Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0009249

Physical Location & Seq

Genomic Coordinates Reverse (-)

24773238 .. 24777071

Gene Structure 3834 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g22420.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2121 bp

ATGACTTCTAAAGATATCGATGAAGCCTCAAATATGTTTCGGCTGTTTCTTTCCAGTTTGCTTCTCAGTATTCCTATCTTTTTCATTCGAGTAGTTTGTCCTCATATCCCGCTTCTTTATTCGTTACTGCTCTGGAAATGTGGGCCCTTTGAAATGGGTGATTGGTTGAAGTGGGCATTGGTCAGTGTTGTTCAATTTGTTATTGGGAAGCGCTTCTACATTGCAGCTGCCAGAGCCTTACGAAATGGTTCAACTAACATGGATGTTTTGGTCGCATTGGGAACTTCGGCCTCTTACTTCTATTCTGTATGCGCACTTCTATATGGTGCAGTCACTGGGTTCTGGTCTCCAACATACTTTGAAACAAGTTCCATGCTAATAACATTTGTACTTTTGGGGAAATATCTGGAGTGCCTTGCAAAAGGAAAAACATCAGATGCCATCAAGAAGTTGATAGAACTTGCTCCAGCTACAGCATTGTTAATTGTCAAAGATAAAGGTGGGAAAGTCATTGGAGAAAGGGAAATTGATGCCTTGCTGATTCAGCCCAGGGATGTGTTAAAAGTTCTTCCTGGTACCAAAGTTCCTGCTGATGGTATGGTTGTGTGGGGTTCAAGTTATGTCAATGAGAGTATGGTGACTGGTGAAGCTACACCTGTTTCAAAGGAAGTAAATTCATTAGTTATCGGAGGAACGATAAATTTACATGGAGCTCTTCACATACAAGTTACAAAAGTTGGATCCGATACAGTTTTAAGTCAGATAATTAATTTGGTCGAGACTGCTCAGATGTCCAAAGCTCCTATTCAGAAATTTGCTGATTTTATTGCTAGCATTTTCGTCCCTACTGTAGTTGCCTTGGCATTGTTGACATTGTTGGGTTGGTATATTGCTGGAGCCTTTGGAGCTTACCCAGAAAAGTGGCTCCCTGAAAATGGAAATCACTTTGTATTTGCCCTTATGTTTTCCATATCGGTTGTGGTAATTGCATGTCCTTGTGCACTGGGCTTGGCAACACCAACTGCTGTCATGGTTGCAACGGGGGTTGGGGCTAATAATGGTGTGCTGATAAAAGGAGGAGATGCTTTGGAAAGAGCTCAGAAGATCAATTACTACTGTAAAAGTTTTCACACGAGCCATTCGATGGATCGTGGAGAATTTCTTAAATTGGTGGCTTCTGCAGAGGCTAGCAGTGAACACCCATTGGCAAAAGCAATAGTGGAATATGCACGCCATTTTCACTTTTTTGATGAGCCTTCCGTAACTAATGATGCACCGAACAAGAGCAAAGACACCACACTTTCTGGATGGCTTTTTGATGCCTCAGAGTTCTCTGCTTTGCCCGGAAGAGGTATACAGTGCTTTATAGATGGAAAACTTGTTCTGGTTGGTAATAGGAAGCTGATGACTGAAAGTGGAATCGACATTCCTACACATGTAGAGAACTTTGTAGTAGAGCTGGAAGAAAGTGCAAAGACAGGCATACTTGTTGCATATGAAGGCAATTTAATTGGTGTATTGGGGGTTGCGGACCCTCTAAAAAGAGAAGCTGCCATAGTGATAGAAGGACTACGTAAGATGGGTGTCATACCAGTCATGGTTACTGGGGATAATCGGAGGACAGCACAAGCTGTTGCTAAGGAGGTTGGCATTCAAGACGTGAGGGCAGAGGTAATGCCGGCTGGAAAAGCTGATGTGGTTTGTTCATTCCAAAAAGATGGAAGTATAGTTGCCATGGTTGGTGACGGAATCAATGACTCTCCTGCCCTAGCTGCTTCTGATGTTGGTATGGCAATTGGGGCGGGGACGGATATTGCAATTGAAGCAGCTGACTACGTGCTGATGAGAAATAACTTGGAAGACGTAATCACAGCCATTGATCTCTCAAGGAAAACCTTTACTCGTATTCGATTGAATTACGTGTTTGCCATGGCGTACAATGTGATCGCAATACCTATTGCCGCAGGGGTCTTCTTCCCATCGCTGGGGATCATGTTGCCGCCATGGGCAGCCGGTGCATGCATGGCTATGTCATCTGTAAGTGTTGTATGCTCTTCTTTGCTCCTTAGGAGGTACAGAAAACCCAGACTTACCGCCATACTGGAAATAGTTGTAGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000160 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009723 GO:0009725 GO:0009755 GO:0009873 GO:0009987 GO:0010033 GO:0010119 GO:0012505 GO:0016020 GO:0023052 GO:0031410 GO:0031982 GO:0031984 GO:0032870 GO:0035556 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071369 GO:0071495 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

