Rroxscaffold_5G00347320

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Reverse (-)
18665123 .. 18666997
1875 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00347320.1

Sequence Viewer

Length: 1875 bp
ATGGGTAATAATCTTAATGGCCTCGTCCCATCCACAGTCTTCAACATGTCCACAATAAGAGTGATATCTATTAGTAGTAATAATCTCTCAGGTAGCTTCCCAACAAACAGAGGCCTTGGATTTCCAAACATACAAGAGTTTTATGCATCGAGTAATAAACTCAGTGGAGTAATTCCCAAATCCATCTCGAATGCTTCTAAGCTCACTGGCCTAGACCTGGGAGGTAACTCATTTTATGGCTCTATACCTAGCTCGCTTTGTGCCTCACCAAACCTTGAGCGGCTGGTCTTGGAATCGAACAATTTGACGATTGACAAGTTTACTCCAGAAGTAAATATGCTCTCTTGCTTAGGCACTCTTACAAAGTTGAGAAAATTATGGCTGTCTCACAATCCATTAAATGTCATGCTTCCGTTTTCTCTCGGAAATCTCTCTACATCACTTGAATATATGAGATTGAGGAATTGCAACATGTCGGGTAAGATACCGAATGATATTGGCAACTTGAGCAGCCTGACCTTCTTAGACTTGGGATTAAATCAATTGAGTGGATCAATTCCAACTACCATAGGCAGACTGCAAAAACTTCAAGGTTTTTACTTGAATAACAACAGATTGCAAGGTTATGTTCCAGATGAACTTTGTCAGCTGAAAAAACTAGGTGACTTATTTCTGCAAGGCAATCAACTCTCTGGTTCTATACCTTCCTGCTTGGGTGATCTAAATGCAGCTCTAAGAAGTCTATCACTGGGGTCCAATTTGTTAACTTCAACAATACCATCTACCTTGTGGAGGCTTACTTATATCCTGCACTTGGACTTGTCATCCAATTATCTAAGTGGACTTCTCTCAGAAGAGCTTGGTAATTTGAGAGTTGTGACAGATATATATTTATCAAACAACCATTTTTCGGGTTTGATACCGGATAGCATTGGGTCTCTCACAGATCTGGTCATTCTCAACCTAGCAAACAATAGTTTGGAAGGCTCTATTCCTAGTTCTCTCGGACAGTCTCTAAGCTTAGAGATCTTGGATTTATCCAAAAACAATCTGTCAGGCGTGATTCCAATGTCTCTAGAAGCACTTTCACATCTCAAATATTTGAATTTGTCGATCAACAGACTCCATGGAGAAATTCCAAAAGGTGGAGCTTTTGGACACTTCTCTAATATCTCATTCTTCTCGAATGGTGAACTCTGTGGTTCACCCCACTTGCAGGTTCCACTCTGTCCAAATTCAAGGAGGAGTACTCCACATAGATGCATTACTATTTTGAAGTATCTTATTCCAGGCATCGCCTTAGCAATACTCATAGTGGCCTTCATATGGAGATTGATATTGCATAGAAAAAGGAATGCAAAAGCTGCAAAAGTGACTGCACTGTTACCACCACAACCTCTTTGGAGAAGAGTTTCATACAAAGAACTCCGAAGGGCGACATATGGATTTGCTGAAACTAACTTACTTGGCACTGGGGGTCTTGGCTCGGTTTATAGAGGGACACTGTCAGATGGGATTTTAGTGGCCATTAAGGTATTCAATGTACAGTTGGAAGAGGCTTTGACAAGTTTTGACATGGAACGTAAAATGCTAAGTACTATACGTCATCGAAATCTTATCAAAATCATCAGTTGTTGCATTGATATTGATTTTAGAGCTATGGTACTTAGCTACATGCCTAATGGGAGCCTTGAGAAGTGGTTGTACTCTGATAACTTTTCGCTGAGTATCCTGCAGAGGTTGAATATTTTGATAGATGTTGCATTGGCATTGGAATACCTCCATCATGGTTACGAAACAACGATTGTTCATTGTGATTTGAAGCCCAGCAACATACTACTAGATGATGATATGGTTGCACATGCATGTTGCTGA

