Prupe.4G217900_v2.0.a1
WRKY Family

WRKY Transcription Factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
13677276 .. 13680167
2892 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G217900.1

Sequence Viewer

Length: 1641 bp
ATGGAATCTGCAGCTAGGGATCATTCGATTCACAACTGCAGATCAATCGAGCAGCCTCTACTTTCTCCGGAAACAGCCGTTGATCACGATCATCACGGGAAGCGGATTGTTGATGAGTTGGACTTCTTTGCTGATAACAAGGGTCGTCTGATGGAAATGAGAGATCAGACGGTTGAGGTTAAAGAAGAAGGCGCACATGATCATCACGGCGTTGGTCAAGAAAAGCAACTACCCGACGTAAATACTGGTTTAAATCTTCTCACAACATACACCAGTAGCGACAAATCATCCATGGATGATGGAACTTCATCGTTCCATAATATGGAAGACAAGCATAGAACAAATGAGTTGGCAGTTCTTCAAGCTGAATTAGGCCGTATGAGTGTAGAAAATCAACGGTTGAGAGTTATGATTAGCCAGGTGAACAACAATTACCAGGCATTACAGGTGCAAATTGTGACACTGATGCAACGCCAGCAAAATCAAAAGGCTGATCATCAAACTCCAGAACAACACAAGATGATCAATAATGGATCAGTCGTGGTAGAAGAGAAGCAGATGATGAACGGGTTCAACCATATTGTTCCAAGGCAATTTATGGATATGGGCAGGGCTGAGAAAGATGAGCTTTCACAGTGCTCTTTGGAAGGCTGCAGATCCCAAGATTGTTCCGGGTCGCCTCCACGAAACGACATCGTTGAGTCAATGGAGTGCGGCAAGAGTACTAGTCATGTACTTCACAGGGATCTTAGTGGAAGAATTAGTACTACTAATGGAGGAGAAGATAGCCCTGACCAAGAGTTTCAAGGGTGGGTTCCTAAGAAAGTGTCCAAGATGATGAGTCCCAGGGACGTGGATCAAGCCTCATCAGAAACCATGTCCATGATTAAGAAAGCCCGCGTTTCTGTTCGCGCACGATCTGAAGCGTCCATGATATCTGATGGATGCCAATGGAGAAAGTATGGTCAGAAAATGGCTAAAGGAAACCCATGCCCTCGAGCTTATTATCGTTGTACCATGGGAACTGGTTGCCCAGTTCGCAAACAGGTACAAAGATGTGCAGAAGACCGAACAATACTTGTAACGACCTACGAAGGCCACCACAACCATCCACTCCCTCCTGCTGCAATGGCAATGGCGTCTACAACATCAGCAGCAGCATCAATGCTACTATCAGGCTCAATGCCTAGTGCTGATGGCCTAATAAGCTCAAACAGCTTCCTGGCAAGAAGTGCCCTACCAAACTGCCCACCAAGTTTGGCAACACTCTCAGCTTCAGCTCCATTTCCCACTGTCACATTGGACCTCACTCGAACTCCAACTTCCTCAGAGATGCCACTTGGCCAGCCAAACCAGCTGCCTCCAAGTTTTCCTCAAAACATGATGTCTGTGCCACAAATTCTAGGTCAAGCCCTTTCCAGCCAATCGAAATTCTCGGTTCTCGATAGCTTTCAGGGATTGGATAGCGCTACACACTCATTGGCTGACAAAGTCAATGCAGCTACAGCGGCCATCACTGCTGACCCTAACTTCACAGCGGCTCTGGTAGCAGCCATCACCTCTATCGTTGGCAATGTTCATTCAAACAATAATACCAACAACAATGTTACAACAAGAAACAATAGTGATAGCAATACATGA

Protein Analysis

547

Amino Acids

59.73

Weight (kDa)

6.13

Isoelectric Point (pI)

