Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0009249

Physical Location & Seq

Genomic Coordinates Forward (+)

6262935 .. 6270395

Gene Structure 7461 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G115900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3015 bp

ATGGCGCCGAGTCCCAGGGGCCTCCAGCTGACACAAGTCTCCCCCCGAGCACGGAAGCTGCCGGAGATGGTTGCCGGCGGCGACTTCGGCGATTTGGAGGACGTGAGGCTCTTGGATTCTTATGATAATTCAGAGGGAGTTGAACAGGGAACGCAGAGGGTTCAAGTCAGAGTCTCTGGCATGACCTGTGCTGCTTGCTCTAATTCTGTTGAAGGTGCTCTCAAAAGCGTCAATGGGGTTCTCACGGCCTCCGTGGCCCTGCTTCAGAACAGGGCCGATGTTGTTTTTGATCCGAGATTGGTCAAGGATGAAGACATCAAGAATGCAATTGAAGATGCCGGGTTTGAGGCAGAGGTTATACCTGAGCAGAGTACAAATGGAATAAAGCAACATGGAACTCTGTTGGGTCAGTTCTCAATAGGTGGTATGACATGTGCAGCCTGTGTGAACTCTGTGGAAGGTATTCTGAAAGGACTTCCTGGGGTCAAAAGAGCCGTAGTAGCCTTGGCTACTTCATTAGGGGAAGTGGAGTATGATCCTACTGTAATTAGCAAAGATGATATAGTCAATGCCATTGAAGATGCTGGTTTTGAAGCATCACTTGTACAGAGTAGTCAGCAGGATAAAATAATACTGGGAGTTGCTGGTGTATTCAGTGAGACAGATGCCCAGACTTTAGAATCCATAATTAGCAACTTGAAAGGGGTGAGACATTTTCGTTTCGACAGGATTTCAAGAGAACTCGAAATCCTATTTGATCCTGAAGTTGTCACTTCTAGATCCGTGGTTGATGGAATTGAGGGGGCAAGCAATGAGAAATTTAAACTACAAGTGGCCAACCCTTATATAAGAATGACTTCTAAAGATGTCGAAGAAGCCGCAAATATGTTTCGGCTTTTCATTTCCAGTCTGTTTCTCAGTATTCCTGTCTTTTTCATTCGAGTTGTTTGTCCTCACATTCCACTTCTGTATTCATTATTGCTCTGGAGATGCGGGCCCTTTGAAATGGGTGATTGGTTGAAGTGGGCATTGGTGAGTGTTGTTCAATTTGTTGTCGGGAAGCGCTTCTACATTGCAGCTGCCAGAGCTCTACGAAATGGTTCGACTAATATGGATGTTTTGGTTGCATTGGGTACTTCAGCCTCTTATTTCTATTCCGTATGTGCACTTCTATACGGTGCAGTTACTGGGTTCTGGTCTCCAACATACTTTGAAACAAGTGCCATGCTAATAACATTTGTACTGTTGGGTAAGTATCTGGAGTGTCTTGCAAAAGGAAAAACATCAGATGCCATCAAAAAGTTGATAGAACTTGCTCCAGCTACGGCATTGTTGCTTGTCAAAGATAAAGATGGGAGATGTATTGGAGAAAGGGAAATTGACGCCTTGCTAATTCAGCCTGGAGATGTGTTAAAAGTTCTTCCTGGTACAAAAGTTCCTGCTGATGGTATGGTTTTGTGGGGTTCAAGTTATGTCAATGAGAGTATGGTGACTGGTGAAGCTATACCTGTTTCAAAGGAAGTCAATTCATTAGTTATCGGAGGAACGATAAATTTGCATGGTGCTCTTAATGTACAAGTTACAAAAGTTGGATCTGATACAGTTTTAAATCAGATAATAAATTTGGTCGAGACTGCTCAGATGTCCAAAGCACCTATTCAGAAATTTGCCGATTTTGTTGCTAGCATTTTTGTCCCTACTGTAGTTGCAATGGCATTGTTGACATTATTGGGTTGGTACATTGCTGGAGCCTTTGGAGCTTACCCAGAAAAGTGGCTCCCTGAAAATGGAAATCACTTTGTTTTTGCCCTTATGTTTTCCATATCAGTTGTGGTAATTGCATGTCCTTGTGCGCTGGGCTTGGCAACACCAACTGCTGTCATGGTTGCGACAGGGGTTGGGGCTAATAATGGTGTGCTGATAAAAGGAGGAGATGCTTTGGAAAGAGCTCAGAAGGTAAAGTATGTAATATTTGACAAAACGGGTACCCTAACCCAAGGAAAAGCTACAGTTACTACTGTAAAAGTTTTCACAGGAATGGATCGTGGAGAGTTTCTTAAATTGGTAGCTTCTGCAGAGGCTAGCAGTGAACACCCACTGGCAAAAGCAATAGTACAATATGCACGCCATTTTCACTTCTTTGATGATCCCTCTGTAACTAACGATGCACCGAACAATAACAAAGAGACTACAATCTCTGGATGGCTTTTTGACGTCTCAGAGTTCTCTGCTTTGCCAGGAAGAGGTATCCAGTGCTTTATAGATGGAAAACTTATTCTGGTTGGCAATAGGAAGTTGATGACTGAAAGTGGAATCGAGATTCCTACGCATGTAGAGAACTTTGTAGTAGAGCTGGAGGAAAGTGCAAAAACAGGCATACTTGTTGCATATGAAGGCAATTTAATTGGTGTGTTGGGGGTTGCGGACCCACTGAAAAGAGAAGCTGCCATAGTAATAGAGGGACTCTGTAAGATGGGTGTCATACCAATCATGGTTACCGGGGATAATTGGAGGACAGCACAGGCTGTTGCTAAGGAGGTTGGCATTCCAGATGTGAGGGCAGAGGTAATGCCCGCTGGAAAAGCTGATGTCATCCGATCATTCCAAAAGGATGGAAGTACAGTTGCAATGGTTGGTGATGGAATCAATGACTCTCCTGCTCTAGCTGCTGCTGATATTGGCATGGCAATTGGGGCGGGGACGGATATTGCAATTGAAGCAGCCGACTACGTGTTGATGAGAAATAACCTGGAAGATGTAATCACAGCCATTGATCTTTCAAGAAAGACCTTTTCTCGGATTCGATTGAATTATGTGTTTGCCATGGCGTACAATGTGATCGCAATACCTATTGCCGCAGGGGTTTTCTTTCCATCACTGGGGATATTGTTGCCGCCATGGGCAGCTGGGGCATGCATGGCTATGTCATCTGTTAGTGTTGTATGCTCTTCTTTGCTCCTTAGGAGATACAGAAAGCCCAGACTTACGGCCATACTGGAAATAGTTGTAGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000160 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009723 GO:0009725 GO:0009755 GO:0009873 GO:0009987 GO:0010033 GO:0010119 GO:0012505 GO:0016020 GO:0023052 GO:0031410 GO:0031982 GO:0031984 GO:0032870 GO:0035556 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071369 GO:0071495 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

