RchiOBHm_Chr5g0011171

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000058
Physical Location & Seq
Forward (+)
7405139 .. 7409110
3972 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ29186

Sequence Viewer

Length: 3318 bp
ATGGAGAGAACTAATACCCGTTTTTTTCTGGTATACTACTACTGGTGCATGGCTAGCTTAACCATAGCAGCACAAGTTATCGACGGTACTCTCACCGCAGACCAATCTGCTCTTCTTGCTCTCAAAGCCCATATCACTAGCGACCCTCATAACATGATCTTGACCAACTGGTCAACCACCACCCCCATTTGCAATTGGGCTGGCGTTACTTGTGGTGTACGCCATCTTAGAGCCGCAGCCTTGAACCTCTCTTACTCTGGTCTTGTGGGCACTATTCCTCCGCAGCTAGGCAACCTGTCATTTCTTGTTCATCTCGACTTGAGAAATAACAGCTTTCATGGTCATTTGCCCGAGGAATTGGCTCATCTGCGCCGGTTGAAGTTCATCGACTTGGGAAACAACAAATTTATGGGAGCCATTCCGTCGTGGTTCGGGTCTTTATCCAAACTTCAAAGCTTCACTTTGAGAGGTAATCAGTTTTCGGGTTCAATACCCTCTGCAATTTTCAACTTGTCTGCACTGCAAGTCGTTGATATGAATTATAACCAGCTAGCAGGCAGTATACCGAGAGAAATTGGAAACTCAACAATGCTCAAGAAGATACTCTTAGATTTTAATAACTTAGAAGAAATTCCAAACGAGATCGGCGCTTTAGATCAACTGGAAAAACTTTATGTGCAAGAAAATTCCCTAGAAGGACATCTTCCTATGGTTATCTTCAACATGTCTTCATTGATTACTCTGACTCTATATGGGAACAACTTGAAGGGTAGACTTCCTGACAATATATGTCAGAATCTTCCTCATATTCAATCGTTGGCCTTCTCTCACAACCAGTTTAATGGTCCACTTCCATCCAAATTTTGGCAGTGCAAACAACTTGTATCTTTACTATTGTCGGGTAACAACTTCAGTGGAAGCATACCCAAAACTATTGGGAACGTAACTCAGTTGAAGGAGATAAATCTTGGCTACAATTACTTGACAGGTACTATACCACATGAGATAGGTGATCTTCCAAATTTAGAGATATTGGCAGTCCATGTTAATAATCTGAATGGCTTCATCCCAACCACAATCTTCAACATGTCCACAGCAAGTTTAATATCACTTGGTGTTAATCAGCTTTCAGGCAGCCTTCCACCAGATTTAGGTCTTCAGCTTCCAAACCTACAAGAGCTTTATGTAGGTAGCAATTTGCTCACCGGCGTATTCCCAAAATCCATCTCCAATGCTTCTAACCTCACTACCCTAGAGTTGGCCGGGAACTCATTTTTCGGCTATATTCCTAGAACTCTCTGCGGCTTACAAGACCTTCAGTTGCTTAACTTAGAGGGCAACAAATTAACCATTGATACTTCCACTCCAGAAGCAAACGCTTTTCCCTGTCTGACCAACCTTAGAAATTTGAATGAATTATACTTGGACTTTAACCCATTAAACACCACCTTTGCCCTTTACCGTGGAAATCTCTCTGCATCACTTCAATATATTTATTTAAGCAATTGCAACATTAGTGGTAACATTCCCAATGATATTGGAAACATGAGCAGCTTAGTACTGTTGGACTTGGGATACAATCAATTCAGTGGATCAATTCCAATTACAATTGGAAGGCTACAGAATCTCCAAGGTCTGTACTTGAATGATAACAAACTGCTAGGACACATCCCACATCAGCTTTGTCATTTAGAAAACCTAGCTGAATTACTTTTGGGTGGTAACCAACTCTCTGGTTCTTTACCTTCTTGCTTGGGTAATCTGGCGGCACTAAGAAGTCTATCAATAAAGTCCAATTTGTTGAATTCAACAATTCCATCTACCTTGTGGGGACTGAAAGATATCTTGCATTTAGACCTTTCATCTAATTCTCTAGTTGGACCTCTCTCCGAAGGTGTTCAAAAATTGAAAGCTGTGATAGACTTGGATTTTTCAGACAACAGTTTATCAGGTATTATACCAAGCAGCATTGAGGGTCTGCAAAACTTGGTCAATCTCTCCTTGGCAGATAATATGTTAGAAGGCTCTATTCCTGGTTCATTTGGAAAATTAGTGAGCCTAGAGCTCTTGGATCTATCCAGAAACAATCTATCTGGAGTCATTCCGAAGTCTTTAGAAGCACTATTACATCTCAAGTATCTAAATTTGTCTTTCAACAGACTCCAAGGAGAAATTCCAACAGGCGGACCTTTCAGAAACTTCTCTGCTCAATCATTTGTCTCAAGTGGCGAACTCTGTGGTGCACCCCGACTACTTGTTACAACGTGCAAGAGTAAACCAAGTAGATCCATCTTGAAATATATTATACCAGGGATCTTGTCAGCAATATTCATAGTTACCTCCATTTGGATAGTGATACTACGTAGAAGAAAGATTGTGGAAGCTGCAAAAGAGACTACATTGTTACCTCAACTTCTATATAGAAGAGTTTCGCACCTCGAACTTGTTAGAGCAACAAATGCATTTAAAGAAAGCAACTTACTAGGCCGTGGTGGTTTTGGCTCGGTATATAAAGGAACATTTTCTGATGGGATAGACGTTGCCATAAAGGTTTTCAATTTACAGTTAGAAGGGGCGTTTAAGAGCTTCGATATTGAGTGTGAAATGCTAGCCAATATTCGTCATCGAAATCTTATCAAAATCATCAGTTGCTGTAGTCAAATTGATTTCAAAGCTGTGGTACTGAACTACTTGCCTAATGGGAGCCTTGAGAAGTGCTTGTATTCTGCAAACTTTTGTTTGAACATCTTGCAGAGATTGAGTATTATGATAGATGTTGCATCGGCATTAGAATATCTTCATCATGGCTATGAAACACCTATTGTTCACTGTGATTTGAAGCCCAGCAATATCCTACTGGATGAGGATATGAGTGCACATGTTGCTGACTTTGGCATTGCAAAACTTTTGTGTGGAAGAGATTCGATGACCCAAACCATCACTCAAGCCACAATTGGATATATGGCTCCAGAGTATGGAATGGAAGGAATAGTTACTAGAAGAGGGGATGTGTACAGTTTTGGTATCGTATTGATGGAAACAGTCACAGGAAAGAAGCCAACGGATGAGATGTTTATTGGGGAAATGAGTTTGAAGCAATGGGTTGCAAATTCACCAGTACTTGATGTTGTGGATGCCGACTTACTTGGGACAAAAGCAGAGGATCGTGATTTTGAAAACAAGAGCGAGTGTCTGTCATCCATTATGAGAGTAGCTCTAGCTTGTTCCACAGAATCACCGGAACAGAGGATTAATATGCAAGAGGCTCTAACCACGCTGAACAAAATCAAGATCAAGTTTTTGAAGGACGAGATGTAG

Protein Analysis

1105

Amino Acids

121.34

Weight (kDa)

6.11

Isoelectric Point (pI)

33.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 33 - 71 8.7e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 75 - 182 6.7e-08 Leucine-rich repeat region
LRR_14 PF23598 172 - 250 2.4e-06 Leucine-rich repeat region
LRR_14 PF23598 257 - 470 7.4e-13 Leucine-rich repeat region
LRR_8 PF13855 389 - 449 1.6e-10 Leucine rich repeat
LRR_14 PF23598 494 - 603 1.4e-09 Leucine-rich repeat region
LRR_14 PF23598 617 - 721 3.4e-06 Leucine-rich repeat region
LRR_8 PF13855 662 - 721 1.9e-08 Leucine rich repeat
Pkinase PF00069 823 - 1091 3.2e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 825 - 1091 2.5e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 543
AasI GACNNNNNNGTC 1 cut(s) 169
AccB7I CCANNNNNTGG 2 cut(s) 864, 2975
AccI GTMKAC 3 cut(s) 33, 562, 772
AciI CCGC 6 cut(s) 96, 234, 281, 1302, 1766, 2184
