MD03G1180600.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
24800319 .. 24803241
2923 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1180600.v1.1.491

Sequence Viewer

Length: 2199 bp
ATGCACATAACAGGTAGCATACCCAGAGAAATAGGCAACTTAACAATGGTGAAGGGCATAGACCTTGACTTCAACAAGTTCGAAGGTATACTGTATGACTTAGGTTTTGTTACATGTATACTAGCAGATGCCTTCACACACTGTGTTTTAGGTCAGCTGGAGGAGTTGTATGTGAAGTCCAATGTCCTAAAAGGCTCTACTCTTGTGCCTGTCCTCAACATATCTTCTTTGACTACTTTGGCTCTATATGGAAACAACATGAGTGGCAGTCTTCCGGACAATATATGTGAGCATCTTCCAAGTATTCGAATTTTGAATTTGGGTAAAAACCAGTTTGACGGTCTGATTCCCTCCAAACTGTGGCAATGCAAAGAGCTTCGTGAATTGGTATTAGGTGTTAACAATTTCTGTGGAAGCATACCCATAAGTCTTGGCAATTTGACCTACTTAACCAAGATTCAGATTGATGACAATAATTTAACAGGTACAATACCGGATGAGATTGGTGATCTTCCGCAGTTAGAGATTTTGGGATTGGGGATTAATAATCTCAATGGCGTCATCCCATCCAAACTCTTCAATAACTCCATGATAAGAGGAATAGGGCTTTATTTTAATCAGCTCTCAGGAAGCCTCCCAGCATACATAGGTCTTAACGTTCCAAACCTAGAATACCTTGAAGTAGCCAGAAATAACCTCGTGGGCGGACTACTCCCTAACCTCTCCAATGCTTCCAAGCTCAGGGTGCTAGACATGAACACAAACTCATTTACTGGGTTTCTTCCTAGCACGCTCTGTTCCTTGAAAAACCTCGAGGTTCTTAACTTGCACTCGAATAATTTGGCAATTGATGCTTCTACTCCACAAGCAGCAAGCACTCTCTCTTGCTTGTTTAATCTCAGAAATTTGACAAGATTGTCCTTGGGAGACAATCCACTAAACACCACGATTCCAGCTTCTCATAGGAATCTCTCTACGTCACTCCTATATGTGAATTTAATCCGTTCCAACATCAGGGGCAACATTCCAGTTGATATTGGCAACTTGAGCAGCTTGATATCACTACAACTGGGAAACAATCAGTTGAGTGGAGCAATTCCAACTTCAATACAAAGGCTACAAAATCTCCAAGGTTTGTATTTGTACAATAACGAACTGGGAGGACATATCCCATATGAACTCTGTCAACTAAACAACCTAGCCGAGTTATTTTTGGGTGGTAATCGGCTCTCTGGTTATATTCCTTCCTGCTTGGGTACTTTGGCAGTAGCTCTAAGAAGTCTATCGTTAGGGTCCAATTTGTTAACTTCAAAAATTCCATCTTCCTTGTGGGAACTCAAGTATATACTGCACCTAAACTTGTCATCCAATTCTCTAGTTGGACCACTCTCAGAAGACATCGGAAAGTTGAAAAATGTGGTGGATATAGATTTATCAAATAACCATTTCTCGGGAAACATTCCCGATAGCATTGGGGGTCTTCAGAATATGATTAATTTTTCCTTGGCAAACAATTATTTAGAAGGCCCTATTCCCAGTTCATTTGAAACCTTGCTAAGCCTAGAATTCTTGGATTTGTCCAAAAACAATCTATCTGGAGTGATCCCGAAGTCATTCAAAGCACTCTCGCATCTCAAGCATTTGAATTTGTCTTTCAACAAACTCCAAGGAGAAATTCCAACAGGCGGGCCTTTCGGAAACTTCTCTGCTGATTCATTTGTATCAAACGGTGCGCTTTGCGGTGCTTCCCGACTCCACGTTCCATTGTGCAAATATAAAACAGAAGTTAAGCCAAAATGGAGGAAAGCTAAATATATCATCTCAGGGGTCATGTCAGCAATACTCCTAGCGGCCGCTGCATTGATTCTGATACTATGCAAGAAAAGAAATGTCGAAGTTGTAAGAGAAACTGCCTCGCTACATCAAGTTCTTTGGAGAAGAGTTTCGCACCTAGAACTTGTAAAGGCGACAAATGGACTTCACGAGAGTAACTTACTAGGCACAGGGGGGTTTAGCTCAGTATACAGAGGAACACTGTTAGACGGAATAGATATCGCCGTCAAGGTTTTCAATTTACAGCTAGAAGGGGCATTCAAGAGTTTTGATAAGGAATGTGAAATGCTAAGCAATATCCGTCACCGGAATCTTATTAAAATCATAAGTTATTGCGATGAACTTAGTACTTCAATTGATGCCTAA

