WRKY Transcription Factor
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g23150 |
| malus_domestica | MD03G1197600.v1.1 MD11G1213500.v1.1 |
| prunus_persica | Prupe.4G217900_v2.0.a1 |
| pyrus_communis | pycom03g14910 pycom11g18810 pycom12g06880 |
| rosa_chinensis | RchiOBHm_Chr5g0040801 |
| rosa_laevigata | RLG00000034002 |
| rosa_multiflora | Rmu_sc0001579.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00039900 |
| rosa_rugosa | Rorug05G0187400 Rorug05G0187500 |
| rosa_samantha | Rh5AG273100 Rh5BG278200 Rh5CG310200 Rh5DG286100 |
| rosa_wichuraiana | Rw5G025680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 322 |
| AccI | GTMKAC | 1 cut(s) | 1142 |
| AccII | CGCG | 2 cut(s) | 900, 912 |
| AccIII | TCCGGA | 1 cut(s) | 67 |
| AciI | CCGC | 5 cut(s) | 103, 714, 898, 1508, 1538 |
| AclWI | GGATC | 5 cut(s) | 27, 541, 651, 753, 864 |
| AcoI | YGGCCR | 2 cut(s) | 1342, 1509 |
| AcsI | RAATTY | 2 cut(s) | 1398, 1430 |
| AcuI | CTGAAG | 2 cut(s) | 942, 1260 |
| AcyI | GRCGYC | 1 cut(s) | 1139 |
| AfaI | GTAC | 5 cut(s) | 724, 735, 766, 1015, 1050 |
| AfeI | AGCGCT | 1 cut(s) | 1468 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 322 |
| AgsI | TTSAA | 4 cut(s) | 362, 574, 806, 1584 |
| AhlI | ACTAGT | 1 cut(s) | 725 |
| AjiI | CACGTC | 1 cut(s) | 853 |
| AjnI | CCWGG | 4 cut(s) | 417, 435, 845, 1221 |
| Alw21I | GWGCWC | 1 cut(s) | 641 |
| AlwI | GGATC | 5 cut(s) | 27, 541, 651, 753, 864 |
| Ama87I | CYCGRG | 1 cut(s) | 996 |
| Aor13HI | TCCGGA | 1 cut(s) | 67 |
| Aor51HI | AGCGCT | 1 cut(s) | 1468 |
| AoxI | GGCC | 5 cut(s) | 373, 1096, 1198, 1342, 1509 |
| ApeKI | GCWGC | 9 cut(s) | 11, 52, 651, 1124, 1154, 1157, 1357, 1499, 1550 |
| ApoI | RAATTY | 2 cut(s) | 1398, 1430 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1390, 1422 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 569 |
| AspLEI | GCGC | 3 cut(s) | 194, 914, 1469 |
| AspS9I | GGNCC | 1 cut(s) | 1303 |
| AsuC2I | CCSGG | 1 cut(s) | 673 |
| AsuHPI | GGTGA | 2 cut(s) | 433, 1549 |
| AvaI | CYCGRG | 1 cut(s) | 996 |
| AvaII | GGWCC | 1 cut(s) | 1303 |
| BaeGI | GKGCMC | 1 cut(s) | 1237 |
| BalI | TGGCCA | 1 cut(s) | 1344 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 748, 780 |
| BbsI | GAAGAC | 2 cut(s) | 333, 1071 |
| Bbv12I | GWGCWC | 1 cut(s) | 641 |