44.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013643)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 322
AccI GTMKAC 1 cut(s) 1142
AccII CGCG 2 cut(s) 900, 912
AccIII TCCGGA 1 cut(s) 67
AciI CCGC 5 cut(s) 103, 714, 898, 1508, 1538
AclWI GGATC 5 cut(s) 27, 541, 651, 753, 864
AcoI YGGCCR 2 cut(s) 1342, 1509
AcsI RAATTY 2 cut(s) 1398, 1430
AcuI CTGAAG 2 cut(s) 942, 1260
AcyI GRCGYC 1 cut(s) 1139
AfaI GTAC 5 cut(s) 724, 735, 766, 1015, 1050
AfeI AGCGCT 1 cut(s) 1468
AfiI CCNNNNNNNGG 1 cut(s) 322
AgsI TTSAA 4 cut(s) 362, 574, 806, 1584
AhlI ACTAGT 1 cut(s) 725
AjiI CACGTC 1 cut(s) 853
AjnI CCWGG 4 cut(s) 417, 435, 845, 1221
Alw21I GWGCWC 1 cut(s) 641
AlwI GGATC 5 cut(s) 27, 541, 651, 753, 864
Ama87I CYCGRG 1 cut(s) 996
Aor13HI TCCGGA 1 cut(s) 67
Aor51HI AGCGCT 1 cut(s) 1468
AoxI GGCC 5 cut(s) 373, 1096, 1198, 1342, 1509
ApeKI GCWGC 9 cut(s) 11, 52, 651, 1124, 1154, 1157, 1357, 1499, 1550
ApoI RAATTY 2 cut(s) 1398, 1430
ArsI GACNNNNNNTTYG 2 cut(s) 1390, 1422
Asp700I GAANNNNTTC 1 cut(s) 569
AspLEI GCGC 3 cut(s) 194, 914, 1469
AspS9I GGNCC 1 cut(s) 1303
AsuC2I CCSGG 1 cut(s) 673
AsuHPI GGTGA 2 cut(s) 433, 1549
AvaI CYCGRG 1 cut(s) 996
AvaII GGWCC 1 cut(s) 1303
BaeGI GKGCMC 1 cut(s) 1237
BalI TGGCCA 1 cut(s) 1344
BarI GAAGNNNNNNTAC 2 cut(s) 748, 780
BbsI GAAGAC 2 cut(s) 333, 1071
Bbv12I GWGCWC 1 cut(s) 641
BbvI GCAGC 9 cut(s) 23, 64, 638, 1111, 1166, 1169, 1344, 1511, 1562
BccI CCATC 7 cut(s) 145, 293, 935, 1116, 1190, 1520, 1562
BceAI ACGGC 3 cut(s) 62, 223, 360
BcgI CGANNNNNNTGC 2 cut(s) 28, 62
BciT130I CCWGG 4 cut(s) 419, 437, 847, 1223
BclI TGATCA 4 cut(s) 82, 199, 493, 522
BcnI CCSGG 1 cut(s) 673
BcuI ACTAGT 1 cut(s) 725
BfaI CTAG 4 cut(s) 15, 726, 1188, 1403
BfmI CTRYAG 4 cut(s) 9, 37, 652, 1503
BfoI RGCGCY 1 cut(s) 1470
BmcAI AGTACT 2 cut(s) 724, 766
Bme1390I CCNGG 5 cut(s) 419, 437, 673, 847, 1223
Bme18I GGWCC 1 cut(s) 1303
BmeT110I CYCGRG 1 cut(s) 996
BmgBI CACGTC 1 cut(s) 853
BmgT120I GGNCC 1 cut(s) 1303
BmiI GGNNCC 1 cut(s) 816
BmrFI CCNGG 5 cut(s) 419, 437, 673, 847, 1223
BmrI ACTGGG 1 cut(s) 1028
