Rroxscaffold_2G00128280

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
63969372 .. 63974560
5189 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00128280.1

Sequence Viewer

Length: 3369 bp
ATGGAGAGAGTTACTTGGCTCTTCCTGATATACTTGATTTGTTGTGAGGCGGCTAGCTGCTTATCTATGGTAGCACAAACCAACCTTAACATCACCACAGACCAGTCTGCTCTTCTTGCCCTCAAAGCCCGTATCACCAATAACCCTCAAAACATAGTCTTCAGCAACTGGTCAACCACTACTCTTGTTTGCAACTGGGTTGGAGTCACTTGTGGTGCACGCCATCATCGAATCGCAGAGTTGAACCTCTCTTACTTTGGTCTCACAGGCACCATTCCTCCGGAGCTAGGCAACTTATCTTTTCTTGTTGATCTGGACTTCAGAAATAATAGTTTTCATGGTACCTTGCCACAAGAATTGGCTCGCCTGCGCCGGTTGAAGTTTATTAACTTGGAATACAACAAGTTTATGGGAGTGATTCCATCATGGTTTGGGTCCTTGTCGAAACTTCAAATATTCAGGTTTTATGGTAATCAATTTTCCGGTTCCATCCCAGCTACAATATTCAACTTATCTGCTCTGCAAATAATTGATCTGGGTTATAACCGACTCTCAGGTAGAATACCCAGAGAAATCGGGAACCTAACAATGTTGAAGGTGATCAACCTTGATAATAATAATTTTGAAGAAATTTCAAATGAGATCGGCACCTTGAATCAACTAGAAGACTTGTCGGTGCAAGAAAATGCCTTAAAAGGGCCAATCCCTAGGACCGTCTTCAACATGTCATCTTTGACTACTGTAACTTTCTATGGAAACAACTTGAATGGTAGAATTCCTGACAATATATGTCAACATCTTCCAAATATTCAAGGATTGAATTTGGGTATCAATCAGTTTGATGGTCCGCTTCCATCCAAGTTATGGCAATGCAAACAACTTCTTGTATTAAACTTAGAGTTTAACAAGTTCAGTGGAAGAATACCCAAATATATTTGGAACTTAACCCAGATAGAGGAGATTTGGCTTGACACCAACAGCTTGACAGGTATCATACCATATGAGATTGGCTATCTTCCAAATTTAGAGAAGTTGTCGCTGAGTGATAATAATCTAAATGGCCATATCCCATCCTCAATCTTCAATATGTCCACAATAACAGCATTAGATCTCATCTTCAATCAGCTTTCAGGTAGCCTGCCAACAAACATAGGCCTTGGGCTTCCAAACCTAGAAGTGTTTAGAGCAGGAAGGAATCGCCTTAGTGGAGTAATCCCCAAATCCATCTCCAATGCTTCTGAGCTTCGGGAACTAGGTCTAGGAGAAAACTATTTTTCTGGATTTATTCCAAGCACTCTGTGCCTCTTAACAAACCTTGAATGGCTCGCATTGTTCCACAATAATTTGACCATTGATACGTCTACTCCAGAAGTTAATATTTTGTCTTGTCTGCCAAATCTTAGAAATTTGGGTTTTTTAGCCTTCGATAGCAATCCATTAAATACCAAGCTTCCATTTTCCTTCAGTAATTTCTCTACATCACTTCAACATCTTAGTTTTCTATCTTGCGGCTTGAGAGGTAACATCCCCAGTGATATAGGCAACTTGAGTAGCTTGATAGTTTTAGGCCTTGAAGTAAATCAATTGAGCGGGCCAATTCCAAGCTCAATGGGAAGACTACTGAATCTTCAAGGTTTGGATATGTATGATAACAGATTGCAAGGATACATTCCAGATGAACTTTGTAAACTAGAAAACTTAGTTGAATTGGATTTGGGTAGGAATCAACTCTCTGGTTCTATACCTTCTTGCTTGGGTAATCTAACAACATCTCTAAGAACTCTATCCTTACGGTCCAATTTGTTGAATTCCACAATACCATCTACCTTGTGGCTACTTACATATATCTTGAAACTAGACTTGTCATCCAATTCTCTAAATGGACCTCTATCAGGTGGTGTTGGTAATTTGAAAGTTGCTACATACATAAATTTATCATACAACCAATTATCTGGTAGTATACCAAGCAACGTTGGGAGTTTACCGAATTTGGTCAATCTCTCCTTAGCACATAATAGTCTAGAAGGTCCTATTCCTAGTTCCTTTGCTACCTGTTTAAGCTTAGTACAATTGGATTTATCTCAGAACAGTCTCTATGGAGTGATTCCGAATTCTCTAGTAGCACTCTCATATCTCAAGTACCTGAATTTGTCTTTCAACAAACTACAGGGAGAAATTCCAACCGGAGGTCCATTCAAAAACTTCTCTGCTAAATCGTTTATTTCCAACCGTGGACTCTGTGGTCCATCCCAATTTGGAGTTCCACCATGCAAAAGAAAAACTAGTATGTCTATCTTGAAATATGTTATTCCGGGGATCTTGTCAGCAATGCTTCTAGCGACCTCCATATTTTGGATGCTGATGTTACGCAGAAAAAAGAATGTGAAAGCTGCAACACATACTATCTTGATGCCTCAAGTTTTATGGAGAAGAGTTTCATACCAAGAGCTCTTACGTGCAACAGATGGATTCAGTGAAAGCAACTTACTTGGTACTGGGGGTTTTGGTTCAGTATATAAAGGAACATTGTCAGATGGGATAGATGTTGCAATAAAGGTTTTCAATTTGGAGTTAGAAGGGGCATTTACAAGTTTTGAGGTTGAATGTGAAGTGCTAAGCAATGTTCGTCACCGAAATGTTGTCAAAGTCATCAGTTGCTGCAGTCAAATTGATTTTAAAGGTCTTGTATTGAATTACTTGCCTAATGGGAGCCTTGAGAAGTGGTTGTACTCTCAGAATTCTTCTTTGAACATAATGCAGAGGTTGGATATAATGATAGATGTTGCATCGGCATTGGAGTACCTTCATCATGGTTATGAAGTACCTATTGTCCATTGTGATTTGAAGCCAAGCAACATCCTACTAGATGATGATATGGTTGCACATGTTGCTGATTTTGGTATTGCGAGACTCTTGGGTGGAGGAGATTCTATGACTCAAACCATGACCCTAGCCACAATTGGGTATATTGCTCCAGAGTATGGAATGGAAGGAATAGTGACCAAAAGAGGGGATGTGTATAGTTTTGGTATTGTAGTGATGGAAACATTCACAAGAAGGAAGCCAACCGATGAGATCTTCGCTGGGGAAATGAGACTAAATCAATGGGTTGCAAATTTCCTAGTTGCAGATGCGATAGTTGAAGTTGTGGATACTAGTTTACTTGGAAGCGAGGAGGCTCATGACTTCATGAGCAAGAGGGAGTGCTTATCATCCATTATGAGATTAGCTGTTGCTTGTTCAGCAGAATCACCGGAAGAGAGGATAAACATGCAGAAGGCTGTAGCCATGCTTAAAACAATCAAGGTCAAGTTTTCAAAGGACACTGCTGCAAGAGGTGTGGTGTTGAACCATCGTCCTGTTTTGTAA

Protein Analysis

1122

Amino Acids

123.87

Weight (kDa)

6.62

Isoelectric Point (pI)

33.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 33 - 71 1.3e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 81 - 158 1.7e-06 Leucine-rich repeat region
LRR_14 PF23598 170 - 251 1.2e-07 Leucine-rich repeat region
LRR_14 PF23598 335 - 529 9.1e-08 Leucine-rich repeat region
LRR_8 PF13855 389 - 449 2.7e-06 Leucine rich repeat
LRR_14 PF23598 500 - 600 2.3e-06 Leucine-rich repeat region
LRR_8 PF13855 662 - 722 1.7e-08 Leucine rich repeat
Pkinase PF00069 825 - 1095 1.5e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 828 - 1096 1.4e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 543
AasI GACNNNNNNGTC 1 cut(s) 2241
Acc65I GGTACC 1 cut(s) 341
AccB1I GGYRCC 3 cut(s) 269, 341, 647
AccB7I CCANNNNNTGG 3 cut(s) 864, 2352, 2981
AccBSI CCGCTC 1 cut(s) 1590
AccI GTMKAC 2 cut(s) 1361, 1960
AccIII TCCGGA 1 cut(s) 280
AciI CCGC 4 cut(s) 50, 848, 1509, 1590
AclI AACGTT 1 cut(s) 1971
