Rroxscaffold_5G00347810

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Forward (+)
19450841 .. 19453697
2857 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00347810.1

Sequence Viewer

Length: 2448 bp
ATGGGAAACCCACGAATGCTAATCCCATTTGGACTAGTAGTGTTACTTCACTACTCATTCTTCCTTCACCCGGCCACCACCTCCTCCTCCAACTTCACCGACCAATCTGCTCTCCTTGCCATTCAATCCAAACTCACATTTGATCCTCCCAAAACTGTCTTGGGTGGTAATTGGGGTACCAACACAAGCTTCTGTGATTGGATTGGGGTCTCATGCAGTAAACGGAGGCAGAGAGTCACGGCCTTGCACTTGTCATCTATGGGTCTTGAAGGCACCATTGCACCTCATGTTGGCAACCTCTCCTTTCTGGTCATATTGGTTCTTCAAAACAACAGCTTCTCTGGGATTGTGCCAAATGAAATCAGCCATTTACACCGCTTGAGGGTACTTGTACTGGAAGCGAACCGGTTGGAAGGGCACATCCCTCCAACTTTACATCATTGCCAAAAGCTCGAAATCATTGCCCTTGCAGAAAACAAGCTTACCGGTCGTATACCTGAAGAGTTGGGTTTCTTACCCAAACTTCAGAAATTATATCTCGGTTTAAACAATCTCACGGCTGGTGAAATTCCAGCATCTTTGGGGAACGTTTCAACATTACGAGAATTGAGTGCGGCAAAAAGTGGCCTCACAGGAGTTCTTCCTGAGGATCTTTGCCATTACTGGCCTAATATTCAACACATTGCTTTACATGAAAACAAGCTTGGCGGCCAGCTCTCTTCGAGATTTAATCAATGCAGTAACATTGAGGTGTTATCTCTGTCATACAATAGGTTTGTCGGAACTATTCCAAAAGACCTTGCAAGTTTACAGCATCTTGAATTGCTCTACCTCGGTGGTAATGGCTTAACCGGTACTGTACCGCCGGTCCTAGGTAACTTGTCGAACTTGCAAAAGTTTTCTGTAGGACGTAATAACATCAAAGGAAGTATTCCCACAGAGTTGGGCCTTCTTTCTAATTTACTTTACCTTTCATTAGCTATGAATAGCCTAACAGGTGCAATACCTCCAGAAATTTTCAACATCACCTCCTTACAAACTTTGTCAGTACGTAATAATTCCCTTTCTGGGGCAATTCCTTCATATTCTGGAGTAGTTTTTCCTAACCTCGAATTCATATACTTTCAAAACAATAAGATTACTGGACTTATCCCACCCTTTTTTTCAAACCTTACTAAGCTGAATGACTTAGGACTCAGTACCAATTTACTCTATGGACCAATTCCCATGAATCTTGGTAGCCTAAAACACCTCCAGTACCTTGATTTGGCAAGAAATCAGTTGACTGGAGAACCTGGAGTTCCTGAACTTAAATTCCTTTCCTCATTATTCAATTCCACTTCGCTGCGAGAGTTGGTTCTGACTGAAAATCCTCTAAATGGCATCATACCCAATTCCTTTGGAAATTTTTCTTCCCTTCAGCACATTTCAGCAATTTCGTGCCAGATAAAGGGTCACATTCCCACAAAAATTCATTCCTTGAAAAGTTTAATCTACCTTAAATTTGTGGACAACAATATAAGTGGAAAAATACCACCACAGATTGGAGGACTGCAGAGTGGAGACATACCTACCACCTTGACAAAGTCGATTTCCATTGAAGTGATTGATGTATCTCATAACCAAATTACTGGTAATATTTCAAGCATCATAGCAGCATTCCAAAGCCTAGCTTACCTTGATTTGTCAAAGAACTGGTTTATAGGATCCATCCCACCGAGCTGTGGTGATCTGAAAGGGTTAGAGTATCTGGACCTATCATACAATAACCTGTCTGGTGCAATACCAAAGTCTCTTGAAACTCTCAAATTTCTCGAGTATTTGAATCTCTCTTTCAATGATCTCTTTGGAGAGATTCCTTCTGGTGGACCTTTTGTAAACTTTAGTTCCCGATCATTTTTGGAGAATAAAGCACTTTGTGGGAGACCAAAGTATGGAGTTCCACCTTGTATAACTCAAAAATCAAATACGACACATCCTGTGCTCACATATGTTCTTCCTAGCGTTGCATCGACAGTGATTCTGATAGCCCTCATTTATATGATCACATGGTATAGAAAAAGAAAGAAAGGCAAGAGTACAACAGTTGAACAGCTAACAACAGTGGAGCATAATAGGATATCATATCAAGAACTCCGTCGCGCTACAAATGACTTTTGTGAAAGCAACTTTGTTGGAGGGGGAAGTTTTGGCTCGGTGTACAAGGGCATACTGTCTAATGGGACTACTATTGCTGTCAAAATTCTTCAGCTGGAAATGGAGGGTGCTGTAAAAAGTTTTGATGCAGAATGCAAGGTGTGGCGAACAATCCGTCATAGGAATCTTGTAAAGATTATAACTACATGTTCTAGCCCTGAGTATTCTGCAAAGAGTGAGCATGCTGATCGATATTGCATCTGCTTTGGAATATCTCCATCATGGTCAAACAGAAGCTGTGGTGCACTGTGA

Protein Analysis

815

Amino Acids

89.2

Weight (kDa)

8.94

Isoelectric Point (pI)

39.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 88 - 209 2.4e-07 Leucine-rich repeat region
LRR_8 PF13855 223 - 283 6.8e-06 Leucine rich repeat
LRR_14 PF23598 243 - 353 4.7e-07 Leucine-rich repeat region
LRR_14 PF23598 314 - 424 2.5e-06 Leucine-rich repeat region
LRR_8 PF13855 556 - 615 5.7e-10 Leucine rich repeat
Pkinase PF00069 723 - 786 1.5e-06 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 725 - 784 1e-06 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2336
Acc65I GGTACC 1 cut(s) 176
AccB1I GGYRCC 2 cut(s) 176, 272
AccB7I CCANNNNNTGG 2 cut(s) 1544, 1934
AccI GTMKAC 1 cut(s) 493
AccII CGCG 1 cut(s) 2142
AciI CCGC 4 cut(s) 376, 614, 708, 863
AclI AACGTT 1 cut(s) 588
AclWI GGATC 4 cut(s) 137, 657, 1701, 1714
AcoI YGGCCR 2 cut(s) 72, 709
AcsI RAATTY 9 cut(s) 567, 1014, 1112, 1313, 1405, 1470, 1502, 1808, 2241
AcuI CTGAAG 4 cut(s) 509, 519, 1403, 2231
AdeI CACNNNGTG 1 cut(s) 1919
AflIII ACRYGT 1 cut(s) 2342
AgeI ACCGGT 3 cut(s) 405, 485, 851
AhlI ACTAGT 1 cut(s) 34
AjnI CCWGG 1 cut(s) 1294
AjuI GAANNNNNNNTTGG 4 cut(s) 173, 205, 687, 719
AloI GAACNNNNNNTCC 2 cut(s) 1299, 1331
Alw21I GWGCWC 2 cut(s) 1986, 2443
Alw26I GTCTC 4 cut(s) 214, 1557, 1797, 1918
Alw44I GTGCAC 1 cut(s) 2439
AlwI GGATC 4 cut(s) 137, 657, 1701, 1714
AlwNI CAGNNNCTG 1 cut(s) 2433
Ama87I CYCGRG 1 cut(s) 1814
AoxI GGCC 6 cut(s) 72, 240, 625, 665, 709, 946
ApaLI GTGCAC 1 cut(s) 2439
ApeKI GCWGC 2 cut(s) 1345, 1655
ApoI RAATTY 9 cut(s) 567, 1014, 1112, 1313, 1405, 1470, 1502, 1808, 2241
ArsI GACNNNNNNTTYG 2 cut(s) 2296, 2328
AsiGI ACCGGT 3 cut(s) 405, 485, 851
Asp700I GAANNNNTTC 1 cut(s) 1408
Asp718I GGTACC 1 cut(s) 176
AspA2I CCTAGG 1 cut(s) 871
AspLEI GCGC 1 cut(s) 2144
AspS9I GGNCC 5 cut(s) 868, 946, 1217, 1753, 1868
AsuC2I CCSGG 1 cut(s) 71
AsuHPI GGTGA 5 cut(s) 59, 88, 575, 1018, 1739
