RNA-binding protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G46840 AT5G46840 |
| fragaria_vesca | FvH4_5g22460 |
| malus_domestica | MD06G1037000.v1.1 MD16G1272400.v1.1 |
| prunus_persica | Prupe.5G032300_v2.0.a1 |
| pyrus_communis | pycom06g03030 pycom16g24140 |
| rosa_chinensis | RchiOBHm_Chr7g0210251 |
| rosa_laevigata | RLG00000003055 |
| rosa_multiflora | Rmu_co8157162.1_g000001 Rmu_sc0017046.1_g000009 Rmu_sc0018755.1_g000001 Rmu_sc0019437.1_g000002 Rmu_sc0032647.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00248520 |
| rosa_rugosa | Rorug07G0120000 |
| rosa_samantha | Rh7AG252900 Rh7BG248000 Rh7CG269900 Rh7DG260500 |
| rosa_wichuraiana | Rw7G021510 Rw7G021530 Rw7G021560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 98 |
| Acc36I | ACCTGC | 1 cut(s) | 1400 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 925 |
| AccI | GTMKAC | 1 cut(s) | 1453 |
| AciI | CCGC | 3 cut(s) | 188, 465, 482 |
| AclI | AACGTT | 2 cut(s) | 195, 1110 |
| AclWI | GGATC | 4 cut(s) | 1130, 1143, 1242, 1312 |
| AcsI | RAATTY | 5 cut(s) | 706, 755, 1198, 1433, 1634 |
| AcuI | CTGAAG | 2 cut(s) | 159, 282 |
| AcyI | GRCGYC | 2 cut(s) | 81, 96 |
| AjnI | CCWGG | 4 cut(s) | 144, 274, 1395, 1417 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1419, 1451 |
| Alw21I | GWGCWC | 2 cut(s) | 1245, 1619 |
| Alw26I | GTCTC | 3 cut(s) | 296, 573, 797 |
| AlwI | GGATC | 4 cut(s) | 1130, 1143, 1242, 1312 |
| Ama87I | CYCGRG | 1 cut(s) | 152 |
| ApeKI | GCWGC | 5 cut(s) | 185, 1001, 1193, 1529, 1565 |
| ApoI | RAATTY | 5 cut(s) | 706, 755, 1198, 1433, 1634 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1119, 1634 |
| AspS9I | GGNCC | 1 cut(s) | 1350 |
| AsuC2I | CCSGG | 2 cut(s) | 153, 154 |
| AsuHPI | GGTGA | 7 cut(s) | 218, 236, 245, 250, 425, 479, 496 |
| AsuII | TTCGAA | 3 cut(s) | 653, 1467, 1554 |
| AvaI | CYCGRG | 1 cut(s) | 152 |
| AvaII | GGWCC | 1 cut(s) | 1350 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1132, 1165 |
| BamHI | GGATCC | 1 cut(s) | 1135 |
| BanII | GRGCYC | 2 cut(s) | 1245, 1619 |
| Bbv12I | GWGCWC | 2 cut(s) | 1245, 1619 |
| BbvI | GCAGC | 5 cut(s) | 172, 988, 1180, 1516, 1552 |
| BccI | CCATC | 6 cut(s) | 464, 487, 491, 616, 1528, 1588 |
| BceAI | ACGGC | 2 cut(s) | 23, 83 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1544, 1578 |
| BciT130I | CCWGG | 4 cut(s) | 146, 276, 1397, 1419 |
| BclI | TGATCA | 2 cut(s) | 738, 1012 |
| BcnI | CCSGG | 2 cut(s) | 153, 154 |
| BcoDI | GTCTC | 3 cut(s) | 296, 573, 797 |
| BfaI | CTAG | 2 cut(s) | 87, 816 |
| BfuAI | ACCTGC | 1 cut(s) | 1400 |
| BglII | AGATCT | 1 cut(s) | 1475 |
