pycom03g14910
WRKY Family

WRKY transcription factor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Forward (+)
16287855 .. 16290442
2588 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g14910.5

Sequence Viewer

Length: 1515 bp
ATGGAATCTTCAGATAGTGATCATTCTATTCACAACTGCAGATTCGTACTTTCTTCTGAGATGACAAATGATTACAATCATGGGAAACGAGTGGTTGATGAATTGGACTTCTTTGCTGATAAGGGCCATTTGAAAGAAGATAGAGATCACACGGCTGAAGTTAAAGAAGAATGCGAACGTCAAGGGGTTGGTCAAGAAAAGCAACTACCCGACGTAAATCTGGCAGTTCTTCGAGCTGAATTAGGCCGTATGAACGTAGAAAACCAACAGTTGAGAGGTGCGATTCATCAGTTAAACACTCATTACCAGGCGTTACAGGTGCACCTTGTGACACTGATGCAACGCCAGAAAAATCAAAAGACTGATTATCAAACTGCAGAACAACACAAGATGAACATAAATGGATCAGTGGTACTAGAAGAGAAGCAGATGATGAACGGGATTAATAATCTTGCTCCAAGACAATTTATGGATATGGGAAGGGCTGAGAAAGATGAGCTTTCACAGTGTTCTCATGAAGAGCTGCATCGATCCCAAGATTGTTCCAGGTCGTCCCCTCAAAACGACATCGTCGAGTCAATGGAGTGCTGCAAGAGTACTAGTCATGTTCACAGGGATATTAGTGGAAGAAGTCGTACTGCTGGGGGGGAAGATAGCCCTGACCAAGAACTTCAAGGGCGGATTCCTAAGAAGGTTCCCAAGTTGATGAGCCCTAGGGAAGTGGATCGACCCTCATCTGAAGCCATGTCCATGATTAAAAAAGCTCGTGTTTCAGTTCGAGCACGATCTGAAGCTTCCATGATATCTGATGGATGCCAATGGAGAAAGTATGGCCAGAAAATGGCTAAAGGAAACCCATGCCCTCGAGCTTATTATCGTTGCACCATGAGAACTGGTTGCCCAGTTCGCAAACAGGTACAGAGATGTGCGGAAGATCGAACAATACTTATAACAACATACGAAGGCCACCACAACCATCCACTCCCTCCTGCTGCAATGGCCATGGCATCTACCACATCAGCAGCAGCATCAATGCTTCTATCAGGTTCAATGCCTAGTGCTGATGGCCTAATAAGCTCAAACAGCTTCCTAGCAAGAACTGGATTGCCTAACTGTCCACCAAGCTTGGCAACACTTTCGGCCTCAGCCCCATTTCCTACTGTCACCTTGGACCTCACTCGCACTCCCACTTCCTCAGAGATGCCACTTGGCCAACCAAACCAGCTCCCTCCAAATTTTCCTCACAACAATCTTATGTCTGTGCCACAAGTTCTAGGTCAAGCCCTTTGCAACCAATCCAAATTCTCGGTTCTCAATAGCCTTCAGGGGTTGGATAGTACTACACACTCACTGGCTGACAAAATCAGTGCAGCAACAGCGGCCATCACAGCGGACCCTAATTTCACAGCGGCTCTGGTAGCAGCCATCACCTCTATTGTTGGCAATGGTCATTCAGACAATAACACCTACAACAATATTGCTACAAGAAACAATAGTGACGACAATACAAAATAA

Protein Analysis

505

Amino Acids

55.51

Weight (kDa)

6.83

Isoelectric Point (pI)