AvaI CYCGRG 1 cut(s) 1814
AvaII GGWCC 4 cut(s) 868, 1217, 1753, 1868
AvrII CCTAGG 1 cut(s) 871
AxyI CCTNAGG 1 cut(s) 645
BaeGI GKGCMC 2 cut(s) 420, 2443
BamHI GGATCC 1 cut(s) 1706
BanI GGYRCC 2 cut(s) 176, 272
BarI GAAGNNNNNNTAC 2 cut(s) 30, 62
Bbv12I GWGCWC 2 cut(s) 1986, 2443
BbvI GCAGC 2 cut(s) 1332, 1667
BccI CCATC 2 cut(s) 1718, 2422
BceAI ACGGC 2 cut(s) 255, 573
BcgI CGANNNNNNTGC 6 cut(s) 89, 123, 443, 477, 2366, 2400
BciT130I CCWGG 1 cut(s) 1296
BclI TGATCA 1 cut(s) 2043
BcnI CCSGG 1 cut(s) 71
BcoDI GTCTC 4 cut(s) 214, 1557, 1797, 1918
BcuI ACTAGT 1 cut(s) 34
BfaI CTAG 5 cut(s) 35, 872, 1670, 2001, 2349
BfmI CTRYAG 2 cut(s) 903, 1553
BisI GCNGC 4 cut(s) 615, 709, 1346, 1656
BlnI CCTAGG 1 cut(s) 871
BlsI GCNGC 4 cut(s) 616, 710, 1347, 1657
Bme1390I CCNGG 2 cut(s) 71, 1296
Bme18I GGWCC 4 cut(s) 868, 1217, 1753, 1868
BmeT110I CYCGRG 1 cut(s) 1814
BmgT120I GGNCC 5 cut(s) 868, 946, 1217, 1753, 1868
BmiI GGNNCC 3 cut(s) 178, 274, 1708
BmrFI CCNGG 2 cut(s) 71, 1296
BmsI GCATC 7 cut(s) 584, 823, 1392, 1656, 2018, 2272, 2403
BpmI CTGGAG 5 cut(s) 993, 1110, 1238, 1308, 1317
BpuEI CTTGAG 1 cut(s) 400
BpuMI CCSGG 1 cut(s) 71
Bsa29I ATCGAT 1 cut(s) 2386
BsaAI YACGTR 1 cut(s) 1052
BsaI GGTCTC 2 cut(s) 214, 1918
BsaJI CCNNGG 2 cut(s) 832, 871
BsaWI WCCGGW 3 cut(s) 405, 485, 851
BsaXI ACNNNNNCTCC 2 cut(s) 1013, 1043
Bse118I RCCGGY 4 cut(s) 405, 485, 851, 865
Bse1I ACTGG 7 cut(s) 399, 668, 1147, 1255, 1291, 1636, 1700
Bse21I CCTNAGG 1 cut(s) 645
Bse3DI GCAATG 4 cut(s) 276, 439, 459, 681
BseBI CCWGG 1 cut(s) 1296
BseCI ATCGAT 1 cut(s) 2386
BseDI CCNNGG 2 cut(s) 832, 871
BseGI GGATG 3 cut(s) 420, 1710, 1975
BseMI GCAATG 4 cut(s) 276, 439, 459, 681
BseMII CTCAG 3 cut(s) 636, 1210, 2346
BseNI ACTGG 7 cut(s) 399, 668, 1147, 1255, 1291, 1636, 1700
BseRI GAGGAG 2 cut(s) 73, 76
BseSI GKGCMC 2 cut(s) 420, 2443
BseXI GCAGC 2 cut(s) 1332, 1667
Bsh1236I CGCG 1 cut(s) 2142
Bsh1285I CGRYCG 1 cut(s) 490
BshFI GGCC 6 cut(s) 74, 242, 627, 667, 711, 948
BshNI GGYRCC 2 cut(s) 176, 272
BshTI ACCGGT 3 cut(s) 405, 485, 851
BshVI ATCGAT 1 cut(s) 2386
BsiEI CGRYCG 1 cut(s) 490
BsiHKAI GWGCWC 2 cut(s) 1986, 2443
BsiHKCI CYCGRG 1 cut(s) 1814
BsiSI CCGG 5 cut(s) 71, 406, 486, 852, 866
BslFI GGGAC 1 cut(s) 2236
BsmAI GTCTC 4 cut(s) 214, 1557, 1797, 1918