ko01524 ko04016 map01524 map04016

Pfam Domains

Protein Families

E1-E2_ATPase HMA Hydrolase

Protein Analysis

707

Amino Acids

75.94

Weight (kDa)

6.26

Isoelectric Point (pI)

27.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009249)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44790
fragaria_vesca	FvH4_3g12710 FvH4_3g12710 FvH4_3g12710 FvH4_3g12710 FvH4_3g12710
malus_domestica	MD05G1247900.v1.1 MD10G1228800.v1.1
prunus_persica	Prupe.4G115900_v2.0.a1 Prupe.4G115900_v2.0.a1
pyrus_communis	pycom05g22420 pycom10g19240
rosa_chinensis	RchiOBHm_Chr5g0020701
rosa_laevigata	RLG00000032554
rosa_multiflora	Rmu_sc0005607.1_g000032
rosa_roxburghii	Rroxscaffold_1G00057600
rosa_rugosa	Rorug05G0062500
rosa_samantha	Rh5AG152200 Rh5BG151900 Rh5CG163300 Rh5DG151400
rosa_wichuraiana	Rw5G013490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	313
Acc65I	GGTACC	1 cut(s)	575
AccB1I	GGYRCC	1 cut(s)	575
AccB7I	CCANNNNNTGG	1 cut(s)	1144
AccI	GTMKAC	1 cut(s)	1354
AciI	CCGC	6 cut(s)	110, 1529, 1802, 1962, 2000, 2094
AclWI	GGATC	4 cut(s)	735, 748, 1155, 1997
AcsI	RAATTY	4 cut(s)	673, 700, 812, 1157
AfaI	GTAC	4 cut(s)	390, 577, 1937, 2075
AfeI	AGCGCT	1 cut(s)	212
AfiI	CCNNNNNNNGG	6 cut(s)	593, 935, 1144, 1349, 1984, 1985
AflIII	ACRYGT	2 cut(s)	1435, 1920
AjiI	CACGTC	1 cut(s)	1660
AjnI	CCWGG	2 cut(s)	548, 571
AjuI	GAANNNNNNNTTGG	2 cut(s)	161, 193
AloI	GAACNNNNNNTCC	2 cut(s)	1365, 1397
Alw21I	GWGCWC	3 cut(s)	715, 1003, 1099
Alw26I	GTCTC	2 cut(s)	351, 773
Alw44I	GTGCAC	1 cut(s)	999
AlwI	GGATC	4 cut(s)	735, 748, 1155, 1997
AlwNI	CAGNNNCTG	1 cut(s)	335
Aor51HI	AGCGCT	1 cut(s)	212
AoxI	GGCC	2 cut(s)	143, 288
ApaI	GGGCCC	1 cut(s)	147
ApaLI	GTGCAC	1 cut(s)	999
ApeKI	GCWGC	6 cut(s)	224, 227, 1550, 1772, 1826, 2009
ApoI	RAATTY	4 cut(s)	673, 700, 812, 1157
AseI	ATTAAT	1 cut(s)	768
Asp700I	GAANNNNTTC	2 cut(s)	212, 247
Asp718I	GGTACC	1 cut(s)	575
AspLEI	GCGC	2 cut(s)	213, 314
AspS9I	GGNCC	3 cut(s)	143, 144, 1531
AsuC2I	CCSGG	1 cut(s)	1344
AsuHPI	GGTGA	4 cut(s)	170, 649, 656, 1754
