RchiOBHm_Chr5g0011291

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
7477945 .. 7482001
4057 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ29198

Sequence Viewer

Length: 2973 bp
ATGGGAGGTCCAAAGAGCAAATTAGGAGGTACTATACCACATGAGATTGGAGATCTCCCAAATTTAGAGAAATTGAACCTTGGTGTTAATAATCTCAACGGCCTCATCCCATCCTCAGTCTTCAATATATCCACACTAACAGTGATCTCGCTTGGTTCCAATCAACTCTCAGGTAGCCTCCCATTAAACATAGGCCTTGGGCTTCCAAACCTACAAGAGTTGTATCTAGGAGAAAATAAGCTTGGCGGAGTAATTCCCAAATCCATCTCCAATGTTTCGCAGCTCACAATCCTAAGCATGATCTACAACAATTTGAGAGGTACCTGTACTATACCACATGAGATTGGTGATCTCCCAAATTTAGAGAAATTGAATCTTGGTGTTAATAATCTCAACGGCCTCATACCATCGTCAATCTTCAATATGTCCACAATAACAGTGATATCGCTTGTTTCCAATCAACTCTCAGGTAGCCTCCCATTAAACATAGGCCTTGGGCTTCCAAACCTACAAGAGTTGTATCTAGGAGGAAATAAGCTAGGTGGTGTAATTCCCAAATCCATCTCCAATGCTTCGCAGCTCACAATCCTAGATATGGTCAACAACTCATTTTCTAGCTTTATTCCTAGCACGCTTTGTACCTTAACAAAGCTTCAAACACTTAAATTCGGTTTGAATAATTTGACGATCGATTCTTCTACTCAAGAAGTTAATCTGCTATCTTGTTTGGCCAATCTTAGAAATTTGACGAAATTAGGCTTCAATGGAAATCCTTTAAATGCAAGGCTTCCCAATTCCTTTAGGAATCTATCTACATCACTTCAACATATTAAATTAGCTAACTGCAACATGAGAGGTAACATTCCCAATGATATTGGCAACTTGAGCAACTTGATCGTGCTAAACTTGGGAAACAATCAATTGAGTGGACCAATACCAACCTCAATGGGAGGACTACAGAATCTCCAAGGTTTGTATTTGAATGGTAACAAATTGCAAGGACACATCCCGGATGAACTTTGTCAGCTAGAAAACCTAGCTGGATTATTTTTGGGTGGTAATCAACTTACTGGTTCTATACCTTCATGCTTGGGAGATTTAACCAGAGCTCTAAGATATCTATTTTTAAGGTTCAATCTGTTGAATTCCACAATACCATCTACCTTGTGGGGACTCACTGATATCTTGCAGTTGTACTTGTCATCCAATTCCCTAACTGGACGTCTCTCAGATCGTATTGGTAATTTGAAGGTTGTGCAAGCTATAGACTTAACAAACAACCGATTATCCGGTAGTATACCAAGCACCATTGGGGGTCTCCAAGCATTGGCTTCGCTCTCCTTGGCAAATAATGGTTTTGAAGGTCCTATTCCTAGTTCATTTGGTGAATTGCTAAGCCTGGAAATCTGTGATCTATCCAAGAACAATTTGTCAGGAATAATTCCAAAGTCTCTTGAAGCCCTCTTATATCTCCGGTATCTAAATCTCTCTTTCAACAGACTCCAAGGAGAAATTCCAACTGGTGGAACTTTCCTGAACCTCTCTGCCCAATCATTTTTATCCAATGAAGGACTATGTGGTGCACCACGATTTCGTGTCCCGCCATGCAAAAGGAAAAGTGATAGATCTATACTCATGCGGTTGAAATATATTGTTCCAGGGATCATATCAGCACTACTCCTAGTGTCGCTTGTATTAATTTTGATCATACGCAGAAAAAGAAAGGCGGAAGTCGCAAGTGAGACTACCTTGTCACCTCAACTTCAAGAGACTACCTTGTTACCTCAACTTCAGTGGAGAAGAGTAGCATACCAAGAACTTCTAAGAGCGACCAATCGATTTGATGAATGCAACCTACTTGGCATTGGGGCTTTTGGCACAGTGTACAGAGGAACACTTTCAGATGGGATAAATGTTGCCATAAAGGTTTTTAAGCTAGAGTTGGAAAGGGCATTTACAAGTTTTGAGCGTGAATGTGAAGTCCTAAGCAACATTTGTCACCGAAATCTTATCAAAGTCATCAGTTGCTGCAGTCAAATTGATTTCAAGGCCATCGTATTGAATTACATGCCTAATGGGAGCCTCGAGAAGTGGTTGTACTCTCCCAACTTTTCTTTGAACATCCTGCAGAGGTTGAACATAATGATAGATGTTGCATCGGCAGTGCAGTACCTTCATCACGGTTATGATACACCTATTGTCCATTGTGATTTGAAGCCAAGCAACATACTACTAGATGATGATATGGTCGCATATGTTTCTGATTTTGGCATCGCAAAAGTCTTGGGTGGAGAAGATTCCATGACTCAAACCCTGACCTTAGCCACAATTGGGTATATGGCTCCAGAGTATGGACTGGAAGGAATAGTCACCAGAAGAGGGGATGTGTACAGTTTTGGTATTCTGCTTTTGGAAACATTCACAAACAGGAGGCCAACAGATGAGATGTTTGATGGGGAAATGAGTCTAAAGCAATGGGTTGAAAATGCATTATTTGCAGATGCAATAGTTGAAGTTATTGATACCAGTCTACTTGGGATTGAGGAAGATCTTGCTTTTGTTAGCAAGAGGGAGTGTATATCATCCATTATGAGATTAGCTCTTGCTTGTTGTGTAGAATCACCGGAACAGAGGATAAATATGCAAGAGGCTCTAGCTACTTTGGACAAAATCAAGATCAAGTTTTTGATGGATGCCTCAGGAGGTGTGGTGAAGAACCATCATCTAATTGATGTATTGCATAGGAAAATCAGTTTATTCCGGAAAGAGGAAAATTATGATTTTGTGAGCAAGGGAGATTGTTTATCATCCGTTATGAGATTAGCTCTGGCTAGTTGTGCAGAGTCACCGGAACAGAGAACGAGTATGCAAGAAGCTCTAATCGAACTCGATCAAATCAAGATTAAGTTGTTGAAGGACCTTTTCGAAGTACAATGCAGAATGTGTGATAAACTGATAATTGATGGATTCTAG

Protein Analysis

990

Amino Acids

108.38

Weight (kDa)

6.47

Isoelectric Point (pI)

39.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 45 - 105 5.2e-06 Leucine rich repeat
LRR_14 PF23598 135 - 281 4.7e-07 Leucine-rich repeat region
LRR_8 PF13855 168 - 227 7.9e-06 Leucine rich repeat
LRR_14 PF23598 277 - 374 3.8e-06 Leucine-rich repeat region
LRR_8 PF13855 297 - 356 2.8e-06 Leucine rich repeat
LRR_14 PF23598 388 - 501 3.9e-08 Leucine-rich repeat region
LRR_8 PF13855 443 - 501 2.8e-06 Leucine rich repeat
Pkinase PF00069 617 - 886 1.1e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 619 - 885 4.7e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1750
AatII GACGTC 1 cut(s) 1225
Acc65I GGTACC 1 cut(s) 320
AccB1I GGYRCC 1 cut(s) 320
AccB7I CCANNNNNTGG 3 cut(s) 1327, 1523, 2351
AccI GTMKAC 2 cut(s) 1297, 2530
