Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0005986

Physical Location & Seq

Genomic Coordinates Reverse (-)

311315 .. 318463

Gene Structure 7149 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G001900.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1398 bp

ATGGTTCTGTACGGACTGTGTTCAATTTCAACCAACAAAGCGATGAATCTCTTGTCTAATTGTGTAAAAATACAGAACTCTGTGAGCCAAGGCGCCCAACCCAATCAAACCCACATGAACTCTCGTCTCAATGGCTCTGCTCGTCTCATGCTAGTCTCAGATCTTGATTACACCATGGTGGATCATGATGAGCCTGAAAATCTGTCTCTTCTGAGGTTCAACGCGCTGTGGGAAGCAAATTACCGCCATGATTCTCTGCTGGTATTTTCAACCGGAAGATCACCAATCACTTACAAACCATTGAGGAATGAGAAACCCTTGCTAACGCCTGATATAACAATCATGTCTGTGGGAACTGAGATTATGTATGGTTATGGTGAGGCTATGGTTCCTGATGATGGGTGGAAGCAACATCTGAATCACAAGTGGGATAGAGACATTGTTGTTGAGGAAACTAATAAATTTCCTCAACTTACTCCTCAGGAAGAGGGAGAGCAACGACCTCACAAGGTTAGCTTTTATGTAGAGAAGGTTGTGGCATCGGAGATAATGAATGTTTTATCACAACGGTTGGAGAAACGTGGGTTAGATGTGAAGATAATTTATAGCAGTGGGATTGCTTTGGACATTTTACCAAAAGGGGCGGGCAAAGGGCAAGCTCTTGCATATTTGTTGAAGAAATTCAAACTTGAGGGGAAGCTTCCCTACAACATTCTGGTTTGTGGTGACTCTGGAAATGATGCCGAACTATTCAGTCTTCCTGAAGTGTATGGTGTGATGGTCAGTAATGCAAAAGAAGAATTGTTGCAGTGGTATGCAGAAAATGCACACAGAAATTCCAATATACTTCATGCAACAGAGAGATGTGCAGCTGGGATAATACAAGCCATTGGAAATTTTCATCTGGGTCCAAATGTATCTCCAAGAGATTTCAAAGATTTCCAAAAGTGCAAAGTGAAGAATTTTAGTCCTGCACATGAGGTTGTAAAGTTCTATTTGTTTTATGAGAGATGGCGGCGTGCAGAAGTGGAGAAATCTGAGCAGTATTTTCAAAACTTGAAATCAGTCTTTCACCCATTGGCTATCTTTGTCCATCCCTTGGGAGTTGAGCTACCTATCCACCAGTGCATGGATGCAATGGCAAAGTCGTATGGAGATAAGCAGGGAAAACAGTTTTGGACATGGGTGGATCGATTATCCTCAGTTCAAATTGGCTCAGACACATGGCTTGTGAAGTTTGATAAGTGGGAATTGAATGATGATGAGCGGCAATGCTCTCTGACTACAGTCCTGATGAGTTCAAAGTCAGAGGTACCGGATGCTTATACTTGGCTGCACATGCATCAAACATGGTTCGATGGTGTAGAACTTAAAGAACCAGAAAGATGGGTATTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00500 map00500

Pfam Domains

Protein Families

S6PP S6PP_C

Protein Analysis

466

Amino Acids

53.33

Weight (kDa)

6.13

Isoelectric Point (pI)

