Rroxscaffold_5G00347770

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Forward (+)
19328900 .. 19333166
4267 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00347770.1

Sequence Viewer

Length: 3138 bp
ATGGGAAACCCACGAATGCTAATCCCATTTGGACTACTAGTGTTACTTCTCCACTCATTCTTCCTTCAACCAGCCACCACCACCTCCTCCTCCAACTTCACCGATCAATCTGCTCTCCTTGCCATTCAATCCAAACTCACTTTTGATCCTACCGAAACTGTCTTGGGTGGTAATTGGAGTACCAACACAAGCTTCTGTGATTGGATTGGGGTCTCATGCAGTAAACGAAGGCAAAGAGTCACCGCCTTGGACTTGTCATCTATGGGTCTTGAAGGCCCCATTGCACCTCATGTTGGCAACCTCTCCTTTCTGGTCATATTGGTTCTTCAATACAACAGCTTGTCTGGGTTTGTGCCAAATGAAATCAGCCATTTACACCGCTTGAAGGTACTTGTACTGGAAGGGAACCAGTTGGAAGGGCACATCCCTGCAACTTTATATCATTGCCAAAAGCTCGAAATCATTGCCCTTGCAGAAAACAAGCTTACCGGTCGTATACCTGAAGAGTTGGGTTTCTTACCCAAACTTCAGAAATTATATCTCGGTTTAAACAATCTCACGGCTGGTGAAATTCCAGCATCTTTGGGGAACGTTTCAACATTACAAGAATTTAGTGTGGCAAAAAGTGGCCTCACAGGTTCACTCCCTTCCACTCTACTTAACCTATCTTCTCTAGTTGTTATTTCACTATATACAAATAACATTTCAGGAGTTCTTCCTGAGGATCTTTGCCATTACTGGCCTAATATTCAACACATTGATTTATCTGGAAACAAACTTGGCGGCCAACTCTCTTCGAGATTTGATAAATGCAGTAACATTCAGGAGCTATCTCTGTCATACAATAGGTTTGTCGGAACTATTCCAAAAGACCTTGCAAGTTTACAGCATCTTGAAGTGCTCTACCTCGGTGGTAATGGCTTAACCGGTACTGTACCACCTGTCCTAGGTAACTTGTCGAACTTGCAAAAGTTTGCTGTACAACGTAATAACATCAAAGGAAGTATTCCCAGAGAGTTGGGCCTTCTTTCTAATTTAATTTTCCTCTCATTAGCTACCAATAGCCTAACAGGACTCAGTACCAATTTACTCTATGGACCAATTCCCGTGAATCTTGGTAGCCTAAAACACCTCCAGTACCTTGATTTGGCAAGAAATCAGTTGACTGGAGAACCTGGAGTTCCTGAACTTAAATTCCTTTCCTCATTATTCAATTCCACTTCGCTGCGAGAGTTGGTTCTGACTGAAAATCCTCTAAATGGCATCATACCCAATTCCTTTGGAAATTTTTCTTCCCTTCAGCACATTTCAGCAATTTCGTGCCAGATAAAGGGTCACATTCCCACAAAAATTCTTTCCTTGAAAAGTTTAATCTACCTTAAATTTGTGGACAACAATATAAGTGGAAAAATACCACCACAGATTGGAGGACTGGAGAGGTTACAAAGGTTGTATCTGAGCTTCAACAGAATTGAAGGATCCATTCCATATGAGATCTGTCATCTGCAGAACCTAGGAGAACTATCACTAGAGAATAACAAAATCTCTGGATTGATCCCAAATTGCATTGGAAACCTCAGCCGCACCCTTCAAATATTTCTCCTAAATTCCAACCAAATGACATCCTTGATACCAATGAATTTATTATGGAACCTTGAAAATCTCTTGGTGTTAAATTTGTCATCCAATTCCTTCAGTGGAGACATACCTACCACCTTGACAAAGTCGATTTCCATTGAAGTGATTGATTTATCTCATAACCAAATTACTGGTAATATTTCAAGCATCATAGTAGCATCCCAAAGCGTAGCTTACCTTGATTTGTCAAAGAACTGGTTTATAGGATCCATTCCACCGAGCTGTGGTGATCTGAAAGGGTTAGAGTATCTGGACCTATCATACAATAACCTGTCTGGTGCAATACCAAAATCTCTTGAAACACTCAAATATCTCCAGTATTTGAACCTCTCTTTCAATAATCTCTTTGGAGAGATTCCTTCTCGTGGGCCTTTTGTAAACTTTAGTTCCCGATCATTTTTGGAGAACAAAGCACTTTGTGGGAGACCAAAGTATGGAGTTCCACCTTGTATGACTCAAAAAACAAAAACGACACATCCTGTGCTCACATATGTTCTTCCTAGCATTGCATCGACAGTGATTCTGATAGCCCTCATTTACATGATCACATGGTATAGAAAAAGAAAGAGAGGCAAGAGTACAACAGTTGAACAGCTAACAACAGTGGAGCATAGTAGGATATCATATCAAGAACTCCGTCGCGCTACAAATGAGTTTTGTGAAAGCAACTTTCTTGGAGGGGGAAGTTTTGGCTCGGTGTACAAGGGGATACTGTCTAATGGGACTACTATTGCTGTCAAAATTCTTAAACTGGAAATGGAGGGTGCTGTAAAAAGTTTTGATGCAGAATGCAAGGTGTGGCGAACAATCCGTCATAGGAATCTTGTAAAGGTTATAACTACATGTTCTAGCCCTGAGGTCAGAGCTTTGGTGCTGCAGTACATGTCTAATGGCAGTCTTGAGAAGTGGTTATACTCTCACAACTACTGTCTCAGTATTCTGCAAAGAGTGAGTATGTTGATTGATATTGCATCTGCTTTGGAATATCTCCATCATGGTCAAGCAGAAGCAGTGGTGCACTGTGATGTGAAGCCTGGGAATATCCTTCTTGATGAAGACATGGTTGCACATGTTGCAGACTTCGGTCTTGCAAAAATTTTAGCAAAAAACAAAGAGGAAACACAGACAAGAACCATAGGCACTCTGGGATACGTAGCACCAGAGTATGGTTCCGCAGGAAAAGTGTCCAAAAAGGGTGATGTCTATAGCTTTGGGATAATGCTGCTGGAAATAATGGCGAGAAAGAAACCCACTGATGAAATGTTTGCCGGAGAAGTGACTTTGAGGCAATGGATAAATGTATCTGTCCCTGATTATGTTCTGAAAGTGGTGGATGCTGGCTTATTGAGCATAGAAGAGGAAAGAGACATGAATGCCACAGAAAGTATCCTAGTGTCCATCCTGGAAATAGGCTTGAGGTGTTCGGAAGAAGCAGCAGAGGATAGAATGGATATTAAGGATGTGCTGCTCTTGAGATCTGCCCACCAAGGTTCAAATTGA

Protein Analysis

1045

Amino Acids

114.97

Weight (kDa)

7.8

Isoelectric Point (pI)

39.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 440 - 577 3.8e-09 Leucine-rich repeat region
LRR_8 PF13855 602 - 661 4e-10 Leucine rich repeat
Pkinase PF00069 769 - 965 9.9e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 770 - 1033 6e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2474
AccB7I CCANNNNNTGG 3 cut(s) 1424, 2072, 2804
AccI GTMKAC 1 cut(s) 496
AccII CGCG 1 cut(s) 2280
AciI CCGC 5 cut(s) 243, 379, 783, 1582, 2811
AclI AACGTT 1 cut(s) 591
AclWI GGATC 7 cut(s) 140, 732, 1473, 1486, 1549, 1839, 1852
AcoI YGGCCR 1 cut(s) 784
AcuI CTGAAG 4 cut(s) 512, 522, 1283, 1678
AdeI CACNNNGTG 1 cut(s) 2057
AflIII ACRYGT 3 cut(s) 2480, 2520, 2707
AgeI ACCGGT 2 cut(s) 488, 926
AhlI ACTAGT 1 cut(s) 37
AjnI CCWGG 3 cut(s) 1174, 2671, 3039
AjuI GAANNNNNNNTTGG 2 cut(s) 176, 208
AloI GAACNNNNNNTCC 2 cut(s) 1179, 1211
Alw21I GWGCWC 3 cut(s) 903, 2124, 2658
Alw26I GTCTC 5 cut(s) 217, 1695, 2056, 2573, 2997
Alw44I GTGCAC 1 cut(s) 2654
AlwI GGATC 7 cut(s) 140, 732, 1473, 1486, 1549, 1839, 1852