Protein Analysis

624

Amino Acids

68.44

Weight (kDa)

8.77

Isoelectric Point (pI)

41.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 110 - 241 2.5e-08 Leucine-rich repeat region
LRR_8 PF13855 245 - 303 2.7e-06 Leucine rich repeat
LRR_8 PF13855 317 - 375 1.6e-06 Leucine rich repeat
Pkinase PF00069 485 - 617 2.4e-23 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 487 - 620 1.6e-21 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1207
AccB7I CCANNNNNTGG 1 cut(s) 1145
AccBSI CCGCTC 1 cut(s) 280
AciI CCGC 1 cut(s) 280
AclWI GGATC 1 cut(s) 559
AcoI YGGCCR 1 cut(s) 1524
AcsI RAATTY 3 cut(s) 1105, 1134, 1234
AfaI GTAC 5 cut(s) 1249, 1545, 1597, 1665, 1706
AfiI CCNNNNNNNGG 7 cut(s) 217, 792, 814, 910, 1145, 1216, 1326
AflIII ACRYGT 2 cut(s) 45, 471
AjnI CCWGG 2 cut(s) 216, 1288
Alw26I GTCTC 4 cut(s) 390, 942, 1017, 1077
AlwI GGATC 1 cut(s) 559
AoxI GGCC 5 cut(s) 19, 112, 208, 1317, 1524
ApeKI GCWGC 3 cut(s) 510, 728, 1364
ApoI RAATTY 3 cut(s) 1105, 1134, 1234
Asp700I GAANNNNTTC 1 cut(s) 1411
AspS9I GGNCC 1 cut(s) 753
AsuHPI GGTGA 5 cut(s) 258, 674, 728, 1197, 1202
AvaII GGWCC 1 cut(s) 753
BalI TGGCCA 1 cut(s) 1526
BarI GAAGNNNNNNTAC 2 cut(s) 1688, 1720
BbsI GAAGAC 1 cut(s) 31
BbvI GCAGC 3 cut(s) 522, 740, 1351
BccI CCATC 5 cut(s) 37, 191, 787, 1505, 1791
BciT130I CCWGG 2 cut(s) 218, 1290
BciVI GTATCC 1 cut(s) 1739
BcoDI GTCTC 4 cut(s) 390, 942, 1017, 1077
BfaI CTAG 7 cut(s) 212, 249, 659, 965, 996, 1076, 1841
BfmI CTRYAG 1 cut(s) 1733
BfuAI ACCTGC 1 cut(s) 1207
BfuI GTATCC 1 cut(s) 1739
BglII AGATCT 2 cut(s) 946, 1026
BisI GCNGC 4 cut(s) 281, 511, 729, 1365
BlsI GCNGC 4 cut(s) 282, 512, 730, 1366
BmcAI AGTACT 2 cut(s) 1249, 1597
Bme1390I CCNGG 2 cut(s) 218, 1290
Bme18I GGWCC 1 cut(s) 753
BmgT120I GGNCC 1 cut(s) 753
BmiI GGNNCC 3 cut(s) 754, 1221, 1688
BmrFI CCNGG 2 cut(s) 218, 1290
BmrI ACTGGG 2 cut(s) 758, 1482
BmsI GCATC 3 cut(s) 155, 1250, 1302
BmuI ACTGGG 2 cut(s) 758, 1482
BpiI GAAGAC 1 cut(s) 31
BplI GAGNNNNNCTC 2 cut(s) 1234, 1266
BpmI CTGGAG 1 cut(s) 309
Bpu10I CCTNAGC 2 cut(s) 349, 1300
BpuEI CTTGAG 3 cut(s) 296, 526, 1712
BsaI GGTCTC 1 cut(s) 942