Protein Analysis

733

Amino Acids

79.64

Weight (kDa)

7.54

Isoelectric Point (pI)

30.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 76 - 135 3.8e-06 Leucine rich repeat
LRR_8 PF13855 351 - 410 4e-07 Leucine rich repeat
LRR_8 PF13855 500 - 555 4.9e-09 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 663 - 724 8e-06 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 916
AbsI CCTCGAGG 1 cut(s) 812
AccB7I CCANNNNNTGG 1 cut(s) 360
AccI GTMKAC 3 cut(s) 88, 118, 2022
AccIII TCCGGA 1 cut(s) 274
AciI CCGC 6 cut(s) 515, 705, 1686, 1740, 1850, 1854
AclI AACGTT 1 cut(s) 657
AclWI GGATC 1 cut(s) 1597
AcoI YGGCCR 1 cut(s) 1851
AcsI RAATTY 8 cut(s) 309, 316, 904, 994, 1314, 1565, 1645, 1674
AcuI CTGAAG 1 cut(s) 1466
AcyI GRCGYC 1 cut(s) 558
AdeI CACNNNGTG 1 cut(s) 143
AfaI GTAC 4 cut(s) 487, 1145, 1258, 2182
AfiI CCNNNNNNNGG 5 cut(s) 360, 741, 1014, 1450, 1685
AflIII ACRYGT 1 cut(s) 113
AjuI GAANNNNNNNTTGG 2 cut(s) 1659, 1691
Alw26I GTCTC 1 cut(s) 921
AlwI GGATC 1 cut(s) 1597
Ama87I CYCGRG 2 cut(s) 812, 1450
Aor13HI TCCGGA 1 cut(s) 274
AoxI GGCC 3 cut(s) 1525, 1688, 1851
ApeKI GCWGC 3 cut(s) 869, 1050, 1856
ApoI RAATTY 8 cut(s) 309, 316, 904, 994, 1314, 1565, 1645, 1674
ArsI GACNNNNNNTTYG 2 cut(s) 89, 121
AseI ATTAAT 2 cut(s) 543, 1494
Asp700I GAANNNNTTC 2 cut(s) 1613, 1942
AspLEI GCGC 1 cut(s) 1735
AspS9I GGNCC 4 cut(s) 1293, 1382, 1526, 1688
AsuHPI GGTGA 3 cut(s) 61, 518, 2129
AsuII TTCGAA 2 cut(s) 81, 307
AvaI CYCGRG 2 cut(s) 812, 1450
AvaII GGWCC 2 cut(s) 1293, 1382
BauI CACGAG 2 cut(s) 698, 1982
BbsI GAAGAC 3 cut(s) 263, 1401, 1472
BbvI GCAGC 3 cut(s) 881, 1062, 1843
BccI CCATC 2 cut(s) 574, 1327
BceAI ACGGC 1 cut(s) 2042
BcoDI GTCTC 1 cut(s) 921
BisI GCNGC 5 cut(s) 870, 1051, 1851, 1854, 1857
BlpI GCTNAGC 2 cut(s) 1556, 2123
BlsI GCNGC 5 cut(s) 871, 1052, 1852, 1855, 1858
BmcAI AGTACT 1 cut(s) 2182
Bme18I GGWCC 2 cut(s) 1293, 1382
BmeT110I CYCGRG 2 cut(s) 812, 1450