AccIII TCCGGA 1 cut(s) 2760
AciI CCGC 4 cut(s) 246, 1601, 1639, 1727
AclWI GGATC 1 cut(s) 1670
AcoI YGGCCR 1 cut(s) 729
AcsI RAATTY 6 cut(s) 61, 358, 665, 742, 1144, 1512
AcuI CTGAAG 1 cut(s) 1775
AcyI GRCGYC 1 cut(s) 1222
AfiI CCNNNNNNNGG 7 cut(s) 595, 1327, 1523, 2331, 2351, 2379, 2767
AjnI CCWGG 2 cut(s) 1398, 1657
AjuI GAANNNNNNNTTGG 4 cut(s) 225, 257, 1497, 1529
Alw21I GWGCWC 2 cut(s) 1111, 1585
Alw26I GTCTC 5 cut(s) 1229, 1322, 1455, 1736, 1763
Alw44I GTGCAC 1 cut(s) 1581
AlwI GGATC 1 cut(s) 1670
AlwNI CAGNNNCTG 1 cut(s) 2028
Ama87I CYCGRG 1 cut(s) 2084
Aor13HI TCCGGA 1 cut(s) 2760
AoxI GGCC 7 cut(s) 100, 193, 397, 490, 729, 2049, 2432
ApaLI GTGCAC 1 cut(s) 1581
ApeKI GCWGC 3 cut(s) 280, 577, 2028
ApoI RAATTY 6 cut(s) 61, 358, 665, 742, 1144, 1512
AseI ATTAAT 1 cut(s) 1697
Asp700I GAANNNNTTC 1 cut(s) 1897
Asp718I GGTACC 1 cut(s) 320
AspS9I GGNCC 4 cut(s) 8, 929, 1364, 2917
AsuC2I CCSGG 1 cut(s) 1010
AsuHPI GGTGA 8 cut(s) 359, 1397, 1746, 1991, 2362, 2613, 2722, 2838
AsuII TTCGAA 1 cut(s) 2925
AvaI CYCGRG 1 cut(s) 2084
AvaII GGWCC 4 cut(s) 8, 929, 1364, 2917
AxyI CCTNAGG 1 cut(s) 2698
BaeGI GKGCMC 1 cut(s) 1585
BalI TGGCCA 1 cut(s) 731
BanI GGYRCC 1 cut(s) 320
BanII GRGCYC 1 cut(s) 1111
BarI GAAGNNNNNNTAC 2 cut(s) 2081, 2113
BbsI GAAGAC 1 cut(s) 112
Bbv12I GWGCWC 2 cut(s) 1111, 1585
BbvI GCAGC 3 cut(s) 292, 589, 2015
BceAI ACGGC 2 cut(s) 115, 412
BcgI CGANNNNNNTGC 4 cut(s) 877, 911, 1314, 1348
BciT130I CCWGG 2 cut(s) 1400, 1659
BclI TGATCA 1 cut(s) 1704
BcnI CCSGG 1 cut(s) 1010
BcoDI GTCTC 5 cut(s) 1229, 1322, 1455, 1736, 1763
BfmI CTRYAG 4 cut(s) 956, 1263, 2029, 2126
BglII AGATCT 3 cut(s) 52, 1625, 2548
BisI GCNGC 3 cut(s) 281, 578, 2029
BlpI GCTNAGC 1 cut(s) 1394
BlsI GCNGC 3 cut(s) 282, 579, 2030
Bme1390I CCNGG 3 cut(s) 1010, 1400, 1659
Bme18I GGWCC 4 cut(s) 8, 929, 1364, 2917
BmeT110I CYCGRG 1 cut(s) 2084
BmgT120I GGNCC 4 cut(s) 8, 929, 1364, 2917
BmiI GGNNCC 4 cut(s) 157, 322, 2081, 2343
BmrFI CCNGG 3 cut(s) 1010, 1400, 1659
BmsI GCATC 4 cut(s) 2165, 2280, 2491, 2683