AclWI GGATC 1 cut(s) 2324
AcoI YGGCCR 1 cut(s) 1060
AcuI CTGAAG 3 cut(s) 145, 304, 1447
AdeI CACNNNGTG 1 cut(s) 1299
AfaI GTAC 7 cut(s) 343, 2067, 2141, 2494, 2729, 2801, 2823
AflIII ACRYGT 2 cut(s) 723, 2884
AhlI ACTAGT 2 cut(s) 2282, 3155
AjuI GAANNNNNNNTTGG 2 cut(s) 2244, 2276
Alw21I GWGCWC 2 cut(s) 220, 2451
Alw26I GTCTC 4 cut(s) 266, 2096, 2902, 3088
Alw44I GTGCAC 1 cut(s) 216
AlwI GGATC 1 cut(s) 2324
AlwNI CAGNNNCTG 2 cut(s) 168, 2658
Aor13HI TCCGGA 1 cut(s) 280
AoxI GGCC 5 cut(s) 698, 1060, 1153, 1567, 1592
ApaLI GTGCAC 1 cut(s) 216
ApeKI GCWGC 4 cut(s) 57, 2390, 2658, 3329
Asp700I GAANNNNTTC 1 cut(s) 2434
Asp718I GGTACC 1 cut(s) 341
AspA2I CCTAGG 1 cut(s) 707
AspLEI GCGC 1 cut(s) 372
AsuC2I CCSGG 1 cut(s) 2313
AsuHPI GGTGA 5 cut(s) 85, 127, 610, 2621, 3243
AsuNHI GCTAGC 1 cut(s) 53
AvaII GGWCC 8 cut(s) 435, 711, 845, 1794, 1883, 2027, 2189, 2243
AvrII CCTAGG 1 cut(s) 707
BaeGI GKGCMC 1 cut(s) 220
BalI TGGCCA 1 cut(s) 1062
BanI GGYRCC 3 cut(s) 269, 341, 647
BanII GRGCYC 1 cut(s) 2451
BarI GAAGNNNNNNTAC 2 cut(s) 2711, 2743
BbsI GAAGAC 4 cut(s) 151, 672, 709, 1621
Bbv12I GWGCWC 2 cut(s) 220, 2451
BbvI GCAGC 4 cut(s) 44, 2377, 2645, 3316
BciVI GTATCC 2 cut(s) 1658, 3145
BclI TGATCA 1 cut(s) 600
BcnI CCSGG 1 cut(s) 2313
BcoDI GTCTC 4 cut(s) 266, 2096, 2902, 3088
BcuI ACTAGT 2 cut(s) 2282, 3155
BfmI CTRYAG 3 cut(s) 2165, 2659, 3282
BfuI GTATCC 2 cut(s) 1658, 3145
BglII AGATCT 2 cut(s) 1108, 3075
BisI GCNGC 6 cut(s) 51, 58, 1510, 2391, 2659, 3330
BlnI CCTAGG 1 cut(s) 707
BlpI GCTNAGC 1 cut(s) 2615
BlsI GCNGC 6 cut(s) 52, 59, 1511, 2392, 2660, 3331
Bme1390I CCNGG 1 cut(s) 2313
Bme18I GGWCC 8 cut(s) 435, 711, 845, 1794, 1883, 2027, 2189, 2243
BmiI GGNNCC 7 cut(s) 271, 343, 436, 487, 581, 649, 2711
BmrFI CCNGG 1 cut(s) 2313
BmrI ACTGGG 3 cut(s) 205, 1524, 2505
BmsI GCATC 4 cut(s) 2346, 2400, 2795, 3121
BmtI GCTAGC 1 cut(s) 57
BmuI ACTGGG 3 cut(s) 205, 1524, 2505
BpiI GAAGAC 4 cut(s) 151, 672, 709, 1621
BpmI CTGGAG 2 cut(s) 1350, 2958
Bpu10I CCTNAGC 1 cut(s) 2005
Bpu1102I GCTNAGC 1 cut(s) 2615
BpuEI CTTGAG 5 cut(s) 1534, 1567, 2120, 2400, 2735
BpuMI CCSGG 1 cut(s) 2313
BsaAI YACGTR 1 cut(s) 2456
BsaBI GATNNNNATC 2 cut(s) 1050, 1431
BsaI GGTCTC 1 cut(s) 266
BsaJI CCNNGG 4 cut(s) 707, 1156, 2230, 2312
BsaWI WCCGGW 4 cut(s) 280, 482, 2183, 3253