47.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013643)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 950
AccB7I CCANNNNNTGG 1 cut(s) 841
AciI CCGC 5 cut(s) 679, 929, 1379, 1391, 1409
AclWI GGATC 3 cut(s) 412, 525, 732
AcoI YGGCCR 4 cut(s) 832, 999, 1210, 1380
AcsI RAATTY 2 cut(s) 1234, 1301
AcuI CTGAAG 4 cut(s) 177, 759, 810, 1307
AdeI CACNNNGTG 1 cut(s) 328
AfaI GTAC 6 cut(s) 48, 414, 598, 637, 918, 1339
AfiI CCNNNNNNNGG 1 cut(s) 841
AgsI TTSAA 3 cut(s) 133, 674, 1050
AhlI ACTAGT 1 cut(s) 599
AjnI CCWGG 2 cut(s) 306, 545
Alw21I GWGCWC 2 cut(s) 324, 784
Alw44I GTGCAC 1 cut(s) 320
AlwI GGATC 3 cut(s) 412, 525, 732
Ama87I CYCGRG 1 cut(s) 864
AoxI GGCC 9 cut(s) 124, 244, 832, 964, 999, 1066, 1140, 1210, 1380
ApaLI GTGCAC 1 cut(s) 320
ApeKI GCWGC 7 cut(s) 523, 588, 992, 1022, 1025, 1370, 1421
ApoI RAATTY 2 cut(s) 1234, 1301
AseI ATTAAT 1 cut(s) 444
AspA2I CCTAGG 1 cut(s) 713
AspS9I GGNCC 3 cut(s) 124, 1171, 1393
AsuHPI GGTGA 2 cut(s) 1156, 1420
AvaI CYCGRG 1 cut(s) 864
AvaII GGWCC 2 cut(s) 1171, 1393
AvrII CCTAGG 1 cut(s) 713
BaeGI GKGCMC 1 cut(s) 324
BalI TGGCCA 3 cut(s) 834, 1001, 1212
BanII GRGCYC 1 cut(s) 713
BarI GAAGNNNNNNTAC 2 cut(s) 619, 651
BauI CACGAG 1 cut(s) 765
Bbv12I GWGCWC 2 cut(s) 324, 784
BbvCI CCTCAGC 1 cut(s) 1144
BbvI GCAGC 7 cut(s) 510, 575, 979, 1034, 1037, 1382, 1433
BccI CCATC 5 cut(s) 803, 984, 1058, 1391, 1433
BceAI ACGGC 2 cut(s) 168, 231
BcgI CGANNNNNNTGC 2 cut(s) 1119, 1153
BciT130I CCWGG 2 cut(s) 308, 547
BclI TGATCA 1 cut(s) 19
BcuI ACTAGT 1 cut(s) 599
BfaI CTAG 6 cut(s) 416, 600, 714, 1056, 1091, 1274
BfmI CTRYAG 2 cut(s) 37, 375
BisI GCNGC 9 cut(s) 524, 589, 993, 1023, 1026, 1371, 1380, 1410, 1422
BlnI CCTAGG 1 cut(s) 713
BlsI GCNGC 9 cut(s) 525, 590, 994, 1024, 1027, 1372, 1381, 1411, 1423
BmcAI AGTACT 2 cut(s) 598, 1339
Bme1390I CCNGG 2 cut(s) 308, 547
Bme18I GGWCC 2 cut(s) 1171, 1393
BmeT110I CYCGRG 1 cut(s) 864
BmgT120I GGNCC 3 cut(s) 124, 1171, 1393
BmiI GGNNCC 2 cut(s) 696, 1395
BmrFI CCNGG 2 cut(s) 308, 547
BmrI ACTGGG 1 cut(s) 896
BmsI GCATC 6 cut(s) 327, 535, 803, 1016, 1037, 1191
BmuI ACTGGG 1 cut(s) 896
Bpu10I CCTNAGC 1 cut(s) 1144
Bsa29I ATCGAT 1 cut(s) 529
BsaBI GATNNNNATC 3 cut(s) 18, 75, 144
