, 1721
AccI GTMKAC 1 cut(s) 766
AccIII TCCGGA 1 cut(s) 112
AclI AACGTT 1 cut(s) 794
AclWI GGATC 5 cut(s) 406, 666, 697, 960, 1113
AcoI YGGCCR 1 cut(s) 1284
AcsI RAATTY 3 cut(s) 421, 1347, 1855
AfaI GTAC 5 cut(s) 333, 873, 1133, 1425, 1760
AfiI CCNNNNNNNGG 5 cut(s) 198, 868, 992, 1179, 1721
AflIII ACRYGT 2 cut(s) 57, 1624
AjnI CCWGG 2 cut(s) 435, 567
AjuI GAANNNNNNNTTGG 2 cut(s) 794, 826
AloI GAACNNNNNNTCC 2 cut(s) 1802, 1834
AluBI AGCT 6 cut(s) 172, 360, 535, 1042, 1217, 1309
AluI AGCT 6 cut(s) 172, 360, 535, 1042, 1217, 1309
Alw21I GWGCWC 1 cut(s) 1624
Alw44I GTGCAC 1 cut(s) 1620
AlwI GGATC 5 cut(s) 406, 666, 697, 960, 1113
Aor13HI TCCGGA 1 cut(s) 112
AoxI GGCC 4 cut(s) 832, 1284, 1317, 1710
ApaLI GTGCAC 1 cut(s) 1620
ApeKI GCWGC 2 cut(s) 357, 1217
ApoI RAATTY 3 cut(s) 421, 1347, 1855
ArsI GACNNNNNNTTYG 2 cut(s) 201, 233
Asp700I GAANNNNTTC 2 cut(s) 1539, 1666
AspA2I CCTAGG 1 cut(s) 1141
AspLEI GCGC 1 cut(s) 25
AspS9I GGNCC 3 cut(s) 179, 995, 1711
AsuC2I CCSGG 2 cut(s) 479, 1057
AsuHPI GGTGA 1 cut(s) 557
AsuII TTCGAA 1 cut(s) 1003
AvaII GGWCC 2 cut(s) 179, 995
AvrII CCTAGG 1 cut(s) 1141
AxyI CCTNAGG 1 cut(s) 1440
BaeGI GKGCMC 1 cut(s) 1624
BalI TGGCCA 1 cut(s) 1286
BbsI GAAGAC 2 cut(s) 43, 54
Bbv12I GWGCWC 1 cut(s) 1624
BbvCI CCTCAGC 1 cut(s) 863
BbvI GCAGC 2 cut(s) 369, 1204
BccI CCATC 6 cut(s) 196, 634, 1130, 1567, 1691, 1774
BceAI ACGGC 1 cut(s) 1403
BciT130I CCWGG 2 cut(s) 437, 569
BclI TGATCA 1 cut(s) 1909
BcnI CCSGG 2 cut(s) 479, 1057
BfaI CTAG 8 cut(s) 26, 416, 630, 843, 1142, 1310, 1601, 1743
BfmI CTRYAG 2 cut(s) 1218, 1493
BisI GCNGC 2 cut(s) 358, 1218
BlnI CCTAGG 1 cut(s) 1141
BlsI GCNGC 2 cut(s) 359, 1219
Bme1390I CCNGG 4 cut(s) 437, 479, 569, 1057
Bme18I GGWCC 2 cut(s) 179, 995
BmgT120I GGNCC 3 cut(s) 179, 995, 1711
BmiI GGNNCC 3 cut(s) 1061, 1448, 1713
BmrFI CCNGG 4 cut(s) 437, 479, 569, 1057
BmsI GCATC 2 cut(s) 1532, 1870
BpiI GAAGAC 2 cut(s) 43, 54
BpmI CTGGAG 1 cut(s) 419
Bpu10I CCTNAGC 1 cut(s) 863
Bpu14I TTCGAA 1 cut(s) 1003
BpuEI CTTGAG 6 cut(s) 340, 373, 926, 1096, 1472, 1674
BpuMI CCSGG 2 cut(s) 479, 1057
Bsa29I ATCGAT 1 cut(s) 735
BsaAI YACGTR 1 cut(s) 1196
BsaBI GATNNNNATC 1 cut(s) 300
BsaJI CCNNGG 5 cut(s) 436, 810, 973, 1141, 1419
BsaWI WCCGGW 1 cut(s) 112
Bsc4I CCNNNNNNNGG 5 cut(s) 198, 868, 992, 1179, 1721
Bse21I CCTNAGG 1 cut(s) 1440