BsaXI ACNNNNNCTCC 4 cut(s) 262, 292, 1348, 1378
Bse118I RCCGGY 1 cut(s) 372
Bse1I ACTGG 5 cut(s) 103, 173, 200, 1530, 2500
Bse3DI GCAATG 3 cut(s) 875, 2334, 2626
Bse8I GATNNNNATC 2 cut(s) 1050, 1431
BseAI TCCGGA 1 cut(s) 280
BseDI CCNNGG 4 cut(s) 707, 1156, 2230, 2312
BseJI GATNNNNATC 2 cut(s) 1050, 1431
BseMI GCAATG 3 cut(s) 875, 2334, 2626
BseMII CTCAG 5 cut(s) 567, 1031, 1230, 2096, 2747
BseNI ACTGG 5 cut(s) 103, 173, 200, 1530, 2500
BseRI GAGGAG 3 cut(s) 971, 2937, 3188
BseSI GKGCMC 1 cut(s) 220
BseXI GCAGC 4 cut(s) 44, 2377, 2645, 3316
BseYI CCCAGC 2 cut(s) 493, 3083
BshFI GGCC 5 cut(s) 700, 1062, 1155, 1569, 1594
BshNI GGYRCC 3 cut(s) 269, 341, 647
BsiHKAI GWGCWC 2 cut(s) 220, 2451
BsiSI CCGG 6 cut(s) 281, 373, 483, 2184, 2312, 3254
BsmAI GTCTC 4 cut(s) 266, 2096, 2902, 3088
BsnI GGCC 5 cut(s) 700, 1062, 1155, 1569, 1594
Bso31I GGTCTC 1 cut(s) 266
Bsp1286I GDGCHC 2 cut(s) 220, 2451
Bsp13I TCCGGA 1 cut(s) 280
Bsp143I GATC 7 cut(s) 310, 532, 600, 642, 1108, 2316, 3075
Bsp1720I GCTNAGC 1 cut(s) 2615
BspACI CCGC 4 cut(s) 50, 848, 1509, 1590
BspANI GGCC 5 cut(s) 700, 1062, 1155, 1569, 1594
BspCNI CTCAG 5 cut(s) 566, 1032, 1231, 2095, 2746
BspEI TCCGGA 1 cut(s) 280
BspHI TCATGA 2 cut(s) 3181, 3189
BspLI GGNNCC 7 cut(s) 271, 343, 436, 487, 581, 649, 2711
BspMAI CTGCAG 1 cut(s) 2663
BspOI GCTAGC 1 cut(s) 57
BspPI GGATC 1 cut(s) 2324
BspQI GCTCTTC 2 cut(s) 26, 117
BspT107I GGYRCC 3 cut(s) 269, 341, 647
BspTNI GGTCTC 1 cut(s) 266
BsrBI CCGCTC 1 cut(s) 1590
BsrDI GCAATG 3 cut(s) 875, 2334, 2626
BsrFI RCCGGY 1 cut(s) 372
BsrI ACTGG 5 cut(s) 103, 173, 200, 1530, 2500
BssAI RCCGGY 1 cut(s) 372
BssECI CCNNGG 4 cut(s) 707, 1156, 2230, 2312
BssMI GATC 7 cut(s) 310, 532, 600, 642, 1108, 2316, 3075
BssNAI GTATAC 1 cut(s) 1961
BssT1I CCWWGG 2 cut(s) 707, 1156
Bst1107I GTATAC 1 cut(s) 1961
Bst4CI ACNGT 5 cut(s) 715, 742, 1794, 2090, 2231
Bst6I CTCTTC 4 cut(s) 26, 117, 2425, 3252
BstAPI GCANNNNNTGC 2 cut(s) 1299, 2888
BstBAI YACGTR 1 cut(s) 2456
BstC8I GCNNGC 7 cut(s) 55, 220, 364, 368, 1139, 1326, 1592
BstDSI CCRYGG 1 cut(s) 2230
BstENI CCTNNNNNAGG 1 cut(s) 1890
BstHHI GCGC 1 cut(s) 372
BstKTI GATC 7 cut(s) 313, 535, 603, 645, 1111, 2319, 3078
BstMAI GTCTC 4 cut(s) 266, 2096, 2902, 3088
BstMBI GATC 7 cut(s) 310, 532, 600, 642, 1108, 2316, 3075
BstMWI GCNNNNNNNGC 5 cut(s) 116, 125, 1299, 2888, 3242