BmsI GCATC 4 cut(s) 456, 935, 1169, 1323
BmuI ACTGGG 1 cut(s) 1028
BpiI GAAGAC 2 cut(s) 333, 1071
BpmI CTGGAG 1 cut(s) 489
BpuMI CCSGG 1 cut(s) 673
BsaBI GATNNNNATC 1 cut(s) 87
BsaHI GRCGYC 1 cut(s) 1139
BsaJI CCNNGG 5 cut(s) 291, 587, 845, 846, 1017
BsaWI WCCGGW 1 cut(s) 67
BsaXI ACNNNNNCTCC 2 cut(s) 1300, 1330
Bsc4I CCNNNNNNNGG 1 cut(s) 322
Bse1I ACTGG 4 cut(s) 250, 273, 1030, 1034
Bse3DI GCAATG 3 cut(s) 1134, 1140, 1579
Bse8I GATNNNNATC 1 cut(s) 87
BseAI TCCGGA 1 cut(s) 67
BseBI CCWGG 4 cut(s) 419, 437, 847, 1223
BseDI CCNNGG 5 cut(s) 291, 587, 845, 846, 1017
BseGI GGATG 4 cut(s) 287, 301, 950, 1108
BseJI GATNNNNATC 1 cut(s) 87
BseLI CCNNNNNNNGG 1 cut(s) 322
BseMI GCAATG 3 cut(s) 1134, 1140, 1579
BseMII CTCAG 3 cut(s) 606, 1284, 1341
BseNI ACTGG 4 cut(s) 250, 273, 1030, 1034
BseRI GAGGAG 1 cut(s) 792
BseSI GKGCMC 1 cut(s) 1237
BseXI GCAGC 9 cut(s) 23, 64, 638, 1111, 1166, 1169, 1344, 1511, 1562
BsgI GTGCAG 1 cut(s) 1080
Bsh1236I CGCG 2 cut(s) 900, 912
BshFI GGCC 5 cut(s) 375, 1098, 1200, 1344, 1511
BsiHKAI GWGCWC 1 cut(s) 641
BsiHKCI CYCGRG 1 cut(s) 996
BsiSI CCGG 2 cut(s) 68, 672
BslFI GGGAC 2 cut(s) 828, 863
BslI CCNNNNNNNGG 1 cut(s) 322
BsmFI GGGAC 2 cut(s) 828, 863
BsnI GGCC 5 cut(s) 375, 1098, 1200, 1344, 1511
BsoBI CYCGRG 1 cut(s) 996
Bsp1286I GDGCHC 2 cut(s) 641, 1237
Bsp13I TCCGGA 1 cut(s) 67
Bsp19I CCATGG 2 cut(s) 291, 1017
BspACI CCGC 5 cut(s) 103, 714, 898, 1508, 1538
BspANI GGCC 5 cut(s) 375, 1098, 1200, 1344, 1511
BspCNI CTCAG 3 cut(s) 607, 1283, 1340
BspEI TCCGGA 1 cut(s) 67
BspFNI CGCG 2 cut(s) 900, 912
BspLI GGNNCC 1 cut(s) 816
BspMAI CTGCAG 3 cut(s) 13, 41, 656
BspPI GGATC 5 cut(s) 27, 541, 651, 753, 864
BsrDI GCAATG 3 cut(s) 1134, 1140, 1579
BsrI ACTGG 4 cut(s) 250, 273, 1030, 1034
BssECI CCNNGG 5 cut(s) 291, 587, 845, 846, 1017
BssNI GRCGYC 1 cut(s) 1139
BssT1I CCWWGG 3 cut(s) 291, 587, 1017
Bst2UI CCWGG 4 cut(s) 419, 437, 847, 1223
Bst4CI ACNGT 4 cut(s) 172, 399, 636, 1294
Bst6I CTCTTC 1 cut(s) 543
BstACI GRCGYC 1 cut(s) 1139
BstAPI GCANNNNNTGC 1 cut(s) 1232
BstC8I GCNNGC 3 cut(s) 476, 898, 1346
