RLG00000031823

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
8508890 .. 8512006
3117 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031823

Sequence Viewer

Length: 2301 bp
ATGCTGAAGCATTTATACCTTGACAATAACAATTTCCGAGAAATTCCGGATGAGATCGGCACTTTACATCAGCTGGATTTGCTGTCTATGCAATACAATGGCCTAAAAGGGCGCGTTCCTTTGGTTTTCTTCAACATGTCTTCTTTGACTATTTTGGGCCTTTCAGGAAACAGTTTCAGTGGTCGTCTTCCTGACAATATATGTCAGAATCTTCCTAGTATTCAAGGGTTGTACTTTTCTATCAACCAGTTTGATGGTCCACTTCCATCCCAATTATGGCAGTGCAAACAGCTTCTTGTGTTGTCATTATCTGTTAACAATTTCAGTGGAAGTATACCCAGAAATATTGGCAACTTGACCCAGTTACAGAAGATTTATCTAGGCTTCAACAATTTGACAGGTACTGTTCCGCATGAGATTGGCTATCTTCAAAATTTAGAGATATTGTCACTCCTTGCTAACTCATTTTCTGGGTCCATTCCTACCACACTCTGTGCCTTACCAGAACTCCTGTTACTTAACTTGGGCAAGAATAAGTTCACCATTGATACTTCTACCCCGGAAGCCAACATTTTCTCTTGTTTGGCCAATCTTAAAAATTTGTGGATATTAAATTTGTCAAGCAATCCATTATATGCCACACTACCTGTTTCCCTCAAGAATTTCTCTACATCCATTCAATATCTGGATATGAGCAGTTGCAACATAGGAGGTAACATTCCCAACGGTATTGGCAACTTGAGCAGCTTGACAGTCTTAGACTTGGGATACAATCAACTGAGTGGATCAATTCCAACTACAATGGGAAGACTACAGAACCTCCAAGGTTTGTACTTGACTGATAACAAATTGCACGGATTTATTCCGGATGAACTTTGTCAACTAAACAATCTAGTTGACTTAGTTTTGGGTGGTAATCAACTTTCTGGTTCTGTACCTTCCTGCTTGGGTAATCTAACAGCTCTAAGAACCCTGTCATTAGGGTCCAATTCTTTAACTTCAACAGTACCATCTGCAGTGTGGGGACTTACATATATCTTACATATAAACTTGTCATCCAATTCCCTACTTGGTCCTATCTCAGCAGATGTTGGAAATTTAAGAGTTGTCACAAATATAGATTTGTCAAGCAACAACTTTTCAGGTACCATACCAAGCAACATTGGGTGGCTTGAAAACTTGGTTAATCTCTCCTTGGCAAATAACAATCTCGAAGGCCCAATTCCCAGTTCATTTGGCAACTTAGTAAGCCTGGAGCTCTTGGATCTATCCAGAAACAATCTATCTGGAATCATTCCAGAGTCTTTAGAAGCGCTCTTGCATCTCAGGTATCTGAATTTGTCTTTCAACAAACTCCATGGAGAAATTCCAACAGGTGGACCTTTCAAAAACTTCTCTGTGCAGTCATTTCTCTCAAATGATGGACTATGCGGTGCATCCCAGCTTGATTTTCTACCATGCAGAACCCCTGTACAATATTCAAGGATAGCTAGTTCATCTATGTTGAAATATATTATTCCAGGGATGTTGGCAGCAATGCTTGTATTGACCTTCATATGGTTGTTCACAGTACGCAAAAAAGGGGATGCAGAGGTTGCAACAGAGCATACCTTAATACCTGAACTTCTTCGGAACAAAGTTACATACCAAGAAATTCTAAGTGCTACAAATGGCTTCAATGAAACCAACTTACTTGGCTCTGGGGGATTTGGCTCAGTGTATAAAGGAATACTTTCAACTGGGATAGCGGTTGCTATAAAGGTGTTCAATTTACAGGACAAAGAGGCTTTCAAAAAATTTGATGTTGAAAGTGAACTGCTAAGCAATGTTTGTCATCGCAATCTTATCAAAATCATCGGTAGTTGCAACCAAAGTCATTTCAAAGCCTTGGTGCTTGACTACATGCCTAATGGGAGCCTCGAGAGGTTGCTGTATTCTGAAGAATACTGTTCTTTGGAAATCCTAGAGAGGTTGAACATAATGATAGATGTTGCATCGGCGTTGGAATACCTTCATCATGGTTATTCAATACCAGTTGTCCATTGTGATTTGAAGCCAAGCAATATACTACTAGACAATGATATGGTTGCACATGTTGCTGATTTTGGCATTGCAAAACTCTTGGGTGGAGGGGATTCTGTGACCAAAACCCTGACACTAGCTACAGTTGGGTATATGGCTCCAGGTGATGTTGCTACTTTATCTTTCAATTTATGTTTCCACACAAAAACATTATCACTTATCAAGTACTCAGTTATCATTAATTCTGTTCTGATCACATTTAAAATTTCTTATATGTAG

Protein Analysis

767

Amino Acids

83.46

Weight (kDa)

5.85

Isoelectric Point (pI)

34.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 2 - 58 1e-06 Leucine rich repeat
LRR_14 PF23598 2 - 77 5.7e-06 Leucine-rich repeat region
LRR_14 PF23598 90 - 208 3e-09 Leucine-rich repeat region
LRR_14 PF23598 197 - 329 3.8e-11 Leucine-rich repeat region
LRR_8 PF13855 226 - 284 1.9e-06 Leucine rich repeat
LRR_8 PF13855 249 - 308 5.7e-09 Leucine rich repeat
LRR_14 PF23598 358 - 452 7.5e-08 Leucine-rich repeat region
LRR_8 PF13855 393 - 452 1.8e-10 Leucine rich repeat
Pkinase PF00069 560 - 728 4.3e-33 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 563 - 734 1.7e-28 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1145
AccB1I GGYRCC 1 cut(s) 1145
AccB7I CCANNNNNTGG 1 cut(s) 1376
AccI GTMKAC 1 cut(s) 334
AccII CGCG 1 cut(s) 114
AccIII TCCGGA 2 cut(s) 46, 865
AciI CCGC 3 cut(s) 410, 1431, 1748
AclWI GGATC 2 cut(s) 793, 1272
AcoI YGGCCR 1 cut(s) 585
AcuI CTGAAG 2 cut(s) 26, 1959
AdeI CACNNNGTG 1 cut(s) 494
AfaI GTAC 9 cut(s) 233, 403, 833, 936, 1008, 1147, 1473, 1572, 2249
AfeI AGCGCT 1 cut(s) 1314
AfiI CCNNNNNNNGG 3 cut(s) 276, 1376, 1557
AflIII ACRYGT 2 cut(s) 135, 2092
AjnI CCWGG 3 cut(s) 1251, 1519, 2182
AjuI GAANNNNNNNTTGG 2 cut(s) 1213, 1245
AloI GAACNNNNNNTCC 2 cut(s) 1477, 1509
AluBI AGCT 8 cut(s) 73, 292, 747, 962, 1258, 1444, 1490, 2162
AluI AGCT 8 cut(s) 73, 292, 747, 962, 1258, 1444, 1490, 2162
Alw21I GWGCWC 1 cut(s) 1260
AlwI GGATC 2 cut(s) 793, 1272
AlwNI CAGNNNCTG 1 cut(s) 404
Ama87I CYCGRG 1 cut(s) 1919
Aor13HI TCCGGA 2 cut(s) 46, 865
Aor51HI AGCGCT 1 cut(s) 1314
AoxI GGCC 4 cut(s) 100, 157, 585, 1216
ApeKI GCWGC 2 cut(s) 744, 1532
AseI ATTAAT 1 cut(s) 2262
Asp700I GAANNNNTTC 4 cut(s) 536, 1626, 1732, 2010
Asp718I GGTACC 1 cut(s) 1145
AspLEI GCGC 2 cut(s) 114, 1315