| BisI | GCNGC | 5 cut(s) | 186, 1002, 1194, 1530, 1566 |
| BlpI | GCTNAGC | 1 cut(s) | 48 |
| BlsI | GCNGC | 5 cut(s) | 187, 1003, 1195, 1531, 1567 |
| Bme1390I | CCNGG | 6 cut(s) | 146, 153, 154, 276, 1397, 1419 |
| Bme18I | GGWCC | 1 cut(s) | 1350 |
| BmeT110I | CYCGRG | 1 cut(s) | 152 |
| BmgT120I | GGNCC | 1 cut(s) | 1350 |
| BmiI | GGNNCC | 4 cut(s) | 24, 150, 1137, 1352 |
| BmrFI | CCNGG | 6 cut(s) | 146, 153, 154, 276, 1397, 1419 |
| BmsI | GCATC | 1 cut(s) | 1556 |
| BpmI | CTGGAG | 1 cut(s) | 1593 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1244 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 48 |
| Bpu14I | TTCGAA | 3 cut(s) | 653, 1467, 1554 |
| BpuEI | CTTGAG | 1 cut(s) | 545 |
| BpuMI | CCSGG | 2 cut(s) | 153, 154 |
| BsaHI | GRCGYC | 2 cut(s) | 81, 96 |
| BsaI | GGTCTC | 1 cut(s) | 797 |
| BsaJI | CCNNGG | 4 cut(s) | 18, 152, 202, 1396 |
| Bse3DI | GCAATG | 1 cut(s) | 1161 |
| BseBI | CCWGG | 4 cut(s) | 146, 276, 1397, 1419 |
| BseDI | CCNNGG | 4 cut(s) | 18, 152, 202, 1396 |
| BseGI | GGATG | 4 cut(s) | 502, 577, 592, 1066 |
| BseMI | GCAATG | 1 cut(s) | 1161 |
| BseMII | CTCAG | 4 cut(s) | 62, 204, 1258, 1493 |
| BseXI | GCAGC | 5 cut(s) | 172, 988, 1180, 1516, 1552 |
| BseYI | CCCAGC | 2 cut(s) | 1321, 1620 |
| BsgI | GTGCAG | 2 cut(s) | 885, 1428 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1245, 1619 |
| BsiHKCI | CYCGRG | 1 cut(s) | 152 |
| BsiSI | CCGG | 1 cut(s) | 153 |
| BslFI | GGGAC | 2 cut(s) | 86, 901 |
| BsmAI | GTCTC | 3 cut(s) | 296, 573, 797 |
| BsmFI | GGGAC | 2 cut(s) | 86, 901 |
| Bso31I | GGTCTC | 1 cut(s) | 797 |
| BsoBI | CYCGRG | 1 cut(s) | 152 |
| Bsp119I | TTCGAA | 3 cut(s) | 653, 1467, 1554 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1245, 1619 |
| Bsp143I | GATC | 6 cut(s) | 738, 1012, 1135, 1234, 1304, 1475 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 48 |
| Bsp19I | CCATGG | 1 cut(s) | 202 |
| BspACI | CCGC | 3 cut(s) | 188, 465, 482 |
| BspCNI | CTCAG | 4 cut(s) | 61, 205, 1257, 1492 |
| BspLI | GGNNCC | 4 cut(s) | 24, 150, 1137, 1352 |
| BspMI | ACCTGC | 1 cut(s) | 1400 |
| BspPI | GGATC | 4 cut(s) | 1130, 1143, 1242, 1312 |
| BspT104I | TTCGAA | 3 cut(s) | 653, 1467, 1554 |
| BspTNI | GGTCTC | 1 cut(s) | 797 |
| BsrDI | GCAATG | 1 cut(s) | 1161 |
| BssECI | CCNNGG | 4 cut(s) | 18, 152, 202, 1396 |
| BssMI | GATC | 6 cut(s) | 738, 1012, 1135, 1234, 1304, 1475 |
| BssNI | GRCGYC | 2 cut(s) | 81, 96 |
| BssT1I | CCWWGG | 2 cut(s) | 18, 202 |
| Bst2UI | CCWGG | 4 cut(s) | 146, 276, 1397, 1419 |
| Bst4CI | ACNGT | 5 cut(s) | 221, 233, 413, 863, 1027 |