BmgT120I GGNCC 4 cut(s) 1293, 1382, 1526, 1688
BmiI GGNNCC 1 cut(s) 1294
BmrI ACTGGG 4 cut(s) 783, 1079, 1166, 1530
BmsI GCATC 5 cut(s) 118, 301, 841, 1639, 2182
BmuI ACTGGG 4 cut(s) 783, 1079, 1166, 1530
BpiI GAAGAC 3 cut(s) 263, 1401, 1472
BpmI CTGGAG 2 cut(s) 179, 1617
Bpu10I CCTNAGC 1 cut(s) 740
Bpu1102I GCTNAGC 2 cut(s) 1556, 2123
Bpu14I TTCGAA 2 cut(s) 81, 307
BpuEI CTTGAG 3 cut(s) 1066, 1322, 1619
BsaHI GRCGYC 1 cut(s) 558
BsaJI CCNNGG 4 cut(s) 921, 1129, 1503, 1666
BsaWI WCCGGW 3 cut(s) 274, 493, 2139
BsaXI ACNNNNNCTCC 4 cut(s) 152, 182, 1110, 1140
Bsc4I CCNNNNNNNGG 5 cut(s) 360, 741, 1014, 1450, 1685
Bse1I ACTGG 6 cut(s) 331, 778, 1028, 1074, 1161, 1536
Bse3DI GCAATG 1 cut(s) 371
BseAI TCCGGA 1 cut(s) 274
BseDI CCNNGG 4 cut(s) 921, 1129, 1503, 1666
BseGI GGATG 4 cut(s) 502, 561, 566, 1364
BseLI CCNNNNNNNGG 5 cut(s) 360, 741, 1014, 1450, 1685
BseMI GCAATG 1 cut(s) 371
BseMII CTCAG 6 cut(s) 639, 754, 913, 1404, 1836, 2031
BseNI ACTGG 6 cut(s) 331, 778, 1028, 1074, 1161, 1536
BseRI GAGGAG 1 cut(s) 176
BseX3I CGGCCG 1 cut(s) 1851
BseXI GCAGC 3 cut(s) 881, 1062, 1843
BseYI CCCAGC 1 cut(s) 637
BsgI GTGCAG 1 cut(s) 1334
Bsh1285I CGRYCG 1 cut(s) 1854
BshFI GGCC 3 cut(s) 1527, 1690, 1853
BsiEI CGRYCG 1 cut(s) 1854
BsiHKCI CYCGRG 2 cut(s) 812, 1450
BsiSI CCGG 3 cut(s) 275, 494, 2140
BslI CCNNNNNNNGG 5 cut(s) 360, 741, 1014, 1450, 1685
BsmAI GTCTC 1 cut(s) 921
BsmI GAATGC 1 cut(s) 2090
BsnI GGCC 3 cut(s) 1527, 1690, 1853
BsoBI CYCGRG 2 cut(s) 812, 1450
Bsp119I TTCGAA 2 cut(s) 81, 307
Bsp13I TCCGGA 1 cut(s) 274
Bsp1407I TGTACA 1 cut(s) 1143
Bsp143I GATC 2 cut(s) 508, 1602
Bsp1720I GCTNAGC 2 cut(s) 1556, 2123
BspACI CCGC 6 cut(s) 515, 705, 1686, 1740, 1850, 1854
BspANI GGCC 3 cut(s) 1527, 1690, 1853
BspCNI CTCAG 6 cut(s) 638, 753, 912, 1403, 1835, 2030
BspEI TCCGGA 1 cut(s) 274
BspLI GGNNCC 1 cut(s) 1294
BspPI GGATC 1 cut(s) 1597
BspT104I TTCGAA 2 cut(s) 81, 307
BsrDI GCAATG 1 cut(s) 371
BsrGI TGTACA 1 cut(s) 1143
BsrI ACTGG 6 cut(s) 331, 778, 1028, 1074, 1161, 1536
BssECI CCNNGG 4 cut(s) 921, 1129, 1503, 1666
BssMI GATC 2 cut(s) 508, 1602
BssNAI GTATAC 3 cut(s) 89, 119, 2023
BssNI GRCGYC 1 cut(s) 558