AoxI GGCC 6 cut(s) 274, 628, 740, 784, 1021, 2006
ApaLI GTGCAC 1 cut(s) 2654
ApeKI GCWGC 5 cut(s) 1225, 2512, 2860, 3071, 3103
ArsI GACNNNNNNTTYG 2 cut(s) 2434, 2466
AsiGI ACCGGT 2 cut(s) 488, 926
Asp700I GAANNNNTTC 1 cut(s) 1288
AspA2I CCTAGG 2 cut(s) 946, 1513
AspLEI GCGC 1 cut(s) 2282
AspS9I GGNCC 5 cut(s) 275, 1021, 1097, 1891, 2006
AsuHPI GGTGA 5 cut(s) 91, 232, 578, 1877, 2846
AvaII GGWCC 2 cut(s) 1097, 1891
AvrII CCTAGG 2 cut(s) 946, 1513
AxyI CCTNAGG 2 cut(s) 720, 2493
BaeGI GKGCMC 2 cut(s) 423, 2658
BamHI GGATCC 2 cut(s) 1478, 1844
BarI GAAGNNNNNNTAC 4 cut(s) 1445, 1477, 2534, 2566
BauI CACGAG 1 cut(s) 2001
BbsI GAAGAC 1 cut(s) 2700
Bbv12I GWGCWC 3 cut(s) 903, 2124, 2658
BbvCI CCTCAGC 1 cut(s) 1577
BbvI GCAGC 5 cut(s) 1212, 2499, 2847, 3083, 3090
BccI CCATC 2 cut(s) 2637, 3044
BceAI ACGGC 1 cut(s) 576
BcgI CGANNNNNNTGC 4 cut(s) 92, 126, 446, 480
BciT130I CCWGG 3 cut(s) 1176, 2673, 3041
BciVI GTATCC 3 cut(s) 2340, 2780, 3035
BclI TGATCA 1 cut(s) 2181
BcoDI GTCTC 5 cut(s) 217, 1695, 2056, 2573, 2997
BcuI ACTAGT 1 cut(s) 37
BfaI CTAG 8 cut(s) 38, 674, 947, 1514, 1529, 2139, 2487, 3029
BfmI CTRYAG 3 cut(s) 1505, 2513, 2842
BfuI GTATCC 3 cut(s) 2340, 2780, 3035
BglII AGATCT 2 cut(s) 1494, 3113
BisI GCNGC 7 cut(s) 784, 1226, 1582, 2513, 2861, 3072, 3104
BlnI CCTAGG 2 cut(s) 946, 1513
BlsI GCNGC 7 cut(s) 785, 1227, 1583, 2514, 2862, 3073, 3105
Bme1390I CCNGG 3 cut(s) 1176, 2673, 3041
Bme18I GGWCC 2 cut(s) 1097, 1891
BmgT120I GGNCC 5 cut(s) 275, 1021, 1097, 1891, 2006
BmiI GGNNCC 6 cut(s) 277, 407, 1480, 1652, 1846, 2809
BmrFI CCNGG 3 cut(s) 1176, 2673, 3041
BmsI GCATC 9 cut(s) 587, 898, 1272, 1794, 1805, 2156, 2410, 2618, 2962
BoxI GACNNNNGTC 1 cut(s) 2721
BpiI GAAGAC 1 cut(s) 2700
BpmI CTGGAG 5 cut(s) 1118, 1188, 1197, 1454, 1937
Bpu10I CCTNAGC 1 cut(s) 1577
BpuEI CTTGAG 3 cut(s) 2558, 3073, 3130
BsaAI YACGTR 1 cut(s) 2791
BsaI GGTCTC 2 cut(s) 217, 2056
BsaJI CCNNGG 6 cut(s) 246, 907, 946, 1513, 2672, 3124
BsaWI WCCGGW 2 cut(s) 488, 926
Bse118I RCCGGY 2 cut(s) 488, 926
Bse21I CCTNAGG 2 cut(s) 720, 2493
Bse3DI GCAATG 5 cut(s) 279, 442, 462, 2142, 2933
BseBI CCWGG 3 cut(s) 1176, 2673, 3041
BseDI CCNNGG 6 cut(s) 246, 907, 946, 1513, 2672, 3124
BseGI GGATG 8 cut(s) 423, 1622, 1682, 1796, 2113, 2977, 3036, 3103