| Bst6I | CTCTTC | 2 cut(s) | 245, 500 |
| BstACI | GRCGYC | 2 cut(s) | 81, 96 |
| BstBI | TTCGAA | 3 cut(s) | 653, 1467, 1554 |
| BstC8I | GCNNGC | 4 cut(s) | 967, 1335, 1403, 1407 |
| BstDEI | CTNAG | 4 cut(s) | 48, 213, 1244, 1479 |
| BstDSI | CCRYGG | 1 cut(s) | 202 |
| BstEII | GGTNACC | 1 cut(s) | 1037 |
| BstF5I | GGATG | 4 cut(s) | 502, 577, 592, 1066 |
| BstKTI | GATC | 6 cut(s) | 741, 1015, 1138, 1237, 1307, 1478 |
| BstMAI | GTCTC | 3 cut(s) | 296, 573, 797 |
| BstMBI | GATC | 6 cut(s) | 738, 1012, 1135, 1234, 1304, 1475 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 44, 1538 |
| BstNI | CCWGG | 4 cut(s) | 146, 276, 1397, 1419 |
| BstNSI | RCATGY | 2 cut(s) | 969, 1405 |
| BstPI | GGTNACC | 1 cut(s) | 1037 |
| BstSCI | CCNGG | 6 cut(s) | 144, 151, 152, 274, 1395, 1417 |
| BstV1I | GCAGC | 5 cut(s) | 172, 988, 1180, 1516, 1552 |
| BstX2I | RGATCY | 2 cut(s) | 1135, 1475 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1333 |
| BstYI | RGATCY | 2 cut(s) | 1135, 1475 |
| BtgI | CCRYGG | 1 cut(s) | 202 |
| BtsCI | GGATG | 4 cut(s) | 502, 577, 592, 1066 |
| BtsI | GCAGTG | 1 cut(s) | 1344 |
| BtsIMutI | CAGTG | 3 cut(s) | 226, 868, 1344 |
| BveI | ACCTGC | 1 cut(s) | 1400 |
| Cac8I | GCNNGC | 4 cut(s) | 967, 1335, 1403, 1407 |
| Cfr13I | GGNCC | 1 cut(s) | 1350 |
| Cfr9I | CCCGGG | 1 cut(s) | 152 |
| CseI | GACGC | 3 cut(s) | 22, 89, 104 |
| CviAII | CATG | 6 cut(s) | 203, 848, 925, 966, 1256, 1402 |
| DdeI | CTNAG | 4 cut(s) | 48, 213, 1244, 1479 |
| DpnI | GATC | 6 cut(s) | 740, 1014, 1137, 1236, 1306, 1477 |
| DpnII | GATC | 6 cut(s) | 738, 1012, 1135, 1234, 1304, 1475 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 98 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 98 |
| Eam1104I | CTCTTC | 2 cut(s) | 245, 500 |
| EarI | CTCTTC | 2 cut(s) | 245, 500 |
| Ecl136II | GAGCTC | 2 cut(s) | 1243, 1617 |
| Eco130I | CCWWGG | 2 cut(s) | 18, 202 |
| Eco24I | GRGCYC | 2 cut(s) | 1245, 1619 |
| Eco31I | GGTCTC | 1 cut(s) | 797 |
| Eco47I | GGWCC | 1 cut(s) | 1350 |
| Eco53kI | GAGCTC | 2 cut(s) | 1243, 1617 |
| Eco57I | CTGAAG | 2 cut(s) | 159, 282 |
| Eco88I | CYCGRG | 1 cut(s) | 152 |
| Eco91I | GGTNACC | 1 cut(s) | 1037 |
| EcoICRI | GAGCTC | 2 cut(s) | 1243, 1617 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1350 |
| EcoO65I | GGTNACC | 1 cut(s) | 1037 |
| EcoRII | CCWGG | 4 cut(s) | 144, 274, 1395, 1417 |
| EcoT14I | CCWWGG | 2 cut(s) | 18, 202 |
| EcoT38I | GRGCYC | 2 cut(s) | 1245, 1619 |
| ErhI | CCWWGG | 2 cut(s) | 18, 202 |
| FaeI | CATG | 6 cut(s) | 206, 851, 928, 969, 1259, 1405 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1205, 1237 |