BstNSI RCATGY 3 cut(s) 727, 2888, 3274
BstSCI CCNGG 1 cut(s) 2311
BstSFI CTRYAG 3 cut(s) 2165, 2659, 3282
BstSLI GKGCMC 1 cut(s) 220
BstV1I GCAGC 4 cut(s) 44, 2377, 2645, 3316
BstV2I GAAGAC 4 cut(s) 151, 672, 709, 1621
BstX2I RGATCY 3 cut(s) 1108, 2316, 3075
BstXI CCANNNNNNTGG 1 cut(s) 1952
BstYI RGATCY 3 cut(s) 1108, 2316, 3075
BstZ17I GTATAC 1 cut(s) 1961
BsuI GTATCC 2 cut(s) 1658, 3145
BsuRI GGCC 5 cut(s) 700, 1062, 1155, 1569, 1594
BtgI CCRYGG 1 cut(s) 2230
BtsI GCAGTG 1 cut(s) 3324
BtsIMutI CAGTG 4 cut(s) 919, 1537, 2479, 3324
Cac8I GCNNGC 7 cut(s) 55, 220, 364, 368, 1139, 1326, 1592
CaiI CAGNNNCTG 2 cut(s) 168, 2658
CciI TCATGA 2 cut(s) 3181, 3189
CfoI GCGC 1 cut(s) 372
Cfr10I RCCGGY 1 cut(s) 372
Csp6I GTAC 7 cut(s) 342, 2066, 2140, 2493, 2728, 2800, 2822
CspCI CAANNNNNGTGG 8 cut(s) 166, 201, 339, 374, 895, 930, 3321, 3356
CviQI GTAC 7 cut(s) 342, 2066, 2140, 2493, 2728, 2800, 2822
DpnI GATC 7 cut(s) 312, 534, 602, 644, 1110, 2318, 3077
DpnII GATC 7 cut(s) 310, 532, 600, 642, 1108, 2316, 3075
DraI TTTAAA 1 cut(s) 2677
DraIII CACNNNGTG 1 cut(s) 1299
DrdI GACNNNNNNGTC 1 cut(s) 2241
DseDI GACNNNNNNGTC 1 cut(s) 2241
EaeI YGGCCR 1 cut(s) 1060
Eam1104I CTCTTC 4 cut(s) 26, 117, 2425, 3252
EarI CTCTTC 4 cut(s) 26, 117, 2425, 3252
Ecl136II GAGCTC 1 cut(s) 2449
Eco130I CCWWGG 2 cut(s) 707, 1156
Eco147I AGGCCT 2 cut(s) 1155, 1569
Eco24I GRGCYC 1 cut(s) 2451
Eco31I GGTCTC 1 cut(s) 266
Eco47I GGWCC 8 cut(s) 435, 711, 845, 1794, 1883, 2027, 2189, 2243
Eco53kI GAGCTC 1 cut(s) 2449
Eco57I CTGAAG 3 cut(s) 145, 304, 1447
EcoICRI GAGCTC 1 cut(s) 2449
EcoNI CCTNNNNNAGG 1 cut(s) 1890
EcoO109I RGGNCCY 2 cut(s) 435, 2027
EcoRI GAATTC 4 cut(s) 774, 1807, 2110, 2737
EcoT14I CCWWGG 2 cut(s) 707, 1156
EcoT38I GRGCYC 1 cut(s) 2451
ErhI CCWWGG 2 cut(s) 707, 1156
FauI CCCGC 1 cut(s) 1583
FauNDI CATATG 1 cut(s) 1000
FbaI TGATCA 1 cut(s) 600
FblI GTMKAC 2 cut(s) 1361, 1960
Fnu4HI GCNGC 6 cut(s) 51, 58, 1510, 2391, 2659, 3330
FriOI GRGCYC 1 cut(s) 2451
Fsp4HI GCNGC 6 cut(s) 51, 58, 1510, 2391, 2659, 3330
GlaI GCGC 1 cut(s) 371
GluI GCNGC 6 cut(s) 51, 58, 1510, 2391, 2659, 3330
GsaI CCCAGC 2 cut(s) 497, 3087
GsuI CTGGAG 2 cut(s) 1350, 2958
HaeIII GGCC 5 cut(s) 700, 1062, 1155, 1569, 1594
HapII CCGG 6 cut(s) 281, 373, 483, 2184, 2312, 3254
