Prupe.4G188800_v2.0.a1

Methionine gamma-lyase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
11232893 .. 11238310
5418 bp
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UTR
Exon/CDS
Intron
Prupe.4G188800.1

Sequence Viewer

Length: 1362 bp
ATGATGTGGGCCTTATCCTGCGCCACGTCTGCTTATCCTATGCTCACTCTCCGAGCTTCTTTACCCATGGCTACTACTCGTTCATGCTCTCCAGTCTCAGTCCCTACCAATCACCATTATCATCAGAAAGACTCTCCTTTTGTTCCAGAGGTTGCGGAAGCAGTGGACTCCTTGTATTCAGAGTTCAGAGCCGTGGATAATTTGGTGGCACACAATACAACCCGTGTTCTCAAAGCTTTCCAGAATGCTCGAGTTGGATCTCATCACTTCGCCGGATGCACTGGCTATGGTCATGATGAAGCCGGGGGACGTGAAGCGCTTGACCAAGCTTTTGCAGAAATTGTTGGGGCTGAATCTTCTATAGTTCGCTCACAGTTTTTTTCAGGAACTCATGCTATAACCTGTGCTTTATTTGCTTTTCTAAGGCCGGGGGATGAGCTTTTGGCAGTTGCTGGTCCTCCCTATGACACGCTAGAGGAAGTTATTGGAAAGAGAGACTCTCATGGGATGGGATCCTTGATAGATTTTGGTGTGAAATACCGTGAAGTTCCACTTGCTGAAAATGGTGGCCTTGACTGGGATGCGCTTATGCATGCTTTGAGACCTGAAACAAAATGTGCACTCATACAGAGGTCATGTGGTTATTCATGGCGTCAGAGTTTAAGTGTAGATGAGATAAAGCGAGCAATTAAGATAATTAAGACGCAGAATCCTAATTGCTTGGTCCTGGTTGATAATTGTTATGGTGAATTTGTGGAAAGCATTGAACCTCCAATGGTGGGTGCAGATTTAATTGCTGGCAGTTTGATAAAAAATCCTGGTGGAACTATATCACCATGCGGTGGATATGTTGCAGGGAAAGAAAAATGGGTAAAAGCAGCAGCAGCTCGTTTATCTGCACCTGGCCTTGGAGTTGATTGCGGCTCAACTCCTGGTGACATTATGCGAGCATTTTTCCAGGGTTTGTTCCTCTCACCTCAAATGGTAGGCGAAGCTATCAAGGGTACACTCCTAGTTGCTGAAGTTATGGCATCCAAAGGGTATAAGGTGCAGCCACTTCCTCGTGTTCCTCGTCATGACACAGTACAGGCCATACAGCTTGGAAGCCGGGAGCGTCTTCTTGCTTTCTGTGAGGCTGTACAGAGAAGCTCCCCAGTAGGTTCATTTACTAGACCAATTGCCGGTACAACTCCTGGATATGCATCAGAGGTGATCTTTGCTGATGGGACCTTCATTGATGGGAGTACAAGTGAGCTTTCATGTGATGGACCATTAAGAGAGCCATTTGCTGTATTTTGCCAGGGCGGCTCCCATTGGACTCAGTGGGGACTAGTTCTTGGAGAGGTTTTAAAAGCCATATGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

454

Amino Acids

48.61

Weight (kDa)

5.97

Isoelectric Point (pI)

36.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015573)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 842
AciI CCGC 4 cut(s) 155, 840, 921, 1305
AclWI GGATC 3 cut(s) 265, 507, 520
AcsI RAATTY 1 cut(s) 749
AcuI CTGAAG 1 cut(s) 1041
AcyI GRCGYC 1 cut(s) 652
AfaI GTAC 5 cut(s) 1006, 1086, 1140, 1186, 1246
AfeI AGCGCT 1 cut(s) 318
AfiI CCNNNNNNNGG 5 cut(s) 577, 779, 842, 908, 1181