AspS9I GGNCC 7 cut(s) 157, 257, 474, 984, 1073, 1217, 1379
AsuC2I CCSGG 1 cut(s) 560
AsuHPI GGTGA 2 cut(s) 532, 2198
AvaI CYCGRG 1 cut(s) 1919
AvaII GGWCC 5 cut(s) 257, 474, 984, 1073, 1379
BalI TGGCCA 1 cut(s) 587
BanI GGYRCC 1 cut(s) 1145
BanII GRGCYC 1 cut(s) 1260
BarI GAAGNNNNNNTAC 1 cut(s) 31
BbsI GAAGAC 3 cut(s) 132, 179, 814
Bbv12I GWGCWC 1 cut(s) 1260
BbvI GCAGC 2 cut(s) 756, 1544
BccI CCATC 4 cut(s) 248, 274, 1018, 1415
BciT130I CCWGG 3 cut(s) 1253, 1521, 2184
BciVI GTATCC 1 cut(s) 761
BclI TGATCA 1 cut(s) 2274
BcnI CCSGG 1 cut(s) 560
BfaI CTAG 7 cut(s) 216, 380, 893, 1491, 1964, 2072, 2159
BfmI CTRYAG 3 cut(s) 812, 1014, 2163
BfoI RGCGCY 1 cut(s) 1316
BfuI GTATCC 1 cut(s) 761
BisI GCNGC 2 cut(s) 745, 1533
BlpI GCTNAGC 1 cut(s) 1820
BlsI GCNGC 2 cut(s) 746, 1534
BmcAI AGTACT 1 cut(s) 2249
Bme1390I CCNGG 4 cut(s) 560, 1253, 1521, 2184
Bme18I GGWCC 5 cut(s) 257, 474, 984, 1073, 1379
BmeT110I CYCGRG 1 cut(s) 1919
BmgT120I GGNCC 7 cut(s) 157, 257, 474, 984, 1073, 1217, 1379
BmiI GGNNCC 5 cut(s) 475, 985, 1147, 1916, 2181
BmrFI CCNGG 4 cut(s) 560, 1253, 1521, 2184
BmrI ACTGGG 3 cut(s) 355, 1221, 1749
BmsI GCATC 4 cut(s) 1330, 1445, 1576, 2003
BmuI ACTGGG 3 cut(s) 355, 1221, 1749
BpiI GAAGAC 3 cut(s) 132, 179, 814
BpmI CTGGAG 2 cut(s) 1274, 2166
Bpu1102I GCTNAGC 1 cut(s) 1820
BpuEI CTTGAG 2 cut(s) 641, 760
BpuMI CCSGG 1 cut(s) 560
BsaJI CCNNGG 6 cut(s) 558, 823, 1194, 1357, 1520, 1887
BsaWI WCCGGW 2 cut(s) 46, 865
BsaXI ACNNNNNCTCC 4 cut(s) 492, 522, 804, 834
Bsc4I CCNNNNNNNGG 3 cut(s) 276, 1376, 1557
Bse1I ACTGG 5 cut(s) 247, 361, 1227, 1744, 2033
Bse3DI GCAATG 3 cut(s) 1542, 1831, 2109
BseAI TCCGGA 2 cut(s) 46, 865
BseBI CCWGG 3 cut(s) 1253, 1521, 2184
BseDI CCNNGG 6 cut(s) 558, 823, 1194, 1357, 1520, 1887
BseGI GGATG 8 cut(s) 55, 266, 671, 874, 1055, 1436, 1530, 1591
BseLI CCNNNNNNNGG 3 cut(s) 276, 1376, 1557
BseMI GCAATG 3 cut(s) 1542, 1831, 2109
BseMII CTCAG 5 cut(s) 770, 1095, 1339, 1728, 2265
BseNI ACTGG 5 cut(s) 247, 361, 1227, 1744, 2033
BseXI GCAGC 2 cut(s) 756, 1544
BseYI CCCAGC 1 cut(s) 1440
BsgI GTGCAG 1 cut(s) 1421
Bsh1236I CGCG 1 cut(s) 114
BshFI GGCC 4 cut(s) 102, 159, 587, 1218