37.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005986)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54270
fragaria_vesca	FvH4_7g05160 FvH4_7g05160 FvH4_7g05160 FvH4_7g05160 FvH4_7g05160 FvH4_7g05160
malus_domestica	MD02G1260600.v1.1 MD02G1260700.v1.1
prunus_persica	Prupe.5G001900_v2.0.a1 Prupe.5G001900_v2.0.a1 Prupe.5G001900_v2.0.a1 Prupe.5G001900_v2.0.a1 Prupe.5G001900_v2.0.a1 Prupe.5G001900_v2.0.a1
pyrus_communis	pycom02g22250
rosa_chinensis	RchiOBHm_Chr1g0331691
rosa_laevigata	RLG00000029723
rosa_multiflora	Rmu_sc0005044.1_g000009
rosa_roxburghii	Rroxscaffold_4G00318910 Rroxscaffold_5G00341870
rosa_rugosa	Rorug01G0095400
rosa_samantha	Rh1AG119300 Rh1BG090800 Rh1CG114400 Rh1DG124800
rosa_wichuraiana	Rw1G009640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1312
AccB1I	GGYRCC	2 cut(s)	92, 1312
AccB7I	CCANNNNNTGG	2 cut(s)	1099, 1129
AccBSI	CCGCTC	1 cut(s)	1267
AccII	CGCG	1 cut(s)	224
AciI	CCGC	4 cut(s)	244, 644, 1015, 1267
AclWI	GGATC	2 cut(s)	189, 1197
AcsI	RAATTY	5 cut(s)	461, 680, 835, 895, 961
AcuI	CTGAAG	1 cut(s)	783
AcyI	GRCGYC	1 cut(s)	93
AfaI	GTAC	2 cut(s)	11, 1314
AfiI	CCNNNNNNNGG	3 cut(s)	398, 1099, 1129
AjuI	GAANNNNNNNTTGG	2 cut(s)	1159, 1191
AleI	CACNNNNGTG	1 cut(s)	176
AluBI	AGCT	5 cut(s)	516, 659, 700, 872, 1111
AluI	AGCT	5 cut(s)	516, 659, 700, 872, 1111
Alw26I	GTCTC	5 cut(s)	131, 149, 160, 210, 429
AlwI	GGATC	2 cut(s)	189, 1197
ApeKI	GCWGC	2 cut(s)	869, 1333
ApoI	RAATTY	5 cut(s)	461, 680, 835, 895, 961
Asp700I	GAANNNNTTC	1 cut(s)	680
Asp718I	GGTACC	1 cut(s)	1312
AspLEI	GCGC	2 cut(s)	95, 226
AspS9I	GGNCC	1 cut(s)	908
AsuHPI	GGTGA	4 cut(s)	273, 389, 737, 1064
AvaII	GGWCC	1 cut(s)	908
AxyI	CCTNAGG	1 cut(s)	480
BanI	GGYRCC	2 cut(s)	92, 1312
BarI	GAAGNNNNNNTAC	2 cut(s)	689, 721
BbsI	GAAGAC	1 cut(s)	749
BbvI	GCAGC	2 cut(s)	881, 1320
BccI	CCATC	6 cut(s)	392, 772, 1005, 1101, 1352, 1380
BcoDI	GTCTC	5 cut(s)	131, 149, 160, 210, 429
BfaI	CTAG	2 cut(s)	152, 1396
BfmI	CTRYAG	1 cut(s)	1284
BfoI	RGCGCY	1 cut(s)	96
BglII	AGATCT	1 cut(s)	160
BisI	GCNGC	4 cut(s)	870, 1016, 1268, 1334
BlsI	GCNGC	4 cut(s)	871, 1017, 1269, 1335
Bme18I	GGWCC	1 cut(s)	908
BmgT120I	GGNCC	1 cut(s)	908
BmiI	GGNNCC	4 cut(s)	94, 390, 909, 1314
BmsI	GCATC	5 cut(s)	548, 730, 1123, 1309, 1351
BoxI	GACNNNNGTC	1 cut(s)	1286
BpiI	GAAGAC	1 cut(s)	749
BpuEI	CTTGAG	1 cut(s)	710