BpiI GAAGAC 1 cut(s) 112
BplI GAGNNNNNCTC 4 cut(s) 2584, 2616, 2809, 2841
BpmI CTGGAG 1 cut(s) 2328
Bpu10I CCTNAGC 3 cut(s) 293, 1985, 2320
Bpu1102I GCTNAGC 1 cut(s) 1394
Bpu14I TTCGAA 1 cut(s) 2925
BpuEI CTTGAG 2 cut(s) 687, 904
BpuMI CCSGG 1 cut(s) 1010
Bsa29I ATCGAT 2 cut(s) 690, 1837
BsaHI GRCGYC 1 cut(s) 1222
BsaI GGTCTC 1 cut(s) 1322
BsaJI CCNNGG 7 cut(s) 79, 196, 493, 967, 1341, 1504, 1658
BsaWI WCCGGW 5 cut(s) 1289, 1473, 2623, 2760, 2848
BsaXI ACNNNNNCTCC 4 cut(s) 948, 978, 2694, 2724
Bsc4I CCNNNNNNNGG 7 cut(s) 595, 1327, 1523, 2331, 2351, 2379, 2767
Bse1I ACTGG 5 cut(s) 1075, 1222, 1525, 2361, 2526
Bse21I CCTNAGG 1 cut(s) 2698
Bse3DI GCAATG 1 cut(s) 2480
BseAI TCCGGA 1 cut(s) 2760
BseBI CCWGG 2 cut(s) 1400, 1659
BseCI ATCGAT 2 cut(s) 690, 1837
BseDI CCNNGG 7 cut(s) 79, 196, 493, 967, 1341, 1504, 1658
BseLI CCNNNNNNNGG 7 cut(s) 595, 1327, 1523, 2331, 2351, 2379, 2767
BseMI GCAATG 1 cut(s) 2480
BseMII CTCAG 5 cut(s) 129, 183, 480, 1242, 2712
BseNI ACTGG 5 cut(s) 1075, 1222, 1525, 2361, 2526
BseSI GKGCMC 1 cut(s) 1585
BseXI GCAGC 3 cut(s) 292, 589, 2015
BsgI GTGCAG 2 cut(s) 2186, 2859
Bsh1285I CGRYCG 1 cut(s) 690
BshFI GGCC 7 cut(s) 102, 195, 399, 492, 731, 2051, 2434
BshNI GGYRCC 1 cut(s) 320
BshVI ATCGAT 2 cut(s) 690, 1837
BsiEI CGRYCG 1 cut(s) 690
BsiHKAI GWGCWC 2 cut(s) 1111, 1585
BsiHKCI CYCGRG 1 cut(s) 2084
BsiSI CCGG 6 cut(s) 1010, 1290, 1474, 2624, 2761, 2849
BslFI GGGAC 2 cut(s) 1185, 1583
BslI CCNNNNNNNGG 7 cut(s) 595, 1327, 1523, 2331, 2351, 2379, 2767
BsmAI GTCTC 5 cut(s) 1229, 1322, 1455, 1736, 1763
BsmBI CGTCTC 1 cut(s) 1229
BsmFI GGGAC 2 cut(s) 1185, 1583
BsmI GAATGC 1 cut(s) 1853
BsnI GGCC 7 cut(s) 102, 195, 399, 492, 731, 2051, 2434
Bso31I GGTCTC 1 cut(s) 1322
BsoBI CYCGRG 1 cut(s) 2084
Bsp119I TTCGAA 1 cut(s) 2925
Bsp1286I GDGCHC 2 cut(s) 1111, 1585
Bsp13I TCCGGA 1 cut(s) 2760
Bsp1407I TGTACA 2 cut(s) 1884, 2388
Bsp1720I GCTNAGC 1 cut(s) 1394
BspACI CCGC 4 cut(s) 246, 1601, 1639, 1727
BspANI GGCC 7 cut(s) 102, 195, 399, 492, 731, 2051, 2434