BshNI GGYRCC 1 cut(s) 1145
BsiHKAI GWGCWC 1 cut(s) 1260
BsiHKCI CYCGRG 1 cut(s) 1919
BsiSI CCGG 3 cut(s) 47, 560, 866
BslFI GGGAC 1 cut(s) 1038
BslI CCNNNNNNNGG 3 cut(s) 276, 1376, 1557
BsmFI GGGAC 1 cut(s) 1038
BsnI GGCC 4 cut(s) 102, 159, 587, 1218
BsoBI CYCGRG 1 cut(s) 1919
Bsp1286I GDGCHC 1 cut(s) 1260
Bsp13I TCCGGA 2 cut(s) 46, 865
Bsp1407I TGTACA 1 cut(s) 1471
Bsp143I GATC 4 cut(s) 54, 785, 1264, 2274
Bsp1720I GCTNAGC 1 cut(s) 1820
Bsp19I CCATGG 1 cut(s) 1357
BspACI CCGC 3 cut(s) 410, 1431, 1748
BspANI GGCC 4 cut(s) 102, 159, 587, 1218
BspCNI CTCAG 5 cut(s) 771, 1094, 1338, 1727, 2264
BspEI TCCGGA 2 cut(s) 46, 865
BspFNI CGCG 1 cut(s) 114
BspLI GGNNCC 5 cut(s) 475, 985, 1147, 1916, 2181
BspMAI CTGCAG 1 cut(s) 1018
BspPI GGATC 2 cut(s) 793, 1272
BspT107I GGYRCC 1 cut(s) 1145
BsrDI GCAATG 3 cut(s) 1542, 1831, 2109
BsrGI TGTACA 1 cut(s) 1471
BsrI ACTGG 5 cut(s) 247, 361, 1227, 1744, 2033
BssECI CCNNGG 6 cut(s) 558, 823, 1194, 1357, 1520, 1887
BssMI GATC 4 cut(s) 54, 785, 1264, 2274
BssNAI GTATAC 1 cut(s) 335
BssT1I CCWWGG 4 cut(s) 823, 1194, 1357, 1887
Bst1107I GTATAC 1 cut(s) 335
Bst2UI CCWGG 3 cut(s) 1253, 1521, 2184
Bst4CI ACNGT 8 cut(s) 173, 406, 728, 754, 1006, 1570, 1949, 2167
BstAPI GCANNNNNTGC 2 cut(s) 1595, 2096
BstAUI TGTACA 1 cut(s) 1471
BstDSI CCRYGG 1 cut(s) 1357
BstF5I GGATG 8 cut(s) 55, 266, 671, 874, 1055, 1436, 1530, 1591
BstFNI CGCG 1 cut(s) 114
BstH2I RGCGCY 1 cut(s) 1316
BstHHI GCGC 2 cut(s) 114, 1315
BstKTI GATC 4 cut(s) 57, 788, 1267, 2277
BstMBI GATC 4 cut(s) 54, 785, 1264, 2274
BstMWI GCNNNNNNNGC 5 cut(s) 79, 88, 741, 1595, 2096
BstNI CCWGG 3 cut(s) 1253, 1521, 2184
BstNSI RCATGY 3 cut(s) 139, 1906, 2096
BstSCI CCNGG 4 cut(s) 558, 1251, 1519, 2182
BstSFI CTRYAG 3 cut(s) 812, 1014, 2163
BstUI CGCG 1 cut(s) 114
BstV1I GCAGC 2 cut(s) 756, 1544
BstV2I GAAGAC 3 cut(s) 132, 179, 814
BstX2I RGATCY 1 cut(s) 1264
BstXI CCANNNNNNTGG 1 cut(s) 254
BstYI RGATCY 1 cut(s) 1264
BstZ17I GTATAC 1 cut(s) 335
BsuI GTATCC 1 cut(s) 761
BsuRI GGCC 4 cut(s) 102, 159, 587, 1218
BtgI CCRYGG 1 cut(s) 1357
BtgZI GCGATG 1 cut(s) 1820
BtsCI GGATG 8 cut(s) 55, 266, 671, 874, 1055, 1436, 1530, 1591