| BbvI | GCAGC | 9 cut(s) | 23, 64, 638, 1111, 1166, 1169, 1344, 1511, 1562 |
| BccI | CCATC | 7 cut(s) | 145, 293, 935, 1116, 1190, 1520, 1562 |
| BceAI | ACGGC | 3 cut(s) | 62, 223, 360 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 28, 62 |
| BciT130I | CCWGG | 4 cut(s) | 419, 437, 847, 1223 |
| BclI | TGATCA | 4 cut(s) | 82, 199, 493, 522 |
| BcnI | CCSGG | 1 cut(s) | 673 |
| BcuI | ACTAGT | 1 cut(s) | 725 |
| BfaI | CTAG | 4 cut(s) | 15, 726, 1188, 1403 |
| BfmI | CTRYAG | 4 cut(s) | 9, 37, 652, 1503 |
| BfoI | RGCGCY | 1 cut(s) | 1470 |
| BmcAI | AGTACT | 2 cut(s) | 724, 766 |
| Bme1390I | CCNGG | 5 cut(s) | 419, 437, 673, 847, 1223 |
| Bme18I | GGWCC | 1 cut(s) | 1303 |
| BmeT110I | CYCGRG | 1 cut(s) | 996 |
| BmgBI | CACGTC | 1 cut(s) | 853 |
| BmgT120I | GGNCC | 1 cut(s) | 1303 |
| BmiI | GGNNCC | 1 cut(s) | 816 |
| BmrFI | CCNGG | 5 cut(s) | 419, 437, 673, 847, 1223 |
| BmrI | ACTGGG | 1 cut(s) | 1028 |
| BmsI | GCATC | 4 cut(s) | 456, 935, 1169, 1323 |
| BmuI | ACTGGG | 1 cut(s) | 1028 |
| BpiI | GAAGAC | 2 cut(s) | 333, 1071 |
| BpmI | CTGGAG | 1 cut(s) | 489 |
| BpuMI | CCSGG | 1 cut(s) | 673 |
| BsaBI | GATNNNNATC | 1 cut(s) | 87 |
| BsaHI | GRCGYC | 1 cut(s) | 1139 |
| BsaJI | CCNNGG | 5 cut(s) | 291, 587, 845, 846, 1017 |
| BsaWI | WCCGGW | 1 cut(s) | 67 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1300, 1330 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 322 |
| Bse1I | ACTGG | 4 cut(s) | 250, 273, 1030, 1034 |
| Bse3DI | GCAATG | 3 cut(s) | 1134, 1140, 1579 |
| Bse8I | GATNNNNATC | 1 cut(s) | 87 |
| BseAI | TCCGGA | 1 cut(s) | 67 |
| BseBI | CCWGG | 4 cut(s) | 419, 437, 847, 1223 |
| BseDI | CCNNGG | 5 cut(s) | 291, 587, 845, 846, 1017 |
| BseGI | GGATG | 4 cut(s) | 287, 301, 950, 1108 |
| BseJI | GATNNNNATC | 1 cut(s) | 87 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 322 |
| BseMI | GCAATG | 3 cut(s) | 1134, 1140, 1579 |
| BseMII | CTCAG | 3 cut(s) | 606, 1284, 1341 |
| BseNI | ACTGG | 4 cut(s) | 250, 273, 1030, 1034 |
| BseRI | GAGGAG | 1 cut(s) | 792 |
| BseSI | GKGCMC | 1 cut(s) | 1237 |
| BseXI | GCAGC | 9 cut(s) | 23, 64, 638, 1111, 1166, 1169, 1344, 1511, 1562 |
| BsgI | GTGCAG | 1 cut(s) | 1080 |
| Bsh1236I | CGCG | 2 cut(s) | 900, 912 |
| BshFI | GGCC | 5 cut(s) | 375, 1098, 1200, 1344, 1511 |
| BsiHKAI | GWGCWC | 1 cut(s) | 641 |
| BsiHKCI | CYCGRG | 1 cut(s) | 996 |