BsaJI CCNNGG 3 cut(s) 115, 217, 1126
BsaWI WCCGGW 1 cut(s) 922
Bsc4I CCNNNNNNNGG 7 cut(s) 217, 792, 814, 910, 1145, 1216, 1326
Bse1I ACTGG 3 cut(s) 211, 753, 1477
BseBI CCWGG 2 cut(s) 218, 1290
BseDI CCNNGG 3 cut(s) 115, 217, 1126
BseGI GGATG 2 cut(s) 29, 824
BseLI CCNNNNNNNGG 7 cut(s) 217, 792, 814, 910, 1145, 1216, 1326
BseMII CTCAG 4 cut(s) 102, 175, 864, 1715
BseNI ACTGG 3 cut(s) 211, 753, 1477
BseRI GAGGAG 1 cut(s) 1258
BseXI GCAGC 3 cut(s) 522, 740, 1351
BseYI CCCAGC 1 cut(s) 1826
BsgI GTGCAG 2 cut(s) 794, 1362
BshFI GGCC 5 cut(s) 21, 114, 210, 1319, 1526
BsiSI CCGG 1 cut(s) 923
BslFI GGGAC 2 cut(s) 11, 1513
BslI CCNNNNNNNGG 7 cut(s) 217, 792, 814, 910, 1145, 1216, 1326
BsmAI GTCTC 4 cut(s) 390, 942, 1017, 1077
BsmFI GGGAC 2 cut(s) 11, 1513
BsmI GAATGC 2 cut(s) 196, 1360
BsnI GGCC 5 cut(s) 21, 114, 210, 1319, 1526
Bso31I GGTCTC 1 cut(s) 942
Bsp1407I TGTACA 1 cut(s) 1543
Bsp143I GATC 5 cut(s) 551, 718, 946, 1026, 1113
Bsp19I CCATGG 1 cut(s) 1126
BspACI CCGC 1 cut(s) 280
BspANI GGCC 5 cut(s) 21, 114, 210, 1319, 1526
BspCNI CTCAG 4 cut(s) 101, 174, 863, 1716
BspLI GGNNCC 3 cut(s) 754, 1221, 1688
BspMAI CTGCAG 1 cut(s) 1737
BspMI ACCTGC 1 cut(s) 1207
BspPI GGATC 1 cut(s) 559
BspQI GCTCTTC 1 cut(s) 849
BspTNI GGTCTC 1 cut(s) 942
BsrBI CCGCTC 1 cut(s) 280
BsrGI TGTACA 1 cut(s) 1543
BsrI ACTGG 3 cut(s) 211, 753, 1477
BssECI CCNNGG 3 cut(s) 115, 217, 1126
BssMI GATC 5 cut(s) 551, 718, 946, 1026, 1113
BssT1I CCWWGG 2 cut(s) 115, 1126
Bst2UI CCWGG 2 cut(s) 218, 1290
Bst4CI ACNGT 5 cut(s) 37, 1011, 1383, 1506, 1548
Bst6I CTCTTC 3 cut(s) 849, 1402, 1548
BstAPI GCANNNNNTGC 1 cut(s) 1364
BstAUI TGTACA 1 cut(s) 1543
BstC8I GCNNGC 1 cut(s) 254
BstDSI CCRYGG 1 cut(s) 1126
BstENI CCTNNNNNAGG 1 cut(s) 790
BstF5I GGATG 2 cut(s) 29, 824
BstKTI GATC 5 cut(s) 554, 721, 949, 1029, 1116
BstMAI GTCTC 4 cut(s) 390, 942, 1017, 1077
BstMBI GATC 5 cut(s) 551, 718, 946, 1026, 1113
BstMWI GCNNNNNNNGC 2 cut(s) 507, 1364
BstNI CCWGG 2 cut(s) 218, 1290
BstNSI RCATGY 5 cut(s) 49, 475, 1678, 1865, 1869
BstSCI CCNGG 2 cut(s) 216, 1288
BstSFI CTRYAG 1 cut(s) 1733
BstV1I GCAGC 3 cut(s) 522, 740, 1351
BstV2I GAAGAC 1 cut(s) 31