AclWI GGATC 5 cut(s) 1600, 2079, 2280, 2321, 3171
AcoI YGGCCR 1 cut(s) 1260
AcuI CTGAAG 3 cut(s) 895, 1142, 1301
AdeI CACNNNGTG 1 cut(s) 1115
AfaI GTAC 8 cut(s) 88, 219, 991, 1560, 1640, 2682, 3014, 3120
AfiI CCNNNNNNNGG 7 cut(s) 287, 864, 1151, 1258, 2183, 2346, 2975
AflIII ACRYGT 3 cut(s) 723, 1086, 2878
AjnI CCWGG 2 cut(s) 2032, 2308
AjuI GAANNNNNNNTTGG 4 cut(s) 96, 128, 2157, 2189
Alw21I GWGCWC 3 cut(s) 2067, 2245, 2878
Alw26I GTCTC 2 cut(s) 2224, 2387
Alw44I GTGCAC 2 cut(s) 2241, 2874
AlwI GGATC 5 cut(s) 1600, 2079, 2280, 2321, 3171
AlwNI CAGNNNCTG 1 cut(s) 2652
Ama87I CYCGRG 1 cut(s) 350
AoxI GGCC 3 cut(s) 819, 1260, 2485
ApaLI GTGCAC 2 cut(s) 2241, 2874
ApeKI GCWGC 7 cut(s) 68, 236, 283, 1134, 1551, 1965, 2384
AseI ATTAAT 1 cut(s) 3252
Asp700I GAANNNNTTC 7 cut(s) 630, 1061, 1896, 2428, 2521, 2796, 2920
AspLEI GCGC 2 cut(s) 372, 650
AspS9I GGNCC 3 cut(s) 845, 1880, 2186
AsuC2I CCSGG 1 cut(s) 1264
AsuHPI GGTGA 5 cut(s) 85, 1022, 1195, 3105, 3228
AsuNHI GCTAGC 3 cut(s) 53, 550, 2608
AvaI CYCGRG 1 cut(s) 350
AvaII GGWCC 3 cut(s) 845, 1880, 2186
BaeGI GKGCMC 3 cut(s) 272, 2245, 2878
BanII GRGCYC 1 cut(s) 2067
BarI GAAGNNNNNNTAC 2 cut(s) 2109, 2141
BbsI GAAGAC 2 cut(s) 720, 1148
Bbv12I GWGCWC 3 cut(s) 2067, 2245, 2878
BbvI GCAGC 7 cut(s) 80, 248, 295, 1146, 1563, 1977, 2371
BccI CCATC 8 cut(s) 231, 862, 1232, 1825, 2297, 2522, 2945, 3028
BceAI ACGGC 1 cut(s) 2472
BciT130I CCWGG 2 cut(s) 2034, 2310
BciVI GTATCC 1 cut(s) 1568
BcnI CCSGG 1 cut(s) 1264
BcoDI GTCTC 2 cut(s) 2224, 2387
BfmI CTRYAG 2 cut(s) 1619, 2653
BfoI RGCGCY 1 cut(s) 651
BfuI GTATCC 1 cut(s) 1568
BmcAI AGTACT 2 cut(s) 1560, 3120
Bme1390I CCNGG 3 cut(s) 1264, 2034, 2310
Bme18I GGWCC 3 cut(s) 845, 1880, 2186
BmeT110I CYCGRG 1 cut(s) 350
BmgT120I GGNCC 3 cut(s) 845, 1880, 2186
BmiI GGNNCC 3 cut(s) 415, 2705, 2967
BmrFI CCNGG 3 cut(s) 1264, 2034, 2310
BmsI GCATC 3 cut(s) 1487, 2789, 3124
BmtI GCTAGC 3 cut(s) 57, 554, 2612
BpiI GAAGAC 2 cut(s) 720, 1148
BplI GAGNNNNNCTC 2 cut(s) 3199, 3231
BpmI CTGGAG 3 cut(s) 1350, 2115, 2952
BpuEI CTTGAG 6 cut(s) 340, 578, 2117, 2206, 2729, 2928
BpuMI CCSGG 1 cut(s) 1264
BsaAI YACGTR 1 cut(s) 2363
BsaJI CCNNGG 7 cut(s) 351, 1462, 1630, 2001, 2164, 2309, 2488
BsaWI WCCGGW 1 cut(s) 3238
BsaXI ACNNNNNCTCC 6 cut(s) 262, 292, 1348, 1378, 1611, 1641