ko01524 ko04016 map01524 map04016

Pfam Domains

Protein Families

E1-E2_ATPase HMA Hydrolase

Protein Analysis

1005

Amino Acids

107.67

Weight (kDa)

5.23

Isoelectric Point (pI)

30.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009249)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44790
fragaria_vesca	FvH4_3g12710 FvH4_3g12710 FvH4_3g12710 FvH4_3g12710 FvH4_3g12710
malus_domestica	MD05G1247900.v1.1 MD10G1228800.v1.1
prunus_persica	Prupe.4G115900_v2.0.a1 Prupe.4G115900_v2.0.a1
pyrus_communis	pycom05g22420 pycom10g19240
rosa_chinensis	RchiOBHm_Chr5g0020701
rosa_laevigata	RLG00000032554
rosa_multiflora	Rmu_sc0005607.1_g000032
rosa_roxburghii	Rroxscaffold_1G00057600
rosa_rugosa	Rorug05G0062500
rosa_samantha	Rh5AG152200 Rh5BG151900 Rh5CG163300 Rh5DG151400
rosa_wichuraiana	Rw5G013490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2217
Acc65I	GGTACC	1 cut(s)	1985
AccB1I	GGYRCC	2 cut(s)	4, 1985
AciI	CCGC	8 cut(s)	78, 879, 993, 2423, 2574, 2696, 2856, 2894
AclWI	GGATC	7 cut(s)	284, 530, 752, 774, 1600, 2049, 2141
AcoI	YGGCCR	2 cut(s)	834, 2988
AcsI	RAATTY	4 cut(s)	818, 1552, 1621, 1664
AcuI	CTGAAG	3 cut(s)	248, 783, 1122
AcyI	GRCGYC	3 cut(s)	5, 1383, 2214
AfeI	AGCGCT	1 cut(s)	1064
AfiI	CCNNNNNNNGG	6 cut(s)	51, 1445, 1787, 2243, 2796, 2879
AflIII	ACRYGT	2 cut(s)	431, 2730
AjiI	CACGTC	1 cut(s)	103
AjnI	CCWGG	6 cut(s)	14, 478, 1399, 1423, 2236, 2748
AjuI	GAANNNNNNNTTGG	2 cut(s)	1013, 1045
AloI	GAACNNNNNNTCC	2 cut(s)	732, 764
Alw21I	GWGCWC	6 cut(s)	52, 220, 1090, 1168, 1567, 1951
Alw26I	GTCTC	8 cut(s)	43, 178, 653, 703, 1203, 1625, 2180, 2221
Alw44I	GTGCAC	1 cut(s)	1164
AlwI	GGATC	7 cut(s)	284, 530, 752, 774, 1600, 2049, 2141
AlwNI	CAGNNNCTG	1 cut(s)	1187
Ama87I	CYCGRG	1 cut(s)	45
Aor51HI	AGCGCT	1 cut(s)	1064
AoxI	GGCC	7 cut(s)	19, 246, 255, 273, 834, 995, 2988
ApaI	GGGCCC	1 cut(s)	999
ApaLI	GTGCAC	1 cut(s)	1164
ApoI	RAATTY	4 cut(s)	818, 1552, 1621, 1664
Asp700I	GAANNNNTTC	4 cut(s)	462, 856, 1064, 1099
Asp718I	GGTACC	1 cut(s)	1985
AspLEI	GCGC	3 cut(s)	7, 1065, 1855
AspS9I	GGNCC	6 cut(s)	19, 256, 273, 995, 996, 2425
AsuC2I	CCSGG	2 cut(s)	340, 2500
AsuHPI	GGTGA	6 cut(s)	718, 1022, 1045, 1501, 1508, 2648
AsuNHI	GCTAGC	2 cut(s)	1682, 2081
AvaI	CYCGRG	1 cut(s)	45
AvaII	GGWCC	1 cut(s)	2425
AxyI	CCTNAGG	1 cut(s)	2960
BaeGI	GKGCMC	2 cut(s)	999, 1168
BaeI	ACNNNNGTAYC	2 cut(s)	1419, 1452
BalI	TGGCCA	1 cut(s)	836
BanI	GGYRCC	2 cut(s)	4, 1985