BseMI GCAATG 5 cut(s) 279, 442, 462, 2142, 2933
BseMII CTCAG 6 cut(s) 711, 1090, 1448, 1591, 2484, 2584
BseRI GAGGAG 2 cut(s) 76, 79
BseSI GKGCMC 2 cut(s) 423, 2658
BseXI GCAGC 5 cut(s) 1212, 2499, 2847, 3083, 3090
Bsh1236I CGCG 1 cut(s) 2280
Bsh1285I CGRYCG 1 cut(s) 493
BshFI GGCC 6 cut(s) 276, 630, 742, 786, 1023, 2008
BshTI ACCGGT 2 cut(s) 488, 926
BsiEI CGRYCG 1 cut(s) 493
BsiHKAI GWGCWC 3 cut(s) 903, 2124, 2658
BsiSI CCGG 3 cut(s) 489, 927, 2907
BslFI GGGAC 2 cut(s) 2374, 2930
BsmAI GTCTC 5 cut(s) 217, 1695, 2056, 2573, 2997
BsmFI GGGAC 2 cut(s) 2374, 2930
BsmI GAATGC 3 cut(s) 21, 2432, 3016
BsnI GGCC 6 cut(s) 276, 630, 742, 786, 1023, 2008
Bso31I GGTCTC 2 cut(s) 217, 2056
Bsp1286I GDGCHC 4 cut(s) 423, 903, 2124, 2658
Bsp1407I TGTACA 2 cut(s) 979, 2337
BspACI CCGC 5 cut(s) 243, 379, 783, 1582, 2811
BspANI GGCC 6 cut(s) 276, 630, 742, 786, 1023, 2008
BspCNI CTCAG 6 cut(s) 712, 1089, 1449, 1590, 2485, 2583
BspFNI CGCG 1 cut(s) 2280
BspLI GGNNCC 6 cut(s) 277, 407, 1480, 1652, 1846, 2809
BspMAI CTGCAG 2 cut(s) 1509, 2517
BspPI GGATC 7 cut(s) 140, 732, 1473, 1486, 1549, 1839, 1852
BspTNI GGTCTC 2 cut(s) 217, 2056
BsrDI GCAATG 5 cut(s) 279, 442, 462, 2142, 2933
BsrFI RCCGGY 2 cut(s) 488, 926
BsrGI TGTACA 2 cut(s) 979, 2337
BssAI RCCGGY 2 cut(s) 488, 926
BssECI CCNNGG 6 cut(s) 246, 907, 946, 1513, 2672, 3124
BssNAI GTATAC 1 cut(s) 497
BssSI CACGAG 1 cut(s) 2001
BssT1I CCWWGG 4 cut(s) 246, 946, 1513, 3124
Bst1107I GTATAC 1 cut(s) 497
Bst2BI CACGAG 1 cut(s) 2001
Bst2UI CCWGG 3 cut(s) 1176, 2673, 3041
Bst4CI ACNGT 8 cut(s) 160, 934, 2155, 2224, 2242, 2352, 2567, 2660
Bst6I CTCTTC 3 cut(s) 498, 799, 2988
BstAPI GCANNNNNTGC 1 cut(s) 2711
BstAUI TGTACA 2 cut(s) 979, 2337
BstBAI YACGTR 1 cut(s) 2791
BstC8I GCNNGC 1 cut(s) 2977
BstDEI CTNAG 6 cut(s) 720, 1076, 1457, 1577, 2493, 2570
BstENI CCTNNNNNAGG 1 cut(s) 945
BstF5I GGATG 8 cut(s) 423, 1622, 1682, 1796, 2113, 2977, 3036, 3103
BstFNI CGCG 1 cut(s) 2280
BstHHI GCGC 1 cut(s) 2282
BstMAI GTCTC 5 cut(s) 217, 1695, 2056, 2573, 2997
BstMCI CGRYCG 1 cut(s) 493
BstMWI GCNNNNNNNGC 3 cut(s) 119, 2711, 2985
BstNI CCWGG 3 cut(s) 1176, 2673, 3041
BstNSI RCATGY 3 cut(s) 2484, 2524, 2711
BstPAI GACNNNNGTC 1 cut(s) 2721