Bsa29I	ATCGAT	1 cut(s)	1192
BsaHI	GRCGYC	1 cut(s)	93
BsaJI	CCNNGG	3 cut(s)	88, 174, 1098
BsaWI	WCCGGW	2 cut(s)	272, 1315
Bsc4I	CCNNNNNNNGG	3 cut(s)	398, 1099, 1129
Bse1I	ACTGG	1 cut(s)	1123
Bse21I	CCTNAGG	1 cut(s)	480
Bse3DI	GCAATG	2 cut(s)	1143, 1277
BseCI	ATCGAT	1 cut(s)	1192
BseDI	CCNNGG	3 cut(s)	88, 174, 1098
BseGI	GGATG	3 cut(s)	1093, 1138, 1324
BseLI	CCNNNNNNNGG	3 cut(s)	398, 1099, 1129
BseMI	GCAATG	2 cut(s)	1143, 1277
BseMII	CTCAG	7 cut(s)	171, 203, 348, 494, 1029, 1215, 1230
BseNI	ACTGG	1 cut(s)	1123
BseRI	GAGGAG	1 cut(s)	468
BseXI	GCAGC	2 cut(s)	881, 1320
BseYI	CCCAGC	1 cut(s)	872
BsgI	GTGCAG	4 cut(s)	888, 957, 1041, 1319
Bsh1236I	CGCG	1 cut(s)	224
BshNI	GGYRCC	2 cut(s)	92, 1312
BshVI	ATCGAT	1 cut(s)	1192
BsiSI	CCGG	2 cut(s)	273, 1316
BslI	CCNNNNNNNGG	3 cut(s)	398, 1099, 1129
BsmAI	GTCTC	5 cut(s)	131, 149, 160, 210, 429
BsmBI	CGTCTC	2 cut(s)	131, 149
Bsp143I	GATC	4 cut(s)	160, 181, 278, 1189
Bsp19I	CCATGG	1 cut(s)	174
BspACI	CCGC	4 cut(s)	244, 644, 1015, 1267
BspCNI	CTCAG	7 cut(s)	170, 204, 349, 493, 1030, 1214, 1229
BspDI	ATCGAT	1 cut(s)	1192
BspFNI	CGCG	1 cut(s)	224
BspHI	TCATGA	1 cut(s)	184
BspLI	GGNNCC	4 cut(s)	94, 390, 909, 1314
BspPI	GGATC	2 cut(s)	189, 1197
BspT107I	GGYRCC	2 cut(s)	92, 1312
BsrBI	CCGCTC	1 cut(s)	1267
BsrDI	GCAATG	2 cut(s)	1143, 1277
BsrI	ACTGG	1 cut(s)	1123
BssECI	CCNNGG	3 cut(s)	88, 174, 1098
BssMI	GATC	4 cut(s)	160, 181, 278, 1189
BssNI	GRCGYC	1 cut(s)	93
BssT1I	CCWWGG	3 cut(s)	88, 174, 1098
Bst4CI	ACNGT	4 cut(s)	18, 570, 1173, 1288
Bst6I	CTCTTC	2 cut(s)	213, 480
BstACI	GRCGYC	1 cut(s)	93
BstAPI	GCANNNNNTGC	1 cut(s)	824
BstC8I	GCNNGC	3 cut(s)	646, 657, 1020
BstDEI	CTNAG	7 cut(s)	157, 212, 357, 480, 1038, 1201, 1216
BstDSI	CCRYGG	1 cut(s)	174
BstF5I	GGATG	3 cut(s)	1093, 1138, 1324
BstFNI	CGCG	1 cut(s)	224
BstH2I	RGCGCY	1 cut(s)	96
BstHHI	GCGC	2 cut(s)	95, 226
BstKTI	GATC	4 cut(s)	163, 184, 281, 1192
BstMAI	GTCTC	5 cut(s)	131, 149, 160, 210, 429
BstMBI	GATC	4 cut(s)	160, 181, 278, 1189
BstMWI	GCNNNNNNNGC	2 cut(s)	824, 1339
BstNSI	RCATGY	1 cut(s)	1342
BstPAI	GACNNNNGTC	1 cut(s)	1286
BstSFI	CTRYAG	1 cut(s)	1284
BstUI	CGCG	1 cut(s)	224
BstV1I	GCAGC	2 cut(s)	881, 1320
BstV2I	GAAGAC	1 cut(s)	749
BstX2I	RGATCY	1 cut(s)	160
BstXI	CCANNNNNNTGG	1 cut(s)	1386
BstYI	RGATCY	1 cut(s)	160
Bsu15I	ATCGAT	1 cut(s)	1192
Bsu36I	CCTNAGG	1 cut(s)	480