| FaqI | GGGAC | 2 cut(s) | 86, 901 |
| FatI | CATG | 6 cut(s) | 202, 847, 924, 965, 1255, 1401 |
| FbaI | TGATCA | 2 cut(s) | 738, 1012 |
| FblI | GTMKAC | 1 cut(s) | 1453 |
| Fnu4HI | GCNGC | 5 cut(s) | 186, 1002, 1194, 1530, 1566 |
| FokI | GGATG | 4 cut(s) | 509, 584, 599, 1073 |
| FriOI | GRGCYC | 2 cut(s) | 1245, 1619 |
| Fsp4HI | GCNGC | 5 cut(s) | 186, 1002, 1194, 1530, 1566 |
| FspBI | CTAG | 2 cut(s) | 87, 816 |
| GluI | GCNGC | 5 cut(s) | 186, 1002, 1194, 1530, 1566 |
| GsaI | CCCAGC | 2 cut(s) | 1325, 1624 |
| GsuI | CTGGAG | 1 cut(s) | 1593 |
| HapII | CCGG | 1 cut(s) | 153 |
| HgaI | GACGC | 3 cut(s) | 22, 89, 104 |
| Hin1I | GRCGYC | 2 cut(s) | 81, 96 |
| Hin1II | CATG | 6 cut(s) | 206, 851, 928, 969, 1259, 1405 |
| HincII | GTYRAC | 2 cut(s) | 199, 958 |
| HindII | GTYRAC | 2 cut(s) | 199, 958 |
| HindIII | AAGCTT | 3 cut(s) | 294, 680, 1226 |
| HpaI | GTTAAC | 1 cut(s) | 199 |
| HpaII | CCGG | 1 cut(s) | 153 |
| HphI | GGTGA | 7 cut(s) | 218, 236, 245, 250, 425, 479, 496 |
| Hpy166II | GTNNAC | 3 cut(s) | 199, 958, 1454 |
| Hpy188I | TCNGA | 6 cut(s) | 118, 214, 301, 887, 1154, 1482 |
| Hpy188III | TCNNGA | 9 cut(s) | 64, 133, 328, 724, 1238, 1302, 1473, 1610, 1639 |
| Hpy8I | GTNNAC | 3 cut(s) | 199, 958, 1454 |
| Hpy99I | CGWCG | 5 cut(s) | 38, 83, 95, 98, 671 |
| HpyCH4III | ACNGT | 5 cut(s) | 221, 233, 413, 863, 1027 |
| HpyCH4IV | ACGT | 4 cut(s) | 195, 1110, 1463, 1504 |
| HpyCH4V | TGCA | 7 cut(s) | 343, 596, 902, 1196, 1259, 1409, 1568 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 44, 1538 |
| HpyF3I | CTNAG | 4 cut(s) | 48, 213, 1244, 1479 |
| HpySE526I | ACGT | 4 cut(s) | 195, 1110, 1463, 1504 |
| Hsp92I | GRCGYC | 2 cut(s) | 81, 96 |
| Hsp92II | CATG | 6 cut(s) | 206, 851, 928, 969, 1259, 1405 |
| Ksp22I | TGATCA | 2 cut(s) | 738, 1012 |
| KspAI | GTTAAC | 1 cut(s) | 199 |
| Kzo9I | GATC | 6 cut(s) | 738, 1012, 1135, 1234, 1304, 1475 |
| LmnI | GCTCC | 6 cut(s) | 22, 175, 277, 824, 1240, 1622 |
| Lsp1109I | GCAGC | 5 cut(s) | 172, 988, 1180, 1516, 1552 |
| LweI | GCATC | 1 cut(s) | 1556 |
| MaeI | CTAG | 2 cut(s) | 87, 816 |
| MaeII | ACGT | 4 cut(s) | 195, 1110, 1463, 1504 |
| MaeIII | GTNAC | 1 cut(s) | 1037 |
| MalI | GATC | 6 cut(s) | 740, 1014, 1137, 1236, 1306, 1477 |
| MboI | GATC | 6 cut(s) | 738, 1012, 1135, 1234, 1304, 1475 |
| MflI | RGATCY | 2 cut(s) | 1135, 1475 |
| MhlI | GDGCHC | 2 cut(s) | 1245, 1619 |
| MluCI | AATT | 8 cut(s) | 355, 370, 706, 755, 1198, 1315, 1433, 1634 |
| MlyI | GAGTC | 2 cut(s) | 298, 779 |
| MmeI | TCCRAC | 3 cut(s) | 447, 556, 1131 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1119, 1634 |