BstX2I RGATCY 2 cut(s) 946, 1026
BstYI RGATCY 2 cut(s) 946, 1026
BsuI GTATCC 1 cut(s) 1739
BsuRI GGCC 5 cut(s) 21, 114, 210, 1319, 1526
BtgI CCRYGG 1 cut(s) 1126
BtgZI GCGATG 1 cut(s) 1279
BtsCI GGATG 2 cut(s) 29, 824
BtsIMutI CAGTG 6 cut(s) 169, 204, 746, 1379, 1470, 1502
BveI ACCTGC 1 cut(s) 1207
Cac8I GCNNGC 1 cut(s) 254
Cfr13I GGNCC 1 cut(s) 753
Csp6I GTAC 5 cut(s) 1248, 1544, 1596, 1664, 1705
CviAII CATG 9 cut(s) 46, 406, 472, 1127, 1576, 1675, 1787, 1862, 1866
CviQI GTAC 5 cut(s) 1248, 1544, 1596, 1664, 1705
DpnI GATC 5 cut(s) 553, 720, 948, 1028, 1115
DpnII GATC 5 cut(s) 551, 718, 946, 1026, 1113
EaeI YGGCCR 1 cut(s) 1524
Eam1104I CTCTTC 3 cut(s) 849, 1402, 1548
EarI CTCTTC 3 cut(s) 849, 1402, 1548
Eco130I CCWWGG 2 cut(s) 115, 1126
Eco147I AGGCCT 1 cut(s) 114
Eco31I GGTCTC 1 cut(s) 942
Eco32I GATATC 1 cut(s) 66
Eco47I GGWCC 1 cut(s) 753
EcoNI CCTNNNNNAGG 1 cut(s) 790
EcoRII CCWGG 2 cut(s) 216, 1288
EcoRV GATATC 1 cut(s) 66
EcoT14I CCWWGG 2 cut(s) 115, 1126
EcoT22I ATGCAT 3 cut(s) 148, 1265, 1867
ErhI CCWWGG 2 cut(s) 115, 1126
FaeI CATG 9 cut(s) 49, 409, 475, 1130, 1579, 1678, 1790, 1865, 1869
FaqI GGGAC 2 cut(s) 11, 1513
FatI CATG 9 cut(s) 45, 405, 471, 1126, 1575, 1674, 1786, 1861, 1865
FauNDI CATATG 2 cut(s) 1325, 1441
Fnu4HI GCNGC 4 cut(s) 281, 511, 729, 1365
FokI GGATG 2 cut(s) 16, 811
Fsp4HI GCNGC 4 cut(s) 281, 511, 729, 1365
FspBI CTAG 7 cut(s) 212, 249, 659, 965, 996, 1076, 1841
GluI GCNGC 4 cut(s) 281, 511, 729, 1365
GsaI CCCAGC 1 cut(s) 1830
GsuI CTGGAG 1 cut(s) 309
HaeIII GGCC 5 cut(s) 21, 114, 210, 1319, 1526
HapII CCGG 1 cut(s) 923
Hin1II CATG 9 cut(s) 49, 409, 475, 1130, 1579, 1678, 1790, 1865, 1869
HincII GTYRAC 1 cut(s) 765
HindII GTYRAC 1 cut(s) 765
HindIII AAGCTT 1 cut(s) 1018
HinfI GANTC 3 cut(s) 293, 1063, 1122
HpaI GTTAAC 1 cut(s) 765
HpaII CCGG 1 cut(s) 923
HphI GGTGA 5 cut(s) 258, 674, 728, 1197, 1202
Hpy166II GTNNAC 6 cut(s) 51, 321, 765, 842, 1193, 1205
Hpy188I TCNGA 6 cut(s) 425, 853, 1007, 1430, 1510, 1711
Hpy188III TCNNGA 5 cut(s) 187, 326, 632, 1076, 1183
Hpy8I GTNNAC 6 cut(s) 51, 321, 765, 842, 1193, 1205