AsuNHI	GCTAGC	2 cut(s)	830, 1187
AvaII	GGWCC	1 cut(s)	1531
AxyI	CCTNAGG	1 cut(s)	2066
BaeGI	GKGCMC	2 cut(s)	147, 1003
BaeI	ACNNNNGTAYC	2 cut(s)	567, 600
BamHI	GGATCC	1 cut(s)	740
BanI	GGYRCC	1 cut(s)	575
BanII	GRGCYC	3 cut(s)	147, 715, 1099
BarI	GAAGNNNNNNTAC	6 cut(s)	200, 232, 300, 332, 1094, 1126
BauI	CACGAG	1 cut(s)	1132
BbsI	GAAGAC	2 cut(s)	1866, 1963
Bbv12I	GWGCWC	3 cut(s)	715, 1003, 1099
BbvI	GCAGC	6 cut(s)	214, 236, 1537, 1759, 1838, 2021
BccI	CCATC	8 cut(s)	449, 587, 1138, 1302, 1364, 1573, 1712, 1987
BciT130I	CCWGG	2 cut(s)	550, 573
BcnI	CCSGG	1 cut(s)	1344
BcoDI	GTCTC	2 cut(s)	351, 773
BfaI	CTAG	3 cut(s)	831, 1188, 1769
BfmI	CTRYAG	3 cut(s)	471, 849, 1179
BfoI	RGCGCY	1 cut(s)	214
BisI	GCNGC	8 cut(s)	225, 228, 1551, 1773, 1827, 1962, 2000, 2010
BlsI	GCNGC	8 cut(s)	226, 229, 1552, 1774, 1828, 1963, 2001, 2011
Bme1390I	CCNGG	3 cut(s)	550, 573, 1344
Bme18I	GGWCC	1 cut(s)	1531
BmgBI	CACGTC	1 cut(s)	1660
BmgT120I	GGNCC	3 cut(s)	143, 144, 1531
BmiI	GGNNCC	6 cut(s)	145, 577, 742, 898, 926, 1533
BmrFI	CCNGG	3 cut(s)	550, 573, 1344
BmrI	ACTGGG	3 cut(s)	345, 1013, 1614
BmsI	GCATC	5 cut(s)	427, 520, 1072, 1261, 1309
BmtI	GCTAGC	2 cut(s)	834, 1191
BmuI	ACTGGG	3 cut(s)	345, 1013, 1614
BpiI	GAAGAC	2 cut(s)	1866, 1963
BpmI	CTGGAG	3 cut(s)	428, 450, 915
Bpu10I	CCTNAGC	1 cut(s)	1638
BpuEI	CTTGAG	1 cut(s)	1870
BpuMI	CCSGG	1 cut(s)	1344
Bsa29I	ATCGAT	1 cut(s)	18
BsaAI	YACGTR	3 cut(s)	1574, 1837, 1921
BsaI	GGTCTC	1 cut(s)	351
BsaJI	CCNNGG	6 cut(s)	548, 549, 858, 1734, 1929, 2003
Bsc4I	CCNNNNNNNGG	6 cut(s)	593, 935, 1144, 1349, 1984, 1985
Bse118I	RCCGGY	2 cut(s)	1678, 2012
Bse1I	ACTGG	7 cut(s)	54, 340, 646, 1008, 1592, 1609, 2106
Bse21I	CCTNAGG	1 cut(s)	2066
Bse3DI	GCAATG	1 cut(s)	219
BseBI	CCWGG	2 cut(s)	550, 573
BseCI	ATCGAT	1 cut(s)	18
BseDI	CCNNGG	6 cut(s)	548, 549, 858, 1734, 1929, 2003
BseGI	GGATG	3 cut(s)	268, 559, 1313
BseLI	CCNNNNNNNGG	6 cut(s)	593, 935, 1144, 1349, 1984, 1985
BseMI	GCAATG	1 cut(s)	219
BseMII	CTCAG	4 cut(s)	79, 800, 1112, 1338