HhaI GCGC 1 cut(s) 372
Hin6I GCGC 1 cut(s) 370
HinP1I GCGC 1 cut(s) 370
HincII GTYRAC 2 cut(s) 174, 794
HindII GTYRAC 2 cut(s) 174, 794
HindIII AAGCTT 2 cut(s) 1448, 2059
HpaII CCGG 6 cut(s) 281, 373, 483, 2184, 2312, 3254
HphI GGTGA 5 cut(s) 85, 127, 610, 2621, 3243
Hpy188I TCNGA 6 cut(s) 323, 1240, 2085, 2109, 2533, 2736
HpyCH4III ACNGT 5 cut(s) 715, 742, 1794, 2090, 2231
HpyCH4IV ACGT 3 cut(s) 1358, 1971, 2455
HpyF10VI GCNNNNNNNGC 5 cut(s) 116, 125, 1299, 2888, 3242
HpySE526I ACGT 3 cut(s) 1358, 1971, 2455
HspAI GCGC 1 cut(s) 370
Kpn2I TCCGGA 1 cut(s) 280
KpnI GGTACC 1 cut(s) 345
Ksp22I TGATCA 1 cut(s) 600
Kzo9I GATC 7 cut(s) 310, 532, 600, 642, 1108, 2316, 3075
LguI GCTCTTC 2 cut(s) 26, 117
LmnI GCTCC 3 cut(s) 283, 2709, 2977
Lsp1109I GCAGC 4 cut(s) 44, 2377, 2645, 3316
LweI GCATC 4 cut(s) 2346, 2400, 2795, 3121
MaeII ACGT 3 cut(s) 1358, 1971, 2455
MaeIII GTNAC 7 cut(s) 10, 205, 742, 1520, 2364, 2627, 2998
MalI GATC 7 cut(s) 312, 534, 602, 644, 1110, 2318, 3077
MbiI CCGCTC 1 cut(s) 1590
MboI GATC 7 cut(s) 310, 532, 600, 642, 1108, 2316, 3075
MfeI CAATTG 3 cut(s) 1583, 2069, 2958
MflI RGATCY 3 cut(s) 1108, 2316, 3075
MhlI GDGCHC 2 cut(s) 220, 2451
MlsI TGGCCA 1 cut(s) 1062
MluNI TGGCCA 1 cut(s) 1062
MlyI GAGTC 5 cut(s) 213, 543, 2229, 2904, 2929
MmeI TCCRAC 4 cut(s) 181, 2204, 2250, 2745
Mox20I TGGCCA 1 cut(s) 1062
MroI TCCGGA 1 cut(s) 280
MroXI GAANNNNTTC 1 cut(s) 2434
MscI TGGCCA 1 cut(s) 1062
MslI CAYNNNNRTG 2 cut(s) 2634, 2814
Msp20I TGGCCA 1 cut(s) 1062
MspI CCGG 6 cut(s) 281, 373, 483, 2184, 2312, 3254
MspR9I CCNGG 1 cut(s) 2313
MunI CAATTG 3 cut(s) 1583, 2069, 2958
MwoI GCNNNNNNNGC 5 cut(s) 116, 125, 1299, 2888, 3242
NciI CCSGG 1 cut(s) 2313
NdeI CATATG 1 cut(s) 1000
NdeII GATC 7 cut(s) 310, 532, 600, 642, 1108, 2316, 3075
NheI GCTAGC 1 cut(s) 53
NlaIV GGNNCC 7 cut(s) 271, 343, 436, 487, 581, 649, 2711
NmuCI GTSAC 3 cut(s) 205, 2627, 2998
NspI RCATGY 3 cut(s) 727, 2888, 3274
PagI TCATGA 2 cut(s) 3181, 3189
PceI AGGCCT 2 cut(s) 1155, 1569
PciI ACATGT 2 cut(s) 723, 2884
PciSI GCTCTTC 2 cut(s) 26, 117
PcsI WCGNNNNNNNCGW 1 cut(s) 226
PdmI GAANNNNTTC 1 cut(s) 2434
PflMI CCANNNNNTGG 3 cut(s) 864, 2352, 2981
PkrI GCNGC 6 cut(s) 52, 59, 1511, 2392, 2660, 3331
PleI GAGTC 5 cut(s) 212, 543, 2229, 2904, 2929
PpsI GAGTC 5 cut(s) 212, 543, 2229, 2904, 2929