HpyAV CCTTC 5 cut(s) 529, 714, 977, 1330, 1425
HpyCH4III ACNGT 5 cut(s) 37, 1011, 1383, 1506, 1548
HpyCH4IV ACGT 2 cut(s) 1582, 1603
HpyF10VI GCNNNNNNNGC 2 cut(s) 507, 1364
HpySE526I ACGT 2 cut(s) 1582, 1603
Hsp92II CATG 9 cut(s) 49, 409, 475, 1130, 1579, 1678, 1790, 1865, 1869
KspAI GTTAAC 1 cut(s) 765
Kzo9I GATC 5 cut(s) 551, 718, 946, 1026, 1113
LguI GCTCTTC 1 cut(s) 849
LmnI GCTCC 2 cut(s) 1148, 1686
Lsp1109I GCAGC 3 cut(s) 522, 740, 1351
LweI GCATC 3 cut(s) 155, 1250, 1302
MaeI CTAG 7 cut(s) 212, 249, 659, 965, 996, 1076, 1841
MaeII ACGT 2 cut(s) 1582, 1603
MaeIII GTNAC 6 cut(s) 224, 662, 877, 1372, 1383, 1790
MalI GATC 5 cut(s) 553, 720, 948, 1028, 1115
MbiI CCGCTC 1 cut(s) 280
MboI GATC 5 cut(s) 551, 718, 946, 1026, 1113
MboII GAAGA 5 cut(s) 31, 866, 1171, 1419, 1565
MfeI CAATTG 1 cut(s) 542
MflI RGATCY 2 cut(s) 946, 1026
MlsI TGGCCA 1 cut(s) 1526
MluNI TGGCCA 1 cut(s) 1526
MlyI GAGTC 1 cut(s) 1116
MmeI TCCRAC 2 cut(s) 584, 1530
Mox20I TGGCCA 1 cut(s) 1526
Mph1103I ATGCAT 3 cut(s) 148, 1265, 1867
MroXI GAANNNNTTC 1 cut(s) 1411
MscI TGGCCA 1 cut(s) 1526
MseI TTAA 5 cut(s) 15, 398, 536, 764, 1530
MslI CAYNNNNRTG 2 cut(s) 1258, 1864
Msp20I TGGCCA 1 cut(s) 1526
MspA1I CMGCKG 1 cut(s) 649
MspI CCGG 1 cut(s) 923
MspR9I CCNGG 2 cut(s) 218, 1290
MunI CAATTG 1 cut(s) 542
Mva1269I GAATGC 2 cut(s) 196, 1360
MvaI CCWGG 2 cut(s) 218, 1290
MwoI GCNNNNNNNGC 2 cut(s) 507, 1364
NcoI CCATGG 1 cut(s) 1126
NdeI CATATG 2 cut(s) 1325, 1441
NdeII GATC 5 cut(s) 551, 718, 946, 1026, 1113
NlaIII CATG 9 cut(s) 49, 409, 475, 1130, 1579, 1678, 1790, 1865, 1869
NlaIV GGNNCC 3 cut(s) 754, 1221, 1688
NmuCI GTSAC 3 cut(s) 662, 877, 1372
NsiI ATGCAT 3 cut(s) 148, 1265, 1867
NspI RCATGY 5 cut(s) 49, 475, 1678, 1865, 1869
PceI AGGCCT 1 cut(s) 114
PciI ACATGT 2 cut(s) 45, 471
PciSI GCTCTTC 1 cut(s) 849
PctI GAATGC 2 cut(s) 196, 1360
PdmI GAANNNNTTC 1 cut(s) 1411
PfeI GAWTC 2 cut(s) 293, 1063
PflFI GACNNNGTC 1 cut(s) 1504
PflMI CCANNNNNTGG 1 cut(s) 1145
PkrI GCNGC 4 cut(s) 282, 512, 730, 1366
PleI GAGTC 1 cut(s) 1116
PpsI GAGTC 1 cut(s) 1116
PscI ACATGT 2 cut(s) 45, 471
Psp6I CCWGG 2 cut(s) 216, 1288
PspFI CCCAGC 1 cut(s) 1826
