WRKY transcription factor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g23150 |
| malus_domestica | MD03G1197600.v1.1 MD11G1213500.v1.1 |
| prunus_persica | Prupe.4G217900_v2.0.a1 |
| pyrus_communis | pycom03g14910 pycom11g18810 pycom12g06880 |
| rosa_chinensis | RchiOBHm_Chr5g0040801 |
| rosa_laevigata | RLG00000034002 |
| rosa_multiflora | Rmu_sc0001579.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00039900 |
| rosa_rugosa | Rorug05G0187400 Rorug05G0187500 |
| rosa_samantha | Rh5AG273100 Rh5BG278200 Rh5CG310200 Rh5DG286100 |
| rosa_wichuraiana | Rw5G025680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 41 |
| AcsI | RAATTY | 1 cut(s) | 235 |
| AfaI | GTAC | 1 cut(s) | 165 |
| AgsI | TTSAA | 2 cut(s) | 16, 128 |
| AhlI | ACTAGT | 1 cut(s) | 166 |
| AluBI | AGCT | 1 cut(s) | 70 |
| AluI | AGCT | 1 cut(s) | 70 |
| ApeKI | GCWGC | 3 cut(s) | 93, 155, 205 |
| ApoI | RAATTY | 1 cut(s) | 235 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 11 |
| AspS9I | GGNCC | 1 cut(s) | 143 |
| AsuC2I | CCSGG | 1 cut(s) | 115 |
| AvaII | GGWCC | 1 cut(s) | 143 |
| BbvI | GCAGC | 3 cut(s) | 80, 142, 192 |
| BcnI | CCSGG | 1 cut(s) | 115 |
| BcuI | ACTAGT | 1 cut(s) | 166 |
| BfaI | CTAG | 2 cut(s) | 167, 180 |
| BfmI | CTRYAG | 1 cut(s) | 94 |
| BglII | AGATCT | 1 cut(s) | 98 |
| BisI | GCNGC | 3 cut(s) | 94, 156, 206 |
| BlsI | GCNGC | 3 cut(s) | 95, 157, 207 |
| BmcAI | AGTACT | 1 cut(s) | 165 |
| Bme1390I | CCNGG | 1 cut(s) | 115 |
| Bme18I | GGWCC | 1 cut(s) | 143 |
| BmgT120I | GGNCC | 1 cut(s) | 143 |
| BmiI | GGNNCC | 1 cut(s) | 263 |
| BmrFI | CCNGG | 1 cut(s) | 115 |
| BpuEI | CTTGAG | 1 cut(s) | 87 |
| BpuMI | CCSGG | 1 cut(s) | 115 |
| BsaJI | CCNNGG | 1 cut(s) | 146 |
| BseDI | CCNNGG | 1 cut(s) | 146 |
| BseMII | CTCAG | 1 cut(s) | 48 |
| BseXI | GCAGC | 3 cut(s) | 80, 142, 192 |
| BseYI | CCCAGC | 1 cut(s) | 208 |
| BsiSI | CCGG | 1 cut(s) | 114 |
| Bsp143I | GATC | 1 cut(s) | 98 |
| BspCNI | CTCAG | 1 cut(s) | 49 |
| BspHI | TCATGA | 1 cut(s) | 85 |
| BspLI | GGNNCC | 1 cut(s) | 263 |
| BspMAI | CTGCAG | 1 cut(s) | 98 |
| BssECI | CCNNGG | 1 cut(s) | 146 |
| BssMI | GATC | 1 cut(s) | 98 |
| BstDEI | CTNAG | 2 cut(s) | 57, 254 |
| BstDSI | CCRYGG | 1 cut(s) | 146 |
| BstKTI | GATC | 1 cut(s) | 101 |
| BstMBI | GATC | 1 cut(s) | 98 |
| BstSCI | CCNGG | 1 cut(s) | 113 |
| BstSFI | CTRYAG | 1 cut(s) | 94 |
| BstV1I | GCAGC | 3 cut(s) | 80, 142, 192 |
| BstX2I | RGATCY | 1 cut(s) | 98 |
| BstYI | RGATCY | 1 cut(s) | 98 |
| BtgI | CCRYGG | 1 cut(s) | 146 |
| CciI | TCATGA | 1 cut(s) | 85 |
| Cfr13I | GGNCC | 1 cut(s) | 143 |
| Csp6I | GTAC | 1 cut(s) | 164 |
| CviAII | CATG | 3 cut(s) | 86, 135, 241 |
| CviJI | RGCY | 3 cut(s) | 56, 70, 93 |
| CviKI_1 | RGCY | 3 cut(s) | 56, 70, 93 |
| CviQI | GTAC | 1 cut(s) | 164 |
| DdeI | CTNAG | 2 cut(s) | 57, 254 |
| DpnI | GATC | 1 cut(s) | 100 |
| DpnII | GATC | 1 cut(s) | 98 |
