Rorug05G0185200

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
17937294 .. 17947886
10593 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0185200.1

Sequence Viewer

Length: 2463 bp
ATGGATGCAAGCAAGGAAGAGTTTCTCAGAGAGTTTGGGGAGCACTATGGATACCCCAACGACCCCAAATCCATCGACGAAATCCGAGCAACCGAGTTTAAGCGATTAGATGGAAATGTGTACTTGGATCATGCTGGGGCTACTTTGTACTCTGAGTTGCAGCTGGAAGCAATCTTTAAGGATTTAAATGTCAATGTGTATGGAAACCCACATAGCCAAAGTGATACCAGTTCTGCCACAAGTGACATTGTAAGGGAAGCCCGCCAACAGGTCCTCGACTACTGTAAAGCATCACCAAAAGAATACAGCTGCATATTCACTTCTGGGGCAACAGCTGCACTGAAGCTTGTAGGGGAGGCCTTTCCTTGGAGCTCTCAGAGCTGTTTTACATACACGACAGAGAATCACAACAGTGTCCTTGGGATTAGAGAATATGCTCTTGGTCAAGGCGCTGCAGCCTCTGCAATAGATATTGAAGAGCATGTGCTTCATGGAGTATCAGGTGGTAGTGTACCATCCATGAGGGTCTTGCAGCACGAAGTACAGAGAAGAAATAAAGCTAGATCTATGGAGGAGGAACCAACAGGTGGTGCATATAACTTATTCGCTTTCCCGTCAGAGTGCAATTTCTCAGGATTACGATTCAGCCTTGACTTGGTGAAGATAATCAAAGAAGATCCCAAAAGAATTATGGAAGGCTCTCCATTTTGCAATGGCCGCTGGATGGTCTTGATTGATGCTGCAAAAGGATTTGCCACAGAACCACCAGATTTATCACTGTATCCGGCAGATTTTGTTGTTATATCTTTCTATAAGCTATTTGGTTATCCAACTGGACTTGGCGCACTCATTGCTCGAAATGATGCTGCTAGAGTACTGAAGAAAACTTACTTCAGTGGAGGCACAGTTGCTGCCTCAATTGCTGACATCGACTTCGTTAAAAGAAGAAAAAGTGTGGAAGAGCTGTTTGAGGATGGCACCATTTCATACCTGAGCATAGCATCTATTCAACATGGGTTCAAAATTCTGAATTCACTGACCGTATCTGCCATATCTCGGCATACAGCATCACTTGCCTTGTATGTAAGGAAGAAGCTCCTGGCTTTGAGGCATGAAAATGGAGCCAAGGTTTGCACACTTTATGGCATGTCAAAGGCATTATGTCGTGGATTTGGTCCAACAGTCTCATTCAACTTGAAAAGGTCGGATGGCACTTGGTATGGATACCGTGAAGTTGAAAAACTGGCATCTTTATCTGGAATTCAGTTACGGACAGGATGCTTTTGCAATCCCGGTGCATGTGCTAAATATCTAGGCTTGTCTCACTCTGAACTTCTTTCAAACATTGAGGCTGGCCATGTTTGCTGGGATGATAATGACATTATTCATGGAAAACCTACAGGAGCTGTGAGAGTATCCTTTGGTTATATGTCAACATTTGAAGATGTTAAGATATTTATTGATTTTGTGACAAGTTCCTTTGTAGCATTATCAAATGGGACTGGAAATGGGTATCAAATAAAGCAAGGTCCTGAAAGCAGATTAGAGGCAGGAAGTTACTCTTTGAAGTCTGTTACTGTCTACCCAATAAAATCATGTGCAGGATTCAATGTGGAAAGTTGGCCTCTGAGCAGTTCTGGTCTGCGTCATGATCGGGAATGGGTTCTTACAAGCCTAAGTGGTGAAATCCTTACACAAAAGAAGGTCCCTGAAATGTGCTTCATAAGTACTTTTATTGACCTCAATAAGGGAATATTGTTTGTCGAGTCACCCCGATGCCAAGTGAGACTGCCCATCAACTTTATGTTAAATTCATGTAATGGTGGGAGAGAAGAGATTAATTTACATGGCCAGAGATATGAAGTACAGGCTTACGAAAAGGAAATCAACATGTGGTTTAGCAATGCCATTGGTCGCCCATGCACCTTATTACGTTGTTTTAGTTCAAATTACAACCTTTGCTTGAATAAGAGCAAAAGTACGGATATGTGCAGAAGGATGGAGGGCATGTTGAATTTTTCTAATGAAGCTCAGTTCTTATTGATATCGGAGGAAAGCGTATCTGACCTCAACGACAGAATAAAAACAAATGTACAAAAGGGTGCTCAAGGAACAGGAGGAGGTCAAATCAGTCCAATGAGATTTCGGCCCAACCTTGTCATATCTGGTGGTGAACCATATGCTGAAGATGGATGGAGAAACCTTAAAATTGGGAATATGTATTTCACATCCTTGGGCGGATGCAACCGTTGTCAGATGATCAACATTGTTCATGAAGCTGGACAAGTGCGGAAGTCAAATGAACCTTTGGCGACTCTAGCATCATATAGGAGAGTCAAGGGAAAGATCTTGTTTGGGATACTGCTGAAATACGAAAAAAGCATTGTAGGGTGGGATGGCGACGACAAAGATGATGATTTGTGGCTTCAAGTAGGACAAGATGTACATCCAAATATAGTTTAG

Protein Analysis

820

Amino Acids

90.96

Weight (kDa)

6.8

Isoelectric Point (pI)

38.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_5 PF00266 40 - 160 2.4e-08 Aminotransferase class-V
Aminotran_5 PF00266 242 - 486 3.5e-19 Aminotransferase class-V
MOSC_N PF03476 521 - 640 8.5e-19 MOSC N-terminal beta barrel domain
MOSC PF03473 671 - 794 2.6e-20 MOSC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 977
AccB7I CCANNNNNTGG 1 cut(s) 587
AccI GTMKAC 1 cut(s) 1581
AciI CCGC 4 cut(s) 262, 718, 2238, 2290
AclWI GGATC 2 cut(s) 135, 671
AcoI YGGCCR 3 cut(s) 715, 1354, 1849
AcsI RAATTY 5 cut(s) 1023, 1030, 1260, 1810, 2014
AcuI CTGAAG 4 cut(s) 362, 877, 899, 2205
AfiI CCNNNNNNNGG 7 cut(s) 268, 366, 587, 655, 724, 1056, 1747
AflIII ACRYGT 1 cut(s) 1890
AjnI CCWGG 1 cut(s) 1098
AjuI GAANNNNNNNTTGG 2 cut(s) 423, 455
AleI CACNNNNGTG 1 cut(s) 411
Alw21I GWGCWC 3 cut(s) 45, 374, 2107
Alw26I GTCTC 3 cut(s) 1189, 1326, 1780
AlwI GGATC 2 cut(s) 135, 671
AlwNI CAGNNNCTG 3 cut(s) 461, 911, 1406
AoxI GGCC 6 cut(s) 357, 715, 1354, 1622, 1849, 2147
ApeKI GCWGC 9 cut(s) 160, 309, 335, 452, 455, 532, 740, 866, 911
ApoI RAATTY 5 cut(s) 1023, 1030, 1260, 1810, 2014
ArsI GACNNNNNNTTYG 2 cut(s) 917, 949
AseI ATTAAT 1 cut(s) 1839
Asp700I GAANNNNTTC 2 cut(s) 21, 1662
AspLEI GCGC 2 cut(s) 452, 845
AspS9I GGNCC 5 cut(s) 271, 1175, 1529, 1705, 2148
AsuC2I CCSGG 1 cut(s) 1293
AsuHPI GGTGA 5 cut(s) 285, 670, 1694, 1761, 2183
AvaII GGWCC 4 cut(s) 271, 1175, 1529, 1705
BalI TGGCCA 2 cut(s) 1356, 1851