BsaJI CCNNGG 3 cut(s) 713, 1002, 1167
BsaXI ACNNNNNCTCC 2 cut(s) 1168, 1198
Bsc4I CCNNNNNNNGG 1 cut(s) 841
Bse1I ACTGG 4 cut(s) 898, 902, 1105, 1356
Bse3DI GCAATG 2 cut(s) 1002, 1450
Bse8I GATNNNNATC 3 cut(s) 18, 75, 144
BseBI CCWGG 2 cut(s) 308, 547
BseCI ATCGAT 1 cut(s) 529
BseDI CCNNGG 3 cut(s) 713, 1002, 1167
BseGI GGATG 2 cut(s) 818, 976
BseJI GATNNNNATC 3 cut(s) 18, 75, 144
BseLI CCNNNNNNNGG 1 cut(s) 841
BseMI GCAATG 2 cut(s) 1002, 1450
BseMII CTCAG 4 cut(s) 48, 477, 1158, 1209
BseNI ACTGG 4 cut(s) 898, 902, 1105, 1356
BseSI GKGCMC 1 cut(s) 324
BseXI GCAGC 7 cut(s) 510, 575, 979, 1034, 1037, 1382, 1433
BseYI CCCAGC 1 cut(s) 641
BsgI GTGCAG 1 cut(s) 1389
BshFI GGCC 9 cut(s) 126, 246, 834, 966, 1001, 1068, 1142, 1212, 1382
BshVI ATCGAT 1 cut(s) 529
BsiHKAI GWGCWC 2 cut(s) 324, 784
BsiHKCI CYCGRG 1 cut(s) 864
BslFI GGGAC 1 cut(s) 538
BslI CCNNNNNNNGG 1 cut(s) 841
BsmFI GGGAC 1 cut(s) 538
BsmI GAATGC 1 cut(s) 176
BsnI GGCC 9 cut(s) 126, 246, 834, 966, 1001, 1068, 1142, 1212, 1382
BsoBI CYCGRG 1 cut(s) 864
Bsp1286I GDGCHC 3 cut(s) 324, 713, 784
Bsp143I GATC 7 cut(s) 19, 145, 404, 530, 724, 785, 934
Bsp19I CCATGG 1 cut(s) 1002
BspACI CCGC 5 cut(s) 679, 929, 1379, 1391, 1409
BspANI GGCC 9 cut(s) 126, 246, 834, 966, 1001, 1068, 1142, 1212, 1382
BspCNI CTCAG 4 cut(s) 49, 478, 1157, 1208
BspDI ATCGAT 1 cut(s) 529
BspHI TCATGA 1 cut(s) 514
BspLI GGNNCC 2 cut(s) 696, 1395
BspMAI CTGCAG 2 cut(s) 41, 379
BspPI GGATC 3 cut(s) 412, 525, 732
BspQI GCTCTTC 1 cut(s) 513
BsrDI GCAATG 2 cut(s) 1002, 1450
BsrI ACTGG 4 cut(s) 898, 902, 1105, 1356
BssECI CCNNGG 3 cut(s) 713, 1002, 1167
BssMI GATC 7 cut(s) 19, 145, 404, 530, 724, 785, 934
BssSI CACGAG 1 cut(s) 765
BssT1I CCWWGG 3 cut(s) 713, 1002, 1167
Bst2BI CACGAG 1 cut(s) 765
Bst2UI CCWGG 2 cut(s) 308, 547
Bst4CI ACNGT 4 cut(s) 270, 507, 1115, 1162
Bst6I CTCTTC 2 cut(s) 414, 513
BstDEI CTNAG 5 cut(s) 57, 486, 687, 1144, 1195
BstDSI CCRYGG 1 cut(s) 1002
BstF5I GGATG 2 cut(s) 818, 976
BstKTI GATC 7 cut(s) 22, 148, 407, 533, 727, 788, 937
BstMBI GATC 7 cut(s) 19, 145, 404, 530, 724, 785, 934
BstMWI GCNNNNNNNGC 8 cut(s) 906, 998, 1074, 1083, 1376, 1379, 1388, 1418
BstNI CCWGG 2 cut(s) 308, 547
BstSCI CCNGG 2 cut(s) 306, 545
BstSFI CTRYAG 2 cut(s) 37, 375
