RchiOBHm_Chr4g0403171

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
22228864 .. 22232097
3234 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ37493

Sequence Viewer

Length: 2676 bp
ATGTCCTATAACGTCCTTACTGGTTCACTTCCTTCTTCCCTGTTTAACCTGTCTTCTTTATGTACTTTTTCTGTGCACAAAAATTACCTTTCTGGAAGTTTTCTTGATGTTGATCTCTGCCATTCTTGGCCTAGACTTCAATTCCTTTCTCTTACTGACAACAAATTCACTGGCCAGCTTCCTTACCTCAGCAATTGTACAGAGCTTGTCATATTGTCTTTATCACAAAACAAGTTTGTGGGAAAAATTCCAGTAGATATTGGCAACTTCAAAAACCTTGAAGAACTTTATCTTGATTTTAATGGCCTCACTGGTACTATACCTCCTACCATAGGTAACTTGTCCAGCTTGAAATCCTTGGGTTTAACGCAGAATAACGTTAAGGGAAGCATACCTCGTGATTTAGGACGTCTTTCTAGATTGGTCAAATTTTTGATTCGTAGGAATGGCCTAAGCGGACCAGTGCCTCCAGAAATATTCAATATCTCTTCTCTGCAAGTTATTGAAGCATCCGATAATGCCCTTTCAGGAAAGTTTCCTTCCTCTTCTGCAGTTCGGCTTCCTAGCATTGAATTCATCTCTTTTGCTAACAATAAAATTACTGGACATGTCCCATCCTATTTTGCAAATTTTACAAAGCTCCATTCATTTCAGCTTAAATCTCCTCGAAACTCTTCATCTCGGGGAAATCAATTAACAGGAGATCCCGGAGTTCCTACACTTGATTTTCTTTCTTCTTTGTTTAATTGCCCTTTCCTGAAAGAATTAGTTCTGTCTGAGAATCCTTTAAATGGCACCATACCAAACTCCTTTGGAAATTCTTCTTCTCCTCTCCAGTTGTTTTGCATAGACAAGTGCCAGATTAAGGGCCACATACCCAAGGGAATTGGTTCTTTGAAAAGCTTGACGCGCCTTTGTTGGGCTAACAACAATCTGAGTGGAAATATACCAGAGTCAATTGGAGGTTTGGAGAGGCTGCAAAGATTGAATCTTGGCAACAACAGTATAGAAGGTTCTATTCCCGACGAGCTTTGTCTTTTGAGGAACCTGGGGGAACTATCACTACAAAATAATAAAATCTCTGAATCAATCCCAACTTGCATAGGAAACCTCATCCACCTTCAGAGTGTTTTCCTAAGTTCCAAGAGATTGACATCATCAGTACCATTGGGTTTATGGGACCTTGAAAATCTCCTGTTCCTAGATCTGTCAATCAATTCTTTTTATGGGAACTTACCTCCAAGGTTGAGCAAGTTGAATGCTATTCAAGAGATAGATTTATCTCAAAACCAATTTACCGGAAACATTTCAAGCACCATAGGCAGTTTGCAAACTCTGAGCTCTCTTAATCTGTCACACAACTTCTTTACAGGTTCTGTTCCACAAACTTTTTGTGATCAGCTGAAAGGGTTGGAATTGTTGGACTTATCATTCAATAATCTTTCTGGTGCAATACCAAAGTGTCTTGAGAAACTCAAATTTCTCAATTACTTAAATCTCTCGTTCAACTACCTGTCCGGAGAGGTCCCTTCTGGAGGACGTTTCCTCAACTTCAGTGCCCAGTCATTTTTGGAGAATAAAGTACTATGTGGGAGACGAGAGTTTGGAGTCCCACCTTGCACGACTCATAGGACGCAAAAATCAAAAGTGGCCACTCGTTTGCTGGCCAAATATGTTCTTCCAGCCATTGCATCAACACTGATTCTCATAGCCCTCTGTTACATGTTGACAAGGTATGGAGAAAGAAAGAGAGGCAAGACTTCGAGTTCAGCTGAACAGTTAACAACAGTGGAGCATATTGTGATATCATATCAAGAACTCCGTCAGGCTACAAATGACTTTTGTGAAAGAAACTTGCTTGGAGTGGGAAGTTTTGGCTCGGTGTACAAGGGGATACTGTCTAATGGGATAACCATTGCTGTCAAAGTTCTTAAGCTGGAAATGGAGGGTGCTGTAAAAAGTTTTGATGCAGAATGCAAGGTGTGGAGAACAAACCGGCATAGGAATCTTGTTAAGGTCATAACTACATGTTCTAGCCCTGAAATAAGAGCTTTGGTGCTGCAGTACATGTCTAATGGCAGTCTTGAGAAGTGGTTATACTCTCACAACTACTGTCTCAGTATCCTGCAAAGAGTGAGCATGTTAATCGATATTGCATCTGCTTTGGAATATCTCCATCATGGTCATGCAGAAACCGTGGTGCACTGTGATGTGAAGCCTGGCAATGTCCTTCTTGATGAAGACATGGTTGCACATCTTGCAGACTTCGGTCTCGCAAAAATTTTAGCAAAAAATAAAGACGCAACACAGACAAGAACCATCGGTACTGTGGGTTATGCAGCGCCAGGAAAAGTGTCCAGAAGTGGTGATGTTTATAGCTTCGGGATAATGTTGCTGGAAATAATGGCGAGAAAGAAACCTACTGATGAAATGTTTGCTGGAGAAGTGACTTTGAGGCAATGGGTAAATGTGTCTATCCCTGATAATGTTCTAGAAGTGGTGGATGCTGGCTTATTGAGCTTAGAAGAGGGAAGAGACATGTTTGCCACAGAATCTATCCTTATGTTCATCCTCGAAATAGGCTTGAGGTGTTCCGAAGAAGTAGCAGAGGATAGAATGGACATCAAGGATGTGGTGCCCAAGCTCAAGAAAATAAAAGTGGCACTACAAGAATGA

Protein Analysis

891

Amino Acids

98.18

Weight (kDa)

8.51

Isoelectric Point (pI)

39.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 58 - 170 5.6e-07 Leucine-rich repeat region
LRR_8 PF13855 92 - 151 6.6e-06 Leucine rich repeat
LRR_14 PF23598 281 - 510 5.6e-14 Leucine-rich repeat region
LRR_8 PF13855 302 - 360 5.1e-06 Leucine rich repeat
LRR_8 PF13855 445 - 505 1.8e-08 Leucine rich repeat
Pkinase PF00069 618 - 809 2.3e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 619 - 815 8.7e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 412
AccB1I GGYRCC 2 cut(s) 794, 2635
AccII CGCG 1 cut(s) 910
AccIII TCCGGA 1 cut(s) 1517
AciI CCGC 1 cut(s) 456
AclI AACGTT 1 cut(s) 378
AclWI GGATC 1 cut(s) 698
AcoI YGGCCR 3 cut(s) 172, 1650, 1665
AcsI RAATTY 8 cut(s) 164, 246, 428, 572, 628, 817, 1478, 2280
AcuI CTGAAG 2 cut(s) 1106, 1537
AcyI GRCGYC 1 cut(s) 409
AfaI GTAC 8 cut(s) 64, 199, 316, 1164, 1584, 1886, 2066, 2326
AfiI CCNNNNNNNGG 5 cut(s) 332, 791, 865, 919, 1535
AflII CTTAAG 1 cut(s) 1931
AflIII ACRYGT 5 cut(s) 607, 1722, 2027, 2067, 2538
AjnI CCWGG 3 cut(s) 1047, 2218, 2344
Alw21I GWGCWC 3 cut(s) 78, 1343, 2205
Alw26I GTCTC 4 cut(s) 1588, 2120, 2276, 2529
Alw44I GTGCAC 2 cut(s) 74, 2201
AlwI GGATC 1 cut(s) 698
AlwNI CAGNNNCTG 1 cut(s) 1376
Ama87I CYCGRG 1 cut(s) 681
Aor13HI TCCGGA 1 cut(s) 1517
AoxI GGCC 7 cut(s) 128, 172, 304, 448, 868, 1650, 1665
ApaLI GTGCAC 2 cut(s) 74, 2201
ApeKI GCWGC 3 cut(s) 976, 2059, 2339
ApoI RAATTY 8 cut(s) 164, 246, 428, 572, 628, 817, 1478, 2280
Asp700I GAANNNNTTC 5 cut(s) 673, 768, 820, 889, 1306