BstDEI CTNAG 5 cut(s) 615, 749, 819, 1270, 1327
BstDSI CCRYGG 2 cut(s) 291, 1017
BstF5I GGATG 4 cut(s) 287, 301, 950, 1108
BstFNI CGCG 2 cut(s) 900, 912
BstH2I RGCGCY 1 cut(s) 1470
BstHHI GCGC 3 cut(s) 194, 914, 1469
BstNI CCWGG 4 cut(s) 419, 437, 847, 1223
BstSCI CCNGG 5 cut(s) 417, 435, 671, 845, 1221
BstSFI CTRYAG 4 cut(s) 9, 37, 652, 1503
BstSLI GKGCMC 1 cut(s) 1237
BstUI CGCG 2 cut(s) 900, 912
BstV1I GCAGC 9 cut(s) 23, 64, 638, 1111, 1166, 1169, 1344, 1511, 1562
BstV2I GAAGAC 2 cut(s) 333, 1071
BstX2I RGATCY 2 cut(s) 656, 745
BstXI CCANNNNNNTGG 1 cut(s) 853
BstYI RGATCY 2 cut(s) 656, 745
BsuRI GGCC 5 cut(s) 375, 1098, 1200, 1344, 1511
BtgI CCRYGG 2 cut(s) 291, 1017
BtrI CACGTC 1 cut(s) 853
BtsCI GGATG 4 cut(s) 287, 301, 950, 1108
BtsI GCAGTG 1 cut(s) 1515
BtsIMutI CAGTG 4 cut(s) 461, 641, 1290, 1515
Cac8I GCNNGC 3 cut(s) 476, 898, 1346
CfoI GCGC 3 cut(s) 194, 914, 1469
Cfr13I GGNCC 1 cut(s) 1303
CseI GACGC 2 cut(s) 915, 1128
Csp6I GTAC 5 cut(s) 723, 734, 765, 1014, 1049
CspCI CAANNNNNGTGG 2 cut(s) 1239, 1274
CviQI GTAC 5 cut(s) 723, 734, 765, 1014, 1049
DdeI CTNAG 5 cut(s) 615, 749, 819, 1270, 1327
DraI TTTAAA 1 cut(s) 252
EaeI YGGCCR 2 cut(s) 1342, 1509
Eam1104I CTCTTC 1 cut(s) 543
EarI CTCTTC 1 cut(s) 543
Eco130I CCWWGG 3 cut(s) 291, 587, 1017
Eco32I GATATC 1 cut(s) 936
Eco47I GGWCC 1 cut(s) 1303
Eco47III AGCGCT 1 cut(s) 1468
Eco57I CTGAAG 2 cut(s) 942, 1260
Eco88I CYCGRG 1 cut(s) 996
EcoRII CCWGG 4 cut(s) 417, 435, 845, 1221
EcoRV GATATC 1 cut(s) 936
EcoT14I CCWWGG 3 cut(s) 291, 587, 1017
ErhI CCWWGG 3 cut(s) 291, 587, 1017
FalI AAGNNNNNCTT 2 cut(s) 612, 644
FaqI GGGAC 2 cut(s) 828, 863
FauI CCCGC 1 cut(s) 905
FbaI TGATCA 4 cut(s) 82, 199, 493, 522
FblI GTMKAC 1 cut(s) 1142
FokI GGATG 4 cut(s) 274, 308, 957, 1095
FspBI CTAG 4 cut(s) 15, 726, 1188, 1403
GlaI GCGC 3 cut(s) 193, 913, 1468
GsuI CTGGAG 1 cut(s) 489
HaeII RGCGCY 1 cut(s) 1470
HaeIII GGCC 5 cut(s) 375, 1098, 1200, 1344, 1511
HapII CCGG 2 cut(s) 68, 672
HgaI GACGC 2 cut(s) 915, 1128
HhaI GCGC 3 cut(s) 194, 914, 1469
Hin1I GRCGYC 1 cut(s) 1139