BstSLI GKGCMC 1 cut(s) 324
BstV1I GCAGC 7 cut(s) 510, 575, 979, 1034, 1037, 1382, 1433
Bsu15I ATCGAT 1 cut(s) 529
BsuRI GGCC 9 cut(s) 126, 246, 834, 966, 1001, 1068, 1142, 1212, 1382
BsuTUI ATCGAT 1 cut(s) 529
BtgI CCRYGG 1 cut(s) 1002
BtsCI GGATG 2 cut(s) 818, 976
BtsIMutI CAGTG 5 cut(s) 332, 414, 512, 1349, 1372
CciI TCATGA 1 cut(s) 514
Cfr13I GGNCC 3 cut(s) 124, 1171, 1393
ClaI ATCGAT 1 cut(s) 529
Csp6I GTAC 6 cut(s) 47, 413, 597, 636, 917, 1338
CspCI CAANNNNNGTGG 2 cut(s) 1107, 1142
CviAII CATG 9 cut(s) 80, 515, 605, 745, 751, 799, 858, 886, 1003
CviQI GTAC 6 cut(s) 47, 413, 597, 636, 917, 1338
DdeI CTNAG 5 cut(s) 57, 486, 687, 1144, 1195
DpnI GATC 7 cut(s) 21, 147, 406, 532, 726, 787, 936
DpnII GATC 7 cut(s) 19, 145, 404, 530, 724, 785, 934
DraIII CACNNNGTG 1 cut(s) 328
EaeI YGGCCR 4 cut(s) 832, 999, 1210, 1380
Eam1104I CTCTTC 2 cut(s) 414, 513
EarI CTCTTC 2 cut(s) 414, 513
EciI GGCGGA 1 cut(s) 694
Eco130I CCWWGG 3 cut(s) 713, 1002, 1167
Eco24I GRGCYC 1 cut(s) 713
Eco32I GATATC 1 cut(s) 804
Eco47I GGWCC 2 cut(s) 1171, 1393
Eco57I CTGAAG 4 cut(s) 177, 759, 810, 1307
Eco88I CYCGRG 1 cut(s) 864
EcoRII CCWGG 2 cut(s) 306, 545
EcoRV GATATC 1 cut(s) 804
EcoT14I CCWWGG 3 cut(s) 713, 1002, 1167
EcoT38I GRGCYC 1 cut(s) 713
ErhI CCWWGG 3 cut(s) 713, 1002, 1167
FaeI CATG 9 cut(s) 83, 518, 608, 748, 754, 802, 861, 889, 1006
FalI AAGNNNNNCTT 2 cut(s) 483, 515
FaqI GGGAC 1 cut(s) 538
FatI CATG 9 cut(s) 79, 514, 604, 744, 750, 798, 857, 885, 1002
FbaI TGATCA 1 cut(s) 19
Fnu4HI GCNGC 9 cut(s) 524, 589, 993, 1023, 1026, 1371, 1380, 1410, 1422
FokI GGATG 2 cut(s) 825, 963
FriOI GRGCYC 1 cut(s) 713
Fsp4HI GCNGC 9 cut(s) 524, 589, 993, 1023, 1026, 1371, 1380, 1410, 1422
FspBI CTAG 6 cut(s) 416, 600, 714, 1056, 1091, 1274
GluI GCNGC 9 cut(s) 524, 589, 993, 1023, 1026, 1371, 1380, 1410, 1422
GsaI CCCAGC 1 cut(s) 645
HaeIII GGCC 9 cut(s) 126, 246, 834, 966, 1001, 1068, 1142, 1212, 1382
Hin1II CATG 9 cut(s) 83, 518, 608, 748, 754, 802, 861, 889, 1006
HindIII AAGCTT 2 cut(s) 792, 1123
HinfI GANTC 5 cut(s) 5, 42, 283, 575, 682
HphI GGTGA 2 cut(s) 1156, 1420
Hpy166II GTNNAC 3 cut(s) 322, 610, 1118
Hpy188I TCNGA 7 cut(s) 13, 58, 739, 790, 808, 1198, 1456
Hpy188III TCNNGA 2 cut(s) 194, 515