Bse3DI GCAATG 4 cut(s) 202, 1164, 1641, 1850
Bse8I GATNNNNATC 1 cut(s) 300
BseAI TCCGGA 1 cut(s) 112
BseBI CCWGG 2 cut(s) 437, 569
BseCI ATCGAT 1 cut(s) 735
BseDI CCNNGG 5 cut(s) 436, 810, 973, 1141, 1419
BseGI GGATG 8 cut(s) 188, 301, 474, 487, 671, 1488, 1816, 1885
BseJI GATNNNNATC 1 cut(s) 300
BseLI CCNNNNNNNGG 5 cut(s) 198, 868, 992, 1179, 1721
BseMI GCAATG 4 cut(s) 202, 1164, 1641, 1850
BseMII CTCAG 2 cut(s) 273, 877
BseRI GAGGAG 1 cut(s) 1764
BseSI GKGCMC 1 cut(s) 1624
BseXI GCAGC 2 cut(s) 369, 1204
BseYI CCCAGC 3 cut(s) 406, 1069, 1586
BsgI GTGCAG 1 cut(s) 561
BshFI GGCC 4 cut(s) 834, 1286, 1319, 1712
BshVI ATCGAT 1 cut(s) 735
BsiHKAI GWGCWC 1 cut(s) 1624
BsiSI CCGG 3 cut(s) 113, 479, 1057
BslFI GGGAC 3 cut(s) 654, 1052, 1273
BslI CCNNNNNNNGG 5 cut(s) 198, 868, 992, 1179, 1721
BsmFI GGGAC 3 cut(s) 654, 1052, 1273
BsnI GGCC 4 cut(s) 834, 1286, 1319, 1712
Bsp119I TTCGAA 1 cut(s) 1003
Bsp1286I GDGCHC 1 cut(s) 1624
Bsp13I TCCGGA 1 cut(s) 112
Bsp1407I TGTACA 1 cut(s) 1758
Bsp143I GATC 6 cut(s) 398, 658, 689, 952, 1118, 1909
BspANI GGCC 4 cut(s) 834, 1286, 1319, 1712
BspCNI CTCAG 2 cut(s) 274, 876
BspDI ATCGAT 1 cut(s) 735
BspEI TCCGGA 1 cut(s) 112
BspHI TCATGA 1 cut(s) 1912
BspLI GGNNCC 3 cut(s) 1061, 1448, 1713
BspMAI CTGCAG 2 cut(s) 1222, 1497
BspPI GGATC 5 cut(s) 406, 666, 697, 960, 1113
BspT104I TTCGAA 1 cut(s) 1003
BsrDI GCAATG 4 cut(s) 202, 1164, 1641, 1850
BsrGI TGTACA 1 cut(s) 1758
BssECI CCNNGG 5 cut(s) 436, 810, 973, 1141, 1419
BssMI GATC 6 cut(s) 398, 658, 689, 952, 1118, 1909
BssNAI GTATAC 1 cut(s) 767
BssT1I CCWWGG 3 cut(s) 810, 973, 1141
Bst1107I GTATAC 1 cut(s) 767
Bst2UI CCWGG 2 cut(s) 437, 569
Bst4CI ACNGT 5 cut(s) 46, 1085, 1236, 1574, 1763
Bst6I CTCTTC 6 cut(s) 596, 1005, 1218, 1308, 1657, 1741
BstAPI GCANNNNNTGC 1 cut(s) 1628
BstAUI TGTACA 1 cut(s) 1758
BstBAI YACGTR 1 cut(s) 1196
BstBI TTCGAA 1 cut(s) 1003
BstC8I GCNNGC 1 cut(s) 1075
BstDEI CTNAG 7 cut(s) 282, 514, 581, 683, 863, 1352, 1440
BstDSI CCRYGG 1 cut(s) 1419
BstEII GGTNACC 2 cut(s) 527, 563
BstF5I GGATG 8 cut(s) 188, 301, 474, 487, 671, 1488, 1816, 1885
BstHHI GCGC 1 cut(s) 25
BstKTI GATC 6 cut(s) 401, 661, 692, 955, 1121, 1912
BstMBI GATC 6 cut(s) 398, 658, 689, 952, 1118, 1909
BstMWI GCNNNNNNNGC 2 cut(s) 354, 1628
BstNI CCWGG 2 cut(s) 437, 569
BstNSI RCATGY 4 cut(s) 61, 1077, 1438, 1628