BanII	GRGCYC	3 cut(s)	999, 1090, 1951
BarI	GAAGNNNNNNTAC	4 cut(s)	1052, 1084, 1152, 1184
BbsI	GAAGAC	1 cut(s)	318
Bbv12I	GWGCWC	6 cut(s)	52, 220, 1090, 1168, 1567, 1951
BceAI	ACGGC	4 cut(s)	261, 479, 1341, 3003
BcgI	CGANNNNNNTGC	4 cut(s)	1537, 1571, 1661, 1695
BciT130I	CCWGG	6 cut(s)	16, 480, 1401, 1425, 2238, 2750
BciVI	GTATCC	1 cut(s)	2258
BcnI	CCSGG	2 cut(s)	340, 2500
BcoDI	GTCTC	8 cut(s)	43, 178, 653, 703, 1203, 1625, 2180, 2221
BfaI	CTAG	4 cut(s)	777, 1683, 2082, 2663
BfmI	CTRYAG	3 cut(s)	1701, 2007, 2073
BfoI	RGCGCY	2 cut(s)	8, 1066
BfuI	GTATCC	1 cut(s)	2258
BglI	GCCNNNNNGGC	1 cut(s)	254
Bme1390I	CCNGG	8 cut(s)	16, 340, 480, 1401, 1425, 2238, 2500, 2750
Bme18I	GGWCC	1 cut(s)	2425
BmeT110I	CYCGRG	1 cut(s)	45
BmgBI	CACGTC	1 cut(s)	103
BmgT120I	GGNCC	6 cut(s)	19, 256, 273, 995, 996, 2425
BmiI	GGNNCC	7 cut(s)	6, 20, 997, 1750, 1778, 1987, 2427
BmrFI	CCNGG	8 cut(s)	16, 340, 480, 1401, 1425, 2238, 2500, 2750
BmrI	ACTGGG	3 cut(s)	644, 1197, 2888
BmsI	GCATC	8 cut(s)	325, 571, 605, 655, 980, 1279, 1924, 2155
BmtI	GCTAGC	2 cut(s)	1686, 2085
BmuI	ACTGGG	3 cut(s)	644, 1197, 2888
BoxI	GACNNNNGTC	1 cut(s)	35
BpiI	GAAGAC	1 cut(s)	318
BpmI	CTGGAG	7 cut(s)	8, 1006, 1280, 1302, 1422, 1767, 2375
Bpu10I	CCTNAGC	2 cut(s)	363, 2532
BpuMI	CCSGG	2 cut(s)	340, 2500
BsaAI	YACGTR	1 cut(s)	2731
BsaHI	GRCGYC	3 cut(s)	5, 1383, 2214
BsaI	GGTCTC	1 cut(s)	1203
Bsc4I	CCNNNNNNNGG	6 cut(s)	51, 1445, 1787, 2243, 2796, 2879
Bse118I	RCCGGY	1 cut(s)	74
Bse1I	ACTGG	8 cut(s)	639, 906, 1192, 1498, 2103, 2251, 2883, 3000
Bse21I	CCTNAGG	1 cut(s)	2960
Bse3DI	GCAATG	5 cut(s)	817, 1071, 1716, 1740, 2634
BseBI	CCWGG	6 cut(s)	16, 480, 1401, 1425, 2238, 2750
BseGI	GGATG	5 cut(s)	313, 1120, 2207, 2592, 2617
BseLI	CCNNNNNNNGG	6 cut(s)	51, 1445, 1787, 2243, 2796, 2879
BseMI	GCAATG	5 cut(s)	817, 1071, 1716, 1740, 2634
BseMII	CTCAG	5 cut(s)	354, 931, 1652, 1964, 2232
BseNI	ACTGG	8 cut(s)	639, 906, 1192, 1498, 2103, 2251, 2883, 3000
BseRI	GAGGAG	1 cut(s)	1944
BseSI	GKGCMC	2 cut(s)	999, 1168
BseYI	CCCAGC	2 cut(s)	1855, 2906
BsgI	GTGCAG	2 cut(s)	456, 1200
BshFI	GGCC	7 cut(s)	21, 248, 257, 275, 836, 997, 2990
BshNI	GGYRCC	2 cut(s)	4, 1985
BsiHKAI	GWGCWC	6 cut(s)	52, 220, 1090, 1168, 1567, 1951
BsiHKCI	CYCGRG	1 cut(s)	45
BsiSI	CCGG	4 cut(s)	62, 75, 339, 2499
BslFI	GGGAC	3 cut(s)	1679, 2475, 2713
BslI	CCNNNNNNNGG	6 cut(s)	51, 1445, 1787, 2243, 2796, 2879