AgsI TTSAA 1 cut(s) 767
AhlI ACTAGT 1 cut(s) 1330
AjiI CACGTC 2 cut(s) 27, 311
AjnI CCWGG 7 cut(s) 726, 817, 901, 931, 957, 1192, 1299
AluBI AGCT 9 cut(s) 56, 236, 329, 439, 887, 995, 1099, 1149, 1255
AluI AGCT 9 cut(s) 56, 236, 329, 439, 887, 995, 1099, 1149, 1255
Alw21I GWGCWC 1 cut(s) 622
Alw26I GTCTC 3 cut(s) 100, 489, 595
Alw44I GTGCAC 1 cut(s) 618
AlwI GGATC 3 cut(s) 265, 507, 520
AlwNI CAGNNNCTG 1 cut(s) 452
Ama87I CYCGRG 1 cut(s) 249
Aor51HI AGCGCT 1 cut(s) 318
AoxI GGCC 5 cut(s) 9, 425, 568, 904, 1089
ApaLI GTGCAC 1 cut(s) 618
ApeKI GCWGC 4 cut(s) 878, 881, 884, 1051
ApoI RAATTY 1 cut(s) 749
ArsI GACNNNNNNTTYG 4 cut(s) 122, 154, 314, 346
AspLEI GCGC 3 cut(s) 23, 319, 586
AspS9I GGNCC 5 cut(s) 9, 455, 724, 1227, 1268
AsuC2I CCSGG 3 cut(s) 304, 429, 1109
AsuHPI GGTGA 6 cut(s) 104, 758, 825, 947, 966, 1222
AvaI CYCGRG 1 cut(s) 249
AvaII GGWCC 4 cut(s) 455, 724, 1227, 1268
BaeGI GKGCMC 1 cut(s) 622
BamHI GGATCC 1 cut(s) 512
BauI CACGAG 1 cut(s) 1062
BbsI GAAGAC 1 cut(s) 1109
Bbv12I GWGCWC 1 cut(s) 622
BbvI GCAGC 4 cut(s) 890, 893, 896, 1063
BccI CCATC 4 cut(s) 502, 1217, 1232, 1259
BceAI ACGGC 1 cut(s) 176
BciT130I CCWGG 7 cut(s) 728, 819, 903, 933, 959, 1194, 1301
BcnI CCSGG 3 cut(s) 304, 429, 1109
BcoDI GTCTC 3 cut(s) 100, 489, 595
BcuI ACTAGT 1 cut(s) 1330
BfaI CTAG 4 cut(s) 473, 1013, 1170, 1331
BfmI CTRYAG 1 cut(s) 360
BfoI RGCGCY 1 cut(s) 320
BglI GCCNNNNNGGC 1 cut(s) 1305
BisI GCNGC 6 cut(s) 879, 882, 885, 922, 1052, 1306
BlsI GCNGC 6 cut(s) 880, 883, 886, 923, 1053, 1307
Bme18I GGWCC 4 cut(s) 455, 724, 1227, 1268
BmeT110I CYCGRG 1 cut(s) 249
BmgBI CACGTC 2 cut(s) 27, 311
BmgT120I GGNCC 5 cut(s) 9, 455, 724, 1227, 1268
BmiI GGNNCC 3 cut(s) 514, 1228, 1309
BmrI ACTGGG 2 cut(s) 586, 1148
BmsI GCATC 4 cut(s) 266, 571, 1040, 1211
BmuI ACTGGG 2 cut(s) 586, 1148
BpiI GAAGAC 1 cut(s) 1109
BplI GAGNNNNNCTC 2 cut(s) 484, 516
BpmI CTGGAG 1 cut(s) 75
BpuMI CCSGG 3 cut(s) 304, 429, 1109
BsaBI GATNNNNATC 1 cut(s) 1201
BsaHI GRCGYC 1 cut(s) 652
BsaI GGTCTC 1 cut(s) 595
BsaJI CCNNGG 7 cut(s) 66, 192, 303, 428, 907, 958, 1300
BsaXI ACNNNNNCTCC 2 cut(s) 1234, 1264