BstPI GGTNACC 2 cut(s) 527, 563
BstSCI CCNGG 4 cut(s) 435, 477, 567, 1055
BstSFI CTRYAG 2 cut(s) 1218, 1493
BstSLI GKGCMC 1 cut(s) 1624
BstSNI TACGTA 1 cut(s) 1196
BstV1I GCAGC 2 cut(s) 369, 1204
BstV2I GAAGAC 2 cut(s) 43, 54
BstX2I RGATCY 4 cut(s) 658, 689, 952, 1118
BstXI CCANNNNNNTGG 2 cut(s) 539, 758
BstYI RGATCY 4 cut(s) 658, 689, 952, 1118
BstZ17I GTATAC 1 cut(s) 767
Bsu15I ATCGAT 1 cut(s) 735
Bsu36I CCTNAGG 1 cut(s) 1440
BsuRI GGCC 4 cut(s) 834, 1286, 1319, 1712
BsuTUI ATCGAT 1 cut(s) 735
BtgI CCRYGG 1 cut(s) 1419
BtsCI GGATG 8 cut(s) 188, 301, 474, 487, 671, 1488, 1816, 1885
BtsI GCAGTG 1 cut(s) 573
BtsIMutI CAGTG 2 cut(s) 573, 1570
Cac8I GCNNGC 1 cut(s) 1075
CciI TCATGA 1 cut(s) 1912
CfoI GCGC 1 cut(s) 25
Cfr13I GGNCC 3 cut(s) 179, 995, 1711
ClaI ATCGAT 1 cut(s) 735
CsiI ACCWGGT 1 cut(s) 567
Csp6I GTAC 5 cut(s) 332, 872, 1132, 1424, 1759
CspCI CAANNNNNGTGG 2 cut(s) 376, 411
CviQI GTAC 5 cut(s) 332, 872, 1132, 1424, 1759
DdeI CTNAG 7 cut(s) 282, 514, 581, 683, 863, 1352, 1440
DpnI GATC 6 cut(s) 400, 660, 691, 954, 1120, 1911
DpnII GATC 6 cut(s) 398, 658, 689, 952, 1118, 1909
DraI TTTAAA 4 cut(s) 99, 717, 1485, 1839
EaeI YGGCCR 1 cut(s) 1284
Eam1104I CTCTTC 6 cut(s) 596, 1005, 1218, 1308, 1657, 1741
EarI CTCTTC 6 cut(s) 596, 1005, 1218, 1308, 1657, 1741
Eco105I TACGTA 1 cut(s) 1196
Eco130I CCWWGG 3 cut(s) 810, 973, 1141
Eco147I AGGCCT 2 cut(s) 834, 1319
Eco32I GATATC 1 cut(s) 587
Eco47I GGWCC 2 cut(s) 179, 995
Eco81I CCTNAGG 1 cut(s) 1440
Eco91I GGTNACC 2 cut(s) 527, 563
EcoO65I GGTNACC 2 cut(s) 527, 563
EcoRII CCWGG 2 cut(s) 435, 567
EcoRV GATATC 1 cut(s) 587
EcoT14I CCWWGG 3 cut(s) 810, 973, 1141
ErhI CCWWGG 3 cut(s) 810, 973, 1141
FalI AAGNNNNNCTT 2 cut(s) 168, 200
FaqI GGGAC 3 cut(s) 654, 1052, 1273
FbaI TGATCA 1 cut(s) 1909
FblI GTMKAC 1 cut(s) 766
Fnu4HI GCNGC 2 cut(s) 358, 1218
FokI GGATG 8 cut(s) 175, 308, 461, 494, 658, 1475, 1823, 1892
Fsp4HI GCNGC 2 cut(s) 358, 1218
FspBI CTAG 8 cut(s) 26, 416, 630, 843, 1142, 1310, 1601, 1743
GlaI GCGC 1 cut(s) 24
GluI GCNGC 2 cut(s) 358, 1218
GsaI CCCAGC 3 cut(s) 410, 1073, 1590
GsuI CTGGAG 1 cut(s) 419
HaeIII GGCC 4 cut(s) 834, 1286, 1319, 1712
HapII CCGG 3 cut(s) 113, 479, 1057
HhaI GCGC 1 cut(s) 25
Hin6I GCGC 1 cut(s) 23
HinP1I GCGC 1 cut(s) 23
HincII GTYRAC 1 cut(s) 494
HindII GTYRAC 1 cut(s) 494