BstSCI CCNGG 3 cut(s) 1174, 2671, 3039
BstSFI CTRYAG 3 cut(s) 1505, 2513, 2842
BstSLI GKGCMC 2 cut(s) 423, 2658
BstSNI TACGTA 1 cut(s) 2791
BstUI CGCG 1 cut(s) 2280
BstV1I GCAGC 5 cut(s) 1212, 2499, 2847, 3083, 3090
BstV2I GAAGAC 1 cut(s) 2700
BstX2I RGATCY 5 cut(s) 724, 1478, 1494, 1844, 3113
BstXI CCANNNNNNTGG 2 cut(s) 1018, 1769
BstYI RGATCY 5 cut(s) 724, 1478, 1494, 1844, 3113
BstZ17I GTATAC 1 cut(s) 497
Bsu36I CCTNAGG 2 cut(s) 720, 2493
BsuI GTATCC 3 cut(s) 2340, 2780, 3035
BsuRI GGCC 6 cut(s) 276, 630, 742, 786, 1023, 2008
BtsCI GGATG 8 cut(s) 423, 1622, 1682, 1796, 2113, 2977, 3036, 3103
BtsI GCAGTG 1 cut(s) 2655
BtsIMutI CAGTG 6 cut(s) 1702, 2160, 2247, 2655, 2656, 2889
Cac8I GCNNGC 1 cut(s) 2977
CfoI GCGC 1 cut(s) 2282
Cfr10I RCCGGY 2 cut(s) 488, 926
Cfr13I GGNCC 5 cut(s) 275, 1021, 1097, 1891, 2006
CspAI ACCGGT 2 cut(s) 488, 926
CspCI CAANNNNNGTGG 2 cut(s) 1384, 1419
DdeI CTNAG 6 cut(s) 720, 1076, 1457, 1577, 2493, 2570
DraI TTTAAA 1 cut(s) 549
DraIII CACNNNGTG 1 cut(s) 2057
EaeI YGGCCR 1 cut(s) 784
Eam1104I CTCTTC 3 cut(s) 498, 799, 2988
EarI CTCTTC 3 cut(s) 498, 799, 2988
Eco105I TACGTA 1 cut(s) 2791
Eco130I CCWWGG 4 cut(s) 246, 946, 1513, 3124
Eco31I GGTCTC 2 cut(s) 217, 2056
Eco32I GATATC 1 cut(s) 2259
Eco47I GGWCC 2 cut(s) 1097, 1891
Eco57I CTGAAG 4 cut(s) 512, 522, 1283, 1678
Eco81I CCTNAGG 2 cut(s) 720, 2493
EcoNI CCTNNNNNAGG 1 cut(s) 945
EcoO109I RGGNCCY 1 cut(s) 275
EcoRII CCWGG 3 cut(s) 1174, 2671, 3039
EcoRV GATATC 1 cut(s) 2259
EcoT14I CCWWGG 4 cut(s) 246, 946, 1513, 3124
ErhI CCWWGG 4 cut(s) 246, 946, 1513, 3124
FalI AAGNNNNNCTT 2 cut(s) 1795, 1827
FaqI GGGAC 2 cut(s) 2374, 2930
FauNDI CATATG 2 cut(s) 1489, 2128
FbaI TGATCA 1 cut(s) 2181
FblI GTMKAC 1 cut(s) 496
Fnu4HI GCNGC 7 cut(s) 784, 1226, 1582, 2513, 2861, 3072, 3104
FokI GGATG 8 cut(s) 410, 1609, 1669, 1783, 2100, 2984, 3023, 3110
Fsp4HI GCNGC 7 cut(s) 784, 1226, 1582, 2513, 2861, 3072, 3104
FspBI CTAG 8 cut(s) 38, 674, 947, 1514, 1529, 2139, 2487, 3029
GlaI GCGC 1 cut(s) 2281
GluI GCNGC 7 cut(s) 784, 1226, 1582, 2513, 2861, 3072, 3104
GsuI CTGGAG 5 cut(s) 1118, 1188, 1197, 1454, 1937
HaeIII GGCC 6 cut(s) 276, 630, 742, 786, 1023, 2008
HapII CCGG 3 cut(s) 489, 927, 2907
HhaI GCGC 1 cut(s) 2282
Hin6I GCGC 1 cut(s) 2280