BseNI	ACTGG	7 cut(s)	54, 340, 646, 1008, 1592, 1609, 2106
BseRI	GAGGAG	1 cut(s)	1092
BseSI	GKGCMC	2 cut(s)	147, 1003
BseXI	GCAGC	6 cut(s)	214, 236, 1537, 1759, 1838, 2021
BseYI	CCCAGC	1 cut(s)	1984
BsgI	GTGCAG	1 cut(s)	348
BshFI	GGCC	2 cut(s)	145, 290
BshNI	GGYRCC	1 cut(s)	575
BshVI	ATCGAT	1 cut(s)	18
BsiHKAI	GWGCWC	3 cut(s)	715, 1003, 1099
BsiSI	CCGG	3 cut(s)	1344, 1679, 2013
BslFI	GGGAC	2 cut(s)	827, 1819
BslI	CCNNNNNNNGG	6 cut(s)	593, 935, 1144, 1349, 1984, 1985
BsmAI	GTCTC	2 cut(s)	351, 773
BsmFI	GGGAC	2 cut(s)	827, 1819
BsmI	GAATGC	1 cut(s)	1650
BsnI	GGCC	2 cut(s)	145, 290
Bso31I	GGTCTC	1 cut(s)	351
Bsp120I	GGGCCC	1 cut(s)	143
Bsp1286I	GDGCHC	4 cut(s)	147, 715, 1003, 1099
Bsp143I	GATC	6 cut(s)	740, 1104, 1147, 1879, 1944, 1989
Bsp19I	CCATGG	3 cut(s)	1734, 1929, 2003
BspACI	CCGC	6 cut(s)	110, 1529, 1802, 1962, 2000, 2094
BspANI	GGCC	2 cut(s)	145, 290
BspCNI	CTCAG	4 cut(s)	78, 799, 1111, 1337
BspDI	ATCGAT	1 cut(s)	18
BspLI	GGNNCC	6 cut(s)	145, 577, 742, 898, 926, 1533
BspMAI	CTGCAG	1 cut(s)	1183
BspOI	GCTAGC	2 cut(s)	834, 1191
BspPI	GGATC	4 cut(s)	735, 748, 1155, 1997
BspQI	GCTCTTC	2 cut(s)	720, 2059
BspT107I	GGYRCC	1 cut(s)	575
BspTNI	GGTCTC	1 cut(s)	351
BsrDI	GCAATG	1 cut(s)	219
BsrFI	RCCGGY	2 cut(s)	1678, 2012
BsrI	ACTGG	7 cut(s)	54, 340, 646, 1008, 1592, 1609, 2106
BssAI	RCCGGY	2 cut(s)	1678, 2012
BssECI	CCNNGG	6 cut(s)	548, 549, 858, 1734, 1929, 2003
BssMI	GATC	6 cut(s)	740, 1104, 1147, 1879, 1944, 1989
BssNAI	GTATAC	1 cut(s)	1355
BssSI	CACGAG	1 cut(s)	1132
BssT1I	CCWWGG	4 cut(s)	858, 1734, 1929, 2003
Bst1107I	GTATAC	1 cut(s)	1355
Bst2BI	CACGAG	1 cut(s)	1132
Bst2UI	CCWGG	2 cut(s)	550, 573
Bst4CI	ACNGT	4 cut(s)	751, 850, 1118, 1359
Bst6I	CTCTTC	3 cut(s)	720, 1342, 2059
BstAPI	GCANNNNNTGC	1 cut(s)	2015
BstBAI	YACGTR	3 cut(s)	1574, 1837, 1921
BstC8I	GCNNGC	5 cut(s)	832, 1189, 1231, 1680, 2020
BstDEI	CTNAG	6 cut(s)	65, 786, 1098, 1324, 1638, 2066
BstDSI	CCRYGG	3 cut(s)	1734, 1929, 2003
BstF5I	GGATG	3 cut(s)	268, 559, 1313
BstH2I	RGCGCY	1 cut(s)	214
BstHHI	GCGC	2 cut(s)	213, 314