Bsc4I CCNNNNNNNGG 7 cut(s) 287, 864, 1151, 1258, 2183, 2346, 2975
Bse118I RCCGGY 2 cut(s) 372, 1205
Bse1I ACTGG 6 cut(s) 47, 173, 666, 835, 2862, 3116
Bse3DI GCAATG 2 cut(s) 2895, 3104
BseBI CCWGG 2 cut(s) 2034, 2310
BseDI CCNNGG 7 cut(s) 351, 1462, 1630, 2001, 2164, 2309, 2488
BseGI GGATG 8 cut(s) 854, 1065, 1668, 2866, 3013, 3070, 3139, 3197
BseLI CCNNNNNNNGG 7 cut(s) 287, 864, 1151, 1258, 2183, 2346, 2975
BseMI GCAATG 2 cut(s) 2895, 3104
BseMII CTCAG 1 cut(s) 962
BseNI ACTGG 6 cut(s) 47, 173, 666, 835, 2862, 3116
BseSI GKGCMC 3 cut(s) 272, 2245, 2878
BseXI GCAGC 7 cut(s) 80, 248, 295, 1146, 1563, 1977, 2371
BseYI CCCAGC 1 cut(s) 2843
BsgI GTGCAG 1 cut(s) 501
BshFI GGCC 3 cut(s) 821, 1262, 2487
BsiHKAI GWGCWC 3 cut(s) 2067, 2245, 2878
BsiHKCI CYCGRG 1 cut(s) 350
BsiSI CCGG 4 cut(s) 373, 1206, 1263, 3239
BslFI GGGAC 2 cut(s) 1845, 3163
BslI CCNNNNNNNGG 7 cut(s) 287, 864, 1151, 1258, 2183, 2346, 2975
BsmAI GTCTC 2 cut(s) 2224, 2387
BsmFI GGGAC 2 cut(s) 1845, 3163
BsnI GGCC 3 cut(s) 821, 1262, 2487
BsoBI CYCGRG 1 cut(s) 350
Bsp1286I GDGCHC 4 cut(s) 272, 2067, 2245, 2878
Bsp1407I TGTACA 1 cut(s) 3012
BspACI CCGC 6 cut(s) 96, 234, 281, 1302, 1766, 2184
BspANI GGCC 3 cut(s) 821, 1262, 2487
BspCNI CTCAG 1 cut(s) 961
BspLI GGNNCC 3 cut(s) 415, 2705, 2967
BspOI GCTAGC 3 cut(s) 57, 554, 2612
BspPI GGATC 5 cut(s) 1600, 2079, 2280, 2321, 3171
BspQI GCTCTTC 1 cut(s) 117
BsrDI GCAATG 2 cut(s) 2895, 3104
BsrFI RCCGGY 2 cut(s) 372, 1205
BsrGI TGTACA 1 cut(s) 3012
BsrI ACTGG 6 cut(s) 47, 173, 666, 835, 2862, 3116
BssAI RCCGGY 2 cut(s) 372, 1205
BssECI CCNNGG 7 cut(s) 351, 1462, 1630, 2001, 2164, 2309, 2488
BssNAI GTATAC 2 cut(s) 34, 563
BssT1I CCWWGG 3 cut(s) 1630, 2001, 2164
Bst1107I GTATAC 2 cut(s) 34, 563
Bst2UI CCWGG 2 cut(s) 2034, 2310
Bst4CI ACNGT 8 cut(s) 86, 1463, 1563, 1943, 2565, 2831, 3017, 3043
Bst6I CTCTTC 4 cut(s) 117, 2419, 2911, 2995
BstAPI GCANNNNNTGC 2 cut(s) 2459, 2882
BstAUI TGTACA 1 cut(s) 3012
BstBAI YACGTR 1 cut(s) 2363
BstC8I GCNNGC 5 cut(s) 55, 202, 552, 556, 2610
BstDEI CTNAG 8 cut(s) 227, 607, 622, 948, 1330, 1400, 1555, 1772
BstDSI CCRYGG 2 cut(s) 1462, 2488
BstEII GGTNACC 1 cut(s) 1721
BstF5I GGATG 8 cut(s) 854, 1065, 1668, 2866, 3013, 3070, 3139, 3197
BstH2I RGCGCY 1 cut(s) 651