BsmFI GGGAC 1 cut(s) 2236
BsmI GAATGC 3 cut(s) 21, 1658, 2294
BsnI GGCC 6 cut(s) 74, 242, 627, 667, 711, 948
Bso31I GGTCTC 2 cut(s) 214, 1918
BsoBI CYCGRG 1 cut(s) 1814
Bsp1286I GDGCHC 3 cut(s) 420, 1986, 2443
Bsp1407I TGTACA 1 cut(s) 2199
Bsp143I GATC 8 cut(s) 142, 649, 1706, 1729, 1840, 1892, 2043, 2383
BspACI CCGC 4 cut(s) 376, 614, 708, 863
BspANI GGCC 6 cut(s) 74, 242, 627, 667, 711, 948
BspCNI CTCAG 3 cut(s) 637, 1209, 2347
BspDI ATCGAT 1 cut(s) 2386
BspFNI CGCG 1 cut(s) 2142
BspLI GGNNCC 3 cut(s) 178, 274, 1708
BspMAI CTGCAG 1 cut(s) 1557
BspPI GGATC 4 cut(s) 137, 657, 1701, 1714
BspT107I GGYRCC 2 cut(s) 176, 272
BspTNI GGTCTC 2 cut(s) 214, 1918
BsrDI GCAATG 4 cut(s) 276, 439, 459, 681
BsrFI RCCGGY 4 cut(s) 405, 485, 851, 865
BsrGI TGTACA 1 cut(s) 2199
BsrI ACTGG 7 cut(s) 399, 668, 1147, 1255, 1291, 1636, 1700
BssAI RCCGGY 4 cut(s) 405, 485, 851, 865
BssECI CCNNGG 2 cut(s) 832, 871
BssMI GATC 8 cut(s) 142, 649, 1706, 1729, 1840, 1892, 2043, 2383
BssNAI GTATAC 1 cut(s) 494
BssT1I CCWWGG 1 cut(s) 871
Bst1107I GTATAC 1 cut(s) 494
Bst2UI CCWGG 1 cut(s) 1296
Bst4CI ACNGT 7 cut(s) 157, 859, 2017, 2086, 2104, 2214, 2445
Bst6I CTCTTC 2 cut(s) 495, 724
BstAUI TGTACA 1 cut(s) 2199
BstBAI YACGTR 1 cut(s) 1052
BstC8I GCNNGC 2 cut(s) 713, 2379
BstDEI CTNAG 5 cut(s) 645, 1176, 1189, 1196, 2355
BstF5I GGATG 3 cut(s) 420, 1710, 1975
BstFNI CGCG 1 cut(s) 2142
BstHHI GCGC 1 cut(s) 2144
BstKTI GATC 8 cut(s) 145, 652, 1709, 1732, 1843, 1895, 2046, 2386
BstMAI GTCTC 4 cut(s) 214, 1557, 1797, 1918
BstMBI GATC 8 cut(s) 142, 649, 1706, 1729, 1840, 1892, 2043, 2383
BstMCI CGRYCG 1 cut(s) 490
BstMWI GCNNNNNNNGC 1 cut(s) 116
BstNI CCWGG 1 cut(s) 1296
BstNSI RCATGY 2 cut(s) 2346, 2381
BstSCI CCNGG 2 cut(s) 69, 1294
BstSFI CTRYAG 2 cut(s) 903, 1553
BstSLI GKGCMC 2 cut(s) 420, 2443
BstSNI TACGTA 1 cut(s) 1052
BstUI CGCG 1 cut(s) 2142
BstV1I GCAGC 2 cut(s) 1332, 1667
BstX2I RGATCY 2 cut(s) 649, 1706
BstXI CCANNNNNNTGG 2 cut(s) 943, 1631
BstYI RGATCY 2 cut(s) 649, 1706
BstZ17I GTATAC 1 cut(s) 494
Bsu15I ATCGAT 1 cut(s) 2386
Bsu36I CCTNAGG 1 cut(s) 645
BsuRI GGCC 6 cut(s) 74, 242, 627, 667, 711, 948
BsuTUI ATCGAT 1 cut(s) 2386
BtsCI GGATG 3 cut(s) 420, 1710, 1975
BtsIMutI CAGTG 3 cut(s) 2022, 2109, 2441
Cac8I GCNNGC 2 cut(s) 713, 2379
CaiI CAGNNNCTG 1 cut(s) 2433
