Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0005184

Physical Location & Seq

Genomic Coordinates Reverse (-)

16074963 .. 16081581

Gene Structure 6619 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G243400.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2925 bp

ATGAAATTTTTTTTAGGTTTGATGGACTCGAACAATTTGGATGGTGGAGTGGATGCTAAAGGGATGGATGATCTGAAGGAGCCTCTGTTGAAGCCTTTGGATATTAATAACAAAGATAAAAGGATTAGAACAGTTAAGTTCAAAATAGGGGATATCGAGTGTGCATCTTGTGCAACTACCATTGAATCTGTGCTCGGAAAGCTTGACGGGGTCAAGAATGCAACAGTGTCGCCCATTCAAGGCCAAGCTGCAGTCAATTATATACCAGAGCTCATTACTGCAAAAAAAATTAAGGAAGCCATAGAAGATGCAGGTTTCCCAGTTGATGAGTTTCCAGAACAAGATGTAGCAGTCACCCAGCTTAGGATAAAAGGAATGGCATGCACCAGCTGCTCGGAGTCTGTTGAATCTGCCCTTCGAATGATTGCTGGAGTGAAAAATGCAGTTGTTGGTCTAGCCCTTGAAGAAGCAAAGGTTCACTTTGATCCAAGCCTCACTGACACCAGTTGCATTATTCAAGCAATTGAAGATGCTGGCTTTGGGGCTGATCTCATTAGTTCTGGGAATGATGTAAACAAAGTTCATCTAAAACTTGAAGGAGTTAATTCTCCGGAGGATATGAGTATTGTCCAATCCTCCCTTGAATCAGTTGAAGGTGTAAATAATGTTGAAGTGGATTTCGCAGAAAAAAAGGTGACTATTGCCTACGATTCAAACCTCACAGGTCCAAGATCTCTTATACACTGTGTCGAAAAAGCCGGCCGTGACCTCAAATTGTACCAGGCAAGCTTGTATGTCCCTCCAAGACGAAGAGAAGCTGAGCAGAAACATGAGATTCAGATGTACAGGAACCAGTTTTTCCTGAGCTGCCTATTTTCAGTTCCTATATTCTTTTTCTCAATGGTTCTTCCTATGCTTCCTCCATATGGTAACTGGTTAGAATACAAGGTTCACAACACGCTTACTGTAGGGATGCTTTTAAGATGGATTCTTTGCACACCAGTGCAGTTCATTGTCGGCCGGAGGTTTTATGTGGGATCGTATCATGCATTAAGACGTAGATCAGCTAATATGGATGTTCTTGTTGCACTGGGAACCAATGTTGCTTATTTTTACTCTGTCTATATAGCAATGAAAGCATTGGCTTTGGATAAATTTGAAGGGCAAGATTTCTTTGAAACTAGTTCTATGTTGATATCCTTTATACTCCTGGGGAAGTTCTTAGAAGTTATAGCTAAAGGGAAGACATCCGATGCTTTAGCGAAGCTGACTGACCTTGCTCCTGATACAGCTTATCTGTTGTCATTGGATGATGATGGAAATGTTATCTCCGAGATGGAAATTAGCACTCAACTTATTCAAAGAAATGATATACTCAAGATTGTTCCAGGGGCAAAAGTTCCTGCTGATGGGATTGTAGTTAGTGGTCAAAGCTATGTGAATGAGAGTATGATTACAGGAGAGGCACGGCCTATTGCTAAAAGACTCGGTGACAAGGTTATTGGTGGCACCATCAATGAGAATGGATGCTTACAGGTGAAGGCAACTCACGTTGGTGCAGAGACTGCACTGTCCCAGATAGTTCAACTCGTTGAAGCAGCGCAGCTTGCCAGAGCACCTGTTCAGAAACTAGCTGACCAGATTTCGAAGTTTTTTGTTCCAACAGTAGTCATTGCCGCATTTTTAACATGGCTGGGATGGTTCATCCTTGGAGAATTTGGTCTTTACCCAAAACATTGGATACCAAAAGGCATGGATAAATTTGAGCTGGCATTACAGTTTGGTATCTCGGTGCTAGTGGTTGCTTGCCCTTGTGCTTTGGGATTAGCAACCCCGACTGCAGTAATGGTTGCAACAGGGAAGGGTGCTTCACAAGGTGTTCTCATCAAGGGTGGAAATTCACTTGAAAAGGCTCATAAGGTGAAAACAGTTGTTTTTGATAAAACTGGGACACTGACAGTTGGGAAACCAGAAGTAGTCAGTGCTGTGCTCTTTTCCAATTACTCAATGGAGGAGTTCTGTGCTGTGGCGACTGCTGCAGAGGCAAATAGTGAACACCCAATAGCAAAATCCATTGTGGAGCATGCTAAGAGGCTGCTCATGAAGTTTGGATCAACTGAGCATGTGATGGAGGCTAAGGACTTTGAGGTACACACAGGAGCTGGGGTTCGTGGAAGAGTTGGTGACAAAATGGTTTTGGTTGGGAACAAGAGGCTCATGCGGGATTGTAATGTCCAGGTTCGTCCCGAGGTTGAGGAATATGTTTCGGAAAATGAAAAACTGGCTCGAACTTGTGTGCTGGTTGCCATTGATGGAAAGGTTGCTGGATCTTTTGCTGTAACTGATCCAGTGAAGCCAGAGGCTGTGCGAGTCATCTCTTATCTTCACTCAATGAGCATTTCAAGCATCATGGTTACTGGTGATAACTGGGCTACAGCAGCAGCTATTGCAAAGGAGGTTGGCATTGACAAGGTGTTTGCTGAGACAGATCCACTGGGAAAAGCTGATAGAATCAAAGAATTACAGTTGAAAGGACTGACAGTGGCAATGGTGGGAGATGGAATCAATGACTCTCCAGCTTTGGTTGCAGCAGATGTTGGGATGGCAATTGGTGCTGGTACCGACGTAGCTATCGAAGCAGCAGATATAGTTCTGATGAAGAGCAATTTGGAAGATGTAGTTACAGCCATACATCTCTCTAGAAAGACCATGTCTCGTATTCGTTTGAATTATGTCTGGGCCTTGGGCTACAATATCCTTGGCATGCCAATTGCTGCTGGAGTCTTGTTCCCTTTTACTGGAATTCGATTACCACCATGGCTTGCAGGTGCCTGTATGGCTGCTTCATCTCTAAGTGTGGTATGTTCTTCTCTCCTGTTGCAGTCTTATAAGAAGCCTTTGCATATCTCCGCCAAGTCTGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