BspCNI CTCAG 5 cut(s) 128, 182, 479, 1241, 2711
BspDI ATCGAT 2 cut(s) 690, 1837
BspEI TCCGGA 1 cut(s) 2760
BspLI GGNNCC 4 cut(s) 157, 322, 2081, 2343
BspMAI CTGCAG 2 cut(s) 2033, 2130
BspPI GGATC 1 cut(s) 1670
BspT104I TTCGAA 1 cut(s) 2925
BspT107I GGYRCC 1 cut(s) 320
BspTNI GGTCTC 1 cut(s) 1322
BsrDI GCAATG 1 cut(s) 2480
BsrGI TGTACA 2 cut(s) 1884, 2388
BsrI ACTGG 5 cut(s) 1075, 1222, 1525, 2361, 2526
BssECI CCNNGG 7 cut(s) 79, 196, 493, 967, 1341, 1504, 1658
BssNAI GTATAC 1 cut(s) 1298
BssNI GRCGYC 1 cut(s) 1222
BssT1I CCWWGG 6 cut(s) 79, 196, 493, 967, 1341, 1504
Bst1107I GTATAC 1 cut(s) 1298
Bst2UI CCWGG 2 cut(s) 1400, 1659
Bst4CI ACNGT 5 cut(s) 142, 439, 1882, 2183, 2393
Bst6I CTCTTC 2 cut(s) 1795, 2371
BstACI GRCGYC 1 cut(s) 1222
BstAPI GCANNNNNTGC 1 cut(s) 2495
BstAUI TGTACA 2 cut(s) 1884, 2388
BstBI TTCGAA 1 cut(s) 2925
BstC8I GCNNGC 2 cut(s) 632, 1260
BstMAI GTCTC 5 cut(s) 1229, 1322, 1455, 1736, 1763
BstMCI CGRYCG 1 cut(s) 690
BstMWI GCNNNNNNNGC 4 cut(s) 885, 1733, 2495, 2837
BstNI CCWGG 2 cut(s) 1400, 1659
BstNSI RCATGY 1 cut(s) 2071
BstSCI CCNGG 3 cut(s) 1008, 1398, 1657
BstSFI CTRYAG 4 cut(s) 956, 1263, 2029, 2126
BstSLI GKGCMC 1 cut(s) 1585
BstV1I GCAGC 3 cut(s) 292, 589, 2015
BstV2I GAAGAC 1 cut(s) 112
BstX2I RGATCY 3 cut(s) 52, 1625, 2548
BstYI RGATCY 3 cut(s) 52, 1625, 2548
BstZ17I GTATAC 1 cut(s) 1298
Bsu15I ATCGAT 2 cut(s) 690, 1837
Bsu36I CCTNAGG 1 cut(s) 2698
BsuRI GGCC 7 cut(s) 102, 195, 399, 492, 731, 2051, 2434
BsuTUI ATCGAT 2 cut(s) 690, 1837
BtgZI GCGATG 1 cut(s) 2257
BtsI GCAGTG 1 cut(s) 2169
BtsIMutI CAGTG 6 cut(s) 147, 444, 1176, 1799, 1887, 2169
Cac8I GCNNGC 2 cut(s) 632, 1260
CaiI CAGNNNCTG 1 cut(s) 2028
Cfr13I GGNCC 4 cut(s) 8, 929, 1364, 2917
ClaI ATCGAT 2 cut(s) 690, 1837
CspCI CAANNNNNGTGG 2 cut(s) 1775, 1810
CviAII CATG 9 cut(s) 41, 298, 338, 850, 1086, 1605, 1636, 2068, 2302
DraI TTTAAA 1 cut(s) 777
DrdI GACNNNNNNGTC 1 cut(s) 1750
DseDI GACNNNNNNGTC 1 cut(s) 1750
EaeI YGGCCR 1 cut(s) 729
Eam1104I CTCTTC 2 cut(s) 1795, 2371
EarI CTCTTC 2 cut(s) 1795, 2371