CfoI GCGC 1 cut(s) 2144
Cfr10I RCCGGY 4 cut(s) 405, 485, 851, 865
Cfr13I GGNCC 5 cut(s) 868, 946, 1217, 1753, 1868
ClaI ATCGAT 1 cut(s) 2386
CspAI ACCGGT 3 cut(s) 405, 485, 851
CspCI CAANNNNNGTGG 2 cut(s) 1504, 1539
CviAII CATG 8 cut(s) 213, 287, 692, 1228, 2049, 2343, 2378, 2418
DdeI CTNAG 5 cut(s) 645, 1176, 1189, 1196, 2355
DpnI GATC 8 cut(s) 144, 651, 1708, 1731, 1842, 1894, 2045, 2385
DpnII GATC 8 cut(s) 142, 649, 1706, 1729, 1840, 1892, 2043, 2383
DraI TTTAAA 1 cut(s) 546
DraIII CACNNNGTG 1 cut(s) 1919
EaeI YGGCCR 2 cut(s) 72, 709
Eam1104I CTCTTC 2 cut(s) 495, 724
EarI CTCTTC 2 cut(s) 495, 724
Eco105I TACGTA 1 cut(s) 1052
Eco130I CCWWGG 1 cut(s) 871
Eco31I GGTCTC 2 cut(s) 214, 1918
Eco32I GATATC 1 cut(s) 2121
Eco47I GGWCC 4 cut(s) 868, 1217, 1753, 1868
Eco57I CTGAAG 4 cut(s) 509, 519, 1403, 2231
Eco81I CCTNAGG 1 cut(s) 645
Eco88I CYCGRG 1 cut(s) 1814
EcoRI GAATTC 1 cut(s) 1112
EcoRII CCWGG 1 cut(s) 1294
EcoRV GATATC 1 cut(s) 2121
EcoT14I CCWWGG 1 cut(s) 871
ErhI CCWWGG 1 cut(s) 871
FaeI CATG 8 cut(s) 216, 290, 695, 1231, 2052, 2346, 2381, 2421
FalI AAGNNNNNCTT 2 cut(s) 1657, 1689
FaqI GGGAC 1 cut(s) 2236
FatI CATG 8 cut(s) 212, 286, 691, 1227, 2048, 2342, 2377, 2417
FauNDI CATATG 1 cut(s) 1990
FbaI TGATCA 1 cut(s) 2043
FblI GTMKAC 1 cut(s) 493
Fnu4HI GCNGC 4 cut(s) 615, 709, 1346, 1656
FokI GGATG 3 cut(s) 407, 1697, 1962
Fsp4HI GCNGC 4 cut(s) 615, 709, 1346, 1656
FspBI CTAG 5 cut(s) 35, 872, 1670, 2001, 2349
GlaI GCGC 1 cut(s) 2143
GluI GCNGC 4 cut(s) 615, 709, 1346, 1656
GsuI CTGGAG 5 cut(s) 993, 1110, 1238, 1308, 1317
HaeIII GGCC 6 cut(s) 74, 242, 627, 667, 711, 948
HapII CCGG 5 cut(s) 71, 406, 486, 852, 866
HhaI GCGC 1 cut(s) 2144
Hin1II CATG 8 cut(s) 216, 290, 695, 1231, 2052, 2346, 2381, 2421
Hin6I GCGC 1 cut(s) 2142
HinP1I GCGC 1 cut(s) 2142
HincII GTYRAC 1 cut(s) 1284
HindII GTYRAC 1 cut(s) 1284
HindIII AAGCTT 3 cut(s) 187, 479, 701
HinfI GANTC 7 cut(s) 234, 1194, 1231, 1825, 1855, 2020, 2320
HpaII CCGG 5 cut(s) 71, 406, 486, 852, 866
HphI GGTGA 5 cut(s) 59, 88, 575, 1018, 1739
Hpy166II GTNNAC 9 cut(s) 221, 494, 809, 1284, 1510, 1868, 1879, 2200, 2441
Hpy188I TCNGA 5 cut(s) 528, 782, 1362, 1734, 2025
Hpy8I GTNNAC 9 cut(s) 221, 494, 809, 1284, 1510, 1868, 1879, 2200, 2441
Hpy99I CGWCG 1 cut(s) 2142