| BsiSI | CCGG | 2 cut(s) | 68, 672 |
| BslFI | GGGAC | 2 cut(s) | 828, 863 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 322 |
| BsmFI | GGGAC | 2 cut(s) | 828, 863 |
| BsnI | GGCC | 5 cut(s) | 375, 1098, 1200, 1344, 1511 |
| BsoBI | CYCGRG | 1 cut(s) | 996 |
| Bsp1286I | GDGCHC | 2 cut(s) | 641, 1237 |
| Bsp13I | TCCGGA | 1 cut(s) | 67 |
| Bsp19I | CCATGG | 2 cut(s) | 291, 1017 |
| BspACI | CCGC | 5 cut(s) | 103, 714, 898, 1508, 1538 |
| BspANI | GGCC | 5 cut(s) | 375, 1098, 1200, 1344, 1511 |
| BspCNI | CTCAG | 3 cut(s) | 607, 1283, 1340 |
| BspEI | TCCGGA | 1 cut(s) | 67 |
| BspFNI | CGCG | 2 cut(s) | 900, 912 |
| BspLI | GGNNCC | 1 cut(s) | 816 |
| BspMAI | CTGCAG | 3 cut(s) | 13, 41, 656 |
| BspPI | GGATC | 5 cut(s) | 27, 541, 651, 753, 864 |
| BsrDI | GCAATG | 3 cut(s) | 1134, 1140, 1579 |
| BsrI | ACTGG | 4 cut(s) | 250, 273, 1030, 1034 |
| BssECI | CCNNGG | 5 cut(s) | 291, 587, 845, 846, 1017 |
| BssNI | GRCGYC | 1 cut(s) | 1139 |
| BssT1I | CCWWGG | 3 cut(s) | 291, 587, 1017 |
| Bst2UI | CCWGG | 4 cut(s) | 419, 437, 847, 1223 |
| Bst4CI | ACNGT | 4 cut(s) | 172, 399, 636, 1294 |
| Bst6I | CTCTTC | 1 cut(s) | 543 |
| BstACI | GRCGYC | 1 cut(s) | 1139 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1232 |
| BstC8I | GCNNGC | 3 cut(s) | 476, 898, 1346 |
| BstDEI | CTNAG | 5 cut(s) | 615, 749, 819, 1270, 1327 |
| BstDSI | CCRYGG | 2 cut(s) | 291, 1017 |
| BstF5I | GGATG | 4 cut(s) | 287, 301, 950, 1108 |
| BstFNI | CGCG | 2 cut(s) | 900, 912 |
| BstH2I | RGCGCY | 1 cut(s) | 1470 |
| BstHHI | GCGC | 3 cut(s) | 194, 914, 1469 |
| BstNI | CCWGG | 4 cut(s) | 419, 437, 847, 1223 |
| BstSCI | CCNGG | 5 cut(s) | 417, 435, 671, 845, 1221 |
| BstSFI | CTRYAG | 4 cut(s) | 9, 37, 652, 1503 |
| BstSLI | GKGCMC | 1 cut(s) | 1237 |
| BstUI | CGCG | 2 cut(s) | 900, 912 |
| BstV1I | GCAGC | 9 cut(s) | 23, 64, 638, 1111, 1166, 1169, 1344, 1511, 1562 |
| BstV2I | GAAGAC | 2 cut(s) | 333, 1071 |
| BstX2I | RGATCY | 2 cut(s) | 656, 745 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 853 |
| BstYI | RGATCY | 2 cut(s) | 656, 745 |
| BsuRI | GGCC | 5 cut(s) | 375, 1098, 1200, 1344, 1511 |
| BtgI | CCRYGG | 2 cut(s) | 291, 1017 |
| BtrI | CACGTC | 1 cut(s) | 853 |
| BtsCI | GGATG | 4 cut(s) | 287, 301, 950, 1108 |
| BtsI | GCAGTG | 1 cut(s) | 1515 |
| BtsIMutI | CAGTG | 4 cut(s) | 461, 641, 1290, 1515 |
