RchiOBHm_Chr5g0011331

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
7529417 .. 7530315
899 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ29202

Sequence Viewer

Length: 810 bp
ATGCACAAGTGGCTTTACTTCCACACCATAAAGGTTTTTAATTTAGAAACAAAAGGGGCTTTCACAAGTTTTGATGTTGAATGTGACATGCTAAGCAATATTCGTCACCGAAATCTTATCAAAGTCATCAGCTGCTGCAATCAAAATGATTTCAAAGCTCTTATACTGAATTACATGCCTAATGGGAACCTGGAGAAGTGGTTATATTCACAGAACTATTCTTTGAACATGCTGCAGAGGTTGGATATAATGATAAATGTTGCATCAGCTTTGGAGTATCTTCATCACGATTATGAAACACCTATTGTCCATTGTGACTTGAAGCCCAGCAACATATTACTAGATGATGATATGGTTGCACATGTTGCTGACTTTGGCATAGCAAAACTATTAGGCGGAGGAGATTCTATGACTCAAACAATGACGCTAGCGACAATTGGGTATATGGCTCCAGAGTACGGAACGGAAGGGATTGTCACTAGAAGAGGGGATGTGTATAGTTTTGGCATTGTATTGATGGAAACATTCACAAGAAGGAAGCCAACTGATGAGATGTTCGTTGGGGAAATGAGTTTAAAGCAATGGGTTGCAAATTCACTATTTGCAGATGCAATAGTTGAAGTTGTTGATACTAATTTACTTGGGACACAGAAAGATCCTAAATTTGTGAGCTATAATGTTTGCTTCTCATCCATTATGAGATTAGGTGTTGCTTGTTGTGTAGAGTCACCAAAAGAGAGGATAACTATGCAAGAGGCTGTAGCCACGCTGAACAAAATCAAGATCGAGTATGTGAAGGAGGTGTGGTGA

Protein Analysis

269

Amino Acids

30.66

Weight (kDa)

5.51

Isoelectric Point (pI)