HpyAV CCTTC 7 cut(s) 74, 263, 407, 959, 1089, 1427, 1869
HpyCH4III ACNGT 7 cut(s) 157, 859, 2017, 2086, 2104, 2214, 2445
HpyCH4IV ACGT 3 cut(s) 588, 910, 1051
HpyF10VI GCNNNNNNNGC 1 cut(s) 116
HpyF3I CTNAG 5 cut(s) 645, 1176, 1189, 1196, 2355
HpySE526I ACGT 3 cut(s) 588, 910, 1051
Hsp92II CATG 8 cut(s) 216, 290, 695, 1231, 2052, 2346, 2381, 2421
HspAI GCGC 1 cut(s) 2142
KpnI GGTACC 1 cut(s) 180
Ksp22I TGATCA 1 cut(s) 2043
Kzo9I GATC 8 cut(s) 142, 649, 1706, 1729, 1840, 1892, 2043, 2383
LmnI GCTCC 1 cut(s) 2107
Lsp1109I GCAGC 2 cut(s) 1332, 1667
LweI GCATC 7 cut(s) 584, 823, 1392, 1656, 2018, 2272, 2403
MaeI CTAG 5 cut(s) 35, 872, 1670, 2001, 2349
MaeII ACGT 3 cut(s) 588, 910, 1051
MaeIII GTNAC 5 cut(s) 42, 235, 740, 875, 1454
MalI GATC 8 cut(s) 144, 651, 1708, 1731, 1842, 1894, 2045, 2385
MboI GATC 8 cut(s) 142, 649, 1706, 1729, 1840, 1892, 2043, 2383
MboII GAAGA 8 cut(s) 52, 314, 512, 632, 711, 1404, 1988, 2237
MflI RGATCY 2 cut(s) 649, 1706
MhlI GDGCHC 3 cut(s) 420, 1986, 2443
MlyI GAGTC 2 cut(s) 243, 1188
MmeI TCCRAC 5 cut(s) 114, 390, 452, 760, 2155
MroXI GAANNNNTTC 1 cut(s) 1408
MseI TTAA 6 cut(s) 545, 729, 848, 1311, 1490, 1500
MslI CAYNNNNRTG 3 cut(s) 749, 1601, 2039
MspA1I CMGCKG 1 cut(s) 2251
MspI CCGG 5 cut(s) 71, 406, 486, 852, 866
MspR9I CCNGG 2 cut(s) 71, 1296
MssI GTTTAAAC 1 cut(s) 546
Mva1269I GAATGC 3 cut(s) 21, 1658, 2294
MvaI CCWGG 1 cut(s) 1296
MvnI CGCG 1 cut(s) 2142
MwoI GCNNNNNNNGC 1 cut(s) 116
NciI CCSGG 1 cut(s) 71
NdeI CATATG 1 cut(s) 1990
NdeII GATC 8 cut(s) 142, 649, 1706, 1729, 1840, 1892, 2043, 2383
NlaIII CATG 8 cut(s) 216, 290, 695, 1231, 2052, 2346, 2381, 2421
NlaIV GGNNCC 3 cut(s) 178, 274, 1708
NmuCI GTSAC 2 cut(s) 235, 1454
NspI RCATGY 2 cut(s) 2346, 2381
PaeI GCATGC 1 cut(s) 2381
PaeR7I CTCGAG 1 cut(s) 1814
PciI ACATGT 1 cut(s) 2342
PctI GAATGC 3 cut(s) 21, 1658, 2294
PdmI GAANNNNTTC 1 cut(s) 1408
PfeI GAWTC 5 cut(s) 1231, 1825, 1855, 2020, 2320
PflFI GACNNNGTC 1 cut(s) 1585
PflMI CCANNNNNTGG 2 cut(s) 1544, 1934
PinAI ACCGGT 3 cut(s) 405, 485, 851
PkrI GCNGC 4 cut(s) 616, 710, 1347, 1657
PleI GAGTC 2 cut(s) 242, 1188
PmeI GTTTAAAC 1 cut(s) 546
PpsI GAGTC 2 cut(s) 242, 1188
Ppu21I YACGTR 1 cut(s) 1052
PscI ACATGT 1 cut(s) 2342
PsiI TTATAA 1 cut(s) 2336
Psp1406I AACGTT 1 cut(s) 588
Psp6I CCWGG 1 cut(s) 1294