PspGI CCWGG 2 cut(s) 216, 1288
PspN4I GGNNCC 3 cut(s) 754, 1221, 1688
PspPI GGNCC 1 cut(s) 753
PstI CTGCAG 1 cut(s) 1737
PsuI RGATCY 2 cut(s) 946, 1026
PsyI GACNNNGTC 1 cut(s) 1504
PvuII CAGCTG 1 cut(s) 649
RsaI GTAC 5 cut(s) 1249, 1545, 1597, 1665, 1706
RsaNI GTAC 5 cut(s) 1248, 1544, 1596, 1664, 1705
RseI CAYNNNNRTG 2 cut(s) 1258, 1864
SapI GCTCTTC 1 cut(s) 849
SaqAI TTAA 5 cut(s) 15, 398, 536, 764, 1530
SatI GCNGC 4 cut(s) 281, 511, 729, 1365
Sau3AI GATC 5 cut(s) 551, 718, 946, 1026, 1113
Sau96I GGNCC 1 cut(s) 753
ScaI AGTACT 2 cut(s) 1249, 1597
SchI GAGTC 1 cut(s) 1116
ScrFI CCNGG 2 cut(s) 218, 1290
SfaNI GCATC 3 cut(s) 155, 1250, 1302
SfcI CTRYAG 1 cut(s) 1733
SinI GGWCC 1 cut(s) 753
SmiMI CAYNNNNRTG 2 cut(s) 1258, 1864
SmlI CTYRAG 3 cut(s) 275, 505, 1691
SmoI CTYRAG 3 cut(s) 275, 505, 1691
SseBI AGGCCT 1 cut(s) 114
SsiI CCGC 1 cut(s) 280
SspI AATATT 2 cut(s) 1100, 1747
SspMI CTAG 7 cut(s) 212, 249, 659, 965, 996, 1076, 1841
StuI AGGCCT 1 cut(s) 114
StyD4I CCNGG 2 cut(s) 216, 1288
StyI CCWWGG 2 cut(s) 115, 1126
TaaI ACNGT 5 cut(s) 37, 1011, 1383, 1506, 1548
TaiI ACGT 2 cut(s) 1585, 1606
TaqI TCGA 6 cut(s) 149, 188, 296, 1112, 1184, 1609
TatI WGTACW 4 cut(s) 1247, 1543, 1595, 1704
TauI GCSGC 1 cut(s) 283
TfiI GAWTC 2 cut(s) 293, 1063
Tru1I TTAA 5 cut(s) 15, 398, 536, 764, 1530
Tru9I TTAA 5 cut(s) 15, 398, 536, 764, 1530
TscAI CASTG 6 cut(s) 169, 211, 753, 1386, 1477, 1509
TseFI GTSAC 3 cut(s) 662, 877, 1372
TseI GCWGC 3 cut(s) 510, 728, 1364
Tsp45I GTSAC 3 cut(s) 662, 877, 1372
TspDTI ATGAA 4 cut(s) 651, 1312, 1404, 1799
TspGWI ACGGA 1 cut(s) 402
TspRI CASTG 6 cut(s) 169, 211, 753, 1386, 1477, 1509
Tth111I GACNNNGTC 1 cut(s) 1504
Van91I CCANNNNNTGG 1 cut(s) 1145
VpaK11BI GGWCC 1 cut(s) 753
XagI CCTNNNNNAGG 1 cut(s) 790
XapI RAATTY 3 cut(s) 1105, 1134, 1234
XbaI TCTAGA 1 cut(s) 1075
XceI RCATGY 5 cut(s) 49, 475, 1678, 1865, 1869
XcmI CCANNNNNNNNNTGG 2 cut(s) 786, 1398
XmnI GAANNNNTTC 1 cut(s) 1411
XspI CTAG 7 cut(s) 212, 249, 659, 965, 996, 1076, 1841
ZrmI AGTACT 2 cut(s) 1249, 1597
Zsp2I ATGCAT 3 cut(s) 148, 1265, 1867
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.