BsmAI	GTCTC	8 cut(s)	43, 178, 653, 703, 1203, 1625, 2180, 2221
BsmBI	CGTCTC	1 cut(s)	2221
BsmFI	GGGAC	3 cut(s)	1679, 2475, 2713
BsmI	GAATGC	2 cut(s)	328, 2544
BsnI	GGCC	7 cut(s)	21, 248, 257, 275, 836, 997, 2990
Bso31I	GGTCTC	1 cut(s)	1203
BsoBI	CYCGRG	1 cut(s)	45
Bsp120I	GGGCCC	1 cut(s)	995
Bsp1286I	GDGCHC	7 cut(s)	52, 220, 999, 1090, 1168, 1567, 1951
Bsp1407I	TGTACA	2 cut(s)	604, 1573
Bsp19I	CCATGG	2 cut(s)	2823, 2897
BspACI	CCGC	8 cut(s)	78, 879, 993, 2423, 2574, 2696, 2856, 2894
BspANI	GGCC	7 cut(s)	21, 248, 257, 275, 836, 997, 2990
BspCNI	CTCAG	5 cut(s)	355, 930, 1651, 1963, 2231
BspLI	GGNNCC	7 cut(s)	6, 20, 997, 1750, 1778, 1987, 2427
BspMAI	CTGCAG	1 cut(s)	2077
BspOI	GCTAGC	2 cut(s)	1686, 2085
BspPI	GGATC	7 cut(s)	284, 530, 752, 774, 1600, 2049, 2141
BspQI	GCTCTTC	1 cut(s)	2953
BspT107I	GGYRCC	2 cut(s)	4, 1985
BspTNI	GGTCTC	1 cut(s)	1203
BsrDI	GCAATG	5 cut(s)	817, 1071, 1716, 1740, 2634
BsrFI	RCCGGY	1 cut(s)	74
BsrGI	TGTACA	2 cut(s)	604, 1573
BsrI	ACTGG	8 cut(s)	639, 906, 1192, 1498, 2103, 2251, 2883, 3000
BssAI	RCCGGY	1 cut(s)	74
BssNI	GRCGYC	3 cut(s)	5, 1383, 2214
BssT1I	CCWWGG	4 cut(s)	504, 1996, 2823, 2897
Bst2UI	CCWGG	6 cut(s)	16, 480, 1401, 1425, 2238, 2750
Bst4CI	ACNGT	8 cut(s)	544, 1178, 1245, 1603, 1702, 2011, 2020, 2623
Bst6I	CTCTTC	2 cut(s)	2236, 2953
BstACI	GRCGYC	3 cut(s)	5, 1383, 2214
BstAUI	TGTACA	2 cut(s)	604, 1573
BstBAI	YACGTR	1 cut(s)	2731
BstC8I	GCNNGC	9 cut(s)	76, 196, 808, 995, 1684, 2083, 2125, 2574, 2914
BstDEI	CTNAG	7 cut(s)	363, 917, 1638, 1950, 2218, 2532, 2960
BstDSI	CCRYGG	4 cut(s)	252, 783, 2823, 2897
BstEII	GGTNACC	1 cut(s)	2494
BstF5I	GGATG	5 cut(s)	313, 1120, 2207, 2592, 2617
BstH2I	RGCGCY	2 cut(s)	8, 1066
BstHHI	GCGC	3 cut(s)	7, 1065, 1855
BstMAI	GTCTC	8 cut(s)	43, 178, 653, 703, 1203, 1625, 2180, 2221
BstNI	CCWGG	6 cut(s)	16, 480, 1401, 1425, 2238, 2750
BstNSI	RCATGY	4 cut(s)	435, 1845, 2333, 2916
BstPAI	GACNNNNGTC	1 cut(s)	35
BstPI	GGTNACC	1 cut(s)	2494
BstSCI	CCNGG	8 cut(s)	14, 338, 478, 1399, 1423, 2236, 2498, 2748
BstSFI	CTRYAG	3 cut(s)	1701, 2007, 2073
BstSLI	GKGCMC	2 cut(s)	999, 1168
BstV2I	GAAGAC	1 cut(s)	318
BstX2I	RGATCY	2 cut(s)	779, 1592
BstXI	CCANNNNNNTGG	2 cut(s)	1773, 2612
BstYI	RGATCY	2 cut(s)	779, 1592
Bsu36I	CCTNAGG	1 cut(s)	2960
BsuI	GTATCC	1 cut(s)	2258
BsuRI	GGCC	7 cut(s)	21, 248, 257, 275, 836, 997, 2990
BtgI	CCRYGG	4 cut(s)	252, 783, 2823, 2897
BtrI	CACGTC	1 cut(s)	103
BtsCI	GGATG	5 cut(s)	313, 1120, 2207, 2592, 2617