Hin6I GCGC 3 cut(s) 192, 912, 1467
HinP1I GCGC 3 cut(s) 192, 912, 1467
HinfI GANTC 4 cut(s) 5, 28, 701, 841
HpaII CCGG 2 cut(s) 68, 672
HphI GGTGA 2 cut(s) 433, 1549
Hpy166II GTNNAC 2 cut(s) 424, 1143
Hpy188I TCNGA 7 cut(s) 150, 168, 871, 922, 940, 969, 1330
Hpy188III TCNNGA 5 cut(s) 68, 86, 218, 506, 1442
Hpy8I GTNNAC 2 cut(s) 424, 1143
Hpy99I CGWCG 1 cut(s) 239
HpyAV CCTTC 3 cut(s) 182, 641, 1088
HpyCH4III ACNGT 4 cut(s) 172, 399, 636, 1294
HpyCH4IV ACGT 2 cut(s) 237, 852
HpyCH4V TGCA 8 cut(s) 11, 39, 451, 469, 654, 1061, 1127, 1499
HpyF3I CTNAG 5 cut(s) 615, 749, 819, 1270, 1327
HpySE526I ACGT 2 cut(s) 237, 852
Hsp92I GRCGYC 1 cut(s) 1139
HspAI GCGC 3 cut(s) 192, 912, 1467
Kpn2I TCCGGA 1 cut(s) 67
Ksp22I TGATCA 4 cut(s) 82, 199, 493, 522
LmnI GCTCC 1 cut(s) 1285
Lsp1109I GCAGC 9 cut(s) 23, 64, 638, 1111, 1166, 1169, 1344, 1511, 1562
LweI GCATC 4 cut(s) 456, 935, 1169, 1323
MaeI CTAG 4 cut(s) 15, 726, 1188, 1403
MaeII ACGT 2 cut(s) 237, 852
MaeIII GTNAC 4 cut(s) 457, 1081, 1294, 1606
MboII GAAGA 8 cut(s) 197, 248, 338, 350, 560, 768, 794, 1076
MflI RGATCY 2 cut(s) 656, 745
MhlI GDGCHC 2 cut(s) 641, 1237
MlsI TGGCCA 1 cut(s) 1344
MluCI AATT 7 cut(s) 368, 430, 453, 593, 759, 1398, 1430
MluNI TGGCCA 1 cut(s) 1344
MlyI GAGTC 2 cut(s) 710, 850
MmeI TCCRAC 2 cut(s) 99, 1343
Mox20I TGGCCA 1 cut(s) 1344
MroI TCCGGA 1 cut(s) 67
MroXI GAANNNNTTC 1 cut(s) 569
MscI TGGCCA 1 cut(s) 1344
MseI TTAA 3 cut(s) 180, 251, 888
MslI CAYNNNNRTG 1 cut(s) 881
Msp20I TGGCCA 1 cut(s) 1344
MspA1I CMGCKG 3 cut(s) 1357, 1508, 1538
MspI CCGG 2 cut(s) 68, 672
MspR9I CCNGG 5 cut(s) 419, 437, 673, 847, 1223
MvaI CCWGG 4 cut(s) 419, 437, 847, 1223
MvnI CGCG 2 cut(s) 900, 912
NciI CCSGG 1 cut(s) 673
NcoI CCATGG 2 cut(s) 291, 1017
NlaIV GGNNCC 1 cut(s) 816
NmuCI GTSAC 2 cut(s) 457, 1294
PaeR7I CTCGAG 1 cut(s) 996
PasI CCCWGGG 1 cut(s) 846
PdmI GAANNNNTTC 1 cut(s) 569
PfeI GAWTC 2 cut(s) 5, 28
PflFI GACNNNGTC 1 cut(s) 1490
PflMI CCANNNNNTGG 1 cut(s) 322
PleI GAGTC 2 cut(s) 709, 849
PpsI GAGTC 2 cut(s) 709, 849
Psp6I CCWGG 4 cut(s) 417, 435, 845, 1221