| Cac8I | GCNNGC | 3 cut(s) | 476, 898, 1346 |
| CfoI | GCGC | 3 cut(s) | 194, 914, 1469 |
| Cfr13I | GGNCC | 1 cut(s) | 1303 |
| CseI | GACGC | 2 cut(s) | 915, 1128 |
| Csp6I | GTAC | 5 cut(s) | 723, 734, 765, 1014, 1049 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1239, 1274 |
| CviQI | GTAC | 5 cut(s) | 723, 734, 765, 1014, 1049 |
| DdeI | CTNAG | 5 cut(s) | 615, 749, 819, 1270, 1327 |
| DraI | TTTAAA | 1 cut(s) | 252 |
| EaeI | YGGCCR | 2 cut(s) | 1342, 1509 |
| Eam1104I | CTCTTC | 1 cut(s) | 543 |
| EarI | CTCTTC | 1 cut(s) | 543 |
| Eco130I | CCWWGG | 3 cut(s) | 291, 587, 1017 |
| Eco32I | GATATC | 1 cut(s) | 936 |
| Eco47I | GGWCC | 1 cut(s) | 1303 |
| Eco47III | AGCGCT | 1 cut(s) | 1468 |
| Eco57I | CTGAAG | 2 cut(s) | 942, 1260 |
| Eco88I | CYCGRG | 1 cut(s) | 996 |
| EcoRII | CCWGG | 4 cut(s) | 417, 435, 845, 1221 |
| EcoRV | GATATC | 1 cut(s) | 936 |
| EcoT14I | CCWWGG | 3 cut(s) | 291, 587, 1017 |
| ErhI | CCWWGG | 3 cut(s) | 291, 587, 1017 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 612, 644 |
| FaqI | GGGAC | 2 cut(s) | 828, 863 |
| FauI | CCCGC | 1 cut(s) | 905 |
| FbaI | TGATCA | 4 cut(s) | 82, 199, 493, 522 |
| FblI | GTMKAC | 1 cut(s) | 1142 |
| FokI | GGATG | 4 cut(s) | 274, 308, 957, 1095 |
| FspBI | CTAG | 4 cut(s) | 15, 726, 1188, 1403 |
| GlaI | GCGC | 3 cut(s) | 193, 913, 1468 |
| GsuI | CTGGAG | 1 cut(s) | 489 |
| HaeII | RGCGCY | 1 cut(s) | 1470 |
| HaeIII | GGCC | 5 cut(s) | 375, 1098, 1200, 1344, 1511 |
| HapII | CCGG | 2 cut(s) | 68, 672 |
| HgaI | GACGC | 2 cut(s) | 915, 1128 |
| HhaI | GCGC | 3 cut(s) | 194, 914, 1469 |
| Hin1I | GRCGYC | 1 cut(s) | 1139 |
| Hin6I | GCGC | 3 cut(s) | 192, 912, 1467 |
| HinP1I | GCGC | 3 cut(s) | 192, 912, 1467 |
| HinfI | GANTC | 4 cut(s) | 5, 28, 701, 841 |
| HpaII | CCGG | 2 cut(s) | 68, 672 |
| HphI | GGTGA | 2 cut(s) | 433, 1549 |
| Hpy166II | GTNNAC | 2 cut(s) | 424, 1143 |
| Hpy188I | TCNGA | 7 cut(s) | 150, 168, 871, 922, 940, 969, 1330 |
| Hpy188III | TCNNGA | 5 cut(s) | 68, 86, 218, 506, 1442 |
| Hpy8I | GTNNAC | 2 cut(s) | 424, 1143 |
| Hpy99I | CGWCG | 1 cut(s) | 239 |
| HpyAV | CCTTC | 3 cut(s) | 182, 641, 1088 |
| HpyCH4III | ACNGT | 4 cut(s) | 172, 399, 636, 1294 |
| HpyCH4IV | ACGT | 2 cut(s) | 237, 852 |
| HpyCH4V | TGCA | 8 cut(s) | 11, 39, 451, 469, 654, 1061, 1127, 1499 |