BstHHI GCGC 2 cut(s) 372, 650
BstMAI GTCTC 2 cut(s) 2224, 2387
BstMWI GCNNNNNNNGC 5 cut(s) 54, 116, 125, 2459, 2882
BstNI CCWGG 2 cut(s) 2034, 2310
BstNSI RCATGY 3 cut(s) 727, 1090, 2882
BstPI GGTNACC 1 cut(s) 1721
BstSCI CCNGG 3 cut(s) 1262, 2032, 2308
BstSFI CTRYAG 2 cut(s) 1619, 2653
BstSLI GKGCMC 3 cut(s) 272, 2245, 2878
BstSNI TACGTA 1 cut(s) 2363
BstV1I GCAGC 7 cut(s) 80, 248, 295, 1146, 1563, 1977, 2371
BstV2I GAAGAC 2 cut(s) 720, 1148
BstX2I RGATCY 3 cut(s) 2071, 2285, 2313
BstXI CCANNNNNNTGG 2 cut(s) 842, 1733
BstYI RGATCY 3 cut(s) 2071, 2285, 2313
BstZ17I GTATAC 2 cut(s) 34, 563
BsuI GTATCC 1 cut(s) 1568
BsuRI GGCC 3 cut(s) 821, 1262, 2487
BtgI CCRYGG 2 cut(s) 1462, 2488
BtsCI GGATG 8 cut(s) 854, 1065, 1668, 2866, 3013, 3070, 3139, 3197
BtsI GCAGTG 2 cut(s) 518, 875
BtsIMutI CAGTG 5 cut(s) 518, 875, 919, 1594, 2827
Cac8I GCNNGC 5 cut(s) 55, 202, 552, 556, 2610
CaiI CAGNNNCTG 1 cut(s) 2652
CfoI GCGC 2 cut(s) 372, 650
Cfr10I RCCGGY 2 cut(s) 372, 1205
Cfr13I GGNCC 3 cut(s) 845, 1880, 2186
Csp6I GTAC 8 cut(s) 87, 218, 990, 1559, 1639, 2681, 3013, 3119
CspCI CAANNNNNGTGG 4 cut(s) 895, 930, 1498, 1533
CviQI GTAC 8 cut(s) 87, 218, 990, 1559, 1639, 2681, 3013, 3119
DdeI CTNAG 8 cut(s) 227, 607, 622, 948, 1330, 1400, 1555, 1772
DraI TTTAAA 1 cut(s) 2467
DraIII CACNNNGTG 1 cut(s) 1115
DrdI GACNNNNNNGTC 1 cut(s) 169
DseDI GACNNNNNNGTC 1 cut(s) 169
EaeI YGGCCR 1 cut(s) 1260
Eam1104I CTCTTC 4 cut(s) 117, 2419, 2911, 2995
EarI CTCTTC 4 cut(s) 117, 2419, 2911, 2995
EciI GGCGGA 1 cut(s) 2199
Ecl136II GAGCTC 1 cut(s) 2065
Eco105I TACGTA 1 cut(s) 2363
Eco130I CCWWGG 3 cut(s) 1630, 2001, 2164
Eco24I GRGCYC 1 cut(s) 2067
Eco32I GATATC 1 cut(s) 1843
Eco47I GGWCC 3 cut(s) 845, 1880, 2186
Eco53kI GAGCTC 1 cut(s) 2065
Eco57I CTGAAG 3 cut(s) 895, 1142, 1301
Eco88I CYCGRG 1 cut(s) 350
Eco91I GGTNACC 1 cut(s) 1721
EcoICRI GAGCTC 1 cut(s) 2065
EcoO65I GGTNACC 1 cut(s) 1721
EcoRI GAATTC 1 cut(s) 1804
EcoRII CCWGG 2 cut(s) 2032, 2308
EcoRV GATATC 1 cut(s) 1843
EcoT14I CCWWGG 3 cut(s) 1630, 2001, 2164
EcoT22I ATGCAT 1 cut(s) 2464
EcoT38I GRGCYC 1 cut(s) 2067
ErhI CCWWGG 3 cut(s) 1630, 2001, 2164
FalI AAGNNNNNCTT 6 cut(s) 445, 477, 590, 622, 687, 719
FaqI GGGAC 2 cut(s) 1845, 3163
FblI GTMKAC 3 cut(s) 33, 562, 772