Hpy8I GTNNAC 3 cut(s) 322, 610, 1118
Hpy99I CGWCG 2 cut(s) 215, 575
HpyAV CCTTC 4 cut(s) 474, 685, 956, 1331
HpyCH4III ACNGT 4 cut(s) 270, 507, 1115, 1162
HpyCH4IV ACGT 3 cut(s) 178, 213, 255
HpyF10VI GCNNNNNNNGC 8 cut(s) 906, 998, 1074, 1083, 1376, 1379, 1388, 1418
HpyF3I CTNAG 5 cut(s) 57, 486, 687, 1144, 1195
HpySE526I ACGT 3 cut(s) 178, 213, 255
Hsp92II CATG 9 cut(s) 83, 518, 608, 748, 754, 802, 861, 889, 1006
Ksp22I TGATCA 1 cut(s) 19
Kzo9I GATC 7 cut(s) 19, 145, 404, 530, 724, 785, 934
LguI GCTCTTC 1 cut(s) 513
LmnI GCTCC 2 cut(s) 460, 1230
Lsp1109I GCAGC 7 cut(s) 510, 575, 979, 1034, 1037, 1382, 1433
LweI GCATC 6 cut(s) 327, 535, 803, 1016, 1037, 1191
MaeI CTAG 6 cut(s) 416, 600, 714, 1056, 1091, 1274
MaeII ACGT 3 cut(s) 178, 213, 255
MaeIII GTNAC 4 cut(s) 312, 328, 1162, 1496
MalI GATC 7 cut(s) 21, 147, 406, 532, 726, 787, 936
MboI GATC 7 cut(s) 19, 145, 404, 530, 724, 785, 934
MboII GAAGA 9 cut(s) 45, 149, 179, 221, 431, 530, 639, 662, 944
MhlI GDGCHC 3 cut(s) 324, 713, 784
MlsI TGGCCA 3 cut(s) 834, 1001, 1212
MluCI AATT 6 cut(s) 101, 239, 464, 1234, 1301, 1399
MluNI TGGCCA 3 cut(s) 834, 1001, 1212
MlyI GAGTC 1 cut(s) 584
MmeI TCCRAC 1 cut(s) 1311
Mox20I TGGCCA 3 cut(s) 834, 1001, 1212
MscI TGGCCA 3 cut(s) 834, 1001, 1212
MseI TTAA 4 cut(s) 162, 293, 444, 756
MslI CAYNNNNRTG 1 cut(s) 749
Msp20I TGGCCA 3 cut(s) 834, 1001, 1212
MspA1I CMGCKG 3 cut(s) 1379, 1391, 1409
MspR9I CCNGG 2 cut(s) 308, 547
Mva1269I GAATGC 1 cut(s) 176
MvaI CCWGG 2 cut(s) 308, 547
MwoI GCNNNNNNNGC 8 cut(s) 906, 998, 1074, 1083, 1376, 1379, 1388, 1418
NcoI CCATGG 1 cut(s) 1002
NdeII GATC 7 cut(s) 19, 145, 404, 530, 724, 785, 934
NlaIII CATG 9 cut(s) 83, 518, 608, 748, 754, 802, 861, 889, 1006
NlaIV GGNNCC 2 cut(s) 696, 1395
NmuCI GTSAC 3 cut(s) 328, 1162, 1496
PaeR7I CTCGAG 1 cut(s) 864
PagI TCATGA 1 cut(s) 514
PciSI GCTCTTC 1 cut(s) 513
PcsI WCGNNNNNNNCGW 1 cut(s) 570
PctI GAATGC 1 cut(s) 176
PfeI GAWTC 4 cut(s) 5, 42, 283, 682
PflFI GACNNNGTC 1 cut(s) 569
PflMI CCANNNNNTGG 1 cut(s) 841
PkrI GCNGC 9 cut(s) 525, 590, 994, 1024, 1027, 1372, 1381, 1411, 1423
PleI GAGTC 1 cut(s) 583
PpsI GAGTC 1 cut(s) 583
PshBI ATTAAT 1 cut(s) 444
PsiI TTATAA 1 cut(s) 950
Psp6I CCWGG 2 cut(s) 306, 545