Bsc4I CCNNNNNNNGG 5 cut(s) 577, 779, 842, 908, 1181
Bse118I RCCGGY 1 cut(s) 1181
Bse1I ACTGG 4 cut(s) 92, 286, 581, 1154
Bse8I GATNNNNATC 1 cut(s) 1201
BseBI CCWGG 7 cut(s) 728, 819, 903, 933, 959, 1194, 1301
BseDI CCNNGG 7 cut(s) 66, 192, 303, 428, 907, 958, 1300
BseGI GGATG 5 cut(s) 281, 439, 513, 586, 1031
BseJI GATNNNNATC 1 cut(s) 1201
BseLI CCNNNNNNNGG 5 cut(s) 577, 779, 842, 908, 1181
BseMII CTCAG 2 cut(s) 111, 1334
BseNI ACTGG 4 cut(s) 92, 286, 581, 1154
BseSI GKGCMC 1 cut(s) 622
BseXI GCAGC 4 cut(s) 890, 893, 896, 1063
BsgI GTGCAG 3 cut(s) 804, 882, 1070
BshFI GGCC 5 cut(s) 11, 427, 570, 906, 1091
BsiHKAI GWGCWC 1 cut(s) 622
BsiHKCI CYCGRG 1 cut(s) 249
BsiSI CCGG 5 cut(s) 273, 303, 428, 1108, 1182
BslFI GGGAC 4 cut(s) 86, 321, 1240, 1341
BslI CCNNNNNNNGG 5 cut(s) 577, 779, 842, 908, 1181
BsmAI GTCTC 3 cut(s) 100, 489, 595
BsmFI GGGAC 4 cut(s) 86, 321, 1240, 1341
BsmI GAATGC 1 cut(s) 250
BsnI GGCC 5 cut(s) 11, 427, 570, 906, 1091
Bso31I GGTCTC 1 cut(s) 595
BsoBI CYCGRG 1 cut(s) 249
Bsp1286I GDGCHC 1 cut(s) 622
Bsp1407I TGTACA 1 cut(s) 1138
Bsp143I GATC 3 cut(s) 257, 512, 1212
Bsp19I CCATGG 1 cut(s) 66
BspACI CCGC 4 cut(s) 155, 840, 921, 1305
BspANI GGCC 5 cut(s) 11, 427, 570, 906, 1091
BspCNI CTCAG 2 cut(s) 110, 1333
BspHI TCATGA 2 cut(s) 292, 1075
BspLI GGNNCC 3 cut(s) 514, 1228, 1309
BspPI GGATC 3 cut(s) 265, 507, 520
BspTNI GGTCTC 1 cut(s) 595
BsrFI RCCGGY 1 cut(s) 1181
BsrGI TGTACA 1 cut(s) 1138
BsrI ACTGG 4 cut(s) 92, 286, 581, 1154
BssAI RCCGGY 1 cut(s) 1181
BssECI CCNNGG 7 cut(s) 66, 192, 303, 428, 907, 958, 1300
BssMI GATC 3 cut(s) 257, 512, 1212
BssNI GRCGYC 1 cut(s) 652
BssSI CACGAG 1 cut(s) 1062
BssT1I CCWWGG 2 cut(s) 66, 907
Bst2BI CACGAG 1 cut(s) 1062
Bst2UI CCWGG 7 cut(s) 728, 819, 903, 933, 959, 1194, 1301
Bst4CI ACNGT 3 cut(s) 375, 542, 1084
BstACI GRCGYC 1 cut(s) 652
BstAUI TGTACA 1 cut(s) 1138
BstC8I GCNNGC 4 cut(s) 594, 684, 799, 948
BstDEI CTNAG 3 cut(s) 97, 422, 1320
BstDSI CCRYGG 2 cut(s) 66, 192
BstF5I GGATG 5 cut(s) 281, 439, 513, 586, 1031
BstH2I RGCGCY 1 cut(s) 320
BstHHI GCGC 3 cut(s) 23, 319, 586
BstKTI GATC 3 cut(s) 260, 515, 1215