| Eco47I | GGWCC | 1 cut(s) | 143 |
| FaeI | CATG | 3 cut(s) | 89, 138, 244 |
| FaiI | YATR | 6 cut(s) | 41, 47, 87, 136, 173, 242 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 54, 86 |
| FatI | CATG | 3 cut(s) | 85, 134, 240 |
| Fnu4HI | GCNGC | 3 cut(s) | 94, 156, 206 |
| Fsp4HI | GCNGC | 3 cut(s) | 94, 156, 206 |
| FspBI | CTAG | 2 cut(s) | 167, 180 |
| GluI | GCNGC | 3 cut(s) | 94, 156, 206 |
| GsaI | CCCAGC | 1 cut(s) | 212 |
| HapII | CCGG | 1 cut(s) | 114 |
| Hin1II | CATG | 3 cut(s) | 89, 138, 244 |
| HpaII | CCGG | 1 cut(s) | 114 |
| Hpy166II | GTNNAC | 1 cut(s) | 177 |
| Hpy188III | TCNNGA | 2 cut(s) | 86, 104 |
| Hpy8I | GTNNAC | 1 cut(s) | 177 |
| HpyAV | CCTTC | 3 cut(s) | 83, 134, 252 |
| HpyCH4V | TGCA | 2 cut(s) | 96, 158 |
| HpyF3I | CTNAG | 2 cut(s) | 57, 254 |
| Hsp92II | CATG | 3 cut(s) | 89, 138, 244 |
| Kzo9I | GATC | 1 cut(s) | 98 |
| LpnPI | CCDG | 4 cut(s) | 126, 127, 194, 239 |
| Lsp1109I | GCAGC | 3 cut(s) | 80, 142, 192 |
| MaeI | CTAG | 2 cut(s) | 167, 180 |
| MalI | GATC | 1 cut(s) | 100 |
| MboI | GATC | 1 cut(s) | 98 |
| MboII | GAAGA | 2 cut(s) | 206, 229 |
| MflI | RGATCY | 1 cut(s) | 98 |
| MluCI | AATT | 2 cut(s) | 35, 235 |
| MroXI | GAANNNNTTC | 1 cut(s) | 11 |
| MspI | CCGG | 1 cut(s) | 114 |
| MspR9I | CCNGG | 1 cut(s) | 115 |
| NciI | CCSGG | 1 cut(s) | 115 |
| NdeII | GATC | 1 cut(s) | 98 |
| NlaIII | CATG | 3 cut(s) | 89, 138, 244 |
| NlaIV | GGNNCC | 1 cut(s) | 263 |
| PagI | TCATGA | 1 cut(s) | 85 |
| PdmI | GAANNNNTTC | 1 cut(s) | 11 |
| PflFI | GACNNNGTC | 1 cut(s) | 136 |
| PkrI | GCNGC | 3 cut(s) | 95, 157, 207 |
| PsiI | TTATAA | 1 cut(s) | 41 |
| PspFI | CCCAGC | 1 cut(s) | 208 |
| PspN4I | GGNNCC | 1 cut(s) | 263 |
| PspPI | GGNCC | 1 cut(s) | 143 |
| PstI | CTGCAG | 1 cut(s) | 98 |
| PsuI | RGATCY | 1 cut(s) | 98 |
| PsyI | GACNNNGTC | 1 cut(s) | 136 |
| RsaI | GTAC | 1 cut(s) | 165 |
| RsaNI | GTAC | 1 cut(s) | 164 |
| SatI | GCNGC | 3 cut(s) | 94, 156, 206 |
| Sau3AI | GATC | 1 cut(s) | 98 |
| Sau96I | GGNCC | 1 cut(s) | 143 |
| ScaI | AGTACT | 1 cut(s) | 165 |
| ScrFI | CCNGG | 1 cut(s) | 115 |
| SetI | ASST | 4 cut(s) | 14, 72, 145, 263 |
| SfcI | CTRYAG | 1 cut(s) | 94 |
| SinI | GGWCC | 1 cut(s) | 143 |
| SmlI | CTYRAG | 1 cut(s) | 102 |
| SmoI | CTYRAG | 1 cut(s) | 102 |
| SpeI | ACTAGT | 1 cut(s) | 166 |
| Sse9I | AATT | 2 cut(s) | 35, 235 |
| SspMI | CTAG | 2 cut(s) | 167, 180 |
| StyD4I | CCNGG | 1 cut(s) | 113 |
| TasI | AATT | 2 cut(s) | 35, 235 |
| TatI | WGTACW | 1 cut(s) | 163 |
| TseI | GCWGC | 3 cut(s) | 93, 155, 205 |
| TspDTI | ATGAA | 3 cut(s) | 20, 102, 229 |
| TspGWI | ACGGA | 1 cut(s) | 135 |
| Tth111I | GACNNNGTC | 1 cut(s) | 136 |
| VpaK11BI | GGWCC | 1 cut(s) | 143 |
| XapI | RAATTY | 1 cut(s) | 235 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 238 |
| XmnI | GAANNNNTTC | 1 cut(s) | 11 |
| XspI | CTAG | 2 cut(s) | 167, 180 |
| ZrmI | AGTACT | 1 cut(s) | 165 |