34.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 10 - 255 1.2e-36 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 10 - 255 8.8e-36 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 396
AclWI GGATC 1 cut(s) 650
AcsI RAATTY 2 cut(s) 592, 662
AfaI GTAC 1 cut(s) 458
AfiI CCNNNNNNNGG 1 cut(s) 458
AflIII ACRYGT 1 cut(s) 361
AgsI TTSAA 5 cut(s) 80, 154, 226, 322, 620
AjnI CCWGG 1 cut(s) 189
AluBI AGCT 4 cut(s) 132, 158, 269, 672
AluI AGCT 4 cut(s) 132, 158, 269, 672
AlwI GGATC 1 cut(s) 650
AlwNI CAGNNNCTG 1 cut(s) 135
ApeKI GCWGC 3 cut(s) 132, 135, 232
ApoI RAATTY 2 cut(s) 592, 662
AsuHPI GGTGA 2 cut(s) 98, 720
AsuNHI GCTAGC 1 cut(s) 427
BbvI GCAGC 3 cut(s) 119, 122, 219
BccI CCATC 1 cut(s) 511
BciT130I CCWGG 1 cut(s) 191
BfaI CTAG 3 cut(s) 341, 428, 480
BfmI CTRYAG 2 cut(s) 233, 759
BisI GCNGC 3 cut(s) 133, 136, 233
BlpI GCTNAGC 1 cut(s) 92
BlsI GCNGC 3 cut(s) 134, 137, 234
Bme1390I CCNGG 1 cut(s) 191
BmiI GGNNCC 2 cut(s) 188, 450
BmrFI CCNGG 1 cut(s) 191
BmsI GCATC 2 cut(s) 272, 598
BmtI GCTAGC 1 cut(s) 431
BpmI CTGGAG 2 cut(s) 212, 435
Bpu1102I GCTNAGC 1 cut(s) 92
BsaXI ACNNNNNCTCC 3 cut(s) 185, 215, 791
Bsc4I CCNNNNNNNGG 1 cut(s) 458
Bse3DI GCAATG 1 cut(s) 587
BseBI CCWGG 1 cut(s) 191
BseGI GGATG 2 cut(s) 496, 689
BseLI CCNNNNNNNGG 1 cut(s) 458
BseMI GCAATG 1 cut(s) 587
BseRI GAGGAG 1 cut(s) 414
BseXI GCAGC 3 cut(s) 119, 122, 219
BseYI CCCAGC 1 cut(s) 326
BslFI GGGAC 1 cut(s) 658
BslI CCNNNNNNNGG 1 cut(s) 458
BsmFI GGGAC 1 cut(s) 658
Bsp143I GATC 2 cut(s) 655, 783
Bsp1720I GCTNAGC 1 cut(s) 92
BspACI CCGC 1 cut(s) 396
BspLI GGNNCC 2 cut(s) 188, 450
BspMAI CTGCAG 1 cut(s) 237
BspOI GCTAGC 1 cut(s) 431
BspPI GGATC 1 cut(s) 650
BsrDI GCAATG 1 cut(s) 587
BssMI GATC 2 cut(s) 655, 783
Bst2UI CCWGG 1 cut(s) 191
Bst6I CTCTTC 1 cut(s) 478
BstAPI GCANNNNNTGC 1 cut(s) 365
BstC8I GCNNGC 1 cut(s) 429
BstDEI CTNAG 1 cut(s) 92
BstF5I GGATG 2 cut(s) 496, 689
BstKTI GATC 2 cut(s) 658, 786
BstMBI GATC 2 cut(s) 655, 783
BstMWI GCNNNNNNNGC 2 cut(s) 10, 365
BstNI CCWGG 1 cut(s) 191
BstNSI RCATGY 4 cut(s) 91, 178, 232, 365
BstSCI CCNGG 1 cut(s) 189
BstSFI CTRYAG 2 cut(s) 233, 759
BstV1I GCAGC 3 cut(s) 119, 122, 219
BstX2I RGATCY 1 cut(s) 655
BstYI RGATCY 1 cut(s) 655
BtsCI GGATG 2 cut(s) 496, 689
Cac8I GCNNGC 1 cut(s) 429
CaiI CAGNNNCTG 1 cut(s) 135
CseI GACGC 1 cut(s) 433
Csp6I GTAC 1 cut(s) 457
CviAII CATG 4 cut(s) 88, 175, 229, 362
CviQI GTAC 1 cut(s) 457
DdeI CTNAG 1 cut(s) 92
DpnI GATC 2 cut(s) 657, 785
DpnII GATC 2 cut(s) 655, 783
DraI TTTAAA 1 cut(s) 576
Eam1104I CTCTTC 1 cut(s) 478
EarI CTCTTC 1 cut(s) 478
EciI GGCGGA 1 cut(s) 411
EcoRII CCWGG 1 cut(s) 189
FaeI CATG 4 cut(s) 91, 178, 232, 365
FaqI GGGAC 1 cut(s) 658
FatI CATG 4 cut(s) 87, 174, 228, 361
Fnu4HI GCNGC 3 cut(s) 133, 136, 233
FokI GGATG 2 cut(s) 503, 676