BtsI	GCAGTG	1 cut(s)	2092
BtsIMutI	CAGTG	6 cut(s)	661, 2092, 2096, 2258, 2429, 2876
Cac8I	GCNNGC	9 cut(s)	76, 196, 808, 995, 1684, 2083, 2125, 2574, 2914
CaiI	CAGNNNCTG	1 cut(s)	1187
CfoI	GCGC	3 cut(s)	7, 1065, 1855
Cfr10I	RCCGGY	1 cut(s)	74
Cfr13I	GGNCC	6 cut(s)	19, 256, 273, 995, 996, 2425
CseI	GACGC	2 cut(s)	217, 1391
DdeI	CTNAG	7 cut(s)	363, 917, 1638, 1950, 2218, 2532, 2960
DinI	GGCGCC	1 cut(s)	6
DraI	TTTAAA	2 cut(s)	823, 1608
EaeI	YGGCCR	2 cut(s)	834, 2988
Eam1104I	CTCTTC	2 cut(s)	2236, 2953
EarI	CTCTTC	2 cut(s)	2236, 2953
Ecl136II	GAGCTC	2 cut(s)	1088, 1949
Eco130I	CCWWGG	4 cut(s)	504, 1996, 2823, 2897
Eco24I	GRGCYC	3 cut(s)	999, 1090, 1951
Eco31I	GGTCTC	1 cut(s)	1203
Eco47I	GGWCC	1 cut(s)	2425
Eco47III	AGCGCT	1 cut(s)	1064
Eco53kI	GAGCTC	2 cut(s)	1088, 1949
Eco57I	CTGAAG	3 cut(s)	248, 783, 1122
Eco81I	CCTNAGG	1 cut(s)	2960
Eco88I	CYCGRG	1 cut(s)	45
Eco91I	GGTNACC	1 cut(s)	2494
EcoICRI	GAGCTC	2 cut(s)	1088, 1949
EcoO109I	RGGNCCY	2 cut(s)	19, 996
EcoO65I	GGTNACC	1 cut(s)	2494
EcoRII	CCWGG	6 cut(s)	14, 478, 1399, 1423, 2236, 2748
EcoT14I	CCWWGG	4 cut(s)	504, 1996, 2823, 2897
EcoT22I	ATGCAT	1 cut(s)	2918
EcoT38I	GRGCYC	3 cut(s)	999, 1090, 1951
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	4 cut(s)	504, 1996, 2823, 2897
Esp3I	CGTCTC	1 cut(s)	2221
FalI	AAGNNNNNCTT	4 cut(s)	585, 617, 841, 873
FaqI	GGGAC	3 cut(s)	1679, 2475, 2713
FauI	CCCGC	3 cut(s)	986, 2581, 2689
FauNDI	CATATG	1 cut(s)	2389
FokI	GGATG	5 cut(s)	320, 1127, 2214, 2579, 2624
FriOI	GRGCYC	3 cut(s)	999, 1090, 1951
FspBI	CTAG	4 cut(s)	777, 1683, 2082, 2663
GlaI	GCGC	3 cut(s)	6, 1064, 1854
GsaI	CCCAGC	2 cut(s)	1859, 2910
GsuI	CTGGAG	7 cut(s)	8, 1006, 1280, 1302, 1422, 1767, 2375
HaeII	RGCGCY	2 cut(s)	8, 1066
HaeIII	GGCC	7 cut(s)	21, 248, 257, 275, 836, 997, 2990
HapII	CCGG	4 cut(s)	62, 75, 339, 2499
HgaI	GACGC	2 cut(s)	217, 1391
HhaI	GCGC	3 cut(s)	7, 1065, 1855
Hin1I	GRCGYC	3 cut(s)	5, 1383, 2214
Hin6I	GCGC	3 cut(s)	5, 1063, 1853
HinP1I	GCGC	3 cut(s)	5, 1063, 1853
HincII	GTYRAC	1 cut(s)	1722
HindII	GTYRAC	1 cut(s)	1722
HpaII	CCGG	4 cut(s)	62, 75, 339, 2499
HphI	GGTGA	6 cut(s)	718, 1022, 1045, 1501, 1508, 2648
Hpy166II	GTNNAC	4 cut(s)	448, 1166, 1722, 2090
Hpy8I	GTNNAC	4 cut(s)	448, 1166, 1722, 2090
HpyAV	CCTTC	4 cut(s)	206, 452, 1948, 2387
HpyCH4III	ACNGT	8 cut(s)	544, 1178, 1245, 1603, 1702, 2011, 2020, 2623
HpyCH4IV	ACGT	3 cut(s)	102, 2214, 2730