PspGI CCWGG 1 cut(s) 1294
PspN4I GGNNCC 3 cut(s) 178, 274, 1708
PspPI GGNCC 5 cut(s) 868, 946, 1217, 1753, 1868
PstI CTGCAG 1 cut(s) 1557
PstNI CAGNNNCTG 1 cut(s) 2433
PsuI RGATCY 2 cut(s) 649, 1706
PsyI GACNNNGTC 1 cut(s) 1585
PvuII CAGCTG 1 cut(s) 2251
RseI CAYNNNNRTG 3 cut(s) 749, 1601, 2039
SaqAI TTAA 6 cut(s) 545, 729, 848, 1311, 1490, 1500
SatI GCNGC 4 cut(s) 615, 709, 1346, 1656
Sau3AI GATC 8 cut(s) 142, 649, 1706, 1729, 1840, 1892, 2043, 2383
Sau96I GGNCC 5 cut(s) 868, 946, 1217, 1753, 1868
SchI GAGTC 2 cut(s) 243, 1188
ScrFI CCNGG 2 cut(s) 71, 1296
SduI GDGCHC 3 cut(s) 420, 1986, 2443
SfaNI GCATC 7 cut(s) 584, 823, 1392, 1656, 2018, 2272, 2403
SfcI CTRYAG 2 cut(s) 903, 1553
Sfr274I CTCGAG 1 cut(s) 1814
SinI GGWCC 4 cut(s) 868, 1217, 1753, 1868
SlaI CTCGAG 1 cut(s) 1814
SmiMI CAYNNNNRTG 3 cut(s) 749, 1601, 2039
SmlI CTYRAG 2 cut(s) 379, 1814
SmoI CTYRAG 2 cut(s) 379, 1814
SnaBI TACGTA 1 cut(s) 1052
SpeI ACTAGT 1 cut(s) 34
SphI GCATGC 1 cut(s) 2381
SsiI CCGC 4 cut(s) 376, 614, 708, 863
SspI AATATT 2 cut(s) 673, 1639
SspMI CTAG 5 cut(s) 35, 872, 1670, 2001, 2349
StyD4I CCNGG 2 cut(s) 69, 1294
StyI CCWWGG 1 cut(s) 871
TaaI ACNGT 7 cut(s) 157, 859, 2017, 2086, 2104, 2214, 2445
TaiI ACGT 3 cut(s) 591, 913, 1054
TaqI TCGA 8 cut(s) 453, 722, 884, 1110, 1589, 1815, 2012, 2386
TatI WGTACW 3 cut(s) 391, 2078, 2199
TauI GCSGC 2 cut(s) 617, 711
TfiI GAWTC 5 cut(s) 1231, 1825, 1855, 2020, 2320
Tru1I TTAA 6 cut(s) 545, 729, 848, 1311, 1490, 1500
Tru9I TTAA 6 cut(s) 545, 729, 848, 1311, 1490, 1500
TscAI CASTG 3 cut(s) 2022, 2109, 2448
TseFI GTSAC 2 cut(s) 235, 1454
TseI GCWGC 2 cut(s) 1345, 1655
Tsp45I GTSAC 2 cut(s) 235, 1454
TspDTI ATGAA 8 cut(s) 372, 708, 963, 998, 1071, 1105, 1244, 1463
TspGWI ACGGA 3 cut(s) 238, 2126, 2300
TspRI CASTG 3 cut(s) 2022, 2109, 2448
Tth111I GACNNNGTC 1 cut(s) 1585
Van91I CCANNNNNTGG 2 cut(s) 1544, 1934
VneI GTGCAC 1 cut(s) 2439
VpaK11BI GGWCC 4 cut(s) 868, 1217, 1753, 1868
XapI RAATTY 9 cut(s) 567, 1014, 1112, 1313, 1405, 1470, 1502, 1808, 2241
XceI RCATGY 2 cut(s) 2346, 2381
XcmI CCANNNNNNNNNTGG 1 cut(s) 157
XhoI CTCGAG 1 cut(s) 1814
XmaJI CCTAGG 1 cut(s) 871
XmiI GTMKAC 1 cut(s) 493
XmnI GAANNNNTTC 1 cut(s) 1408
XspI CTAG 5 cut(s) 35, 872, 1670, 2001, 2349
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.