BstMAI GTCTC 3 cut(s) 100, 489, 595
BstMBI GATC 3 cut(s) 257, 512, 1212
BstMWI GCNNNNNNNGC 4 cut(s) 29, 413, 884, 1305
BstNI CCWGG 7 cut(s) 728, 819, 903, 933, 959, 1194, 1301
BstNSI RCATGY 1 cut(s) 596
BstSFI CTRYAG 1 cut(s) 360
BstSLI GKGCMC 1 cut(s) 622
BstV1I GCAGC 4 cut(s) 890, 893, 896, 1063
BstV2I GAAGAC 1 cut(s) 1109
BstX2I RGATCY 2 cut(s) 257, 512
BstYI RGATCY 2 cut(s) 257, 512
BsuRI GGCC 5 cut(s) 11, 427, 570, 906, 1091
BtgI CCRYGG 2 cut(s) 66, 192
BtrI CACGTC 2 cut(s) 27, 311
BtsCI GGATG 5 cut(s) 281, 439, 513, 586, 1031
BtsI GCAGTG 1 cut(s) 168
BtsIMutI CAGTG 3 cut(s) 168, 279, 1328
Cac8I GCNNGC 4 cut(s) 594, 684, 799, 948
CaiI CAGNNNCTG 1 cut(s) 452
CciI TCATGA 2 cut(s) 292, 1075
CfoI GCGC 3 cut(s) 23, 319, 586
Cfr10I RCCGGY 1 cut(s) 1181
Cfr13I GGNCC 5 cut(s) 9, 455, 724, 1227, 1268
CseI GACGC 3 cut(s) 641, 712, 1103
Csp6I GTAC 5 cut(s) 1005, 1085, 1139, 1185, 1245
CviQI GTAC 5 cut(s) 1005, 1085, 1139, 1185, 1245
DdeI CTNAG 3 cut(s) 97, 422, 1320
DpnI GATC 3 cut(s) 259, 514, 1214
DpnII GATC 3 cut(s) 257, 512, 1212
DraI TTTAAA 1 cut(s) 1350
Eco130I CCWWGG 2 cut(s) 66, 907
Eco31I GGTCTC 1 cut(s) 595
Eco47I GGWCC 4 cut(s) 455, 724, 1227, 1268
Eco47III AGCGCT 1 cut(s) 318
Eco57I CTGAAG 1 cut(s) 1041
Eco88I CYCGRG 1 cut(s) 249
EcoO109I RGGNCCY 1 cut(s) 1227
EcoRII CCWGG 7 cut(s) 726, 817, 901, 931, 957, 1192, 1299
EcoT14I CCWWGG 2 cut(s) 66, 907
EcoT22I ATGCAT 2 cut(s) 594, 1204
ErhI CCWWGG 2 cut(s) 66, 907
FalI AAGNNNNNCTT 2 cut(s) 537, 569
FaqI GGGAC 4 cut(s) 86, 321, 1240, 1341
FauNDI CATATG 1 cut(s) 1358
Fnu4HI GCNGC 6 cut(s) 879, 882, 885, 922, 1052, 1306
FokI GGATG 5 cut(s) 288, 446, 520, 593, 1018
Fsp4HI GCNGC 6 cut(s) 879, 882, 885, 922, 1052, 1306
FspBI CTAG 4 cut(s) 473, 1013, 1170, 1331
GlaI GCGC 3 cut(s) 22, 318, 585
GluI GCNGC 6 cut(s) 879, 882, 885, 922, 1052, 1306
GsuI CTGGAG 1 cut(s) 75
HaeII RGCGCY 1 cut(s) 320
HaeIII GGCC 5 cut(s) 11, 427, 570, 906, 1091
HapII CCGG 5 cut(s) 273, 303, 428, 1108, 1182
HgaI GACGC 3 cut(s) 641, 712, 1103
HhaI GCGC 3 cut(s) 23, 319, 586
Hin1I GRCGYC 1 cut(s) 652
Hin6I GCGC 3 cut(s) 21, 317, 584
HinP1I GCGC 3 cut(s) 21, 317, 584