BssSI CACGAG 2 cut(s) 698, 1982
BssT1I CCWWGG 4 cut(s) 921, 1129, 1503, 1666
Bst1107I GTATAC 3 cut(s) 89, 119, 2023
Bst2BI CACGAG 2 cut(s) 698, 1982
Bst4CI ACNGT 6 cut(s) 93, 143, 341, 360, 1730, 2037
Bst6I CTCTTC 2 cut(s) 581, 1933
BstACI GRCGYC 1 cut(s) 558
BstAPI GCANNNNNTGC 1 cut(s) 851
BstAUI TGTACA 1 cut(s) 1143
BstBI TTCGAA 2 cut(s) 81, 307
BstC8I GCNNGC 3 cut(s) 791, 874, 1688
BstF5I GGATG 4 cut(s) 502, 561, 566, 1364
BstHHI GCGC 1 cut(s) 1735
BstKTI GATC 2 cut(s) 511, 1605
BstMAI GTCTC 1 cut(s) 921
BstMBI GATC 2 cut(s) 508, 1602
BstMCI CGRYCG 1 cut(s) 1854
BstMWI GCNNNNNNNGC 5 cut(s) 745, 851, 1047, 1636, 1856
BstNSI RCATGY 1 cut(s) 117
BstV1I GCAGC 3 cut(s) 881, 1062, 1843
BstV2I GAAGAC 3 cut(s) 263, 1401, 1472
BstZ17I GTATAC 3 cut(s) 89, 119, 2023
BstZI CGGCCG 1 cut(s) 1851
BsuRI GGCC 3 cut(s) 1527, 1690, 1853
BtgZI GCGATG 1 cut(s) 2184
BtsCI GGATG 4 cut(s) 502, 561, 566, 1364
BtsIMutI CAGTG 2 cut(s) 139, 2033
Cac8I GCNNGC 3 cut(s) 791, 874, 1688
CciNI GCGGCCGC 1 cut(s) 1851
CfoI GCGC 1 cut(s) 1735
Cfr13I GGNCC 4 cut(s) 1293, 1382, 1526, 1688
CseI GACGC 1 cut(s) 547
Csp6I GTAC 4 cut(s) 486, 1144, 1257, 2181
CspCI CAANNNNNGTGG 4 cut(s) 244, 279, 391, 426
CviAII CATG 5 cut(s) 114, 259, 589, 754, 1831
CviQI GTAC 4 cut(s) 486, 1144, 1257, 2181
DpnI GATC 2 cut(s) 510, 1604
DpnII GATC 2 cut(s) 508, 1602
DraIII CACNNNGTG 1 cut(s) 143
DrdI GACNNNNNNGTC 1 cut(s) 916
DseDI GACNNNNNNGTC 1 cut(s) 916
EaeI YGGCCR 1 cut(s) 1851
EagI CGGCCG 1 cut(s) 1851
Eam1104I CTCTTC 2 cut(s) 581, 1933
EarI CTCTTC 2 cut(s) 581, 1933
EciI GGCGGA 1 cut(s) 720
EclXI CGGCCG 1 cut(s) 1851
Eco130I CCWWGG 4 cut(s) 921, 1129, 1503, 1666
Eco32I GATATC 2 cut(s) 1059, 2053
Eco47I GGWCC 2 cut(s) 1293, 1382
Eco52I CGGCCG 1 cut(s) 1851
Eco57I CTGAAG 1 cut(s) 1466
Eco88I CYCGRG 2 cut(s) 812, 1450
EcoO109I RGGNCCY 1 cut(s) 1526
EcoRI GAATTC 1 cut(s) 1565
EcoRV GATATC 2 cut(s) 1059, 2053
EcoT14I CCWWGG 4 cut(s) 921, 1129, 1503, 1666
ErhI CCWWGG 4 cut(s) 921, 1129, 1503, 1666
FaeI CATG 5 cut(s) 117, 262, 592, 757, 1834
FatI CATG 5 cut(s) 113, 258, 588, 753, 1830
FauI CCCGC 1 cut(s) 1679
FauNDI CATATG 1 cut(s) 1174
FblI GTMKAC 3 cut(s) 88, 118, 2022