BanI GGYRCC 1 cut(s) 977
BanII GRGCYC 1 cut(s) 374
BarI GAAGNNNNNNTAC 2 cut(s) 872, 904
Bbv12I GWGCWC 3 cut(s) 45, 374, 2107
BbvI GCAGC 9 cut(s) 172, 296, 322, 439, 467, 544, 727, 853, 898
BciT130I CCWGG 1 cut(s) 1100
BciVI GTATCC 5 cut(s) 44, 792, 1217, 1426, 2352
BclI TGATCA 1 cut(s) 2259
BcnI CCSGG 1 cut(s) 1293
BcoDI GTCTC 3 cut(s) 1189, 1326, 1780
BfaI CTAG 4 cut(s) 561, 870, 1313, 2318
BfmI CTRYAG 2 cut(s) 453, 1398
BfoI RGCGCY 1 cut(s) 453
BfuI GTATCC 5 cut(s) 44, 792, 1217, 1426, 2352
BglII AGATCT 2 cut(s) 563, 2346
BmcAI AGTACT 2 cut(s) 876, 1729
Bme1390I CCNGG 2 cut(s) 1100, 1293
Bme18I GGWCC 4 cut(s) 271, 1175, 1529, 1705
BmgT120I GGNCC 5 cut(s) 271, 1175, 1529, 1705, 2148
BmiI GGNNCC 4 cut(s) 579, 979, 1123, 1707
BmrFI CCNGG 2 cut(s) 1100, 1293
Bpu10I CCTNAGC 1 cut(s) 992
BpuEI CTTGAG 1 cut(s) 2091
BpuMI CCSGG 1 cut(s) 1293
BsaBI GATNNNNATC 1 cut(s) 2445
BsaJI CCNNGG 4 cut(s) 365, 418, 1125, 2232
BsaXI ACNNNNNCTCC 6 cut(s) 891, 921, 1113, 1143, 1994, 2024
Bsc4I CCNNNNNNNGG 7 cut(s) 268, 366, 587, 655, 724, 1056, 1747
Bse1I ACTGG 4 cut(s) 228, 838, 1248, 1507
Bse3DI GCAATG 3 cut(s) 718, 849, 1909
Bse8I GATNNNNATC 1 cut(s) 2445
BseBI CCWGG 1 cut(s) 1100
BseDI CCNNGG 4 cut(s) 365, 418, 1125, 2232
BseJI GATNNNNATC 1 cut(s) 2445
BseLI CCNNNNNNNGG 7 cut(s) 268, 366, 587, 655, 724, 1056, 1747
BseMI GCAATG 3 cut(s) 718, 849, 1909
BseMII CTCAG 7 cut(s) 40, 144, 389, 645, 983, 1619, 2045
BseNI ACTGG 4 cut(s) 228, 838, 1248, 1507
BseRI GAGGAG 2 cut(s) 587, 2133
BseXI GCAGC 9 cut(s) 172, 296, 322, 439, 467, 544, 727, 853, 898
BseYI CCCAGC 2 cut(s) 134, 1365
BsgI GTGCAG 3 cut(s) 321, 1620, 2011
BshFI GGCC 6 cut(s) 359, 717, 1356, 1624, 1851, 2149
BshNI GGYRCC 1 cut(s) 977
BsiHKAI GWGCWC 3 cut(s) 45, 374, 2107
BsiSI CCGG 2 cut(s) 785, 1293
BslFI GGGAC 2 cut(s) 1513, 1691
BslI CCNNNNNNNGG 7 cut(s) 268, 366, 587, 655, 724, 1056, 1747
BsmAI GTCTC 3 cut(s) 1189, 1326, 1780
BsmFI GGGAC 2 cut(s) 1513, 1691
BsnI GGCC 6 cut(s) 359, 717, 1356, 1624, 1851, 2149
Bsp1286I GDGCHC 3 cut(s) 45, 374, 2107
Bsp1407I TGTACA 2 cut(s) 2092, 2443