BstKTI	GATC	6 cut(s)	743, 1107, 1150, 1882, 1947, 1992
BstMAI	GTCTC	2 cut(s)	351, 773
BstMBI	GATC	6 cut(s)	740, 1104, 1147, 1879, 1944, 1989
BstMWI	GCNNNNNNNGC	9 cut(s)	233, 544, 905, 1688, 1772, 1799, 1823, 2015, 2024
BstNI	CCWGG	2 cut(s)	550, 573
BstNSI	RCATGY	3 cut(s)	993, 1439, 2022
BstSCI	CCNGG	3 cut(s)	548, 571, 1342
BstSFI	CTRYAG	3 cut(s)	471, 849, 1179
BstSLI	GKGCMC	2 cut(s)	147, 1003
BstSNI	TACGTA	1 cut(s)	1574
BstV1I	GCAGC	6 cut(s)	214, 236, 1537, 1759, 1838, 2021
BstV2I	GAAGAC	2 cut(s)	1866, 1963
BstX2I	RGATCY	1 cut(s)	740
BstXI	CCANNNNNNTGG	2 cut(s)	921, 1718
BstYI	RGATCY	1 cut(s)	740
BstZ17I	GTATAC	1 cut(s)	1355
Bsu15I	ATCGAT	1 cut(s)	18
Bsu36I	CCTNAGG	1 cut(s)	2066
BsuRI	GGCC	2 cut(s)	145, 290
BsuTUI	ATCGAT	1 cut(s)	18
BtgI	CCRYGG	3 cut(s)	1734, 1929, 2003
BtgZI	GCGATG	1 cut(s)	1965
BtrI	CACGTC	1 cut(s)	1660
BtsCI	GGATG	3 cut(s)	268, 559, 1313
BtsI	GCAGTG	1 cut(s)	1198
BtsIMutI	CAGTG	5 cut(s)	190, 333, 1001, 1198, 1364
Cac8I	GCNNGC	5 cut(s)	832, 1189, 1231, 1680, 2020
CaiI	CAGNNNCTG	1 cut(s)	335
CfoI	GCGC	2 cut(s)	213, 314
Cfr10I	RCCGGY	2 cut(s)	1678, 2012
Cfr13I	GGNCC	3 cut(s)	143, 144, 1531
ClaI	ATCGAT	1 cut(s)	18
Csp6I	GTAC	4 cut(s)	389, 576, 1936, 2074
CviQI	GTAC	4 cut(s)	389, 576, 1936, 2074
DdeI	CTNAG	6 cut(s)	65, 786, 1098, 1324, 1638, 2066
DpnI	GATC	6 cut(s)	742, 1106, 1149, 1881, 1946, 1991
DpnII	GATC	6 cut(s)	740, 1104, 1147, 1879, 1944, 1989
Eam1104I	CTCTTC	3 cut(s)	720, 1342, 2059
EarI	CTCTTC	3 cut(s)	720, 1342, 2059
Ecl136II	GAGCTC	2 cut(s)	713, 1097
Eco105I	TACGTA	1 cut(s)	1574
Eco130I	CCWWGG	4 cut(s)	858, 1734, 1929, 2003
Eco24I	GRGCYC	3 cut(s)	147, 715, 1099
Eco31I	GGTCTC	1 cut(s)	351
Eco32I	GATATC	1 cut(s)	16
Eco47I	GGWCC	1 cut(s)	1531
Eco47III	AGCGCT	1 cut(s)	212
Eco53kI	GAGCTC	2 cut(s)	713, 1097
Eco81I	CCTNAGG	1 cut(s)	2066
EcoICRI	GAGCTC	2 cut(s)	713, 1097
EcoO109I	RGGNCCY	1 cut(s)	144
EcoRII	CCWGG	2 cut(s)	548, 571
EcoRV	GATATC	1 cut(s)	16
EcoT14I	CCWWGG	4 cut(s)	858, 1734, 1929, 2003
EcoT22I	ATGCAT	1 cut(s)	2024