ko01524 ko04016 map01524 map04016

Pfam Domains

Protein Families

E1-E2_ATPase HMA Hydrolase

Protein Analysis

975

Amino Acids

105.29

Weight (kDa)

6.06

Isoelectric Point (pI)

35.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005184)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g29190 FvH4_3g29190 FvH4_3g29190 FvH4_3g29190 FvH4_3g29190
malus_domestica	MD11G1199600.v1.1
prunus_persica	Prupe.4G243400_v2.0.a1 Prupe.4G243400_v2.0.a1 Prupe.4G243400_v2.0.a1 Prupe.4G243400_v2.0.a1 Prupe.4G243400_v2.0.a1 Prupe.4G243400_v2.0.a1
pyrus_communis	pycom11g17250
rosa_chinensis	RchiOBHm_Chr5g0053501 RchiOBHm_Chr5g0053621
rosa_laevigata	RLG00000034888 RLG00000034889 RLG00000034890
rosa_multiflora	Rmu_co8389717.1_g000001 Rmu_sc0003228.1_g000003 Rmu_sc0005966.1_g000022
rosa_roxburghii	Rroxscaffold_1G00026920
rosa_rugosa	Rorug05G0280400 Rorug05G0280500
rosa_samantha	Rh5AG351600 Rh5AG352300 Rh5BG363900 Rh5CG388200 Rh5DG378500
rosa_wichuraiana	Rw5G033260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2889
AarI	CACCTGC	1 cut(s)	2816
AasI	GACNNNNNNGTC	1 cut(s)	1570
Acc36I	ACCTGC	2 cut(s)	302, 2816
Acc65I	GGTACC	1 cut(s)	2618
AccB1I	GGYRCC	3 cut(s)	1508, 2618, 2828
AccIII	TCCGGA	1 cut(s)	610
AciI	CCGC	3 cut(s)	1677, 2221, 2910
AclWI	GGATC	6 cut(s)	479, 1045, 2119, 2335, 2339, 2483
AcoI	YGGCCR	2 cut(s)	760, 1018
AcsI	RAATTY	6 cut(s)	5, 1154, 1715, 1760, 1897, 2802
AcuI	CTGAAG	1 cut(s)	95
AdeI	CACNNNGTG	1 cut(s)	1877
AfaI	GTAC	4 cut(s)	779, 845, 2151, 2620
AfiI	CCNNNNNNNGG	5 cut(s)	239, 363, 926, 1409, 2798
AhlI	ACTAGT	1 cut(s)	1181
AjnI	CCWGG	4 cut(s)	780, 1209, 1387, 2235
AjuI	GAANNNNNNNTTGG	2 cut(s)	2651, 2683
AleI	CACNNNNGTG	2 cut(s)	1001, 1554
AloI	GAACNNNNNNTCC	2 cut(s)	2151, 2183
Alw21I	GWGCWC	4 cut(s)	195, 273, 1618, 1992
Alw26I	GTCTC	3 cut(s)	1556, 2477, 2718
AlwI	GGATC	6 cut(s)	479, 1045, 2119, 2335, 2339, 2483
AlwNI	CAGNNNCTG	3 cut(s)	1565, 2162, 2363
Ama87I	CYCGRG	1 cut(s)	2246
Aor13HI	TCCGGA	1 cut(s)	610
AoxI	GGCC	5 cut(s)	241, 760, 1018, 1469, 2739
ApoI	RAATTY	6 cut(s)	5, 1154, 1715, 1760, 1897, 2802
ArsI	GACNNNNNNTTYG	2 cut(s)	2459, 2491
AseI	ATTAAT	1 cut(s)	105
Asp718I	GGTACC	1 cut(s)	2618