Bsp143I GATC 6 cut(s) 127, 563, 676, 1651, 2259, 2346
BspACI CCGC 4 cut(s) 262, 718, 2238, 2290
BspANI GGCC 6 cut(s) 359, 717, 1356, 1624, 1851, 2149
BspCNI CTCAG 7 cut(s) 39, 145, 388, 644, 984, 1620, 2044
BspHI TCATGA 2 cut(s) 1648, 2272
BspLI GGNNCC 4 cut(s) 579, 979, 1123, 1707
BspMAI CTGCAG 1 cut(s) 457
BspPI GGATC 2 cut(s) 135, 671
BspQI GCTCTTC 2 cut(s) 471, 954
BspT107I GGYRCC 1 cut(s) 977
BsrDI GCAATG 3 cut(s) 718, 849, 1909
BsrGI TGTACA 2 cut(s) 2092, 2443
BsrI ACTGG 4 cut(s) 228, 838, 1248, 1507
BssECI CCNNGG 4 cut(s) 365, 418, 1125, 2232
BssMI GATC 6 cut(s) 127, 563, 676, 1651, 2259, 2346
BssT1I CCWWGG 4 cut(s) 365, 418, 1125, 2232
Bst2UI CCWGG 1 cut(s) 1100
Bst4CI ACNGT 9 cut(s) 284, 413, 780, 907, 1042, 1183, 1229, 1579, 2249
Bst6I CTCTTC 4 cut(s) 12, 471, 954, 1827
BstAPI GCANNNNNTGC 4 cut(s) 335, 461, 851, 1073
BstAUI TGTACA 2 cut(s) 2092, 2443
BstC8I GCNNGC 3 cut(s) 10, 262, 1354
BstDEI CTNAG 8 cut(s) 26, 153, 375, 631, 992, 1628, 1676, 2031
BstENI CCTNNNNNAGG 1 cut(s) 1745
BstH2I RGCGCY 1 cut(s) 453
BstHHI GCGC 2 cut(s) 452, 845
BstKTI GATC 6 cut(s) 130, 566, 679, 1654, 2262, 2349
BstMAI GTCTC 3 cut(s) 1189, 1326, 1780
BstMBI GATC 6 cut(s) 127, 563, 676, 1651, 2259, 2346
BstMWI GCNNNNNNNGC 9 cut(s) 335, 378, 461, 717, 851, 920, 1073, 1362, 2318
BstNI CCWGG 1 cut(s) 1100
BstNSI RCATGY 5 cut(s) 485, 1150, 1302, 1894, 2011
BstSCI CCNGG 2 cut(s) 1098, 1291
BstSFI CTRYAG 2 cut(s) 453, 1398
BstV1I GCAGC 9 cut(s) 172, 296, 322, 439, 467, 544, 727, 853, 898
BstX2I RGATCY 3 cut(s) 563, 676, 2346
BstYI RGATCY 3 cut(s) 563, 676, 2346
BsuI GTATCC 5 cut(s) 44, 792, 1217, 1426, 2352
BsuRI GGCC 6 cut(s) 359, 717, 1356, 1624, 1851, 2149
BtsIMutI CAGTG 5 cut(s) 338, 418, 776, 901, 1034
Cac8I GCNNGC 3 cut(s) 10, 262, 1354
CaiI CAGNNNCTG 3 cut(s) 461, 911, 1406
CciI TCATGA 2 cut(s) 1648, 2272
CfoI GCGC 2 cut(s) 452, 845
Cfr13I GGNCC 5 cut(s) 271, 1175, 1529, 1705, 2148
CseI GACGC 1 cut(s) 1634
DdeI CTNAG 8 cut(s) 26, 153, 375, 631, 992, 1628, 1676, 2031
DpnI GATC 6 cut(s) 129, 565, 678, 1653, 2261, 2348
DpnII GATC 6 cut(s) 127, 563, 676, 1651, 2259, 2346