| HpyF3I | CTNAG | 5 cut(s) | 615, 749, 819, 1270, 1327 |
| HpySE526I | ACGT | 2 cut(s) | 237, 852 |
| Hsp92I | GRCGYC | 1 cut(s) | 1139 |
| HspAI | GCGC | 3 cut(s) | 192, 912, 1467 |
| Kpn2I | TCCGGA | 1 cut(s) | 67 |
| Ksp22I | TGATCA | 4 cut(s) | 82, 199, 493, 522 |
| LmnI | GCTCC | 1 cut(s) | 1285 |
| Lsp1109I | GCAGC | 9 cut(s) | 23, 64, 638, 1111, 1166, 1169, 1344, 1511, 1562 |
| LweI | GCATC | 4 cut(s) | 456, 935, 1169, 1323 |
| MaeI | CTAG | 4 cut(s) | 15, 726, 1188, 1403 |
| MaeII | ACGT | 2 cut(s) | 237, 852 |
| MaeIII | GTNAC | 4 cut(s) | 457, 1081, 1294, 1606 |
| MboII | GAAGA | 8 cut(s) | 197, 248, 338, 350, 560, 768, 794, 1076 |
| MflI | RGATCY | 2 cut(s) | 656, 745 |
| MhlI | GDGCHC | 2 cut(s) | 641, 1237 |
| MlsI | TGGCCA | 1 cut(s) | 1344 |
| MluCI | AATT | 7 cut(s) | 368, 430, 453, 593, 759, 1398, 1430 |
| MluNI | TGGCCA | 1 cut(s) | 1344 |
| MlyI | GAGTC | 2 cut(s) | 710, 850 |
| MmeI | TCCRAC | 2 cut(s) | 99, 1343 |
| Mox20I | TGGCCA | 1 cut(s) | 1344 |
| MroI | TCCGGA | 1 cut(s) | 67 |
| MroXI | GAANNNNTTC | 1 cut(s) | 569 |
| MscI | TGGCCA | 1 cut(s) | 1344 |
| MseI | TTAA | 3 cut(s) | 180, 251, 888 |
| MslI | CAYNNNNRTG | 1 cut(s) | 881 |
| Msp20I | TGGCCA | 1 cut(s) | 1344 |
| MspA1I | CMGCKG | 3 cut(s) | 1357, 1508, 1538 |
| MspI | CCGG | 2 cut(s) | 68, 672 |
| MspR9I | CCNGG | 5 cut(s) | 419, 437, 673, 847, 1223 |
| MvaI | CCWGG | 4 cut(s) | 419, 437, 847, 1223 |
| MvnI | CGCG | 2 cut(s) | 900, 912 |
| NciI | CCSGG | 1 cut(s) | 673 |
| NcoI | CCATGG | 2 cut(s) | 291, 1017 |
| NlaIV | GGNNCC | 1 cut(s) | 816 |
| NmuCI | GTSAC | 2 cut(s) | 457, 1294 |
| PaeR7I | CTCGAG | 1 cut(s) | 996 |
| PasI | CCCWGGG | 1 cut(s) | 846 |
| PdmI | GAANNNNTTC | 1 cut(s) | 569 |
| PfeI | GAWTC | 2 cut(s) | 5, 28 |
| PflFI | GACNNNGTC | 1 cut(s) | 1490 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 322 |
| PleI | GAGTC | 2 cut(s) | 709, 849 |
| PpsI | GAGTC | 2 cut(s) | 709, 849 |
| Psp6I | CCWGG | 4 cut(s) | 417, 435, 845, 1221 |
| PspGI | CCWGG | 4 cut(s) | 417, 435, 845, 1221 |
| PspN4I | GGNNCC | 1 cut(s) | 816 |
| PspPI | GGNCC | 1 cut(s) | 1303 |
| PspXI | VCTCGAGB | 1 cut(s) | 996 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 416, 448 |
| PstI | CTGCAG | 3 cut(s) | 13, 41, 656 |
| PsuI | RGATCY | 2 cut(s) | 656, 745 |
| PsyI | GACNNNGTC | 1 cut(s) | 1490 |