PspGI CCWGG 4 cut(s) 417, 435, 845, 1221
PspN4I GGNNCC 1 cut(s) 816
PspPI GGNCC 1 cut(s) 1303
PspXI VCTCGAGB 1 cut(s) 996
PsrI GAACNNNNNNTAC 2 cut(s) 416, 448
PstI CTGCAG 3 cut(s) 13, 41, 656
PsuI RGATCY 2 cut(s) 656, 745
PsyI GACNNNGTC 1 cut(s) 1490
PvuII CAGCTG 1 cut(s) 1357
RsaI GTAC 5 cut(s) 724, 735, 766, 1015, 1050
RsaNI GTAC 5 cut(s) 723, 734, 765, 1014, 1049
RseI CAYNNNNRTG 1 cut(s) 881
SaqAI TTAA 3 cut(s) 180, 251, 888
Sau96I GGNCC 1 cut(s) 1303
ScaI AGTACT 2 cut(s) 724, 766
SchI GAGTC 2 cut(s) 710, 850
ScrFI CCNGG 5 cut(s) 419, 437, 673, 847, 1223
SduI GDGCHC 2 cut(s) 641, 1237
SfaNI GCATC 4 cut(s) 456, 935, 1169, 1323
SfcI CTRYAG 4 cut(s) 9, 37, 652, 1503
Sfr274I CTCGAG 1 cut(s) 996
SinI GGWCC 1 cut(s) 1303
SlaI CTCGAG 1 cut(s) 996
SmiMI CAYNNNNRTG 1 cut(s) 881
SmlI CTYRAG 1 cut(s) 996
SmoI CTYRAG 1 cut(s) 996
SpeI ACTAGT 1 cut(s) 725
Sse9I AATT 7 cut(s) 368, 430, 453, 593, 759, 1398, 1430
SsiI CCGC 5 cut(s) 103, 714, 898, 1508, 1538
SspMI CTAG 4 cut(s) 15, 726, 1188, 1403
StyD4I CCNGG 5 cut(s) 417, 435, 671, 845, 1221
StyI CCWWGG 3 cut(s) 291, 587, 1017
TaaI ACNGT 4 cut(s) 172, 399, 636, 1294
TaiI ACGT 2 cut(s) 240, 855
TaqI TCGA 6 cut(s) 26, 48, 997, 1312, 1427, 1443
TaqII GACCGA 1 cut(s) 1083
TasI AATT 7 cut(s) 368, 430, 453, 593, 759, 1398, 1430
TatI WGTACW 3 cut(s) 722, 733, 764
TauI GCSGC 3 cut(s) 717, 1511, 1541
TfiI GAWTC 2 cut(s) 5, 28
Tru1I TTAA 3 cut(s) 180, 251, 888
Tru9I TTAA 3 cut(s) 180, 251, 888
TscAI CASTG 4 cut(s) 468, 641, 1297, 1522
TseFI GTSAC 2 cut(s) 457, 1294
TseI GCWGC 9 cut(s) 11, 52, 651, 1124, 1154, 1157, 1357, 1499, 1550
Tsp45I GTSAC 2 cut(s) 457, 1294
TspDTI ATGAA 3 cut(s) 297, 578, 1568
TspRI CASTG 4 cut(s) 468, 641, 1297, 1522
Tth111I GACNNNGTC 1 cut(s) 1490
Van91I CCANNNNNTGG 1 cut(s) 322
VpaK11BI GGWCC 1 cut(s) 1303
XapI RAATTY 2 cut(s) 1398, 1430
XcmI CCANNNNNNNNNTGG 1 cut(s) 1297
XhoI CTCGAG 1 cut(s) 996
XmiI GTMKAC 1 cut(s) 1142
XmnI GAANNNNTTC 1 cut(s) 569
XspI CTAG 4 cut(s) 15, 726, 1188, 1403
ZrmI AGTACT 2 cut(s) 724, 766
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.