BtsI GCAGTG 2 cut(s) 287, 1023
BtsIMutI CAGTG 5 cut(s) 184, 287, 331, 1023, 1722
CaiI CAGNNNCTG 1 cut(s) 404
CfoI GCGC 2 cut(s) 114, 1315
Cfr13I GGNCC 7 cut(s) 157, 257, 474, 984, 1073, 1217, 1379
Csp6I GTAC 9 cut(s) 232, 402, 832, 935, 1007, 1146, 1472, 1571, 2248
CspCI CAANNNNNGTGG 2 cut(s) 307, 342
CviAII CATG 7 cut(s) 136, 413, 1358, 1458, 1903, 2018, 2093
CviQI GTAC 9 cut(s) 232, 402, 832, 935, 1007, 1146, 1472, 1571, 2248
DpnI GATC 4 cut(s) 56, 787, 1266, 2276
DpnII GATC 4 cut(s) 54, 785, 1264, 2274
DraI TTTAAA 1 cut(s) 2284
DraIII CACNNNGTG 1 cut(s) 494
EaeI YGGCCR 1 cut(s) 585
Ecl136II GAGCTC 1 cut(s) 1258
Eco130I CCWWGG 4 cut(s) 823, 1194, 1357, 1887
Eco24I GRGCYC 1 cut(s) 1260
Eco47I GGWCC 5 cut(s) 257, 474, 984, 1073, 1379
Eco47III AGCGCT 1 cut(s) 1314
Eco53kI GAGCTC 1 cut(s) 1258
Eco57I CTGAAG 2 cut(s) 26, 1959
Eco88I CYCGRG 1 cut(s) 1919
EcoICRI GAGCTC 1 cut(s) 1258
EcoRII CCWGG 3 cut(s) 1251, 1519, 2182
EcoT14I CCWWGG 4 cut(s) 823, 1194, 1357, 1887
EcoT38I GRGCYC 1 cut(s) 1260
ErhI CCWWGG 4 cut(s) 823, 1194, 1357, 1887
FaeI CATG 7 cut(s) 139, 416, 1361, 1461, 1906, 2021, 2096
FalI AAGNNNNNCTT 2 cut(s) 1716, 1748
FaqI GGGAC 1 cut(s) 1038
FatI CATG 7 cut(s) 135, 412, 1357, 1457, 1902, 2017, 2092
FauNDI CATATG 1 cut(s) 1556
FbaI TGATCA 1 cut(s) 2274
FblI GTMKAC 1 cut(s) 334
Fnu4HI GCNGC 2 cut(s) 745, 1533
FokI GGATG 8 cut(s) 62, 253, 658, 881, 1042, 1423, 1537, 1598
FriOI GRGCYC 1 cut(s) 1260
Fsp4HI GCNGC 2 cut(s) 745, 1533
FspBI CTAG 7 cut(s) 216, 380, 893, 1491, 1964, 2072, 2159
GlaI GCGC 2 cut(s) 113, 1314
GluI GCNGC 2 cut(s) 745, 1533
GsaI CCCAGC 1 cut(s) 1444
GsuI CTGGAG 2 cut(s) 1274, 2166
HaeII RGCGCY 1 cut(s) 1316
HaeIII GGCC 4 cut(s) 102, 159, 587, 1218
HapII CCGG 3 cut(s) 47, 560, 866
HhaI GCGC 2 cut(s) 114, 1315
Hin1II CATG 7 cut(s) 139, 416, 1361, 1461, 1906, 2021, 2096
Hin6I GCGC 2 cut(s) 112, 1313
HinP1I GCGC 2 cut(s) 112, 1313
HincII GTYRAC 3 cut(s) 316, 881, 898
HindII GTYRAC 3 cut(s) 316, 881, 898
HinfI GANTC 4 cut(s) 208, 1290, 1301, 2135
HpaI GTTAAC 1 cut(s) 316
HpaII CCGG 3 cut(s) 47, 560, 866
HphI GGTGA 2 cut(s) 532, 2198
Hpy166II GTNNAC 9 cut(s) 260, 316, 335, 540, 881, 898, 1379, 1566, 1814