AspLEI GCGC 2 cut(s) 912, 2344
AspS9I GGNCC 4 cut(s) 458, 868, 1180, 1525
AsuC2I CCSGG 1 cut(s) 708
AsuHPI GGTGA 1 cut(s) 2378
AvaI CYCGRG 1 cut(s) 681
AvaII GGWCC 3 cut(s) 458, 1180, 1525
BaeGI GKGCMC 4 cut(s) 78, 1561, 2205, 2640
BalI TGGCCA 3 cut(s) 174, 1652, 1667
BanI GGYRCC 2 cut(s) 794, 2635
BanII GRGCYC 1 cut(s) 1343
BarI GAAGNNNNNNTAC 2 cut(s) 2081, 2113
BauI CACGAG 1 cut(s) 396
BbsI GAAGAC 2 cut(s) 45, 2247
Bbv12I GWGCWC 3 cut(s) 78, 1343, 2205
BbvCI CCTCAGC 1 cut(s) 188
BbvI GCAGC 3 cut(s) 963, 2046, 2351
BccI CCATC 3 cut(s) 622, 2184, 2327
BcgI CGANNNNNNTGC 2 cut(s) 2128, 2162
BciT130I CCWGG 3 cut(s) 1049, 2220, 2346
BciVI GTATCC 2 cut(s) 1887, 2132
BclI TGATCA 1 cut(s) 1396
BcnI CCSGG 1 cut(s) 708
BcoDI GTCTC 4 cut(s) 1588, 2120, 2276, 2529
BfaI CTAG 6 cut(s) 132, 417, 564, 1202, 2034, 2492
BfmI CTRYAG 2 cut(s) 549, 2060
BfoI RGCGCY 1 cut(s) 2345
BfrI CTTAAG 1 cut(s) 1931
BfuI GTATCC 2 cut(s) 1887, 2132
BglII AGATCT 1 cut(s) 1204
BisI GCNGC 3 cut(s) 977, 2060, 2340
BlsI GCNGC 3 cut(s) 978, 2061, 2341
BmcAI AGTACT 1 cut(s) 1584
Bme1390I CCNGG 4 cut(s) 708, 1049, 2220, 2346
Bme18I GGWCC 3 cut(s) 458, 1180, 1525
BmeT110I CYCGRG 1 cut(s) 681
BmgT120I GGNCC 4 cut(s) 458, 868, 1180, 1525
BmiI GGNNCC 5 cut(s) 796, 1046, 1181, 1527, 2637
BmrFI CCNGG 4 cut(s) 708, 1049, 2220, 2346
BmrI ACTGGG 1 cut(s) 1555
BmsI GCATC 5 cut(s) 518, 1700, 1957, 2165, 2494
BmuI ACTGGG 1 cut(s) 1555
BoxI GACNNNNGTC 1 cut(s) 2268
BpiI GAAGAC 2 cut(s) 45, 2247
BpmI CTGGAG 4 cut(s) 453, 818, 1554, 2460
Bpu10I CCTNAGC 2 cut(s) 188, 452
BpuEI CTTGAG 4 cut(s) 1487, 2105, 2605, 2630
BpuMI CCSGG 1 cut(s) 708
Bsa29I ATCGAT 1 cut(s) 2148
BsaBI GATNNNNATC 2 cut(s) 111, 1153
BsaHI GRCGYC 1 cut(s) 409
BsaI GGTCTC 1 cut(s) 2276
BsaJI CCNNGG 5 cut(s) 357, 879, 1048, 1241, 2196
BsaWI WCCGGW 2 cut(s) 1298, 1517
BsaXI ACNNNNNCTCC 2 cut(s) 307, 337
Bsc4I CCNNNNNNNGG 5 cut(s) 332, 791, 865, 919, 1535
Bse118I RCCGGY 1 cut(s) 1995
Bse1I ACTGG 8 cut(s) 25, 175, 251, 316, 461, 607, 835, 1561
Bse3DI GCAATG 4 cut(s) 1686, 1914, 2230, 2465
Bse8I GATNNNNATC 2 cut(s) 111, 1153
BseAI TCCGGA 1 cut(s) 1517
BseBI CCWGG 3 cut(s) 1049, 2220, 2346
BseCI ATCGAT 1 cut(s) 2148