DraI TTTAAA 1 cut(s) 186
EaeI YGGCCR 3 cut(s) 715, 1354, 1849
Eam1104I CTCTTC 4 cut(s) 12, 471, 954, 1827
EarI CTCTTC 4 cut(s) 12, 471, 954, 1827
EciI GGCGGA 1 cut(s) 2253
Ecl136II GAGCTC 1 cut(s) 372
Eco130I CCWWGG 4 cut(s) 365, 418, 1125, 2232
Eco147I AGGCCT 1 cut(s) 359
Eco24I GRGCYC 1 cut(s) 374
Eco32I GATATC 1 cut(s) 2046
Eco47I GGWCC 4 cut(s) 271, 1175, 1529, 1705
Eco53kI GAGCTC 1 cut(s) 372
Eco57I CTGAAG 4 cut(s) 362, 877, 899, 2205
EcoICRI GAGCTC 1 cut(s) 372
EcoNI CCTNNNNNAGG 1 cut(s) 1745
EcoO109I RGGNCCY 3 cut(s) 271, 1529, 1705
EcoRI GAATTC 2 cut(s) 1030, 1260
EcoRII CCWGG 1 cut(s) 1098
EcoRV GATATC 1 cut(s) 2046
EcoT14I CCWWGG 4 cut(s) 365, 418, 1125, 2232
EcoT38I GRGCYC 1 cut(s) 374
ErhI CCWWGG 4 cut(s) 365, 418, 1125, 2232
FalI AAGNNNNNCTT 2 cut(s) 1546, 1578
FaqI GGGAC 2 cut(s) 1513, 1691
FauI CCCGC 1 cut(s) 269
FauNDI CATATG 1 cut(s) 2179
FbaI TGATCA 1 cut(s) 2259
FblI GTMKAC 1 cut(s) 1581
FriOI GRGCYC 1 cut(s) 374
FspBI CTAG 4 cut(s) 561, 870, 1313, 2318
GlaI GCGC 2 cut(s) 451, 844
GsaI CCCAGC 2 cut(s) 138, 1369
HaeII RGCGCY 1 cut(s) 453
HaeIII GGCC 6 cut(s) 359, 717, 1356, 1624, 1851, 2149
HapII CCGG 2 cut(s) 785, 1293
HgaI GACGC 1 cut(s) 1634
HhaI GCGC 2 cut(s) 452, 845
Hin6I GCGC 2 cut(s) 450, 843
HinP1I GCGC 2 cut(s) 450, 843
HincII GTYRAC 1 cut(s) 1434
HindII GTYRAC 1 cut(s) 1434
HindIII AAGCTT 1 cut(s) 344
HinfI GANTC 6 cut(s) 403, 642, 1605, 1766, 2314, 2334
HpaII CCGG 2 cut(s) 785, 1293
HphI GGTGA 5 cut(s) 285, 670, 1694, 1761, 2183
Hpy166II GTNNAC 5 cut(s) 121, 512, 1434, 1582, 2174
Hpy188III TCNNGA 7 cut(s) 633, 730, 1257, 1532, 1649, 1655, 2273
Hpy8I GTNNAC 5 cut(s) 121, 512, 1434, 1582, 2174
Hpy99I CGWCG 2 cut(s) 80, 2405
HpyAV CCTTC 3 cut(s) 689, 1696, 1989
HpyCH4III ACNGT 9 cut(s) 284, 413, 780, 907, 1042, 1183, 1229, 1579, 2249
HpyCH4IV ACGT 1 cut(s) 1933
HpyF10VI GCNNNNNNNGC 9 cut(s) 335, 378, 461, 717, 851, 920, 1073, 1362, 2318
HpyF3I CTNAG 8 cut(s) 26, 153, 375, 631, 992, 1628, 1676, 2031
HpySE526I ACGT 1 cut(s) 1933
HspAI GCGC 2 cut(s) 450, 843
Ksp22I TGATCA 1 cut(s) 2259
Kzo9I GATC 6 cut(s) 127, 563, 676, 1651, 2259, 2346