PspFI CCCAGC 1 cut(s) 641
PspGI CCWGG 2 cut(s) 306, 545
PspN4I GGNNCC 2 cut(s) 696, 1395
PspPI GGNCC 3 cut(s) 124, 1171, 1393
PspXI VCTCGAGB 1 cut(s) 864
PstI CTGCAG 2 cut(s) 41, 379
PsyI GACNNNGTC 1 cut(s) 569
RsaI GTAC 6 cut(s) 48, 414, 598, 637, 918, 1339
RsaNI GTAC 6 cut(s) 47, 413, 597, 636, 917, 1338
RseI CAYNNNNRTG 1 cut(s) 749
SapI GCTCTTC 1 cut(s) 513
SaqAI TTAA 4 cut(s) 162, 293, 444, 756
SatI GCNGC 9 cut(s) 524, 589, 993, 1023, 1026, 1371, 1380, 1410, 1422
Sau3AI GATC 7 cut(s) 19, 145, 404, 530, 724, 785, 934
Sau96I GGNCC 3 cut(s) 124, 1171, 1393
ScaI AGTACT 2 cut(s) 598, 1339
SchI GAGTC 1 cut(s) 584
ScrFI CCNGG 2 cut(s) 308, 547
SduI GDGCHC 3 cut(s) 324, 713, 784
SfaNI GCATC 6 cut(s) 327, 535, 803, 1016, 1037, 1191
SfcI CTRYAG 2 cut(s) 37, 375
Sfr274I CTCGAG 1 cut(s) 864
SinI GGWCC 2 cut(s) 1171, 1393
SlaI CTCGAG 1 cut(s) 864
SmiMI CAYNNNNRTG 1 cut(s) 749
SmlI CTYRAG 1 cut(s) 864
SmoI CTYRAG 1 cut(s) 864
SpeI ACTAGT 1 cut(s) 599
Sse9I AATT 6 cut(s) 101, 239, 464, 1234, 1301, 1399
SsiI CCGC 5 cut(s) 679, 929, 1379, 1391, 1409
SspI AATATT 1 cut(s) 1477
SspMI CTAG 6 cut(s) 416, 600, 714, 1056, 1091, 1274
StyD4I CCNGG 2 cut(s) 306, 545
StyI CCWWGG 3 cut(s) 713, 1002, 1167
TaaI ACNGT 4 cut(s) 270, 507, 1115, 1162
TaiI ACGT 3 cut(s) 181, 216, 258
TaqI TCGA 7 cut(s) 232, 529, 573, 727, 778, 865, 937
TasI AATT 6 cut(s) 101, 239, 464, 1234, 1301, 1399
TatI WGTACW 2 cut(s) 596, 1337
TauI GCSGC 2 cut(s) 1382, 1412
TfiI GAWTC 4 cut(s) 5, 42, 283, 682
Tru1I TTAA 4 cut(s) 162, 293, 444, 756
Tru9I TTAA 4 cut(s) 162, 293, 444, 756
TscAI CASTG 5 cut(s) 339, 414, 512, 1356, 1372
TseFI GTSAC 3 cut(s) 328, 1162, 1496
TseI GCWGC 7 cut(s) 523, 588, 992, 1022, 1025, 1370, 1421
Tsp45I GTSAC 3 cut(s) 328, 1162, 1496
TspDTI ATGAA 6 cut(s) 114, 266, 275, 407, 449, 531
TspRI CASTG 5 cut(s) 339, 414, 512, 1356, 1372
Tth111I GACNNNGTC 1 cut(s) 569
Van91I CCANNNNNTGG 1 cut(s) 841
VneI GTGCAC 1 cut(s) 320
VpaK11BI GGWCC 2 cut(s) 1171, 1393
VspI ATTAAT 1 cut(s) 444
XapI RAATTY 2 cut(s) 1234, 1301
XhoI CTCGAG 1 cut(s) 864
XmaJI CCTAGG 1 cut(s) 713
XspI CTAG 6 cut(s) 416, 600, 714, 1056, 1091, 1274
ZrmI AGTACT 2 cut(s) 598, 1339
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.