BseDI CCNNGG 5 cut(s) 357, 879, 1048, 1241, 2196
BseGI GGATG 6 cut(s) 509, 614, 1113, 2509, 2568, 2635
BseJI GATNNNNATC 2 cut(s) 111, 1153
BseLI CCNNNNNNNGG 5 cut(s) 332, 791, 865, 919, 1535
BseMI GCAATG 4 cut(s) 1686, 1914, 2230, 2465
BseMII CTCAG 5 cut(s) 202, 768, 926, 1328, 2131
BseNI ACTGG 8 cut(s) 25, 175, 251, 316, 461, 607, 835, 1561
BseRI GAGGAG 2 cut(s) 654, 819
BseSI GKGCMC 4 cut(s) 78, 1561, 2205, 2640
BseXI GCAGC 3 cut(s) 963, 2046, 2351
Bsh1236I CGCG 1 cut(s) 910
BshFI GGCC 7 cut(s) 130, 174, 306, 450, 870, 1652, 1667
BshNI GGYRCC 2 cut(s) 794, 2635
BshVI ATCGAT 1 cut(s) 2148
BsiHKAI GWGCWC 3 cut(s) 78, 1343, 2205
BsiHKCI CYCGRG 1 cut(s) 681
BsiSI CCGG 4 cut(s) 708, 1299, 1518, 1996
BslFI GGGAC 4 cut(s) 596, 1193, 1511, 1595
BslI CCNNNNNNNGG 5 cut(s) 332, 791, 865, 919, 1535
BsmAI GTCTC 4 cut(s) 1588, 2120, 2276, 2529
BsmBI CGTCTC 1 cut(s) 1588
BsmFI GGGAC 4 cut(s) 596, 1193, 1511, 1595
BsmI GAATGC 2 cut(s) 1264, 1979
BsnI GGCC 7 cut(s) 130, 174, 306, 450, 870, 1652, 1667
Bso31I GGTCTC 1 cut(s) 2276
BsoBI CYCGRG 1 cut(s) 681
Bsp1286I GDGCHC 5 cut(s) 78, 1343, 1561, 2205, 2640
Bsp13I TCCGGA 1 cut(s) 1517
Bsp1407I TGTACA 2 cut(s) 197, 1884
Bsp143I GATC 4 cut(s) 112, 703, 1204, 1396
BspACI CCGC 1 cut(s) 456
BspANI GGCC 7 cut(s) 130, 174, 306, 450, 870, 1652, 1667
BspCNI CTCAG 5 cut(s) 201, 769, 927, 1329, 2130
BspDI ATCGAT 1 cut(s) 2148
BspEI TCCGGA 1 cut(s) 1517
BspFNI CGCG 1 cut(s) 910
BspLI GGNNCC 5 cut(s) 796, 1046, 1181, 1527, 2637
BspMAI CTGCAG 2 cut(s) 553, 2064
BspPI GGATC 1 cut(s) 698
BspT107I GGYRCC 2 cut(s) 794, 2635
BspTI CTTAAG 1 cut(s) 1931
BspTNI GGTCTC 1 cut(s) 2276
BsrDI GCAATG 4 cut(s) 1686, 1914, 2230, 2465
BsrFI RCCGGY 1 cut(s) 1995
BsrGI TGTACA 2 cut(s) 197, 1884
BsrI ACTGG 8 cut(s) 25, 175, 251, 316, 461, 607, 835, 1561
BssAI RCCGGY 1 cut(s) 1995
BssECI CCNNGG 5 cut(s) 357, 879, 1048, 1241, 2196
BssMI GATC 4 cut(s) 112, 703, 1204, 1396
BssNI GRCGYC 1 cut(s) 409
BssSI CACGAG 1 cut(s) 396
BssT1I CCWWGG 3 cut(s) 357, 879, 1241
Bst2BI CACGAG 1 cut(s) 396
Bst2UI CCWGG 3 cut(s) 1049, 2220, 2346
Bst4CI ACNGT 8 cut(s) 1004, 1779, 1789, 1899, 2114, 2197, 2207, 2329
Bst6I CTCTTC 5 cut(s) 493, 550, 679, 2520, 2527
BstACI GRCGYC 1 cut(s) 409
BstAFI CTTAAG 1 cut(s) 1931