HinP1I GCGC 1 cut(s) 2280
HincII GTYRAC 1 cut(s) 1164
HindII GTYRAC 1 cut(s) 1164
HindIII AAGCTT 2 cut(s) 190, 482
HinfI GANTC 7 cut(s) 237, 1074, 1111, 1993, 2092, 2158, 2458
HpaII CCGG 3 cut(s) 489, 927, 2907
HphI GGTGA 5 cut(s) 91, 232, 578, 1877, 2846
Hpy166II GTNNAC 9 cut(s) 224, 497, 641, 884, 1164, 1390, 2017, 2338, 2656
Hpy188I TCNGA 9 cut(s) 531, 857, 1242, 1458, 1872, 2163, 2501, 2961, 3064
Hpy8I GTNNAC 9 cut(s) 224, 497, 641, 884, 1164, 1390, 2017, 2338, 2656
Hpy99I CGWCG 1 cut(s) 2280
HpyCH4III ACNGT 8 cut(s) 160, 934, 2155, 2224, 2242, 2352, 2567, 2660
HpyCH4IV ACGT 3 cut(s) 591, 985, 2790
HpyF10VI GCNNNNNNNGC 3 cut(s) 119, 2711, 2985
HpyF3I CTNAG 6 cut(s) 720, 1076, 1457, 1577, 2493, 2570
HpySE526I ACGT 3 cut(s) 591, 985, 2790
HspAI GCGC 1 cut(s) 2280
Ksp22I TGATCA 1 cut(s) 2181
LmnI GCTCC 2 cut(s) 826, 2245
Lsp1109I GCAGC 5 cut(s) 1212, 2499, 2847, 3083, 3090
LweI GCATC 9 cut(s) 587, 898, 1272, 1794, 1805, 2156, 2410, 2618, 2962
MaeI CTAG 8 cut(s) 38, 674, 947, 1514, 1529, 2139, 2487, 3029
MaeII ACGT 3 cut(s) 591, 985, 2790
MaeIII GTNAC 7 cut(s) 42, 238, 815, 950, 1334, 1440, 2914
MflI RGATCY 5 cut(s) 724, 1478, 1494, 1844, 3113
MhlI GDGCHC 4 cut(s) 423, 903, 2124, 2658
MlyI GAGTC 3 cut(s) 246, 1068, 2086
MmeI TCCRAC 4 cut(s) 117, 393, 835, 1635
MroXI GAANNNNTTC 1 cut(s) 1288
MslI CAYNNNNRTG 3 cut(s) 1739, 2177, 2661
MspI CCGG 3 cut(s) 489, 927, 2907
MspR9I CCNGG 3 cut(s) 1176, 2673, 3041
MssI GTTTAAAC 1 cut(s) 549
Mva1269I GAATGC 3 cut(s) 21, 2432, 3016
MvaI CCWGG 3 cut(s) 1176, 2673, 3041
MvnI CGCG 1 cut(s) 2280
MwoI GCNNNNNNNGC 3 cut(s) 119, 2711, 2985
NdeI CATATG 2 cut(s) 1489, 2128
NlaIV GGNNCC 6 cut(s) 277, 407, 1480, 1652, 1846, 2809
NmuCI GTSAC 3 cut(s) 238, 1334, 2914
NspI RCATGY 3 cut(s) 2484, 2524, 2711
PciI ACATGT 3 cut(s) 2480, 2520, 2707
PctI GAATGC 3 cut(s) 21, 2432, 3016
PdmI GAANNNNTTC 1 cut(s) 1288
PfeI GAWTC 4 cut(s) 1111, 1993, 2158, 2458
PflFI GACNNNGTC 1 cut(s) 1723
PflMI CCANNNNNTGG 3 cut(s) 1424, 2072, 2804
PfoI TCCNGGA 1 cut(s) 3039
PinAI ACCGGT 2 cut(s) 488, 926
PkrI GCNGC 7 cut(s) 785, 1227, 1583, 2514, 2862, 3073, 3105
PleI GAGTC 3 cut(s) 245, 1068, 2086
PmeI GTTTAAAC 1 cut(s) 549
PpsI GAGTC 3 cut(s) 245, 1068, 2086
Ppu21I YACGTR 1 cut(s) 2791