Hpy188I TCNGA 6 cut(s) 38, 207, 1335, 1632, 1939, 2274
Hpy8I GTNNAC 9 cut(s) 260, 316, 335, 540, 881, 898, 1379, 1566, 1814
HpyAV CCTTC 4 cut(s) 948, 1208, 1561, 2021
HpyCH4III ACNGT 8 cut(s) 173, 406, 728, 754, 1006, 1570, 1949, 2167
HpyF10VI GCNNNNNNNGC 5 cut(s) 79, 88, 741, 1595, 2096
Hsp92II CATG 7 cut(s) 139, 416, 1361, 1461, 1906, 2021, 2096
HspAI GCGC 2 cut(s) 112, 1313
Kpn2I TCCGGA 2 cut(s) 46, 865
KpnI GGTACC 1 cut(s) 1149
Ksp22I TGATCA 1 cut(s) 2274
KspAI GTTAAC 1 cut(s) 316
Kzo9I GATC 4 cut(s) 54, 785, 1264, 2274
LmnI GCTCC 3 cut(s) 1255, 1914, 2185
Lsp1109I GCAGC 2 cut(s) 756, 1544
LweI GCATC 4 cut(s) 1330, 1445, 1576, 2003
MaeI CTAG 7 cut(s) 216, 380, 893, 1491, 1964, 2072, 2159
MaeIII GTNAC 7 cut(s) 363, 447, 513, 713, 1108, 1639, 2140
MalI GATC 4 cut(s) 56, 787, 1266, 2276
MboI GATC 4 cut(s) 54, 785, 1264, 2274
MboII GAAGA 9 cut(s) 121, 132, 179, 203, 382, 419, 819, 1619, 1952
MflI RGATCY 1 cut(s) 1264
MhlI GDGCHC 1 cut(s) 1260
MlsI TGGCCA 1 cut(s) 587
MluNI TGGCCA 1 cut(s) 587
MlyI GAGTC 1 cut(s) 1310
MmeI TCCRAC 4 cut(s) 818, 1072, 1394, 1983
MnlI CCTC 9 cut(s) 665, 704, 830, 1585, 1777, 1917, 1928, 1962, 2123
Mox20I TGGCCA 1 cut(s) 587
MroI TCCGGA 2 cut(s) 46, 865
MroXI GAANNNNTTC 4 cut(s) 536, 1626, 1732, 2010
MscI TGGCCA 1 cut(s) 587
Msp20I TGGCCA 1 cut(s) 587
MspA1I CMGCKG 1 cut(s) 73
MspI CCGG 3 cut(s) 47, 560, 866
MspR9I CCNGG 4 cut(s) 560, 1253, 1521, 2184
MvaI CCWGG 3 cut(s) 1253, 1521, 2184
MvnI CGCG 1 cut(s) 114
MwoI GCNNNNNNNGC 5 cut(s) 79, 88, 741, 1595, 2096
NciI CCSGG 1 cut(s) 560
NcoI CCATGG 1 cut(s) 1357
NdeI CATATG 1 cut(s) 1556
NdeII GATC 4 cut(s) 54, 785, 1264, 2274
NlaIII CATG 7 cut(s) 139, 416, 1361, 1461, 1906, 2021, 2096
NlaIV GGNNCC 5 cut(s) 475, 985, 1147, 1916, 2181
NmuCI GTSAC 3 cut(s) 447, 1108, 2140
NspI RCATGY 3 cut(s) 139, 1906, 2096
PaeR7I CTCGAG 1 cut(s) 1919
PciI ACATGT 2 cut(s) 135, 2092
PdmI GAANNNNTTC 4 cut(s) 536, 1626, 1732, 2010
PfeI GAWTC 3 cut(s) 208, 1290, 2135
PflMI CCANNNNNTGG 1 cut(s) 1376
PkrI GCNGC 2 cut(s) 746, 1534
PleI GAGTC 1 cut(s) 1309
PpsI GAGTC 1 cut(s) 1309
PscI ACATGT 2 cut(s) 135, 2092
PshBI ATTAAT 1 cut(s) 2262
Psp124BI GAGCTC 1 cut(s) 1260