AspLEI	GCGC	1 cut(s)	1603
AspS9I	GGNCC	2 cut(s)	725, 2739
AsuHPI	GGTGA	7 cut(s)	346, 706, 1502, 1549, 1933, 2195, 2432
AsuII	TTCGAA	2 cut(s)	418, 1646
AvaI	CYCGRG	1 cut(s)	2246
AvaII	GGWCC	1 cut(s)	725
BaeI	ACNNNNGTAYC	2 cut(s)	2610, 2643
BanI	GGYRCC	3 cut(s)	1508, 2618, 2828
BanII	GRGCYC	1 cut(s)	273
BarI	GAAGNNNNNNTAC	2 cut(s)	2827, 2859
BbsI	GAAGAC	1 cut(s)	1250
Bbv12I	GWGCWC	4 cut(s)	195, 273, 1618, 1992
BceAI	ACGGC	2 cut(s)	747, 1484
BcgI	CGANNNNNNTGC	2 cut(s)	210, 244
BciT130I	CCWGG	4 cut(s)	782, 1211, 1389, 2237
BciVI	GTATCC	1 cut(s)	1734
BcoDI	GTCTC	3 cut(s)	1556, 2477, 2718
BcuI	ACTAGT	1 cut(s)	1181
BfaI	CTAG	5 cut(s)	455, 1182, 1631, 1796, 2700
BfmI	CTRYAG	5 cut(s)	249, 966, 1839, 2037, 2433
BfuAI	ACCTGC	2 cut(s)	302, 2816
BfuI	GTATCC	1 cut(s)	1734
BglI	GCCNNNNNGGC	1 cut(s)	2837
BglII	AGATCT	1 cut(s)	731
BlpI	GCTNAGC	1 cut(s)	819
Bme1390I	CCNGG	4 cut(s)	782, 1211, 1389, 2237
Bme18I	GGWCC	1 cut(s)	725
BmeT110I	CYCGRG	1 cut(s)	2246
BmgT120I	GGNCC	2 cut(s)	725, 2739
BmiI	GGNNCC	6 cut(s)	81, 851, 1096, 1510, 2620, 2830
BmrFI	CCNGG	4 cut(s)	782, 1211, 1389, 2237
BmrI	ACTGGG	5 cut(s)	314, 1100, 1956, 2437, 2504
BmsI	GCATC	8 cut(s)	43, 173, 298, 520, 963, 1243, 1517, 2415
BmuI	ACTGGG	5 cut(s)	314, 1100, 1956, 2437, 2504
BpiI	GAAGAC	1 cut(s)	1250
BpmI	CTGGAG	3 cut(s)	450, 2559, 2799
Bpu10I	CCTNAGC	3 cut(s)	362, 863, 2136
Bpu1102I	GCTNAGC	1 cut(s)	819
Bpu14I	TTCGAA	2 cut(s)	418, 1646
BpuEI	CTTGAG	1 cut(s)	1361
BsaJI	CCNNGG	7 cut(s)	1210, 1388, 1708, 2247, 2742, 2758, 2816
BsaWI	WCCGGW	1 cut(s)	610
BsaXI	ACNNNNNCTCC	4 cut(s)	71, 101, 2151, 2181
Bsc4I	CCNNNNNNNGG	5 cut(s)	239, 363, 926, 1409, 2798
Bse118I	RCCGGY	1 cut(s)	758
Bse3DI	GCAATG	3 cut(s)	1137, 1671, 2553
BseAI	TCCGGA	1 cut(s)	610
BseBI	CCWGG	4 cut(s)	782, 1211, 1389, 2237
BseDI	CCNNGG	7 cut(s)	1210, 1388, 1708, 2247, 2742, 2758, 2816
BseLI	CCNNNNNNNGG	5 cut(s)	239, 363, 926, 1409, 2798
BseMI	GCAATG	3 cut(s)	1137, 1671, 2553
BseMII	CTCAG	4 cut(s)	810, 854, 2109, 2472
BseRI	GAGGAG	1 cut(s)	2027
BseX3I	CGGCCG	2 cut(s)	760, 1018
BseYI	CCCAGC	3 cut(s)	357, 1693, 2162
BsgI	GTGCAG	3 cut(s)	1025, 1551, 1578
Bsh1285I	CGRYCG	2 cut(s)	763, 1021