HpyF3I	CTNAG	7 cut(s)	363, 917, 1638, 1950, 2218, 2532, 2960
HpySE526I	ACGT	3 cut(s)	102, 2214, 2730
Hsp92I	GRCGYC	3 cut(s)	5, 1383, 2214
HspAI	GCGC	3 cut(s)	5, 1063, 1853
KasI	GGCGCC	1 cut(s)	4
KpnI	GGTACC	1 cut(s)	1989
KroI	GCCGGC	1 cut(s)	74
KroNI	GCCGGC	1 cut(s)	76
LguI	GCTCTTC	1 cut(s)	2953
LmnI	GCTCC	5 cut(s)	1321, 1748, 1757, 1782, 2961
LweI	GCATC	8 cut(s)	325, 571, 605, 655, 980, 1279, 1924, 2155
MaeI	CTAG	4 cut(s)	777, 1683, 2082, 2663
MaeII	ACGT	3 cut(s)	102, 2214, 2730
MaeIII	GTNAC	7 cut(s)	769, 1183, 1489, 1579, 2011, 2155, 2494
MboII	GAAGA	8 cut(s)	323, 344, 590, 884, 1412, 2253, 2765, 2940
MfeI	CAATTG	3 cut(s)	327, 2688, 2712
MflI	RGATCY	2 cut(s)	779, 1592
MhlI	GDGCHC	7 cut(s)	52, 220, 999, 1090, 1168, 1567, 1951
MlsI	TGGCCA	1 cut(s)	836
MluNI	TGGCCA	1 cut(s)	836
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	4 cut(s)	19, 180, 2457, 2645
MmeI	TCCRAC	2 cut(s)	1226, 1570
Mox20I	TGGCCA	1 cut(s)	836
Mph1103I	ATGCAT	1 cut(s)	2918
MroNI	GCCGGC	1 cut(s)	74
MroXI	GAANNNNTTC	4 cut(s)	462, 856, 1064, 1099
MscI	TGGCCA	1 cut(s)	836
MseI	TTAA	6 cut(s)	822, 1412, 1569, 1607, 2058, 2402
MslI	CAYNNNNRTG	2 cut(s)	2036, 2921
Msp20I	TGGCCA	1 cut(s)	836
MspA1I	CMGCKG	4 cut(s)	28, 1079, 2576, 2906
MspI	CCGG	4 cut(s)	62, 75, 339, 2499
MspR9I	CCNGG	8 cut(s)	16, 340, 480, 1401, 1425, 2238, 2500, 2750
MunI	CAATTG	3 cut(s)	327, 2688, 2712
Mva1269I	GAATGC	2 cut(s)	328, 2544
MvaI	CCWGG	6 cut(s)	16, 480, 1401, 1425, 2238, 2750
NaeI	GCCGGC	1 cut(s)	76
NarI	GGCGCC	1 cut(s)	5
NciI	CCSGG	2 cut(s)	340, 2500
NcoI	CCATGG	2 cut(s)	2823, 2897
NdeI	CATATG	1 cut(s)	2389
NgoMIV	GCCGGC	1 cut(s)	74
NheI	GCTAGC	2 cut(s)	1682, 2081
NlaIV	GGNNCC	7 cut(s)	6, 20, 997, 1750, 1778, 1987, 2427
NmeAIII	GCCGAG	1 cut(s)	33
NmuCI	GTSAC	2 cut(s)	769, 1489
NsiI	ATGCAT	1 cut(s)	2918
NspI	RCATGY	4 cut(s)	435, 1845, 2333, 2916
PaeI	GCATGC	1 cut(s)	2916
PasI	CCCWGGG	1 cut(s)	15
PciI	ACATGT	1 cut(s)	431
PciSI	GCTCTTC	1 cut(s)	2953
PctI	GAATGC	2 cut(s)	328, 2544
PdiI	GCCGGC	1 cut(s)	76
PdmI	GAANNNNTTC	4 cut(s)	462, 856, 1064, 1099
PfeI	GAWTC	6 cut(s)	116, 680, 2313, 2320, 2643, 2800
PleI	GAGTC	4 cut(s)	18, 179, 2457, 2645
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	4 cut(s)	18, 179, 2457, 2645
Ppu21I	YACGTR	1 cut(s)	2731
PscI	ACATGT	1 cut(s)	431
PshAI	GACNNNNGTC	1 cut(s)	35
Psp124BI	GAGCTC	2 cut(s)	1090, 1951
Psp6I	CCWGG	6 cut(s)	14, 478, 1399, 1423, 2236, 2748