EciI GGCGGA 2 cut(s) 261, 1742
Ecl136II GAGCTC 1 cut(s) 1109
Eco130I CCWWGG 6 cut(s) 79, 196, 493, 967, 1341, 1504
Eco147I AGGCCT 2 cut(s) 195, 492
Eco24I GRGCYC 1 cut(s) 1111
Eco31I GGTCTC 1 cut(s) 1322
Eco32I GATATC 3 cut(s) 444, 1118, 1183
Eco47I GGWCC 4 cut(s) 8, 929, 1364, 2917
Eco53kI GAGCTC 1 cut(s) 1109
Eco57I CTGAAG 1 cut(s) 1775
Eco81I CCTNAGG 1 cut(s) 2698
Eco88I CYCGRG 1 cut(s) 2084
EcoICRI GAGCTC 1 cut(s) 1109
EcoO109I RGGNCCY 2 cut(s) 1364, 2917
EcoRI GAATTC 1 cut(s) 1144
EcoRII CCWGG 2 cut(s) 1398, 1657
EcoRV GATATC 3 cut(s) 444, 1118, 1183
EcoT14I CCWWGG 6 cut(s) 79, 196, 493, 967, 1341, 1504
EcoT22I ATGCAT 1 cut(s) 2491
EcoT38I GRGCYC 1 cut(s) 1111
ErhI CCWWGG 6 cut(s) 79, 196, 493, 967, 1341, 1504
Esp3I CGTCTC 1 cut(s) 1229
FaeI CATG 9 cut(s) 44, 301, 341, 853, 1089, 1608, 1639, 2071, 2305
FaqI GGGAC 2 cut(s) 1185, 1583
FatI CATG 9 cut(s) 40, 297, 337, 849, 1085, 1604, 1635, 2067, 2301
FauI CCCGC 1 cut(s) 1608
FauNDI CATATG 1 cut(s) 2254
FbaI TGATCA 1 cut(s) 1704
FblI GTMKAC 2 cut(s) 1297, 2530
Fnu4HI GCNGC 3 cut(s) 281, 578, 2029
FriOI GRGCYC 1 cut(s) 1111
Fsp4HI GCNGC 3 cut(s) 281, 578, 2029
GluI GCNGC 3 cut(s) 281, 578, 2029
GsuI CTGGAG 1 cut(s) 2328
HaeIII GGCC 7 cut(s) 102, 195, 399, 492, 731, 2051, 2434
HapII CCGG 6 cut(s) 1010, 1290, 1474, 2624, 2761, 2849
Hin1I GRCGYC 1 cut(s) 1222
Hin1II CATG 9 cut(s) 44, 301, 341, 853, 1089, 1608, 1639, 2071, 2305
HincII GTYRAC 1 cut(s) 601
HindII GTYRAC 1 cut(s) 601
HindIII AAGCTT 2 cut(s) 239, 650
HpaII CCGG 6 cut(s) 1010, 1290, 1474, 2624, 2761, 2849
HphI GGTGA 8 cut(s) 359, 1397, 1746, 1991, 2362, 2613, 2722, 2838
Hpy166II GTNNAC 8 cut(s) 429, 601, 929, 1298, 1583, 1885, 2389, 2531
Hpy188I TCNGA 3 cut(s) 1231, 1903, 2263
Hpy8I GTNNAC 8 cut(s) 429, 601, 929, 1298, 1583, 1885, 2389, 2531
HpyAV CCTTC 7 cut(s) 1092, 1243, 1355, 1562, 2183, 2354, 2908
HpyCH4III ACNGT 5 cut(s) 142, 439, 1882, 2183, 2393
HpyCH4IV ACGT 1 cut(s) 1222
HpyF10VI GCNNNNNNNGC 4 cut(s) 885, 1733, 2495, 2837
HpySE526I ACGT 1 cut(s) 1222