BshFI	GGCC	5 cut(s)	243, 762, 1020, 1471, 2741
BshNI	GGYRCC	3 cut(s)	1508, 2618, 2828
BsiEI	CGRYCG	2 cut(s)	763, 1021
BsiHKAI	GWGCWC	4 cut(s)	195, 273, 1618, 1992
BsiHKCI	CYCGRG	1 cut(s)	2246
BsiSI	CCGG	3 cut(s)	611, 759, 1021
BslFI	GGGAC	4 cut(s)	782, 1558, 1963, 2229
BslI	CCNNNNNNNGG	5 cut(s)	239, 363, 926, 1409, 2798
BsmAI	GTCTC	3 cut(s)	1556, 2477, 2718
BsmFI	GGGAC	4 cut(s)	782, 1558, 1963, 2229
BsmI	GAATGC	1 cut(s)	223
BsnI	GGCC	5 cut(s)	243, 762, 1020, 1471, 2741
BsoBI	CYCGRG	1 cut(s)	2246
Bsp119I	TTCGAA	2 cut(s)	418, 1646
Bsp1286I	GDGCHC	4 cut(s)	195, 273, 1618, 1992
Bsp13I	TCCGGA	1 cut(s)	610
Bsp1407I	TGTACA	1 cut(s)	843
Bsp1720I	GCTNAGC	1 cut(s)	819
Bsp19I	CCATGG	1 cut(s)	2816
BspACI	CCGC	3 cut(s)	1677, 2221, 2910
BspANI	GGCC	5 cut(s)	243, 762, 1020, 1471, 2741
BspCNI	CTCAG	4 cut(s)	811, 855, 2110, 2473
BspEI	TCCGGA	1 cut(s)	610
BspHI	TCATGA	1 cut(s)	2100
BspLI	GGNNCC	6 cut(s)	81, 851, 1096, 1510, 2620, 2830
BspMAI	CTGCAG	3 cut(s)	253, 1843, 2041
BspMI	ACCTGC	2 cut(s)	302, 2816
BspPI	GGATC	6 cut(s)	479, 1045, 2119, 2335, 2339, 2483
BspQI	GCTCTTC	1 cut(s)	2654
BspT104I	TTCGAA	2 cut(s)	418, 1646
BspT107I	GGYRCC	3 cut(s)	1508, 2618, 2828
BsrDI	GCAATG	3 cut(s)	1137, 1671, 2553
BsrFI	RCCGGY	1 cut(s)	758
BsrGI	TGTACA	1 cut(s)	843
BssAI	RCCGGY	1 cut(s)	758
BssECI	CCNNGG	7 cut(s)	1210, 1388, 1708, 2247, 2742, 2758, 2816
BssT1I	CCWWGG	4 cut(s)	1708, 2742, 2758, 2816
Bst2UI	CCWGG	4 cut(s)	782, 1211, 1389, 2237
Bst6I	CTCTTC	3 cut(s)	805, 2170, 2654
BstAPI	GCANNNNNTGC	5 cut(s)	170, 390, 1565, 2447, 2612
BstAUI	TGTACA	1 cut(s)	843
BstBI	TTCGAA	2 cut(s)	418, 1646
BstDEI	CTNAG	9 cut(s)	362, 819, 863, 1222, 2088, 2118, 2136, 2481, 2852
BstDSI	CCRYGG	1 cut(s)	2816
BstHHI	GCGC	1 cut(s)	1603
BstMAI	GTCTC	3 cut(s)	1556, 2477, 2718
BstMCI	CGRYCG	2 cut(s)	763, 1021
BstNI	CCWGG	4 cut(s)	782, 1211, 1389, 2237
BstNSI	RCATGY	4 cut(s)	384, 2087, 2126, 2767
BstSCI	CCNGG	4 cut(s)	780, 1209, 1387, 2235
BstSFI	CTRYAG	5 cut(s)	249, 966, 1839, 2037, 2433
BstV2I	GAAGAC	1 cut(s)	1250
BstX2I	RGATCY	3 cut(s)	731, 2327, 2488
BstXI	CCANNNNNNTGG	1 cut(s)	1737
BstYI	RGATCY	3 cut(s)	731, 2327, 2488