Psp6I CCWGG 3 cut(s) 1251, 1519, 2182
PspFI CCCAGC 1 cut(s) 1440
PspGI CCWGG 3 cut(s) 1251, 1519, 2182
PspN4I GGNNCC 5 cut(s) 475, 985, 1147, 1916, 2181
PspPI GGNCC 7 cut(s) 157, 257, 474, 984, 1073, 1217, 1379
PsrI GAACNNNNNNTAC 2 cut(s) 498, 530
PstI CTGCAG 1 cut(s) 1018
PstNI CAGNNNCTG 1 cut(s) 404
PsuI RGATCY 1 cut(s) 1264
PvuII CAGCTG 1 cut(s) 73
RsaI GTAC 9 cut(s) 233, 403, 833, 936, 1008, 1147, 1473, 1572, 2249
RsaNI GTAC 9 cut(s) 232, 402, 832, 935, 1007, 1146, 1472, 1571, 2248
SacI GAGCTC 1 cut(s) 1260
SatI GCNGC 2 cut(s) 745, 1533
Sau3AI GATC 4 cut(s) 54, 785, 1264, 2274
Sau96I GGNCC 7 cut(s) 157, 257, 474, 984, 1073, 1217, 1379
ScaI AGTACT 1 cut(s) 2249
SchI GAGTC 1 cut(s) 1310
ScrFI CCNGG 4 cut(s) 560, 1253, 1521, 2184
SduI GDGCHC 1 cut(s) 1260
SfaNI GCATC 4 cut(s) 1330, 1445, 1576, 2003
SfcI CTRYAG 3 cut(s) 812, 1014, 2163
Sfr274I CTCGAG 1 cut(s) 1919
SinI GGWCC 5 cut(s) 257, 474, 984, 1073, 1379
SlaI CTCGAG 1 cut(s) 1919
SmlI CTYRAG 3 cut(s) 656, 739, 1919
SmoI CTYRAG 3 cut(s) 656, 739, 1919
SsiI CCGC 3 cut(s) 410, 1431, 1748
SspI AATATT 2 cut(s) 346, 1478
SspMI CTAG 7 cut(s) 216, 380, 893, 1491, 1964, 2072, 2159
SstI GAGCTC 1 cut(s) 1260
StyD4I CCNGG 4 cut(s) 558, 1251, 1519, 2182
StyI CCWWGG 4 cut(s) 823, 1194, 1357, 1887
TaaI ACNGT 8 cut(s) 173, 406, 728, 754, 1006, 1570, 1949, 2167
TaqI TCGA 2 cut(s) 1212, 1920
TatI WGTACW 4 cut(s) 231, 831, 1471, 2247
TfiI GAWTC 3 cut(s) 208, 1290, 2135
TscAI CASTG 5 cut(s) 184, 287, 331, 1023, 1722
TseFI GTSAC 3 cut(s) 447, 1108, 2140
TseI GCWGC 2 cut(s) 744, 1532
Tsp45I GTSAC 3 cut(s) 447, 1108, 2140
TspDTI ATGAA 6 cut(s) 885, 1221, 1485, 1543, 1695, 2003
TspGWI ACGGA 1 cut(s) 870
TspRI CASTG 5 cut(s) 184, 287, 331, 1023, 1722
Van91I CCANNNNNTGG 1 cut(s) 1376
VpaK11BI GGWCC 5 cut(s) 257, 474, 984, 1073, 1379
VspI ATTAAT 1 cut(s) 2262
XceI RCATGY 3 cut(s) 139, 1906, 2096
XcmI CCANNNNNNNNNTGG 3 cut(s) 273, 682, 1017
XhoI CTCGAG 1 cut(s) 1919
XmiI GTMKAC 1 cut(s) 334
XmnI GAANNNNTTC 4 cut(s) 536, 1626, 1732, 2010
XspI CTAG 7 cut(s) 216, 380, 893, 1491, 1964, 2072, 2159
ZrmI AGTACT 1 cut(s) 2249
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.