Hsp92I GRCGYC 1 cut(s) 1222
Hsp92II CATG 9 cut(s) 44, 301, 341, 853, 1089, 1608, 1639, 2071, 2305
Kpn2I TCCGGA 1 cut(s) 2760
KpnI GGTACC 1 cut(s) 324
Ksp22I TGATCA 1 cut(s) 1704
LmnI GCTCC 2 cut(s) 2079, 2347
Lsp1109I GCAGC 3 cut(s) 292, 589, 2015
LweI GCATC 4 cut(s) 2165, 2280, 2491, 2683
MaeII ACGT 1 cut(s) 1222
MaeIII GTNAC 7 cut(s) 857, 986, 1752, 1779, 1997, 2368, 2844
MboII GAAGA 8 cut(s) 112, 409, 687, 1812, 2306, 2388, 2558, 2725
MfeI CAATTG 2 cut(s) 920, 2328
MflI RGATCY 3 cut(s) 52, 1625, 2548
MhlI GDGCHC 2 cut(s) 1111, 1585
MlsI TGGCCA 1 cut(s) 731
MluNI TGGCCA 1 cut(s) 731
MlyI GAGTC 5 cut(s) 1167, 1494, 2299, 2473, 2852
MmeI TCCRAC 2 cut(s) 1541, 1923
Mox20I TGGCCA 1 cut(s) 731
Mph1103I ATGCAT 1 cut(s) 2491
MroI TCCGGA 1 cut(s) 2760
MroXI GAANNNNTTC 1 cut(s) 1897
MscI TGGCCA 1 cut(s) 731
MslI CAYNNNNRTG 1 cut(s) 2184
Msp20I TGGCCA 1 cut(s) 731
MspI CCGG 6 cut(s) 1010, 1290, 1474, 2624, 2761, 2849
MspR9I CCNGG 3 cut(s) 1010, 1400, 1659
MunI CAATTG 2 cut(s) 920, 2328
Mva1269I GAATGC 1 cut(s) 1853
MvaI CCWGG 2 cut(s) 1400, 1659
MwoI GCNNNNNNNGC 4 cut(s) 885, 1733, 2495, 2837
NciI CCSGG 1 cut(s) 1010
NdeI CATATG 1 cut(s) 2254
NlaIII CATG 9 cut(s) 44, 301, 341, 853, 1089, 1608, 1639, 2071, 2305
NlaIV GGNNCC 4 cut(s) 157, 322, 2081, 2343
NmuCI GTSAC 4 cut(s) 1752, 1997, 2368, 2844
NsiI ATGCAT 1 cut(s) 2491
NspI RCATGY 1 cut(s) 2071
NspV TTCGAA 1 cut(s) 2925
PaeR7I CTCGAG 1 cut(s) 2084
PceI AGGCCT 2 cut(s) 195, 492
PctI GAATGC 1 cut(s) 1853
PdmI GAANNNNTTC 1 cut(s) 1897
PfeI GAWTC 7 cut(s) 373, 692, 805, 961, 2297, 2618, 2967
PflMI CCANNNNNTGG 3 cut(s) 1327, 1523, 2351
PfoI TCCNGGA 1 cut(s) 1008
PkrI GCNGC 3 cut(s) 282, 579, 2030
Ple19I CGATCG 1 cut(s) 690
PleI GAGTC 5 cut(s) 1167, 1494, 2299, 2472, 2851
PpsI GAGTC 5 cut(s) 1167, 1494, 2299, 2472, 2851
PpuMI RGGWCCY 2 cut(s) 1364, 2917
PshBI ATTAAT 1 cut(s) 1697
Psp124BI GAGCTC 1 cut(s) 1111
Psp5II RGGWCCY 2 cut(s) 1364, 2917
Psp6I CCWGG 2 cut(s) 1398, 1657
PspGI CCWGG 2 cut(s) 1398, 1657