LguI GCTCTTC 2 cut(s) 471, 954
LmnI GCTCC 5 cut(s) 40, 369, 1101, 1121, 1403
Lsp1109I GCAGC 9 cut(s) 172, 296, 322, 439, 467, 544, 727, 853, 898
MaeI CTAG 4 cut(s) 561, 870, 1313, 2318
MaeII ACGT 1 cut(s) 1933
MaeIII GTNAC 6 cut(s) 242, 1266, 1468, 1556, 1573, 1767
MalI GATC 6 cut(s) 129, 565, 678, 1653, 2261, 2348
MboI GATC 6 cut(s) 127, 563, 676, 1651, 2259, 2346
MfeI CAATTG 1 cut(s) 918
MflI RGATCY 3 cut(s) 563, 676, 2346
MhlI GDGCHC 3 cut(s) 45, 374, 2107
MlsI TGGCCA 2 cut(s) 1356, 1851
MluNI TGGCCA 2 cut(s) 1356, 1851
MlyI GAGTC 3 cut(s) 1775, 2308, 2343
MmeI TCCRAC 3 cut(s) 854, 1185, 1202
Mox20I TGGCCA 2 cut(s) 1356, 1851
MroXI GAANNNNTTC 2 cut(s) 21, 1662
MscI TGGCCA 2 cut(s) 1356, 1851
MseI TTAA 8 cut(s) 99, 177, 185, 939, 1449, 1808, 1839, 2205
MslI CAYNNNNRTG 3 cut(s) 411, 1116, 1774
Msp20I TGGCCA 2 cut(s) 1356, 1851
MspA1I CMGCKG 4 cut(s) 163, 309, 335, 720
MspI CCGG 2 cut(s) 785, 1293
MspR9I CCNGG 2 cut(s) 1100, 1293
MunI CAATTG 1 cut(s) 918
MvaI CCWGG 1 cut(s) 1100
MwoI GCNNNNNNNGC 9 cut(s) 335, 378, 461, 717, 851, 920, 1073, 1362, 2318
NciI CCSGG 1 cut(s) 1293
NdeI CATATG 1 cut(s) 2179
NdeII GATC 6 cut(s) 127, 563, 676, 1651, 2259, 2346
NlaIV GGNNCC 4 cut(s) 579, 979, 1123, 1707
NmeAIII GCCGAG 1 cut(s) 1036
NmuCI GTSAC 3 cut(s) 242, 1468, 1767
NspI RCATGY 5 cut(s) 485, 1150, 1302, 1894, 2011
OliI CACNNNNGTG 1 cut(s) 411
PagI TCATGA 2 cut(s) 1648, 2272
PceI AGGCCT 1 cut(s) 359
PciI ACATGT 1 cut(s) 1890
PciSI GCTCTTC 2 cut(s) 471, 954
PdmI GAANNNNTTC 2 cut(s) 21, 1662
PfeI GAWTC 3 cut(s) 403, 642, 1605
PflMI CCANNNNNTGG 1 cut(s) 587
PleI GAGTC 3 cut(s) 1774, 2308, 2342
PpsI GAGTC 3 cut(s) 1774, 2308, 2342
PpuMI RGGWCCY 3 cut(s) 271, 1529, 1705
PscI ACATGT 1 cut(s) 1890
PshBI ATTAAT 1 cut(s) 1839
Psp124BI GAGCTC 1 cut(s) 374
Psp5II RGGWCCY 3 cut(s) 271, 1529, 1705
Psp6I CCWGG 1 cut(s) 1098
PspFI CCCAGC 2 cut(s) 134, 1365
PspGI CCWGG 1 cut(s) 1098
PspN4I GGNNCC 4 cut(s) 579, 979, 1123, 1707
PspPI GGNCC 5 cut(s) 271, 1175, 1529, 1705, 2148
PspPPI RGGWCCY 3 cut(s) 271, 1529, 1705
PstI CTGCAG 1 cut(s) 457