BstZI	CGGCCG	2 cut(s)	760, 1018
BsuI	GTATCC	1 cut(s)	1734
BsuRI	GGCC	5 cut(s)	243, 762, 1020, 1471, 2741
BtgI	CCRYGG	1 cut(s)	2816
BveI	ACCTGC	2 cut(s)	302, 2816
CaiI	CAGNNNCTG	3 cut(s)	1565, 2162, 2363
CciI	TCATGA	1 cut(s)	2100
CfoI	GCGC	1 cut(s)	1603
Cfr10I	RCCGGY	1 cut(s)	758
Cfr13I	GGNCC	2 cut(s)	725, 2739
Csp6I	GTAC	4 cut(s)	778, 844, 2150, 2619
CviQI	GTAC	4 cut(s)	778, 844, 2150, 2619
DdeI	CTNAG	9 cut(s)	362, 819, 863, 1222, 2088, 2118, 2136, 2481, 2852
DraIII	CACNNNGTG	1 cut(s)	1877
DrdI	GACNNNNNNGTC	1 cut(s)	1570
DseDI	GACNNNNNNGTC	1 cut(s)	1570
EaeI	YGGCCR	2 cut(s)	760, 1018
EagI	CGGCCG	2 cut(s)	760, 1018
Eam1104I	CTCTTC	3 cut(s)	805, 2170, 2654
EarI	CTCTTC	3 cut(s)	805, 2170, 2654
EciI	GGCGGA	1 cut(s)	2899
Ecl136II	GAGCTC	1 cut(s)	271
EclXI	CGGCCG	2 cut(s)	760, 1018
Eco130I	CCWWGG	4 cut(s)	1708, 2742, 2758, 2816
Eco24I	GRGCYC	1 cut(s)	273
Eco32I	GATATC	2 cut(s)	154, 1197
Eco47I	GGWCC	1 cut(s)	725
Eco52I	CGGCCG	2 cut(s)	760, 1018
Eco53kI	GAGCTC	1 cut(s)	271
Eco57I	CTGAAG	1 cut(s)	95
Eco88I	CYCGRG	1 cut(s)	2246
EcoICRI	GAGCTC	1 cut(s)	271
EcoRI	GAATTC	1 cut(s)	2802
EcoRII	CCWGG	4 cut(s)	780, 1209, 1387, 2235
EcoRV	GATATC	2 cut(s)	154, 1197
EcoT14I	CCWWGG	4 cut(s)	1708, 2742, 2758, 2816
EcoT22I	ATGCAT	1 cut(s)	1051
EcoT38I	GRGCYC	1 cut(s)	273
ErhI	CCWWGG	4 cut(s)	1708, 2742, 2758, 2816
FalI	AAGNNNNNCTT	2 cut(s)	464, 496
FaqI	GGGAC	4 cut(s)	782, 1558, 1963, 2229
FauI	CCCGC	1 cut(s)	2214
FauNDI	CATATG	1 cut(s)	925
FriOI	GRGCYC	1 cut(s)	273
FspBI	CTAG	5 cut(s)	455, 1182, 1631, 1796, 2700
GlaI	GCGC	1 cut(s)	1602
GsaI	CCCAGC	3 cut(s)	361, 1697, 2166
GsuI	CTGGAG	3 cut(s)	450, 2559, 2799
HaeIII	GGCC	5 cut(s)	243, 762, 1020, 1471, 2741
HapII	CCGG	3 cut(s)	611, 759, 1021
HhaI	GCGC	1 cut(s)	1603
Hin6I	GCGC	1 cut(s)	1601
HinP1I	GCGC	1 cut(s)	1601
HindIII	AAGCTT	2 cut(s)	200, 787
HpaII	CCGG	3 cut(s)	611, 759, 1021
HphI	GGTGA	7 cut(s)	346, 706, 1502, 1549, 1933, 2195, 2432
Hpy166II	GTNNAC	5 cut(s)	478, 574, 952, 2054, 2152
Hpy188I	TCNGA	9 cut(s)	75, 197, 397, 840, 1252, 1333, 1626, 2269, 2655
Hpy188III	TCNNGA	9 cut(s)	214, 335, 611, 862, 1283, 1378, 2101, 2246, 2700
Hpy8I	GTNNAC	5 cut(s)	478, 574, 952, 2054, 2152