FokI GGATG 8 cut(s) 841, 1052, 1655, 2873, 3020, 3077, 3146, 3184
FriOI GRGCYC 1 cut(s) 2067
GlaI GCGC 2 cut(s) 371, 649
GsaI CCCAGC 1 cut(s) 2847
GsuI CTGGAG 3 cut(s) 1350, 2115, 2952
HaeII RGCGCY 1 cut(s) 651
HaeIII GGCC 3 cut(s) 821, 1262, 2487
HapII CCGG 4 cut(s) 373, 1206, 1263, 3239
HhaI GCGC 2 cut(s) 372, 650
Hin6I GCGC 2 cut(s) 370, 648
HinP1I GCGC 2 cut(s) 370, 648
HincII GTYRAC 1 cut(s) 174
HindII GTYRAC 1 cut(s) 174
HindIII AAGCTT 1 cut(s) 454
HinfI GANTC 7 cut(s) 745, 796, 1624, 2097, 2160, 2921, 3233
HpaII CCGG 4 cut(s) 373, 1206, 1263, 3239
HphI GGTGA 5 cut(s) 85, 1022, 1195, 3105, 3228
Hpy188I TCNGA 9 cut(s) 744, 795, 1056, 1392, 1891, 1936, 2106, 2195, 2527
Hpy99I CGWCG 2 cut(s) 86, 427
HpyCH4III ACNGT 8 cut(s) 86, 1463, 1563, 1943, 2565, 2831, 3017, 3043
HpyCH4IV ACGT 4 cut(s) 942, 2264, 2362, 2538
HpyF10VI GCNNNNNNNGC 5 cut(s) 54, 116, 125, 2459, 2882
HpyF3I CTNAG 8 cut(s) 227, 607, 622, 948, 1330, 1400, 1555, 1772
HpySE526I ACGT 4 cut(s) 942, 2264, 2362, 2538
HspAI GCGC 2 cut(s) 370, 648
LguI GCTCTTC 1 cut(s) 117
LmnI GCTCC 3 cut(s) 413, 2703, 2971
Lsp1109I GCAGC 7 cut(s) 80, 248, 295, 1146, 1563, 1977, 2371
LweI GCATC 3 cut(s) 1487, 2789, 3124
MaeII ACGT 4 cut(s) 942, 2264, 2362, 2538
MfeI CAATTG 4 cut(s) 193, 1504, 1608, 2952
MflI RGATCY 3 cut(s) 2071, 2285, 2313
MhlI GDGCHC 4 cut(s) 272, 2067, 2245, 2878
MlyI GAGTC 3 cut(s) 739, 2106, 2154
MmeI TCCRAC 3 cut(s) 1545, 1858, 2201
Mph1103I ATGCAT 1 cut(s) 2464
MroXI GAANNNNTTC 7 cut(s) 630, 1061, 1896, 2428, 2521, 2796, 2920
MslI CAYNNNNRTG 1 cut(s) 2808
MspI CCGG 4 cut(s) 373, 1206, 1263, 3239
MspR9I CCNGG 3 cut(s) 1264, 2034, 2310
MunI CAATTG 4 cut(s) 193, 1504, 1608, 2952
MvaI CCWGG 2 cut(s) 2034, 2310
MwoI GCNNNNNNNGC 5 cut(s) 54, 116, 125, 2459, 2882
NciI CCSGG 1 cut(s) 1264
NheI GCTAGC 3 cut(s) 53, 550, 2608
NlaIV GGNNCC 3 cut(s) 415, 2705, 2967
NmuCI GTSAC 1 cut(s) 3043
NsiI ATGCAT 1 cut(s) 2464
NspI RCATGY 3 cut(s) 727, 1090, 2882
PciI ACATGT 3 cut(s) 723, 1086, 2878
PciSI GCTCTTC 1 cut(s) 117
PdmI GAANNNNTTC 7 cut(s) 630, 1061, 1896, 2428, 2521, 2796, 2920
PfeI GAWTC 4 cut(s) 796, 1624, 2921, 3233
PflMI CCANNNNNTGG 2 cut(s) 864, 2975
PleI GAGTC 3 cut(s) 739, 2105, 2154
PpsI GAGTC 3 cut(s) 739, 2105, 2154
Ppu21I YACGTR 1 cut(s) 2363