PspEI	GGTNACC	1 cut(s)	2494
PspFI	CCCAGC	2 cut(s)	1855, 2906
PspGI	CCWGG	6 cut(s)	14, 478, 1399, 1423, 2236, 2748
PspN4I	GGNNCC	7 cut(s)	6, 20, 997, 1750, 1778, 1987, 2427
PspOMI	GGGCCC	1 cut(s)	995
PspPI	GGNCC	6 cut(s)	19, 256, 273, 995, 996, 2425
PstI	CTGCAG	1 cut(s)	2077
PstNI	CAGNNNCTG	1 cut(s)	1187
PsuI	RGATCY	2 cut(s)	779, 1592
PvuII	CAGCTG	3 cut(s)	28, 1079, 2906
RseI	CAYNNNNRTG	2 cut(s)	2036, 2921
SacI	GAGCTC	2 cut(s)	1090, 1951
SapI	GCTCTTC	1 cut(s)	2953
SaqAI	TTAA	6 cut(s)	822, 1412, 1569, 1607, 2058, 2402
Sau96I	GGNCC	6 cut(s)	19, 256, 273, 995, 996, 2425
SchI	GAGTC	4 cut(s)	19, 180, 2457, 2645
ScrFI	CCNGG	8 cut(s)	16, 340, 480, 1401, 1425, 2238, 2500, 2750
SduI	GDGCHC	7 cut(s)	52, 220, 999, 1090, 1168, 1567, 1951
SfaNI	GCATC	8 cut(s)	325, 571, 605, 655, 980, 1279, 1924, 2155
SfcI	CTRYAG	3 cut(s)	1701, 2007, 2073
SfiI	GGCCNNNNNGGCC	1 cut(s)	254
SfoI	GGCGCC	1 cut(s)	6
SinI	GGWCC	1 cut(s)	2425
SmiMI	CAYNNNNRTG	2 cut(s)	2036, 2921
SphI	GCATGC	1 cut(s)	2916
SsiI	CCGC	8 cut(s)	78, 879, 993, 2423, 2574, 2696, 2856, 2894
SspDI	GGCGCC	1 cut(s)	4
SspI	AATATT	1 cut(s)	1971
SspMI	CTAG	4 cut(s)	777, 1683, 2082, 2663
SstI	GAGCTC	2 cut(s)	1090, 1951
StyD4I	CCNGG	8 cut(s)	14, 338, 478, 1399, 1423, 2236, 2498, 2748
StyI	CCWWGG	4 cut(s)	504, 1996, 2823, 2897
TaaI	ACNGT	8 cut(s)	544, 1178, 1245, 1603, 1702, 2011, 2020, 2623
TaiI	ACGT	3 cut(s)	105, 2217, 2733
TaqI	TCGA	8 cut(s)	723, 744, 870, 940, 1103, 1629, 2316, 2803
TatI	WGTACW	6 cut(s)	371, 604, 1240, 1573, 2113, 2618
TauI	GCSGC	4 cut(s)	81, 881, 2858, 2896
TfiI	GAWTC	6 cut(s)	116, 680, 2313, 2320, 2643, 2800
Tru1I	TTAA	6 cut(s)	822, 1412, 1569, 1607, 2058, 2402
Tru9I	TTAA	6 cut(s)	822, 1412, 1569, 1607, 2058, 2402
TscAI	CASTG	6 cut(s)	661, 2092, 2103, 2258, 2436, 2883
TseFI	GTSAC	2 cut(s)	769, 1489
Tsp45I	GTSAC	2 cut(s)	769, 1489
TspDTI	ATGAA	7 cut(s)	324, 504, 889, 925, 963, 1518, 2406
TspGWI	ACGGA	5 cut(s)	67, 241, 772, 1147, 2717
TspRI	CASTG	6 cut(s)	661, 2092, 2103, 2258, 2436, 2883
VneI	GTGCAC	1 cut(s)	1164
VpaK11BI	GGWCC	1 cut(s)	2425
XapI	RAATTY	4 cut(s)	818, 1552, 1621, 1664
XbaI	TCTAGA	1 cut(s)	776
XceI	RCATGY	4 cut(s)	435, 1845, 2333, 2916
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1828
XmnI	GAANNNNTTC	4 cut(s)	462, 856, 1064, 1099
XspI	CTAG	4 cut(s)	777, 1683, 2082, 2663
ZraI	GACGTC	1 cut(s)	2215
Zsp2I	ATGCAT	1 cut(s)	2918

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.