HinfI GANTC 8 cut(s) 79, 130, 642, 784, 802, 910, 926, 1667
HpaII CCGG 3 cut(s) 113, 479, 1057
HphI GGTGA 1 cut(s) 557
Hpy166II GTNNAC 8 cut(s) 182, 494, 767, 848, 995, 1570, 1622, 1759
Hpy188I TCNGA 1 cut(s) 700
Hpy188III TCNNGA 6 cut(s) 113, 146, 903, 943, 1324, 1913
Hpy8I GTNNAC 8 cut(s) 182, 494, 767, 848, 995, 1570, 1622, 1759
HpyAV CCTTC 6 cut(s) 23, 170, 561, 1330, 1550, 1724
HpyCH4III ACNGT 5 cut(s) 46, 1085, 1236, 1574, 1763
HpyCH4IV ACGT 2 cut(s) 794, 1195
HpyF10VI GCNNNNNNNGC 2 cut(s) 354, 1628
HpyF3I CTNAG 7 cut(s) 282, 514, 581, 683, 863, 1352, 1440
HpySE526I ACGT 2 cut(s) 794, 1195
HspAI GCGC 1 cut(s) 23
Kpn2I TCCGGA 1 cut(s) 112
Ksp22I TGATCA 1 cut(s) 1909
Kzo9I GATC 6 cut(s) 398, 658, 689, 952, 1118, 1909
LmnI GCTCC 1 cut(s) 1446
Lsp1109I GCAGC 2 cut(s) 369, 1204
LweI GCATC 2 cut(s) 1532, 1870
MabI ACCWGGT 1 cut(s) 567
MaeI CTAG 8 cut(s) 26, 416, 630, 843, 1142, 1310, 1601, 1743
MaeII ACGT 2 cut(s) 794, 1195
MaeIII GTNAC 8 cut(s) 236, 455, 527, 563, 571, 918, 1738, 1894
MalI GATC 6 cut(s) 400, 660, 691, 954, 1120, 1911
MboI GATC 6 cut(s) 398, 658, 689, 952, 1118, 1909
MfeI CAATTG 1 cut(s) 1698
MflI RGATCY 4 cut(s) 658, 689, 952, 1118
MhlI GDGCHC 1 cut(s) 1624
MlsI TGGCCA 1 cut(s) 1286
MluNI TGGCCA 1 cut(s) 1286
MlyI GAGTC 2 cut(s) 73, 636
Mox20I TGGCCA 1 cut(s) 1286
MroI TCCGGA 1 cut(s) 112
MroXI GAANNNNTTC 2 cut(s) 1539, 1666
MscI TGGCCA 1 cut(s) 1286
MseI TTAA 7 cut(s) 98, 224, 392, 716, 1380, 1484, 1838
MslI CAYNNNNRTG 1 cut(s) 1551
Msp20I TGGCCA 1 cut(s) 1286
MspI CCGG 3 cut(s) 113, 479, 1057
MspR9I CCNGG 4 cut(s) 437, 479, 569, 1057
MssI GTTTAAAC 1 cut(s) 1485
MunI CAATTG 1 cut(s) 1698
MvaI CCWGG 2 cut(s) 437, 569
MwoI GCNNNNNNNGC 2 cut(s) 354, 1628
NciI CCSGG 2 cut(s) 479, 1057
NdeII GATC 6 cut(s) 398, 658, 689, 952, 1118, 1909
NlaIV GGNNCC 3 cut(s) 1061, 1448, 1713
NmuCI GTSAC 4 cut(s) 563, 571, 918, 1894
NspI RCATGY 4 cut(s) 61, 1077, 1438, 1628
NspV TTCGAA 1 cut(s) 1003
PaeI GCATGC 1 cut(s) 1077
PagI TCATGA 1 cut(s) 1912
PceI AGGCCT 2 cut(s) 834, 1319
PciI ACATGT 2 cut(s) 57, 1624
PdmI GAANNNNTTC 2 cut(s) 1539, 1666
PfeI GAWTC 6 cut(s) 130, 784, 802, 910, 926, 1667
PflMI CCANNNNNTGG 3 cut(s) 198, 992, 1721
PfoI TCCNGGA 1 cut(s) 477
PkrI GCNGC 2 cut(s) 359, 1219
PleI GAGTC 2 cut(s) 73, 636
PmeI GTTTAAAC 1 cut(s) 1485
PpsI GAGTC 2 cut(s) 73, 636
Ppu21I YACGTR 1 cut(s) 1196