Fnu4HI GCNGC 5 cut(s) 870, 1051, 1851, 1854, 1857
FokI GGATG 4 cut(s) 509, 548, 553, 1351
Fsp4HI GCNGC 5 cut(s) 870, 1051, 1851, 1854, 1857
GlaI GCGC 1 cut(s) 1734
GluI GCNGC 5 cut(s) 870, 1051, 1851, 1854, 1857
GsaI CCCAGC 1 cut(s) 641
GsuI CTGGAG 2 cut(s) 179, 1617
HaeIII GGCC 3 cut(s) 1527, 1690, 1853
HapII CCGG 3 cut(s) 275, 494, 2140
HgaI GACGC 1 cut(s) 547
HhaI GCGC 1 cut(s) 1735
Hin1I GRCGYC 1 cut(s) 558
Hin1II CATG 5 cut(s) 117, 262, 592, 757, 1834
Hin6I GCGC 1 cut(s) 1733
HinP1I GCGC 1 cut(s) 1733
HincII GTYRAC 3 cut(s) 400, 1187, 1305
HindII GTYRAC 3 cut(s) 400, 1187, 1305
HinfI GANTC 8 cut(s) 346, 457, 949, 967, 1712, 1752, 1864, 2143
HpaI GTTAAC 2 cut(s) 400, 1305
HpaII CCGG 3 cut(s) 275, 494, 2140
HphI GGTGA 3 cut(s) 61, 518, 2129
Hpy166II GTNNAC 6 cut(s) 89, 119, 400, 1187, 1305, 2023
Hpy188I TCNGA 8 cut(s) 345, 462, 902, 1393, 1403, 1485, 1697, 1869
Hpy8I GTNNAC 6 cut(s) 89, 119, 400, 1187, 1305, 2023
HpyAV CCTTC 6 cut(s) 46, 77, 142, 1254, 1517, 2078
HpyCH4III ACNGT 6 cut(s) 93, 143, 341, 360, 1730, 2037
HpyCH4IV ACGT 3 cut(s) 657, 977, 1758
HpyCH4V TGCA 7 cut(s) 4, 369, 829, 1351, 1770, 1859, 1878
HpyF10VI GCNNNNNNNGC 5 cut(s) 745, 851, 1047, 1636, 1856
HpySE526I ACGT 3 cut(s) 657, 977, 1758
Hsp92I GRCGYC 1 cut(s) 558
Hsp92II CATG 5 cut(s) 117, 262, 592, 757, 1834
HspAI GCGC 1 cut(s) 1733
Kpn2I TCCGGA 1 cut(s) 274
KspAI GTTAAC 2 cut(s) 400, 1305
Kzo9I GATC 2 cut(s) 508, 1602
LmnI GCTCC 1 cut(s) 1091
Lsp1109I GCAGC 3 cut(s) 881, 1062, 1843
LweI GCATC 5 cut(s) 118, 301, 841, 1639, 2182
MaeII ACGT 3 cut(s) 657, 977, 1758
MaeIII GTNAC 4 cut(s) 109, 978, 1988, 2135
MalI GATC 2 cut(s) 510, 1604
MboI GATC 2 cut(s) 508, 1602
MfeI CAATTG 2 cut(s) 846, 2187
MlyI GAGTC 1 cut(s) 1746
MmeI TCCRAC 4 cut(s) 1032, 1124, 1360, 1703
MroI TCCGGA 1 cut(s) 274
MroXI GAANNNNTTC 2 cut(s) 1613, 1942
MspA1I CMGCKG 2 cut(s) 157, 1856
MspI CCGG 3 cut(s) 275, 494, 2140
MunI CAATTG 2 cut(s) 846, 2187
Mva1269I GAATGC 1 cut(s) 2090
MwoI GCNNNNNNNGC 5 cut(s) 745, 851, 1047, 1636, 1856
NdeI CATATG 1 cut(s) 1174
NdeII GATC 2 cut(s) 508, 1602
NlaIII CATG 5 cut(s) 117, 262, 592, 757, 1834
NlaIV GGNNCC 1 cut(s) 1294
NmeAIII GCCGAG 1 cut(s) 1228