HindIII AAGCTT 2 cut(s) 234, 327
HinfI GANTC 6 cut(s) 131, 167, 353, 497, 709, 1318
HpaII CCGG 5 cut(s) 273, 303, 428, 1108, 1182
HphI GGTGA 6 cut(s) 104, 758, 825, 947, 966, 1222
Hpy166II GTNNAC 3 cut(s) 166, 620, 1007
Hpy188I TCNGA 6 cut(s) 53, 126, 181, 188, 657, 1207
Hpy188III TCNNGA 5 cut(s) 146, 241, 293, 384, 1076
Hpy8I GTNNAC 3 cut(s) 166, 620, 1007
HpyAV CCTTC 1 cut(s) 1240
HpyCH4III ACNGT 3 cut(s) 375, 542, 1084
HpyCH4IV ACGT 2 cut(s) 26, 310
HpyCH4V TGCA 9 cut(s) 279, 335, 592, 620, 785, 854, 899, 1051, 1202
HpyF10VI GCNNNNNNNGC 4 cut(s) 29, 413, 884, 1305
HpyF3I CTNAG 3 cut(s) 97, 422, 1320
HpySE526I ACGT 2 cut(s) 26, 310
Hsp92I GRCGYC 1 cut(s) 652
HspAI GCGC 3 cut(s) 21, 317, 584
Kzo9I GATC 3 cut(s) 257, 512, 1212
LmnI GCTCC 3 cut(s) 1111, 1154, 1313
Lsp1109I GCAGC 4 cut(s) 890, 893, 896, 1063
LweI GCATC 4 cut(s) 266, 571, 1040, 1211
MaeI CTAG 4 cut(s) 473, 1013, 1170, 1331
MaeII ACGT 2 cut(s) 26, 310
MaeIII GTNAC 1 cut(s) 935
MalI GATC 3 cut(s) 259, 514, 1214
MboI GATC 3 cut(s) 257, 512, 1212
MboII GAAGA 2 cut(s) 348, 1109
MfeI CAATTG 1 cut(s) 1176
MflI RGATCY 2 cut(s) 257, 512
MhlI GDGCHC 1 cut(s) 622
MluCI AATT 9 cut(s) 199, 339, 687, 696, 715, 736, 749, 792, 1176
MlyI GAGTC 4 cut(s) 125, 161, 491, 1312
MmeI TCCRAC 1 cut(s) 235
Mph1103I ATGCAT 2 cut(s) 594, 1204
MseI TTAA 6 cut(s) 662, 690, 699, 791, 1274, 1349
MspI CCGG 5 cut(s) 273, 303, 428, 1108, 1182
MunI CAATTG 1 cut(s) 1176
Mva1269I GAATGC 1 cut(s) 250
MvaI CCWGG 7 cut(s) 728, 819, 903, 933, 959, 1194, 1301
MwoI GCNNNNNNNGC 4 cut(s) 29, 413, 884, 1305
NciI CCSGG 3 cut(s) 304, 429, 1109
NcoI CCATGG 1 cut(s) 66
NdeI CATATG 1 cut(s) 1358
NdeII GATC 3 cut(s) 257, 512, 1212
NlaIV GGNNCC 3 cut(s) 514, 1228, 1309
NmuCI GTSAC 1 cut(s) 935
NsiI ATGCAT 2 cut(s) 594, 1204
NspI RCATGY 1 cut(s) 596
PaeI GCATGC 1 cut(s) 596
PaeR7I CTCGAG 1 cut(s) 249
PagI TCATGA 2 cut(s) 292, 1075
PcsI WCGNNNNNNNCGW 1 cut(s) 1069
PctI GAATGC 1 cut(s) 250
PfeI GAWTC 2 cut(s) 353, 709
PflMI CCANNNNNTGG 1 cut(s) 842
PfoI TCCNGGA 1 cut(s) 1192
PkrI GCNGC 6 cut(s) 880, 883, 886, 923, 1053, 1307
PleI GAGTC 4 cut(s) 125, 161, 491, 1312