PstNI CAGNNNCTG 3 cut(s) 461, 911, 1406
PsuI RGATCY 3 cut(s) 563, 676, 2346
PvuII CAGCTG 3 cut(s) 163, 309, 335
RseI CAYNNNNRTG 3 cut(s) 411, 1116, 1774
SacI GAGCTC 1 cut(s) 374
SapI GCTCTTC 2 cut(s) 471, 954
SaqAI TTAA 8 cut(s) 99, 177, 185, 939, 1449, 1808, 1839, 2205
Sau3AI GATC 6 cut(s) 127, 563, 676, 1651, 2259, 2346
Sau96I GGNCC 5 cut(s) 271, 1175, 1529, 1705, 2148
ScaI AGTACT 2 cut(s) 876, 1729
SchI GAGTC 3 cut(s) 1775, 2308, 2343
ScrFI CCNGG 2 cut(s) 1100, 1293
SduI GDGCHC 3 cut(s) 45, 374, 2107
SfcI CTRYAG 2 cut(s) 453, 1398
SinI GGWCC 4 cut(s) 271, 1175, 1529, 1705
SmiI ATTTAAAT 1 cut(s) 186
SmiMI CAYNNNNRTG 3 cut(s) 411, 1116, 1774
SmlI CTYRAG 1 cut(s) 2106
SmoI CTYRAG 1 cut(s) 2106
SseBI AGGCCT 1 cut(s) 359
SsiI CCGC 4 cut(s) 262, 718, 2238, 2290
SspI AATATT 1 cut(s) 1755
SspMI CTAG 4 cut(s) 561, 870, 1313, 2318
SstI GAGCTC 1 cut(s) 374
StuI AGGCCT 1 cut(s) 359
StyD4I CCNGG 2 cut(s) 1098, 1291
StyI CCWWGG 4 cut(s) 365, 418, 1125, 2232
SwaI ATTTAAAT 1 cut(s) 186
TaaI ACNGT 9 cut(s) 284, 413, 780, 907, 1042, 1183, 1229, 1579, 2249
TaiI ACGT 1 cut(s) 1936
TaqI TCGA 5 cut(s) 75, 276, 856, 930, 1764
TatI WGTACW 8 cut(s) 120, 147, 541, 874, 1727, 1864, 2092, 2443
TauI GCSGC 1 cut(s) 720
TfiI GAWTC 3 cut(s) 403, 642, 1605
Tru1I TTAA 8 cut(s) 99, 177, 185, 939, 1449, 1808, 1839, 2205
Tru9I TTAA 8 cut(s) 99, 177, 185, 939, 1449, 1808, 1839, 2205
TscAI CASTG 5 cut(s) 345, 418, 783, 901, 1041
TseFI GTSAC 3 cut(s) 242, 1468, 1767
TseI GCWGC 9 cut(s) 160, 309, 335, 452, 455, 532, 740, 866, 911
Tsp45I GTSAC 3 cut(s) 242, 1468, 1767
TspGWI ACGGA 2 cut(s) 1285, 1997
TspRI CASTG 5 cut(s) 345, 418, 783, 901, 1041
Van91I CCANNNNNTGG 1 cut(s) 587
VpaK11BI GGWCC 4 cut(s) 271, 1175, 1529, 1705
VspI ATTAAT 1 cut(s) 1839
XagI CCTNNNNNAGG 1 cut(s) 1745
XapI RAATTY 5 cut(s) 1023, 1030, 1260, 1810, 2014
XceI RCATGY 5 cut(s) 485, 1150, 1302, 1894, 2011
XcmI CCANNNNNNNNNTGG 1 cut(s) 688
XmiI GTMKAC 1 cut(s) 1581
XmnI GAANNNNTTC 2 cut(s) 21, 1662
XspI CTAG 4 cut(s) 561, 870, 1313, 2318
ZrmI AGTACT 2 cut(s) 876, 1729
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.