BsuTUI	ATCGAT	1 cut(s)	1192
BtgI	CCRYGG	1 cut(s)	174
BtgZI	GCGATG	1 cut(s)	56
BtsCI	GGATG	3 cut(s)	1093, 1138, 1324
BtsI	GCAGTG	2 cut(s)	616, 815
BtsIMutI	CAGTG	3 cut(s)	616, 815, 1130
Cac8I	GCNNGC	3 cut(s)	646, 657, 1020
CciI	TCATGA	1 cut(s)	184
CfoI	GCGC	2 cut(s)	95, 226
Cfr13I	GGNCC	1 cut(s)	908
ClaI	ATCGAT	1 cut(s)	1192
Csp6I	GTAC	2 cut(s)	10, 1313
CviQI	GTAC	2 cut(s)	10, 1313
DdeI	CTNAG	7 cut(s)	157, 212, 357, 480, 1038, 1201, 1216
DinI	GGCGCC	1 cut(s)	94
DpnI	GATC	4 cut(s)	162, 183, 280, 1191
DpnII	GATC	4 cut(s)	160, 181, 278, 1189
Eam1104I	CTCTTC	2 cut(s)	213, 480
EarI	CTCTTC	2 cut(s)	213, 480
Eco130I	CCWWGG	3 cut(s)	88, 174, 1098
Eco47I	GGWCC	1 cut(s)	908
Eco57I	CTGAAG	1 cut(s)	783
Eco81I	CCTNAGG	1 cut(s)	480
EcoT14I	CCWWGG	3 cut(s)	88, 174, 1098
EcoT22I	ATGCAT	1 cut(s)	1344
EgeI	GGCGCC	1 cut(s)	94
EheI	GGCGCC	1 cut(s)	94
ErhI	CCWWGG	3 cut(s)	88, 174, 1098
Esp3I	CGTCTC	2 cut(s)	131, 149
FalI	AAGNNNNNCTT	2 cut(s)	500, 532
FauI	CCCGC	1 cut(s)	637
Fnu4HI	GCNGC	4 cut(s)	870, 1016, 1268, 1334
FokI	GGATG	3 cut(s)	1080, 1145, 1331
Fsp4HI	GCNGC	4 cut(s)	870, 1016, 1268, 1334
FspBI	CTAG	2 cut(s)	152, 1396
GlaI	GCGC	2 cut(s)	94, 225
GluI	GCNGC	4 cut(s)	870, 1016, 1268, 1334
GsaI	CCCAGC	1 cut(s)	876
HaeII	RGCGCY	1 cut(s)	96
HapII	CCGG	2 cut(s)	273, 1316
HhaI	GCGC	2 cut(s)	95, 226
Hin1I	GRCGYC	1 cut(s)	93
Hin6I	GCGC	2 cut(s)	93, 224
HinP1I	GCGC	2 cut(s)	93, 224
HindIII	AAGCTT	1 cut(s)	698
HinfI	GANTC	4 cut(s)	46, 251, 418, 728
HpaII	CCGG	2 cut(s)	273, 1316
HphI	GGTGA	4 cut(s)	273, 389, 737, 1064
Hpy188I	TCNGA	8 cut(s)	160, 213, 417, 544, 1039, 1219, 1281, 1309
Hpy188III	TCNNGA	7 cut(s)	164, 185, 392, 482, 732, 761, 1291
HpyAV	CCTTC	1 cut(s)	523
HpyCH4III	ACNGT	4 cut(s)	18, 570, 1173, 1288
HpyCH4IV	ACGT	1 cut(s)	580
HpyF10VI	GCNNNNNNNGC	2 cut(s)	824, 1339
HpyF3I	CTNAG	7 cut(s)	157, 212, 357, 480, 1038, 1201, 1216
HpySE526I	ACGT	1 cut(s)	580
Hsp92I	GRCGYC	1 cut(s)	93
HspAI	GCGC	2 cut(s)	93, 224
KasI	GGCGCC	1 cut(s)	92
KpnI	GGTACC	1 cut(s)	1316
Kzo9I	GATC	4 cut(s)	160, 181, 278, 1189
Lsp1109I	GCAGC	2 cut(s)	881, 1320
LweI	GCATC	5 cut(s)	548, 730, 1123, 1309, 1351
MaeI	CTAG	2 cut(s)	152, 1396
MaeII	ACGT	1 cut(s)	580
MaeIII	GTNAC	1 cut(s)	725
MalI	GATC	4 cut(s)	162, 183, 280, 1191
MbiI	CCGCTC	1 cut(s)	1267
MboI	GATC	4 cut(s)	160, 181, 278, 1189
MboII	GAAGA	8 cut(s)	200, 288, 497, 607, 688, 749, 809, 970