EcoT38I	GRGCYC	3 cut(s)	147, 715, 1099
ErhI	CCWWGG	4 cut(s)	858, 1734, 1929, 2003
FaqI	GGGAC	2 cut(s)	827, 1819
FauI	CCCGC	2 cut(s)	117, 1795
FauNDI	CATATG	1 cut(s)	1495
FblI	GTMKAC	1 cut(s)	1354
Fnu4HI	GCNGC	8 cut(s)	225, 228, 1551, 1773, 1827, 1962, 2000, 2010
FokI	GGATG	3 cut(s)	275, 566, 1320
FriOI	GRGCYC	3 cut(s)	147, 715, 1099
Fsp4HI	GCNGC	8 cut(s)	225, 228, 1551, 1773, 1827, 1962, 2000, 2010
FspAI	RTGCGCAY	1 cut(s)	313
FspBI	CTAG	3 cut(s)	831, 1188, 1769
FspI	TGCGCA	1 cut(s)	313
GlaI	GCGC	2 cut(s)	212, 313
GluI	GCNGC	8 cut(s)	225, 228, 1551, 1773, 1827, 1962, 2000, 2010
GsaI	CCCAGC	1 cut(s)	1988
GsuI	CTGGAG	3 cut(s)	428, 450, 915
HaeII	RGCGCY	1 cut(s)	214
HaeIII	GGCC	2 cut(s)	145, 290
HapII	CCGG	3 cut(s)	1344, 1679, 2013
HhaI	GCGC	2 cut(s)	213, 314
Hin6I	GCGC	2 cut(s)	211, 312
HinP1I	GCGC	2 cut(s)	211, 312
HincII	GTYRAC	1 cut(s)	870
HindII	GTYRAC	1 cut(s)	870
HinfI	GANTC	4 cut(s)	541, 1419, 1749, 1757
HpaII	CCGG	3 cut(s)	1344, 1679, 2013
HphI	GGTGA	4 cut(s)	170, 649, 656, 1754
Hpy166II	GTNNAC	4 cut(s)	870, 1001, 1196, 1355
Hpy188III	TCNNGA	6 cut(s)	133, 407, 445, 778, 1305, 1655
Hpy8I	GTNNAC	4 cut(s)	870, 1001, 1196, 1355
HpyAV	CCTTC	3 cut(s)	1266, 1493, 1559
HpyCH4III	ACNGT	4 cut(s)	751, 850, 1118, 1359
HpyCH4IV	ACGT	5 cut(s)	1573, 1659, 1836, 1863, 1920
HpyF10VI	GCNNNNNNNGC	9 cut(s)	233, 544, 905, 1688, 1772, 1799, 1823, 2015, 2024
HpyF3I	CTNAG	6 cut(s)	65, 786, 1098, 1324, 1638, 2066
HpySE526I	ACGT	5 cut(s)	1573, 1659, 1836, 1863, 1920
HspAI	GCGC	2 cut(s)	211, 312
KpnI	GGTACC	1 cut(s)	579
KroI	GCCGGC	1 cut(s)	1678
KroNI	GCCGGC	1 cut(s)	1680
Kzo9I	GATC	6 cut(s)	740, 1104, 1147, 1879, 1944, 1989
LguI	GCTCTTC	2 cut(s)	720, 2059
LmnI	GCTCC	7 cut(s)	469, 710, 805, 896, 905, 930, 2067
Lsp1109I	GCAGC	6 cut(s)	214, 236, 1537, 1759, 1838, 2021
LweI	GCATC	5 cut(s)	427, 520, 1072, 1261, 1309
MaeI	CTAG	3 cut(s)	831, 1188, 1769
MaeII	ACGT	5 cut(s)	1573, 1659, 1836, 1863, 1920
MaeIII	GTNAC	7 cut(s)	123, 331, 637, 727, 1261, 1600, 1742