Fsp4HI GCNGC 3 cut(s) 133, 136, 233
FspBI CTAG 3 cut(s) 341, 428, 480
GluI GCNGC 3 cut(s) 133, 136, 233
GsaI CCCAGC 1 cut(s) 330
GsuI CTGGAG 2 cut(s) 212, 435
HgaI GACGC 1 cut(s) 433
Hin1II CATG 4 cut(s) 91, 178, 232, 365
HinfI GANTC 3 cut(s) 404, 412, 725
HphI GGTGA 2 cut(s) 98, 720
Hpy188III TCNNGA 3 cut(s) 287, 452, 781
HpyAV CCTTC 3 cut(s) 461, 528, 790
HpyCH4V TGCA 9 cut(s) 4, 138, 235, 263, 359, 590, 605, 611, 751
HpyF10VI GCNNNNNNNGC 2 cut(s) 10, 365
HpyF3I CTNAG 1 cut(s) 92
Hsp92II CATG 4 cut(s) 91, 178, 232, 365
Kzo9I GATC 2 cut(s) 655, 783
LmnI GCTCC 1 cut(s) 454
LpnPI CCDG 4 cut(s) 176, 203, 340, 465
Lsp1109I GCAGC 3 cut(s) 119, 122, 219
LweI GCATC 2 cut(s) 272, 598
MaeI CTAG 3 cut(s) 341, 428, 480
MaeIII GTNAC 5 cut(s) 83, 104, 314, 475, 726
MalI GATC 2 cut(s) 657, 785
MboI GATC 2 cut(s) 655, 783
MboII GAAGA 2 cut(s) 272, 495
MfeI CAATTG 1 cut(s) 435
MflI RGATCY 1 cut(s) 655
MluCI AATT 6 cut(s) 40, 169, 435, 592, 634, 662
MlyI GAGTC 2 cut(s) 406, 734
MmeI TCCRAC 1 cut(s) 222
MnlI CCTC 6 cut(s) 231, 392, 479, 732, 748, 793
MseI TTAA 2 cut(s) 39, 575
MslI CAYNNNNRTG 1 cut(s) 291
MspA1I CMGCKG 1 cut(s) 132
MspR9I CCNGG 1 cut(s) 191
MunI CAATTG 1 cut(s) 435
MvaI CCWGG 1 cut(s) 191
MwoI GCNNNNNNNGC 2 cut(s) 10, 365
NdeII GATC 2 cut(s) 655, 783
NheI GCTAGC 1 cut(s) 427
NlaIII CATG 4 cut(s) 91, 178, 232, 365
NlaIV GGNNCC 2 cut(s) 188, 450
NmuCI GTSAC 5 cut(s) 83, 104, 314, 475, 726
NspI RCATGY 4 cut(s) 91, 178, 232, 365
PciI ACATGT 1 cut(s) 361
PfeI GAWTC 1 cut(s) 404
PkrI GCNGC 3 cut(s) 134, 137, 234
PleI GAGTC 2 cut(s) 406, 733
PpsI GAGTC 2 cut(s) 406, 733
PscI ACATGT 1 cut(s) 361
Psp6I CCWGG 1 cut(s) 189
PspFI CCCAGC 1 cut(s) 326
PspGI CCWGG 1 cut(s) 189
PspN4I GGNNCC 2 cut(s) 188, 450
PstI CTGCAG 1 cut(s) 237
PstNI CAGNNNCTG 1 cut(s) 135
PsuI RGATCY 1 cut(s) 655
PvuII CAGCTG 1 cut(s) 132
RsaI GTAC 1 cut(s) 458
RsaNI GTAC 1 cut(s) 457
RseI CAYNNNNRTG 1 cut(s) 291
SaqAI TTAA 2 cut(s) 39, 575
SatI GCNGC 3 cut(s) 133, 136, 233
Sau3AI GATC 2 cut(s) 655, 783
SchI GAGTC 2 cut(s) 406, 734
ScrFI CCNGG 1 cut(s) 191
SfaNI GCATC 2 cut(s) 272, 598
SfcI CTRYAG 2 cut(s) 233, 759
SmiMI CAYNNNNRTG 1 cut(s) 291
Sse9I AATT 6 cut(s) 40, 169, 435, 592, 634, 662
SsiI CCGC 1 cut(s) 396
SspI AATATT 1 cut(s) 100
SspMI CTAG 3 cut(s) 341, 428, 480
StyD4I CCNGG 1 cut(s) 189
TaqI TCGA 1 cut(s) 786
TasI AATT 6 cut(s) 40, 169, 435, 592, 634, 662
TfiI GAWTC 1 cut(s) 404
Tru1I TTAA 2 cut(s) 39, 575
Tru9I TTAA 2 cut(s) 39, 575
TseFI GTSAC 5 cut(s) 83, 104, 314, 475, 726
TseI GCWGC 3 cut(s) 132, 135, 232
Tsp45I GTSAC 5 cut(s) 83, 104, 314, 475, 726
TspDTI ATGAA 2 cut(s) 272, 309
TspGWI ACGGA 2 cut(s) 474, 479
XapI RAATTY 2 cut(s) 592, 662
XceI RCATGY 4 cut(s) 91, 178, 232, 365
XspI CTAG 3 cut(s) 341, 428, 480
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.