PpsI GAGTC 4 cut(s) 125, 161, 491, 1312
PpuMI RGGWCCY 1 cut(s) 1227
Psp5II RGGWCCY 1 cut(s) 1227
Psp6I CCWGG 7 cut(s) 726, 817, 901, 931, 957, 1192, 1299
PspGI CCWGG 7 cut(s) 726, 817, 901, 931, 957, 1192, 1299
PspN4I GGNNCC 3 cut(s) 514, 1228, 1309
PspPI GGNCC 5 cut(s) 9, 455, 724, 1227, 1268
PspPPI RGGWCCY 1 cut(s) 1227
PspXI VCTCGAGB 1 cut(s) 249
PsrI GAACNNNNNNTAC 2 cut(s) 167, 199
PstNI CAGNNNCTG 1 cut(s) 452
PsuI RGATCY 2 cut(s) 257, 512
RsaI GTAC 5 cut(s) 1006, 1086, 1140, 1186, 1246
RsaNI GTAC 5 cut(s) 1005, 1085, 1139, 1185, 1245
SaqAI TTAA 6 cut(s) 662, 690, 699, 791, 1274, 1349
SatI GCNGC 6 cut(s) 879, 882, 885, 922, 1052, 1306
Sau3AI GATC 3 cut(s) 257, 512, 1212
Sau96I GGNCC 5 cut(s) 9, 455, 724, 1227, 1268
SchI GAGTC 4 cut(s) 125, 161, 491, 1312
SduI GDGCHC 1 cut(s) 622
SfaNI GCATC 4 cut(s) 266, 571, 1040, 1211
SfcI CTRYAG 1 cut(s) 360
Sfr274I CTCGAG 1 cut(s) 249
SinI GGWCC 4 cut(s) 455, 724, 1227, 1268
SlaI CTCGAG 1 cut(s) 249
SmlI CTYRAG 1 cut(s) 249
SmoI CTYRAG 1 cut(s) 249
SpeI ACTAGT 1 cut(s) 1330
SphI GCATGC 1 cut(s) 596
Sse9I AATT 9 cut(s) 199, 339, 687, 696, 715, 736, 749, 792, 1176
SsiI CCGC 4 cut(s) 155, 840, 921, 1305
SspMI CTAG 4 cut(s) 473, 1013, 1170, 1331
StyI CCWWGG 2 cut(s) 66, 907
TaaI ACNGT 3 cut(s) 375, 542, 1084
TaiI ACGT 2 cut(s) 29, 313
TaqI TCGA 1 cut(s) 250
TasI AATT 9 cut(s) 199, 339, 687, 696, 715, 736, 749, 792, 1176
TatI WGTACW 3 cut(s) 1084, 1138, 1244
TauI GCSGC 2 cut(s) 924, 1308
TfiI GAWTC 2 cut(s) 353, 709
Tru1I TTAA 6 cut(s) 662, 690, 699, 791, 1274, 1349
Tru9I TTAA 6 cut(s) 662, 690, 699, 791, 1274, 1349
TscAI CASTG 3 cut(s) 168, 286, 1328
TseFI GTSAC 1 cut(s) 935
TseI GCWGC 4 cut(s) 878, 881, 884, 1051
Tsp45I GTSAC 1 cut(s) 935
TspDTI ATGAA 6 cut(s) 72, 312, 636, 1152, 1222, 1248
TspRI CASTG 3 cut(s) 168, 286, 1328
Van91I CCANNNNNTGG 1 cut(s) 842
VneI GTGCAC 1 cut(s) 618
VpaK11BI GGWCC 4 cut(s) 455, 724, 1227, 1268
XapI RAATTY 1 cut(s) 749
XceI RCATGY 1 cut(s) 596
XhoI CTCGAG 1 cut(s) 249
XspI CTAG 4 cut(s) 473, 1013, 1170, 1331
Zsp2I ATGCAT 2 cut(s) 594, 1204
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.