Ppu21I YACGTR 1 cut(s) 2456
PpuMI RGGWCCY 2 cut(s) 435, 2027
PscI ACATGT 2 cut(s) 723, 2884
PsiI TTATAA 1 cut(s) 543
Psp124BI GAGCTC 1 cut(s) 2451
Psp1406I AACGTT 1 cut(s) 1971
Psp5II RGGWCCY 2 cut(s) 435, 2027
PspFI CCCAGC 2 cut(s) 493, 3083
PspN4I GGNNCC 7 cut(s) 271, 343, 436, 487, 581, 649, 2711
PspPPI RGGWCCY 2 cut(s) 435, 2027
PsrI GAACNNNNNNTAC 2 cut(s) 236, 268
PstI CTGCAG 1 cut(s) 2663
PstNI CAGNNNCTG 2 cut(s) 168, 2658
PsuI RGATCY 3 cut(s) 1108, 2316, 3075
RsaI GTAC 7 cut(s) 343, 2067, 2141, 2494, 2729, 2801, 2823
RsaNI GTAC 7 cut(s) 342, 2066, 2140, 2493, 2728, 2800, 2822
RseI CAYNNNNRTG 2 cut(s) 2634, 2814
SacI GAGCTC 1 cut(s) 2451
SapI GCTCTTC 2 cut(s) 26, 117
SatI GCNGC 6 cut(s) 51, 58, 1510, 2391, 2659, 3330
Sau3AI GATC 7 cut(s) 310, 532, 600, 642, 1108, 2316, 3075
SchI GAGTC 5 cut(s) 213, 543, 2229, 2904, 2929
ScrFI CCNGG 1 cut(s) 2313
SduI GDGCHC 2 cut(s) 220, 2451
SfaNI GCATC 4 cut(s) 2346, 2400, 2795, 3121
SfcI CTRYAG 3 cut(s) 2165, 2659, 3282
SinI GGWCC 8 cut(s) 435, 711, 845, 1794, 1883, 2027, 2189, 2243
SmiMI CAYNNNNRTG 2 cut(s) 2634, 2814
SmlI CTYRAG 5 cut(s) 1513, 1546, 2135, 2415, 2714
SmoI CTYRAG 5 cut(s) 1513, 1546, 2135, 2415, 2714
SpeI ACTAGT 2 cut(s) 2282, 3155
SseBI AGGCCT 2 cut(s) 1155, 1569
SsiI CCGC 4 cut(s) 50, 848, 1509, 1590
SspI AATATT 4 cut(s) 456, 504, 808, 1378
SstI GAGCTC 1 cut(s) 2451
StuI AGGCCT 2 cut(s) 1155, 1569
StyD4I CCNGG 1 cut(s) 2311
StyI CCWWGG 2 cut(s) 707, 1156
TaaI ACNGT 5 cut(s) 715, 742, 1794, 2090, 2231
TaiI ACGT 3 cut(s) 1361, 1974, 2458
TaqI TCGA 3 cut(s) 229, 443, 1425
TatI WGTACW 2 cut(s) 2065, 2727
TauI GCSGC 2 cut(s) 53, 1512
TscAI CASTG 4 cut(s) 919, 1537, 2479, 3331
TseFI GTSAC 3 cut(s) 205, 2627, 2998
TseI GCWGC 4 cut(s) 57, 2390, 2658, 3329
Tsp45I GTSAC 3 cut(s) 205, 2627, 2998
TspDTI ATGAA 6 cut(s) 326, 1692, 2427, 2795, 2832, 3178
TspRI CASTG 4 cut(s) 919, 1537, 2479, 3331
Van91I CCANNNNNTGG 3 cut(s) 864, 2352, 2981
VneI GTGCAC 1 cut(s) 216
VpaK11BI GGWCC 8 cut(s) 435, 711, 845, 1794, 1883, 2027, 2189, 2243
XagI CCTNNNNNAGG 1 cut(s) 1890
XbaI TCTAGA 1 cut(s) 2020
XceI RCATGY 3 cut(s) 727, 2888, 3274
XcmI CCANNNNNNNNNTGG 2 cut(s) 861, 1827
XmaJI CCTAGG 1 cut(s) 707
XmiI GTMKAC 2 cut(s) 1361, 1960
XmnI GAANNNNTTC 1 cut(s) 2434
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.