PscI ACATGT 2 cut(s) 57, 1624
Psp1406I AACGTT 1 cut(s) 794
Psp6I CCWGG 2 cut(s) 435, 567
PspEI GGTNACC 2 cut(s) 527, 563
PspFI CCCAGC 3 cut(s) 406, 1069, 1586
PspGI CCWGG 2 cut(s) 435, 567
PspN4I GGNNCC 3 cut(s) 1061, 1448, 1713
PspPI GGNCC 3 cut(s) 179, 995, 1711
PstI CTGCAG 2 cut(s) 1222, 1497
PsuI RGATCY 4 cut(s) 658, 689, 952, 1118
RsaI GTAC 5 cut(s) 333, 873, 1133, 1425, 1760
RsaNI GTAC 5 cut(s) 332, 872, 1132, 1424, 1759
RseI CAYNNNNRTG 1 cut(s) 1551
SaqAI TTAA 7 cut(s) 98, 224, 392, 716, 1380, 1484, 1838
SatI GCNGC 2 cut(s) 358, 1218
Sau3AI GATC 6 cut(s) 398, 658, 689, 952, 1118, 1909
Sau96I GGNCC 3 cut(s) 179, 995, 1711
SchI GAGTC 2 cut(s) 73, 636
ScrFI CCNGG 4 cut(s) 437, 479, 569, 1057
SduI GDGCHC 1 cut(s) 1624
SexAI ACCWGGT 1 cut(s) 567
SfaNI GCATC 2 cut(s) 1532, 1870
SfcI CTRYAG 2 cut(s) 1218, 1493
SfuI TTCGAA 1 cut(s) 1003
SinI GGWCC 2 cut(s) 179, 995
SmiMI CAYNNNNRTG 1 cut(s) 1551
SmlI CTYRAG 6 cut(s) 319, 352, 941, 1111, 1451, 1689
SmoI CTYRAG 6 cut(s) 319, 352, 941, 1111, 1451, 1689
SnaBI TACGTA 1 cut(s) 1196
SphI GCATGC 1 cut(s) 1077
SseBI AGGCCT 2 cut(s) 834, 1319
SspI AATATT 1 cut(s) 268
SspMI CTAG 8 cut(s) 26, 416, 630, 843, 1142, 1310, 1601, 1743
StuI AGGCCT 2 cut(s) 834, 1319
StyD4I CCNGG 4 cut(s) 435, 477, 567, 1055
StyI CCWWGG 3 cut(s) 810, 973, 1141
TaaI ACNGT 5 cut(s) 46, 1085, 1236, 1574, 1763
TaiI ACGT 2 cut(s) 797, 1198
TaqI TCGA 5 cut(s) 735, 1003, 1031, 1332, 1369
TatI WGTACW 3 cut(s) 331, 1131, 1758
TfiI GAWTC 6 cut(s) 130, 784, 802, 910, 926, 1667
Tru1I TTAA 7 cut(s) 98, 224, 392, 716, 1380, 1484, 1838
Tru9I TTAA 7 cut(s) 98, 224, 392, 716, 1380, 1484, 1838
TscAI CASTG 2 cut(s) 580, 1577
TseFI GTSAC 4 cut(s) 563, 571, 918, 1894
TseI GCWGC 2 cut(s) 357, 1217
Tsp45I GTSAC 4 cut(s) 563, 571, 918, 1894
TspDTI ATGAA 6 cut(s) 235, 498, 1153, 1245, 1532, 1569
TspGWI ACGGA 3 cut(s) 1165, 1742, 1823
TspRI CASTG 2 cut(s) 580, 1577
Van91I CCANNNNNTGG 3 cut(s) 198, 992, 1721
VneI GTGCAC 1 cut(s) 1620
VpaK11BI GGWCC 2 cut(s) 179, 995
XapI RAATTY 3 cut(s) 421, 1347, 1855
XceI RCATGY 4 cut(s) 61, 1077, 1438, 1628
XcmI CCANNNNNNNNNTGG 2 cut(s) 195, 633
XmaJI CCTAGG 1 cut(s) 1141
XmiI GTMKAC 1 cut(s) 766
XmnI GAANNNNTTC 2 cut(s) 1539, 1666
XspI CTAG 8 cut(s) 26, 416, 630, 843, 1142, 1310, 1601, 1743
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.