| PvuII | CAGCTG | 1 cut(s) | 1357 |
| RsaI | GTAC | 5 cut(s) | 724, 735, 766, 1015, 1050 |
| RsaNI | GTAC | 5 cut(s) | 723, 734, 765, 1014, 1049 |
| RseI | CAYNNNNRTG | 1 cut(s) | 881 |
| SaqAI | TTAA | 3 cut(s) | 180, 251, 888 |
| Sau96I | GGNCC | 1 cut(s) | 1303 |
| ScaI | AGTACT | 2 cut(s) | 724, 766 |
| SchI | GAGTC | 2 cut(s) | 710, 850 |
| ScrFI | CCNGG | 5 cut(s) | 419, 437, 673, 847, 1223 |
| SduI | GDGCHC | 2 cut(s) | 641, 1237 |
| SfaNI | GCATC | 4 cut(s) | 456, 935, 1169, 1323 |
| SfcI | CTRYAG | 4 cut(s) | 9, 37, 652, 1503 |
| Sfr274I | CTCGAG | 1 cut(s) | 996 |
| SinI | GGWCC | 1 cut(s) | 1303 |
| SlaI | CTCGAG | 1 cut(s) | 996 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 881 |
| SmlI | CTYRAG | 1 cut(s) | 996 |
| SmoI | CTYRAG | 1 cut(s) | 996 |
| SpeI | ACTAGT | 1 cut(s) | 725 |
| Sse9I | AATT | 7 cut(s) | 368, 430, 453, 593, 759, 1398, 1430 |
| SsiI | CCGC | 5 cut(s) | 103, 714, 898, 1508, 1538 |
| SspMI | CTAG | 4 cut(s) | 15, 726, 1188, 1403 |
| StyD4I | CCNGG | 5 cut(s) | 417, 435, 671, 845, 1221 |
| StyI | CCWWGG | 3 cut(s) | 291, 587, 1017 |
| TaaI | ACNGT | 4 cut(s) | 172, 399, 636, 1294 |
| TaiI | ACGT | 2 cut(s) | 240, 855 |
| TaqI | TCGA | 6 cut(s) | 26, 48, 997, 1312, 1427, 1443 |
| TaqII | GACCGA | 1 cut(s) | 1083 |
| TasI | AATT | 7 cut(s) | 368, 430, 453, 593, 759, 1398, 1430 |
| TatI | WGTACW | 3 cut(s) | 722, 733, 764 |
| TauI | GCSGC | 3 cut(s) | 717, 1511, 1541 |
| TfiI | GAWTC | 2 cut(s) | 5, 28 |
| Tru1I | TTAA | 3 cut(s) | 180, 251, 888 |
| Tru9I | TTAA | 3 cut(s) | 180, 251, 888 |
| TscAI | CASTG | 4 cut(s) | 468, 641, 1297, 1522 |
| TseFI | GTSAC | 2 cut(s) | 457, 1294 |
| TseI | GCWGC | 9 cut(s) | 11, 52, 651, 1124, 1154, 1157, 1357, 1499, 1550 |
| Tsp45I | GTSAC | 2 cut(s) | 457, 1294 |
| TspDTI | ATGAA | 3 cut(s) | 297, 578, 1568 |
| TspRI | CASTG | 4 cut(s) | 468, 641, 1297, 1522 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1490 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 322 |
| VpaK11BI | GGWCC | 1 cut(s) | 1303 |
| XapI | RAATTY | 2 cut(s) | 1398, 1430 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1297 |
| XhoI | CTCGAG | 1 cut(s) | 996 |
| XmiI | GTMKAC | 1 cut(s) | 1142 |
| XmnI | GAANNNNTTC | 1 cut(s) | 569 |
| XspI | CTAG | 4 cut(s) | 15, 726, 1188, 1403 |
| ZrmI | AGTACT | 2 cut(s) | 724, 766 |