BstAPI GCANNNNNTGC 1 cut(s) 2258
BstAUI TGTACA 2 cut(s) 197, 1884
BstC8I GCNNGC 3 cut(s) 176, 1665, 2509
BstDEI CTNAG 8 cut(s) 188, 452, 777, 935, 1136, 1337, 2117, 2521
BstDSI CCRYGG 1 cut(s) 2196
BstENI CCTNNNNNAGG 2 cut(s) 330, 1533
BstF5I GGATG 6 cut(s) 509, 614, 1113, 2509, 2568, 2635
BstFNI CGCG 1 cut(s) 910
BstH2I RGCGCY 1 cut(s) 2345
BstHHI GCGC 2 cut(s) 912, 2344
BstKTI GATC 4 cut(s) 115, 706, 1207, 1399
BstMAI GTCTC 4 cut(s) 1588, 2120, 2276, 2529
BstMBI GATC 4 cut(s) 112, 703, 1204, 1396
BstMWI GCNNNNNNNGC 4 cut(s) 909, 1320, 2258, 2517
BstNI CCWGG 3 cut(s) 1049, 2220, 2346
BstNSI RCATGY 6 cut(s) 611, 1726, 2031, 2071, 2143, 2542
BstPAI GACNNNNGTC 1 cut(s) 2268
BstSCI CCNGG 4 cut(s) 706, 1047, 2218, 2344
BstSFI CTRYAG 2 cut(s) 549, 2060
BstSLI GKGCMC 4 cut(s) 78, 1561, 2205, 2640
BstUI CGCG 1 cut(s) 910
BstV1I GCAGC 3 cut(s) 963, 2046, 2351
BstV2I GAAGAC 2 cut(s) 45, 2247
BstX2I RGATCY 2 cut(s) 703, 1204
BstYI RGATCY 2 cut(s) 703, 1204
Bsu15I ATCGAT 1 cut(s) 2148
BsuI GTATCC 2 cut(s) 1887, 2132
BsuRI GGCC 7 cut(s) 130, 174, 306, 450, 870, 1652, 1667
BsuTUI ATCGAT 1 cut(s) 2148
BtgI CCRYGG 1 cut(s) 2196
BtsCI GGATG 6 cut(s) 509, 614, 1113, 2509, 2568, 2635
BtsIMutI CAGTG 7 cut(s) 168, 309, 468, 1561, 1697, 1794, 2203
Cac8I GCNNGC 3 cut(s) 176, 1665, 2509
CaiI CAGNNNCTG 1 cut(s) 1376
CfoI GCGC 2 cut(s) 912, 2344
Cfr10I RCCGGY 1 cut(s) 1995
Cfr13I GGNCC 4 cut(s) 458, 868, 1180, 1525
ClaI ATCGAT 1 cut(s) 2148
CseI GACGC 3 cut(s) 916, 1642, 2309
Csp6I GTAC 8 cut(s) 63, 198, 315, 1163, 1583, 1885, 2065, 2325
CspCI CAANNNNNGTGG 2 cut(s) 919, 954
CviAII CATG 9 cut(s) 608, 1723, 2028, 2068, 2140, 2180, 2186, 2245, 2539
CviQI GTAC 8 cut(s) 63, 198, 315, 1163, 1583, 1885, 2065, 2325
DdeI CTNAG 8 cut(s) 188, 452, 777, 935, 1136, 1337, 2117, 2521
DpnI GATC 4 cut(s) 114, 705, 1206, 1398
DpnII GATC 4 cut(s) 112, 703, 1204, 1396
DraI TTTAAA 1 cut(s) 789
EaeI YGGCCR 3 cut(s) 172, 1650, 1665
Eam1104I CTCTTC 5 cut(s) 493, 550, 679, 2520, 2527
EarI CTCTTC 5 cut(s) 493, 550, 679, 2520, 2527
Ecl136II GAGCTC 1 cut(s) 1341
Eco130I CCWWGG 3 cut(s) 357, 879, 1241
Eco24I GRGCYC 1 cut(s) 1343
Eco31I GGTCTC 1 cut(s) 2276
Eco32I GATATC 1 cut(s) 1806
Eco47I GGWCC 3 cut(s) 458, 1180, 1525