MflI	RGATCY	1 cut(s)	160
Mly113I	GGCGCC	1 cut(s)	93
MlyI	GAGTC	1 cut(s)	722
MmeI	TCCRAC	1 cut(s)	552
Mph1103I	ATGCAT	1 cut(s)	1344
MroXI	GAANNNNTTC	1 cut(s)	680
MseI	TTAA	1 cut(s)	1371
MslI	CAYNNNNRTG	2 cut(s)	176, 347
MspA1I	CMGCKG	1 cut(s)	872
MspI	CCGG	2 cut(s)	273, 1316
MvnI	CGCG	1 cut(s)	224
MwoI	GCNNNNNNNGC	2 cut(s)	824, 1339
NarI	GGCGCC	1 cut(s)	93
NcoI	CCATGG	1 cut(s)	174
NdeII	GATC	4 cut(s)	160, 181, 278, 1189
NlaIV	GGNNCC	4 cut(s)	94, 390, 909, 1314
NmuCI	GTSAC	1 cut(s)	725
NsiI	ATGCAT	1 cut(s)	1344
NspI	RCATGY	1 cut(s)	1342
OliI	CACNNNNGTG	1 cut(s)	176
PagI	TCATGA	1 cut(s)	184
PdmI	GAANNNNTTC	1 cut(s)	680
PfeI	GAWTC	3 cut(s)	46, 251, 418
PflMI	CCANNNNNTGG	2 cut(s)	1099, 1129
PkrI	GCNGC	4 cut(s)	871, 1017, 1269, 1335
PleI	GAGTC	1 cut(s)	722
PluTI	GGCGCC	1 cut(s)	96
PpsI	GAGTC	1 cut(s)	722
PshAI	GACNNNNGTC	1 cut(s)	1286
PspFI	CCCAGC	1 cut(s)	872
PspN4I	GGNNCC	4 cut(s)	94, 390, 909, 1314
PspPI	GGNCC	1 cut(s)	908
PsuI	RGATCY	1 cut(s)	160
PvuII	CAGCTG	1 cut(s)	872
RsaI	GTAC	2 cut(s)	11, 1314
RsaNI	GTAC	2 cut(s)	10, 1313
RseI	CAYNNNNRTG	2 cut(s)	176, 347
SaqAI	TTAA	1 cut(s)	1371
SatI	GCNGC	4 cut(s)	870, 1016, 1268, 1334
Sau3AI	GATC	4 cut(s)	160, 181, 278, 1189
Sau96I	GGNCC	1 cut(s)	908
SchI	GAGTC	1 cut(s)	722
SfaNI	GCATC	5 cut(s)	548, 730, 1123, 1309, 1351
SfcI	CTRYAG	1 cut(s)	1284
SfoI	GGCGCC	1 cut(s)	94
SinI	GGWCC	1 cut(s)	908
SmiMI	CAYNNNNRTG	2 cut(s)	176, 347
SmlI	CTYRAG	1 cut(s)	689
SmoI	CTYRAG	1 cut(s)	689
SsiI	CCGC	4 cut(s)	244, 644, 1015, 1267
SspDI	GGCGCC	1 cut(s)	92
SspMI	CTAG	2 cut(s)	152, 1396
StyI	CCWWGG	3 cut(s)	88, 174, 1098
TaaI	ACNGT	4 cut(s)	18, 570, 1173, 1288
TaiI	ACGT	1 cut(s)	583
TaqI	TCGA	2 cut(s)	1192, 1356
TauI	GCSGC	2 cut(s)	1018, 1270
TfiI	GAWTC	3 cut(s)	46, 251, 418
Tru1I	TTAA	1 cut(s)	1371
Tru9I	TTAA	1 cut(s)	1371
TscAI	CASTG	3 cut(s)	616, 815, 1130
TseFI	GTSAC	1 cut(s)	725
TseI	GCWGC	2 cut(s)	869, 1333
Tsp45I	GTSAC	1 cut(s)	725
TspDTI	ATGAA	5 cut(s)	59, 131, 566, 839, 890
TspGWI	ACGGA	1 cut(s)	27
TspRI	CASTG	3 cut(s)	616, 815, 1130
Van91I	CCANNNNNTGG	2 cut(s)	1099, 1129
VpaK11BI	GGWCC	1 cut(s)	908
XapI	RAATTY	5 cut(s)	461, 680, 835, 895, 961
XceI	RCATGY	1 cut(s)	1342
XmnI	GAANNNNTTC	1 cut(s)	680
XspI	CTAG	2 cut(s)	152, 1396
Zsp2I	ATGCAT	1 cut(s)	1344

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.