PscI ACATGT 3 cut(s) 723, 1086, 2878
PshBI ATTAAT 1 cut(s) 3252
PsiI TTATAA 1 cut(s) 543
Psp124BI GAGCTC 1 cut(s) 2067
Psp6I CCWGG 2 cut(s) 2032, 2308
PspEI GGTNACC 1 cut(s) 1721
PspFI CCCAGC 1 cut(s) 2843
PspGI CCWGG 2 cut(s) 2032, 2308
PspN4I GGNNCC 3 cut(s) 415, 2705, 2967
PspPI GGNCC 3 cut(s) 845, 1880, 2186
PsrI GAACNNNNNNTAC 2 cut(s) 236, 268
PstNI CAGNNNCTG 1 cut(s) 2652
PsuI RGATCY 3 cut(s) 2071, 2285, 2313
RsaI GTAC 8 cut(s) 88, 219, 991, 1560, 1640, 2682, 3014, 3120
RsaNI GTAC 8 cut(s) 87, 218, 990, 1559, 1639, 2681, 3013, 3119
RseI CAYNNNNRTG 1 cut(s) 2808
SacI GAGCTC 1 cut(s) 2067
SapI GCTCTTC 1 cut(s) 117
Sau96I GGNCC 3 cut(s) 845, 1880, 2186
ScaI AGTACT 2 cut(s) 1560, 3120
SchI GAGTC 3 cut(s) 739, 2106, 2154
ScrFI CCNGG 3 cut(s) 1264, 2034, 2310
SduI GDGCHC 4 cut(s) 272, 2067, 2245, 2878
SfaNI GCATC 3 cut(s) 1487, 2789, 3124
SfcI CTRYAG 2 cut(s) 1619, 2653
SgrAI CRCCGGYG 1 cut(s) 1205
SinI GGWCC 3 cut(s) 845, 1880, 2186
SmiMI CAYNNNNRTG 1 cut(s) 2808
SmlI CTYRAG 6 cut(s) 319, 593, 2132, 2221, 2708, 2943
SmoI CTYRAG 6 cut(s) 319, 593, 2132, 2221, 2708, 2943
SnaBI TACGTA 1 cut(s) 2363
SsiI CCGC 6 cut(s) 96, 234, 281, 1302, 1766, 2184
SspI AATATT 2 cut(s) 2328, 2617
SstI GAGCTC 1 cut(s) 2067
StyD4I CCNGG 3 cut(s) 1262, 2032, 2308
StyI CCWWGG 3 cut(s) 1630, 2001, 2164
TaaI ACNGT 8 cut(s) 86, 1463, 1563, 1943, 2565, 2831, 3017, 3043
TaiI ACGT 4 cut(s) 945, 2267, 2365, 2541
TaqI TCGA 7 cut(s) 81, 315, 387, 2439, 2589, 2626, 2924
TatI WGTACW 4 cut(s) 1558, 1638, 3012, 3118
TauI GCSGC 3 cut(s) 236, 1305, 1769
TfiI GAWTC 4 cut(s) 796, 1624, 2921, 3233
TscAI CASTG 5 cut(s) 525, 875, 919, 1594, 2834
TseFI GTSAC 1 cut(s) 3043
TseI GCWGC 7 cut(s) 68, 236, 283, 1134, 1551, 1965, 2384
Tsp45I GTSAC 1 cut(s) 3043
TspGWI ACGGA 2 cut(s) 411, 3077
TspRI CASTG 5 cut(s) 525, 875, 919, 1594, 2834
Van91I CCANNNNNTGG 2 cut(s) 864, 2975
VneI GTGCAC 2 cut(s) 2241, 2874
VpaK11BI GGWCC 3 cut(s) 845, 1880, 2186
VspI ATTAAT 1 cut(s) 3252
XceI RCATGY 3 cut(s) 727, 1090, 2882
XcmI CCANNNNNNNNNTGG 2 cut(s) 861, 1824
XmiI GTMKAC 3 cut(s) 33, 562, 772
XmnI GAANNNNTTC 7 cut(s) 630, 1061, 1896, 2428, 2521, 2796, 2920
ZrmI AGTACT 2 cut(s) 1560, 3120
Zsp2I ATGCAT 1 cut(s) 2464
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.