MalI	GATC	6 cut(s)	742, 1106, 1149, 1881, 1946, 1991
MboI	GATC	6 cut(s)	740, 1104, 1147, 1879, 1944, 1989
MboII	GAAGA	9 cut(s)	560, 707, 1114, 1359, 1475, 1871, 1963, 1966, 2046
MfeI	CAATTG	2 cut(s)	1794, 1818
MflI	RGATCY	1 cut(s)	740
MhlI	GDGCHC	4 cut(s)	147, 715, 1003, 1099
MlyI	GAGTC	1 cut(s)	1751
MmeI	TCCRAC	2 cut(s)	374, 718
Mph1103I	ATGCAT	1 cut(s)	2024
MroNI	GCCGGC	1 cut(s)	1678
MroXI	GAANNNNTTC	2 cut(s)	212, 247
MseI	TTAA	6 cut(s)	482, 560, 755, 768, 1164, 1508
MslI	CAYNNNNRTG	1 cut(s)	2027
MspA1I	CMGCKG	2 cut(s)	227, 1829
MspI	CCGG	3 cut(s)	1344, 1679, 2013
MspR9I	CCNGG	3 cut(s)	550, 573, 1344
MunI	CAATTG	2 cut(s)	1794, 1818
Mva1269I	GAATGC	1 cut(s)	1650
MvaI	CCWGG	2 cut(s)	550, 573
MwoI	GCNNNNNNNGC	9 cut(s)	233, 544, 905, 1688, 1772, 1799, 1823, 2015, 2024
NaeI	GCCGGC	1 cut(s)	1680
NciI	CCSGG	1 cut(s)	1344
NcoI	CCATGG	3 cut(s)	1734, 1929, 2003
NdeI	CATATG	1 cut(s)	1495
NdeII	GATC	6 cut(s)	740, 1104, 1147, 1879, 1944, 1989
NgoMIV	GCCGGC	1 cut(s)	1678
NheI	GCTAGC	2 cut(s)	830, 1187
NlaIV	GGNNCC	6 cut(s)	145, 577, 742, 898, 926, 1533
NmuCI	GTSAC	3 cut(s)	331, 637, 1742
NsbI	TGCGCA	1 cut(s)	313
NsiI	ATGCAT	1 cut(s)	2024
NspI	RCATGY	3 cut(s)	993, 1439, 2022
PaeI	GCATGC	1 cut(s)	2022
PasI	CCCWGGG	1 cut(s)	549
PciI	ACATGT	1 cut(s)	1435
PciSI	GCTCTTC	2 cut(s)	720, 2059
PcsI	WCGNNNNNNNCGW	1 cut(s)	1139
PctI	GAATGC	1 cut(s)	1650
PdiI	GCCGGC	1 cut(s)	1680
PdmI	GAANNNNTTC	2 cut(s)	212, 247
PfeI	GAWTC	3 cut(s)	541, 1419, 1749
PflMI	CCANNNNNTGG	1 cut(s)	1144
PkrI	GCNGC	8 cut(s)	226, 229, 1552, 1774, 1828, 1963, 2001, 2011
PleI	GAGTC	1 cut(s)	1751
PpsI	GAGTC	1 cut(s)	1751
Ppu21I	YACGTR	3 cut(s)	1574, 1837, 1921
PscI	ACATGT	1 cut(s)	1435
PshBI	ATTAAT	1 cut(s)	768
Psp124BI	GAGCTC	2 cut(s)	715, 1099
Psp6I	CCWGG	2 cut(s)	548, 571
PspFI	CCCAGC	1 cut(s)	1984
PspGI	CCWGG	2 cut(s)	548, 571
PspN4I	GGNNCC	6 cut(s)	145, 577, 742, 898, 926, 1533
PspOMI	GGGCCC	1 cut(s)	143
PspPI	GGNCC	3 cut(s)	143, 144, 1531
PstI	CTGCAG	1 cut(s)	1183
PstNI	CAGNNNCTG	1 cut(s)	335
PsuI	RGATCY	1 cut(s)	740