PscI ACATGT 3 cut(s) 2480, 2520, 2707
PshAI GACNNNNGTC 1 cut(s) 2721
PsiI TTATAA 1 cut(s) 2474
Psp1406I AACGTT 1 cut(s) 591
Psp6I CCWGG 3 cut(s) 1174, 2671, 3039
PspGI CCWGG 3 cut(s) 1174, 2671, 3039
PspN4I GGNNCC 6 cut(s) 277, 407, 1480, 1652, 1846, 2809
PspPI GGNCC 5 cut(s) 275, 1021, 1097, 1891, 2006
PstI CTGCAG 2 cut(s) 1509, 2517
PsuI RGATCY 5 cut(s) 724, 1478, 1494, 1844, 3113
PsyI GACNNNGTC 1 cut(s) 1723
RseI CAYNNNNRTG 3 cut(s) 1739, 2177, 2661
SatI GCNGC 7 cut(s) 784, 1226, 1582, 2513, 2861, 3072, 3104
Sau96I GGNCC 5 cut(s) 275, 1021, 1097, 1891, 2006
SchI GAGTC 3 cut(s) 246, 1068, 2086
ScrFI CCNGG 3 cut(s) 1176, 2673, 3041
SduI GDGCHC 4 cut(s) 423, 903, 2124, 2658
SfaNI GCATC 9 cut(s) 587, 898, 1272, 1794, 1805, 2156, 2410, 2618, 2962
SfcI CTRYAG 3 cut(s) 1505, 2513, 2842
SinI GGWCC 2 cut(s) 1097, 1891
SmiMI CAYNNNNRTG 3 cut(s) 1739, 2177, 2661
SmoI CTYRAG 3 cut(s) 2537, 3052, 3109
SnaBI TACGTA 1 cut(s) 2791
SpeI ACTAGT 1 cut(s) 37
SsiI CCGC 5 cut(s) 243, 379, 783, 1582, 2811
SspI AATATT 3 cut(s) 748, 1596, 1777
SspMI CTAG 8 cut(s) 38, 674, 947, 1514, 1529, 2139, 2487, 3029
StyD4I CCNGG 3 cut(s) 1174, 2671, 3039
StyI CCWWGG 4 cut(s) 246, 946, 1513, 3124
TaaI ACNGT 8 cut(s) 160, 934, 2155, 2224, 2242, 2352, 2567, 2660
TaiI ACGT 3 cut(s) 594, 988, 2793
TaqI TCGA 5 cut(s) 456, 797, 959, 1727, 2150
TaqII GACCGA 1 cut(s) 2711
TatI WGTACW 5 cut(s) 394, 979, 2216, 2337, 2517
TauI GCSGC 2 cut(s) 786, 1584
TfiI GAWTC 4 cut(s) 1111, 1993, 2158, 2458
TscAI CASTG 6 cut(s) 1702, 2160, 2247, 2655, 2663, 2896
TseFI GTSAC 3 cut(s) 238, 1334, 2914
TseI GCWGC 5 cut(s) 1225, 2512, 2860, 3071, 3103
Tsp45I GTSAC 3 cut(s) 238, 1334, 2914
TspDTI ATGAA 5 cut(s) 375, 1652, 2706, 2910, 3023
TspGWI ACGGA 2 cut(s) 2264, 2438
TspRI CASTG 6 cut(s) 1702, 2160, 2247, 2655, 2663, 2896
Tth111I GACNNNGTC 1 cut(s) 1723
Van91I CCANNNNNTGG 3 cut(s) 1424, 2072, 2804
VneI GTGCAC 1 cut(s) 2654
VpaK11BI GGWCC 2 cut(s) 1097, 1891
XagI CCTNNNNNAGG 1 cut(s) 945
XceI RCATGY 3 cut(s) 2484, 2524, 2711
XcmI CCANNNNNNNNNTGG 1 cut(s) 2779
XmaJI CCTAGG 2 cut(s) 946, 1513
XmiI GTMKAC 1 cut(s) 496
XmnI GAANNNNTTC 1 cut(s) 1288
XspI CTAG 8 cut(s) 38, 674, 947, 1514, 1529, 2139, 2487, 3029
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.