NmuCI GTSAC 2 cut(s) 978, 2135
NotI GCGGCCGC 1 cut(s) 1851
NspI RCATGY 1 cut(s) 117
NspV TTCGAA 2 cut(s) 81, 307
PaeR7I CTCGAG 1 cut(s) 812
PciI ACATGT 1 cut(s) 113
PctI GAATGC 1 cut(s) 2090
PdmI GAANNNNTTC 2 cut(s) 1613, 1942
PfeI GAWTC 7 cut(s) 346, 457, 949, 967, 1712, 1864, 2143
PflMI CCANNNNNTGG 1 cut(s) 360
PkrI GCNGC 5 cut(s) 871, 1052, 1852, 1855, 1858
PleI GAGTC 1 cut(s) 1746
PpsI GAGTC 1 cut(s) 1746
PscI ACATGT 1 cut(s) 113
PshBI ATTAAT 2 cut(s) 543, 1494
Psp1406I AACGTT 1 cut(s) 657
PspFI CCCAGC 1 cut(s) 637
PspN4I GGNNCC 1 cut(s) 1294
PspPI GGNCC 4 cut(s) 1293, 1382, 1526, 1688
PspXI VCTCGAGB 1 cut(s) 812
PvuII CAGCTG 1 cut(s) 157
RsaI GTAC 4 cut(s) 487, 1145, 1258, 2182
RsaNI GTAC 4 cut(s) 486, 1144, 1257, 2181
SatI GCNGC 5 cut(s) 870, 1051, 1851, 1854, 1857
Sau3AI GATC 2 cut(s) 508, 1602
Sau96I GGNCC 4 cut(s) 1293, 1382, 1526, 1688
ScaI AGTACT 1 cut(s) 2182
SchI GAGTC 1 cut(s) 1746
SfaNI GCATC 5 cut(s) 118, 301, 841, 1639, 2182
Sfr274I CTCGAG 1 cut(s) 812
SfuI TTCGAA 2 cut(s) 81, 307
SinI GGWCC 2 cut(s) 1293, 1382
SlaI CTCGAG 1 cut(s) 812
SmlI CTYRAG 4 cut(s) 812, 1045, 1337, 1634
SmoI CTYRAG 4 cut(s) 812, 1045, 1337, 1634
SsiI CCGC 6 cut(s) 515, 705, 1686, 1740, 1850, 1854
StyI CCWWGG 4 cut(s) 921, 1129, 1503, 1666
TaaI ACNGT 6 cut(s) 93, 143, 341, 360, 1730, 2037
TaiI ACGT 3 cut(s) 660, 980, 1761
TaqI TCGA 5 cut(s) 81, 307, 813, 833, 1893
TatI WGTACW 2 cut(s) 1143, 2180
TauI GCSGC 2 cut(s) 1853, 1856
TfiI GAWTC 7 cut(s) 346, 457, 949, 967, 1712, 1864, 2143
TscAI CASTG 2 cut(s) 146, 2040
TseFI GTSAC 2 cut(s) 978, 2135
TseI GCWGC 3 cut(s) 869, 1050, 1856
Tsp45I GTSAC 2 cut(s) 978, 2135
TspDTI ATGAA 5 cut(s) 770, 1191, 1530, 1704, 2187
TspGWI ACGGA 3 cut(s) 992, 2058, 2123
TspRI CASTG 2 cut(s) 146, 2040
Van91I CCANNNNNTGG 1 cut(s) 360
VpaK11BI GGWCC 2 cut(s) 1293, 1382
VspI ATTAAT 2 cut(s) 543, 1494
XapI RAATTY 8 cut(s) 309, 316, 904, 994, 1314, 1565, 1645, 1674
XceI RCATGY 1 cut(s) 117
XcmI CCANNNNNNNNNTGG 1 cut(s) 1326
XhoI CTCGAG 1 cut(s) 812
XmiI GTMKAC 3 cut(s) 88, 118, 2022
XmnI GAANNNNTTC 2 cut(s) 1613, 1942
ZrmI AGTACT 1 cut(s) 2182
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.