Eco53kI GAGCTC 1 cut(s) 1341
Eco57I CTGAAG 2 cut(s) 1106, 1537
Eco88I CYCGRG 1 cut(s) 681
EcoICRI GAGCTC 1 cut(s) 1341
EcoNI CCTNNNNNAGG 2 cut(s) 330, 1533
EcoO109I RGGNCCY 2 cut(s) 1180, 1525
EcoRI GAATTC 1 cut(s) 572
EcoRII CCWGG 3 cut(s) 1047, 2218, 2344
EcoRV GATATC 1 cut(s) 1806
EcoT14I CCWWGG 3 cut(s) 357, 879, 1241
EcoT38I GRGCYC 1 cut(s) 1343
ErhI CCWWGG 3 cut(s) 357, 879, 1241
Esp3I CGTCTC 1 cut(s) 1588
FaeI CATG 9 cut(s) 611, 1726, 2031, 2071, 2143, 2183, 2189, 2248, 2542
FaqI GGGAC 4 cut(s) 596, 1193, 1511, 1595
FatI CATG 9 cut(s) 607, 1722, 2027, 2067, 2139, 2179, 2185, 2244, 2538
FbaI TGATCA 1 cut(s) 1396
Fnu4HI GCNGC 3 cut(s) 977, 2060, 2340
FokI GGATG 6 cut(s) 496, 601, 1100, 2516, 2555, 2642
FriOI GRGCYC 1 cut(s) 1343
Fsp4HI GCNGC 3 cut(s) 977, 2060, 2340
FspBI CTAG 6 cut(s) 132, 417, 564, 1202, 2034, 2492
GlaI GCGC 2 cut(s) 911, 2343
GluI GCNGC 3 cut(s) 977, 2060, 2340
GsuI CTGGAG 4 cut(s) 453, 818, 1554, 2460
HaeII RGCGCY 1 cut(s) 2345
HaeIII GGCC 7 cut(s) 130, 174, 306, 450, 870, 1652, 1667
HapII CCGG 4 cut(s) 708, 1299, 1518, 1996
HgaI GACGC 3 cut(s) 916, 1642, 2309
HhaI GCGC 2 cut(s) 912, 2344
Hin1I GRCGYC 1 cut(s) 409
Hin1II CATG 9 cut(s) 611, 1726, 2031, 2071, 2143, 2183, 2189, 2248, 2542
Hin6I GCGC 2 cut(s) 910, 2342
HinP1I GCGC 2 cut(s) 910, 2342
HincII GTYRAC 2 cut(s) 1728, 1782
HindII GTYRAC 2 cut(s) 1728, 1782
HindIII AAGCTT 1 cut(s) 901
HpaI GTTAAC 1 cut(s) 1782
HpaII CCGG 4 cut(s) 708, 1299, 1518, 1996
HphI GGTGA 1 cut(s) 2378
Hpy166II GTNNAC 6 cut(s) 26, 76, 1728, 1782, 1885, 2203
Hpy188I TCNGA 7 cut(s) 514, 778, 936, 1084, 1125, 1338, 2596
Hpy8I GTNNAC 6 cut(s) 26, 76, 1728, 1782, 1885, 2203
Hpy99I CGWCG 1 cut(s) 1028
HpyAV CCTTC 6 cut(s) 42, 549, 1004, 1130, 1539, 2240
HpyCH4III ACNGT 8 cut(s) 1004, 1779, 1789, 1899, 2114, 2197, 2207, 2329
HpyCH4IV ACGT 4 cut(s) 12, 378, 409, 1540
HpyF10VI GCNNNNNNNGC 4 cut(s) 909, 1320, 2258, 2517
HpyF3I CTNAG 8 cut(s) 188, 452, 777, 935, 1136, 1337, 2117, 2521
HpySE526I ACGT 4 cut(s) 12, 378, 409, 1540
Hsp92I GRCGYC 1 cut(s) 409
Hsp92II CATG 9 cut(s) 611, 1726, 2031, 2071, 2143, 2183, 2189, 2248, 2542
HspAI GCGC 2 cut(s) 910, 2342
Kpn2I TCCGGA 1 cut(s) 1517
Ksp22I TGATCA 1 cut(s) 1396
KspAI GTTAAC 1 cut(s) 1782