Hpy99I	CGWCG	1 cut(s)	2627
HpyAV	CCTTC	7 cut(s)	70, 425, 590, 647, 1154, 1534, 1855
HpyCH4IV	ACGT	3 cut(s)	1057, 1551, 2625
HpyF3I	CTNAG	9 cut(s)	362, 819, 863, 1222, 2088, 2118, 2136, 2481, 2852
HpySE526I	ACGT	3 cut(s)	1057, 1551, 2625
HspAI	GCGC	1 cut(s)	1601
Kpn2I	TCCGGA	1 cut(s)	610
KpnI	GGTACC	1 cut(s)	2622
KroI	GCCGGC	1 cut(s)	758
KroNI	GCCGGC	1 cut(s)	760
LguI	GCTCTTC	1 cut(s)	2654
LmnI	GCTCC	4 cut(s)	79, 1285, 2080, 2159
LweI	GCATC	8 cut(s)	43, 173, 298, 520, 963, 1243, 1517, 2415
MaeI	CTAG	5 cut(s)	455, 1182, 1631, 1796, 2700
MaeII	ACGT	3 cut(s)	1057, 1551, 2625
MaeIII	GTNAC	9 cut(s)	352, 694, 764, 929, 1490, 2183, 2338, 2413, 2680
MfeI	CAATTG	3 cut(s)	522, 2607, 2769
MflI	RGATCY	3 cut(s)	731, 2327, 2488
MhlI	GDGCHC	4 cut(s)	195, 273, 1618, 1992
MlyI	GAGTC	6 cut(s)	20, 407, 1479, 2379, 2564, 2790
MmeI	TCCRAC	1 cut(s)	1685
Mph1103I	ATGCAT	1 cut(s)	1051
MroI	TCCGGA	1 cut(s)	610
MroNI	GCCGGC	1 cut(s)	758
MseI	TTAA	7 cut(s)	105, 135, 291, 603, 980, 1052, 1685
MslI	CAYNNNNRTG	2 cut(s)	1001, 1554
MspA1I	CMGCKG	1 cut(s)	390
MspI	CCGG	3 cut(s)	611, 759, 1021
MspR9I	CCNGG	4 cut(s)	782, 1211, 1389, 2237
MunI	CAATTG	3 cut(s)	522, 2607, 2769
Mva1269I	GAATGC	1 cut(s)	223
MvaI	CCWGG	4 cut(s)	782, 1211, 1389, 2237
NaeI	GCCGGC	1 cut(s)	760
NcoI	CCATGG	1 cut(s)	2816
NdeI	CATATG	1 cut(s)	925
NgoMIV	GCCGGC	1 cut(s)	758
NlaIV	GGNNCC	6 cut(s)	81, 851, 1096, 1510, 2620, 2830
NmuCI	GTSAC	5 cut(s)	352, 694, 764, 1490, 2183
NsiI	ATGCAT	1 cut(s)	1051
NspI	RCATGY	4 cut(s)	384, 2087, 2126, 2767
NspV	TTCGAA	2 cut(s)	418, 1646
OliI	CACNNNNGTG	2 cut(s)	1001, 1554
PaeI	GCATGC	3 cut(s)	384, 2087, 2767
PagI	TCATGA	1 cut(s)	2100
PaqCI	CACCTGC	1 cut(s)	2816
PciSI	GCTCTTC	1 cut(s)	2654
PcsI	WCGNNNNNNNCGW	1 cut(s)	2631
PctI	GAATGC	1 cut(s)	223
PdiI	GCCGGC	1 cut(s)	760
PfeI	GAWTC	8 cut(s)	185, 407, 644, 710, 835, 988, 2511, 2562
PflFI	GACNNNGTC	2 cut(s)	209, 2710
PleI	GAGTC	6 cut(s)	20, 406, 1479, 2378, 2564, 2789
PpsI	GAGTC	6 cut(s)	20, 406, 1479, 2378, 2564, 2789
PshBI	ATTAAT	1 cut(s)	105
PsiI	TTATAA	1 cut(s)	2889
Psp124BI	GAGCTC	1 cut(s)	273
Psp6I	CCWGG	4 cut(s)	780, 1209, 1387, 2235
PspFI	CCCAGC	3 cut(s)	357, 1693, 2162