PspN4I GGNNCC 4 cut(s) 157, 322, 2081, 2343
PspPI GGNCC 4 cut(s) 8, 929, 1364, 2917
PspPPI RGGWCCY 2 cut(s) 1364, 2917
PstI CTGCAG 2 cut(s) 2033, 2130
PstNI CAGNNNCTG 1 cut(s) 2028
PsuI RGATCY 3 cut(s) 52, 1625, 2548
PvuI CGATCG 1 cut(s) 690
RseI CAYNNNNRTG 1 cut(s) 2184
SacI GAGCTC 1 cut(s) 1111
SatI GCNGC 3 cut(s) 281, 578, 2029
Sau96I GGNCC 4 cut(s) 8, 929, 1364, 2917
SchI GAGTC 5 cut(s) 1167, 1494, 2299, 2473, 2852
ScrFI CCNGG 3 cut(s) 1010, 1400, 1659
SduI GDGCHC 2 cut(s) 1111, 1585
SfaNI GCATC 4 cut(s) 2165, 2280, 2491, 2683
SfcI CTRYAG 4 cut(s) 956, 1263, 2029, 2126
Sfr274I CTCGAG 1 cut(s) 2084
SfuI TTCGAA 1 cut(s) 2925
SinI GGWCC 4 cut(s) 8, 929, 1364, 2917
SlaI CTCGAG 1 cut(s) 2084
SmiMI CAYNNNNRTG 1 cut(s) 2184
SmlI CTYRAG 3 cut(s) 702, 883, 2084
SmoI CTYRAG 3 cut(s) 702, 883, 2084
SseBI AGGCCT 2 cut(s) 195, 492
SsiI CCGC 4 cut(s) 246, 1601, 1639, 1727
SstI GAGCTC 1 cut(s) 1111
StuI AGGCCT 2 cut(s) 195, 492
StyD4I CCNGG 3 cut(s) 1008, 1398, 1657
StyI CCWWGG 6 cut(s) 79, 196, 493, 967, 1341, 1504
TaaI ACNGT 5 cut(s) 142, 439, 1882, 2183, 2393
TaiI ACGT 1 cut(s) 1225
TaqI TCGA 6 cut(s) 690, 1837, 2085, 2883, 2889, 2925
TatI WGTACW 6 cut(s) 326, 1194, 1884, 2097, 2388, 2929
TfiI GAWTC 7 cut(s) 373, 692, 805, 961, 2297, 2618, 2967
TscAI CASTG 6 cut(s) 147, 444, 1183, 1799, 1887, 2169
TseFI GTSAC 4 cut(s) 1752, 1997, 2368, 2844
TseI GCWGC 3 cut(s) 280, 577, 2028
Tsp45I GTSAC 4 cut(s) 1752, 1997, 2368, 2844
TspDTI ATGAA 6 cut(s) 1029, 1074, 1368, 1581, 1860, 2165
TspGWI ACGGA 1 cut(s) 2800
TspRI CASTG 6 cut(s) 147, 444, 1183, 1799, 1887, 2169
Van91I CCANNNNNTGG 3 cut(s) 1327, 1523, 2351
VneI GTGCAC 1 cut(s) 1581
VpaK11BI GGWCC 4 cut(s) 8, 929, 1364, 2917
VspI ATTAAT 1 cut(s) 1697
XapI RAATTY 6 cut(s) 61, 358, 665, 742, 1144, 1512
XceI RCATGY 1 cut(s) 2071
XcmI CCANNNNNNNNNTGG 1 cut(s) 1164
XhoI CTCGAG 1 cut(s) 2084
XmiI GTMKAC 2 cut(s) 1297, 2530
XmnI GAANNNNTTC 1 cut(s) 1897
ZraI GACGTC 1 cut(s) 1223
Zsp2I ATGCAT 1 cut(s) 2491
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.