Kzo9I GATC 4 cut(s) 112, 703, 1204, 1396
LmnI GCTCC 2 cut(s) 645, 1792
Lsp1109I GCAGC 3 cut(s) 963, 2046, 2351
LweI GCATC 5 cut(s) 518, 1700, 1957, 2165, 2494
MaeI CTAG 6 cut(s) 132, 417, 564, 1202, 2034, 2492
MaeII ACGT 4 cut(s) 12, 378, 409, 1540
MaeIII GTNAC 4 cut(s) 335, 1353, 1718, 2446
MalI GATC 4 cut(s) 114, 705, 1206, 1398
MboI GATC 4 cut(s) 112, 703, 1204, 1396
MfeI CAATTG 2 cut(s) 193, 957
MflI RGATCY 2 cut(s) 703, 1204
MhlI GDGCHC 5 cut(s) 78, 1343, 1561, 2205, 2640
MlsI TGGCCA 3 cut(s) 174, 1652, 1667
MluNI TGGCCA 3 cut(s) 174, 1652, 1667
MlyI GAGTC 3 cut(s) 962, 1617, 1618
MmeI TCCRAC 2 cut(s) 1392, 1401
Mox20I TGGCCA 3 cut(s) 174, 1652, 1667
MroI TCCGGA 1 cut(s) 1517
MroXI GAANNNNTTC 5 cut(s) 673, 768, 820, 889, 1306
MscI TGGCCA 3 cut(s) 174, 1652, 1667
MslI CAYNNNNRTG 2 cut(s) 2184, 2208
Msp20I TGGCCA 3 cut(s) 174, 1652, 1667
MspA1I CMGCKG 2 cut(s) 1402, 1772
MspCI CTTAAG 1 cut(s) 1931
MspI CCGG 4 cut(s) 708, 1299, 1518, 1996
MspR9I CCNGG 4 cut(s) 708, 1049, 2220, 2346
MunI CAATTG 2 cut(s) 193, 957
Mva1269I GAATGC 2 cut(s) 1264, 1979
MvaI CCWGG 3 cut(s) 1049, 2220, 2346
MvnI CGCG 1 cut(s) 910
MwoI GCNNNNNNNGC 4 cut(s) 909, 1320, 2258, 2517
NciI CCSGG 1 cut(s) 708
NdeII GATC 4 cut(s) 112, 703, 1204, 1396
NlaIII CATG 9 cut(s) 611, 1726, 2031, 2071, 2143, 2183, 2189, 2248, 2542
NlaIV GGNNCC 5 cut(s) 796, 1046, 1181, 1527, 2637
NmuCI GTSAC 2 cut(s) 1353, 2446
NspI RCATGY 6 cut(s) 611, 1726, 2031, 2071, 2143, 2542
PciI ACATGT 5 cut(s) 607, 1722, 2027, 2067, 2538
PctI GAATGC 2 cut(s) 1264, 1979
PdmI GAANNNNTTC 5 cut(s) 673, 768, 820, 889, 1306
PfeI GAWTC 7 cut(s) 436, 781, 988, 1085, 1702, 2005, 2552
PfoI TCCNGGA 1 cut(s) 706
PkrI GCNGC 3 cut(s) 978, 2061, 2341
PleI GAGTC 3 cut(s) 961, 1616, 1618
PpsI GAGTC 3 cut(s) 961, 1616, 1618
PpuMI RGGWCCY 2 cut(s) 1180, 1525
PscI ACATGT 5 cut(s) 607, 1722, 2027, 2067, 2538
PshAI GACNNNNGTC 1 cut(s) 2268
Psp124BI GAGCTC 1 cut(s) 1343
Psp1406I AACGTT 1 cut(s) 378
Psp5II RGGWCCY 2 cut(s) 1180, 1525
Psp6I CCWGG 3 cut(s) 1047, 2218, 2344
PspGI CCWGG 3 cut(s) 1047, 2218, 2344
PspN4I GGNNCC 5 cut(s) 796, 1046, 1181, 1527, 2637
PspPI GGNCC 4 cut(s) 458, 868, 1180, 1525
PspPPI RGGWCCY 2 cut(s) 1180, 1525