PspGI	CCWGG	4 cut(s)	780, 1209, 1387, 2235
PspN4I	GGNNCC	6 cut(s)	81, 851, 1096, 1510, 2620, 2830
PspPI	GGNCC	2 cut(s)	725, 2739
PsrI	GAACNNNNNNTAC	2 cut(s)	564, 596
PstI	CTGCAG	3 cut(s)	253, 1843, 2041
PstNI	CAGNNNCTG	3 cut(s)	1565, 2162, 2363
PsuI	RGATCY	3 cut(s)	731, 2327, 2488
PsyI	GACNNNGTC	2 cut(s)	209, 2710
PvuII	CAGCTG	1 cut(s)	390
RsaI	GTAC	4 cut(s)	779, 845, 2151, 2620
RsaNI	GTAC	4 cut(s)	778, 844, 2150, 2619
RseI	CAYNNNNRTG	2 cut(s)	1001, 1554
SacI	GAGCTC	1 cut(s)	273
SapI	GCTCTTC	1 cut(s)	2654
SaqAI	TTAA	7 cut(s)	105, 135, 291, 603, 980, 1052, 1685
Sau96I	GGNCC	2 cut(s)	725, 2739
SchI	GAGTC	6 cut(s)	20, 407, 1479, 2379, 2564, 2790
ScrFI	CCNGG	4 cut(s)	782, 1211, 1389, 2237
SduI	GDGCHC	4 cut(s)	195, 273, 1618, 1992
SfaNI	GCATC	8 cut(s)	43, 173, 298, 520, 963, 1243, 1517, 2415
SfcI	CTRYAG	5 cut(s)	249, 966, 1839, 2037, 2433
SfuI	TTCGAA	2 cut(s)	418, 1646
SinI	GGWCC	1 cut(s)	725
SmiMI	CAYNNNNRTG	2 cut(s)	1001, 1554
SmlI	CTYRAG	1 cut(s)	1376
SmoI	CTYRAG	1 cut(s)	1376
SpeI	ACTAGT	1 cut(s)	1181
SphI	GCATGC	3 cut(s)	384, 2087, 2767
SsiI	CCGC	3 cut(s)	1677, 2221, 2910
SspMI	CTAG	5 cut(s)	455, 1182, 1631, 1796, 2700
SstI	GAGCTC	1 cut(s)	273
StyD4I	CCNGG	4 cut(s)	780, 1209, 1387, 2235
StyI	CCWWGG	4 cut(s)	1708, 2742, 2758, 2816
TaiI	ACGT	3 cut(s)	1060, 1554, 2628
TaqI	TCGA	8 cut(s)	29, 156, 418, 750, 1646, 2287, 2634, 2806
TatI	WGTACW	1 cut(s)	843
TauI	GCSGC	1 cut(s)	1679
TfiI	GAWTC	8 cut(s)	185, 407, 644, 710, 835, 988, 2511, 2562
Tru1I	TTAA	7 cut(s)	105, 135, 291, 603, 980, 1052, 1685
Tru9I	TTAA	7 cut(s)	105, 135, 291, 603, 980, 1052, 1685
TseFI	GTSAC	5 cut(s)	352, 694, 764, 1490, 2183
Tsp45I	GTSAC	5 cut(s)	352, 694, 764, 1490, 2183
TspDTI	ATGAA	9 cut(s)	17, 572, 1000, 1148, 1693, 2117, 2289, 2672, 2835
Tth111I	GACNNNGTC	2 cut(s)	209, 2710
VpaK11BI	GGWCC	1 cut(s)	725
VspI	ATTAAT	1 cut(s)	105
XapI	RAATTY	6 cut(s)	5, 1154, 1715, 1760, 1897, 2802
XbaI	TCTAGA	1 cut(s)	2699
XceI	RCATGY	4 cut(s)	384, 2087, 2126, 2767
XcmI	CCANNNNNNNNNTGG	2 cut(s)	930, 2005
XspI	CTAG	5 cut(s)	455, 1182, 1631, 1796, 2700
Zsp2I	ATGCAT	1 cut(s)	1051

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.