PvuII	CAGCTG	2 cut(s)	227, 1829
RsaI	GTAC	4 cut(s)	390, 577, 1937, 2075
RsaNI	GTAC	4 cut(s)	389, 576, 1936, 2074
RseI	CAYNNNNRTG	1 cut(s)	2027
SacI	GAGCTC	2 cut(s)	715, 1099
SapI	GCTCTTC	2 cut(s)	720, 2059
SaqAI	TTAA	6 cut(s)	482, 560, 755, 768, 1164, 1508
SatI	GCNGC	8 cut(s)	225, 228, 1551, 1773, 1827, 1962, 2000, 2010
Sau3AI	GATC	6 cut(s)	740, 1104, 1147, 1879, 1944, 1989
Sau96I	GGNCC	3 cut(s)	143, 144, 1531
SchI	GAGTC	1 cut(s)	1751
ScrFI	CCNGG	3 cut(s)	550, 573, 1344
SduI	GDGCHC	4 cut(s)	147, 715, 1003, 1099
SfaNI	GCATC	5 cut(s)	427, 520, 1072, 1261, 1309
SfcI	CTRYAG	3 cut(s)	471, 849, 1179
SinI	GGWCC	1 cut(s)	1531
SmiMI	CAYNNNNRTG	1 cut(s)	2027
SmlI	CTYRAG	1 cut(s)	1885
SmoI	CTYRAG	1 cut(s)	1885
SnaBI	TACGTA	1 cut(s)	1574
SphI	GCATGC	1 cut(s)	2022
SsiI	CCGC	6 cut(s)	110, 1529, 1802, 1962, 2000, 2094
SspMI	CTAG	3 cut(s)	831, 1188, 1769
SstI	GAGCTC	2 cut(s)	715, 1099
StyD4I	CCNGG	3 cut(s)	548, 571, 1342
StyI	CCWWGG	4 cut(s)	858, 1734, 1929, 2003
TaaI	ACNGT	4 cut(s)	751, 850, 1118, 1359
TaiI	ACGT	5 cut(s)	1576, 1662, 1839, 1866, 1923
TaqI	TCGA	6 cut(s)	18, 88, 777, 1142, 1422, 1909
TatI	WGTACW	1 cut(s)	388
TauI	GCSGC	2 cut(s)	1964, 2002
TfiI	GAWTC	3 cut(s)	541, 1419, 1749
Tru1I	TTAA	6 cut(s)	482, 560, 755, 768, 1164, 1508
Tru9I	TTAA	6 cut(s)	482, 560, 755, 768, 1164, 1508
TscAI	CASTG	5 cut(s)	190, 340, 1008, 1198, 1364
TseFI	GTSAC	3 cut(s)	331, 637, 1742
TseI	GCWGC	6 cut(s)	224, 227, 1550, 1772, 1826, 2009
Tsp45I	GTSAC	3 cut(s)	331, 637, 1742
TspDTI	ATGAA	5 cut(s)	36, 73, 666, 1512, 1695
TspGWI	ACGGA	3 cut(s)	1249, 1761, 1823
TspRI	CASTG	5 cut(s)	190, 340, 1008, 1198, 1364
Van91I	CCANNNNNTGG	1 cut(s)	1144
VneI	GTGCAC	1 cut(s)	999
VpaK11BI	GGWCC	1 cut(s)	1531
VspI	ATTAAT	1 cut(s)	768
XapI	RAATTY	4 cut(s)	673, 700, 812, 1157
XceI	RCATGY	3 cut(s)	993, 1439, 2022
XcmI	CCANNNNNNNNNTGG	1 cut(s)	976
XmiI	GTMKAC	1 cut(s)	1354
XmnI	GAANNNNTTC	2 cut(s)	212, 247
XspI	CTAG	3 cut(s)	831, 1188, 1769
Zsp2I	ATGCAT	1 cut(s)	2024

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.