PsrI GAACNNNNNNTAC 6 cut(s) 997, 1029, 1047, 1079, 2308, 2340
PstI CTGCAG 2 cut(s) 553, 2064
PstNI CAGNNNCTG 1 cut(s) 1376
PsuI RGATCY 2 cut(s) 703, 1204
PvuII CAGCTG 2 cut(s) 1402, 1772
RsaI GTAC 8 cut(s) 64, 199, 316, 1164, 1584, 1886, 2066, 2326
RsaNI GTAC 8 cut(s) 63, 198, 315, 1163, 1583, 1885, 2065, 2325
RseI CAYNNNNRTG 2 cut(s) 2184, 2208
SacI GAGCTC 1 cut(s) 1343
SatI GCNGC 3 cut(s) 977, 2060, 2340
Sau3AI GATC 4 cut(s) 112, 703, 1204, 1396
Sau96I GGNCC 4 cut(s) 458, 868, 1180, 1525
ScaI AGTACT 1 cut(s) 1584
SchI GAGTC 3 cut(s) 962, 1617, 1618
ScrFI CCNGG 4 cut(s) 708, 1049, 2220, 2346
SduI GDGCHC 5 cut(s) 78, 1343, 1561, 2205, 2640
SfaNI GCATC 5 cut(s) 518, 1700, 1957, 2165, 2494
SfcI CTRYAG 2 cut(s) 549, 2060
SinI GGWCC 3 cut(s) 458, 1180, 1525
SmiMI CAYNNNNRTG 2 cut(s) 2184, 2208
SmlI CTYRAG 5 cut(s) 1466, 1931, 2084, 2584, 2645
SmoI CTYRAG 5 cut(s) 1466, 1931, 2084, 2584, 2645
SsiI CCGC 1 cut(s) 456
SspI AATATT 1 cut(s) 477
SspMI CTAG 6 cut(s) 132, 417, 564, 1202, 2034, 2492
SstI GAGCTC 1 cut(s) 1343
StyD4I CCNGG 4 cut(s) 706, 1047, 2218, 2344
StyI CCWWGG 3 cut(s) 357, 879, 1241
TaaI ACNGT 8 cut(s) 1004, 1779, 1789, 1899, 2114, 2197, 2207, 2329
TaiI ACGT 4 cut(s) 15, 381, 412, 1543
TaqI TCGA 4 cut(s) 667, 1763, 2148, 2574
TaqII GACCGA 1 cut(s) 2258
TatI WGTACW 5 cut(s) 62, 197, 1582, 1884, 2064
TfiI GAWTC 7 cut(s) 436, 781, 988, 1085, 1702, 2005, 2552
TscAI CASTG 7 cut(s) 175, 316, 468, 1561, 1704, 1794, 2210
TseFI GTSAC 2 cut(s) 1353, 2446
TseI GCWGC 3 cut(s) 976, 2059, 2339
Tsp45I GTSAC 2 cut(s) 1353, 2446
TspDTI ATGAA 6 cut(s) 565, 636, 666, 2253, 2442, 2557
TspGWI ACGGA 1 cut(s) 1811
TspRI CASTG 7 cut(s) 175, 316, 468, 1561, 1704, 1794, 2210
Vha464I CTTAAG 1 cut(s) 1931
VneI GTGCAC 2 cut(s) 74, 2201
VpaK11BI GGWCC 3 cut(s) 458, 1180, 1525
XagI CCTNNNNNAGG 2 cut(s) 330, 1533
XapI RAATTY 8 cut(s) 164, 246, 428, 572, 628, 817, 1478, 2280
XbaI TCTAGA 2 cut(s) 416, 2491
XceI RCATGY 6 cut(s) 611, 1726, 2031, 2071, 2143, 2542
XcmI CCANNNNNNNNNTGG 3 cut(s) 1173, 1660, 2326
XmnI GAANNNNTTC 5 cut(s) 673, 768, 820, 889, 1306
XspI CTAG 6 cut(s) 132, 417, 564, 1202, 2034, 2492
ZraI GACGTC 1 cut(s) 410
ZrmI AGTACT 1 cut(s) 1584
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.