| MseI | TTAA | 7 cut(s) | 198, 285, 386, 867, 1092, 1209, 1362 |
| MslI | CAYNNNNRTG | 2 cut(s) | 929, 951 |
| MspA1I | CMGCKG | 1 cut(s) | 638 |
| MspI | CCGG | 1 cut(s) | 153 |
| MspR9I | CCNGG | 6 cut(s) | 146, 153, 154, 276, 1397, 1419 |
| MvaI | CCWGG | 4 cut(s) | 146, 276, 1397, 1419 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 44, 1538 |
| NciI | CCSGG | 2 cut(s) | 153, 154 |
| NcoI | CCATGG | 1 cut(s) | 202 |
| NdeII | GATC | 6 cut(s) | 738, 1012, 1135, 1234, 1304, 1475 |
| NlaIII | CATG | 6 cut(s) | 206, 851, 928, 969, 1259, 1405 |
| NlaIV | GGNNCC | 4 cut(s) | 24, 150, 1137, 1352 |
| NspI | RCATGY | 2 cut(s) | 969, 1405 |
| NspV | TTCGAA | 3 cut(s) | 653, 1467, 1554 |
| PaeI | GCATGC | 2 cut(s) | 969, 1405 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 87 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1119, 1634 |
| PfeI | GAWTC | 8 cut(s) | 209, 781, 838, 896, 1103, 1268, 1291, 1469 |
| PflFI | GACNNNGTC | 1 cut(s) | 98 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 925 |
| PkrI | GCNGC | 5 cut(s) | 187, 1003, 1195, 1531, 1567 |
| PleI | GAGTC | 2 cut(s) | 298, 778 |
| PpsI | GAGTC | 2 cut(s) | 298, 778 |
| PpuMI | RGGWCCY | 1 cut(s) | 1350 |
| Psp124BI | GAGCTC | 2 cut(s) | 1245, 1619 |
| Psp1406I | AACGTT | 2 cut(s) | 195, 1110 |
| Psp5II | RGGWCCY | 1 cut(s) | 1350 |
| Psp6I | CCWGG | 4 cut(s) | 144, 274, 1395, 1417 |
| PspEI | GGTNACC | 1 cut(s) | 1037 |
| PspFI | CCCAGC | 2 cut(s) | 1321, 1620 |
| PspGI | CCWGG | 4 cut(s) | 144, 274, 1395, 1417 |
| PspN4I | GGNNCC | 4 cut(s) | 24, 150, 1137, 1352 |
| PspPI | GGNCC | 1 cut(s) | 1350 |
| PspPPI | RGGWCCY | 1 cut(s) | 1350 |
| PsuI | RGATCY | 2 cut(s) | 1135, 1475 |
| PsyI | GACNNNGTC | 1 cut(s) | 98 |
| PvuII | CAGCTG | 1 cut(s) | 638 |
| RseI | CAYNNNNRTG | 2 cut(s) | 929, 951 |
| SacI | GAGCTC | 2 cut(s) | 1245, 1619 |
| SaqAI | TTAA | 7 cut(s) | 198, 285, 386, 867, 1092, 1209, 1362 |
| SatI | GCNGC | 5 cut(s) | 186, 1002, 1194, 1530, 1566 |
| Sau3AI | GATC | 6 cut(s) | 738, 1012, 1135, 1234, 1304, 1475 |
| Sau96I | GGNCC | 1 cut(s) | 1350 |
| SchI | GAGTC | 2 cut(s) | 298, 779 |
| ScrFI | CCNGG | 6 cut(s) | 146, 153, 154, 276, 1397, 1419 |
| SduI | GDGCHC | 2 cut(s) | 1245, 1619 |
| SfaNI | GCATC | 1 cut(s) | 1556 |
| SfuI | TTCGAA | 3 cut(s) | 653, 1467, 1554 |
| SinI | GGWCC | 1 cut(s) | 1350 |
| SmaI | CCCGGG | 1 cut(s) | 154 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 929, 951 |
| SmlI | CTYRAG | 1 cut(s) | 524 |
| SmoI | CTYRAG | 1 cut(s) | 524 |
| SphI | GCATGC | 2 cut(s) | 969, 1405 |
| Sse9I | AATT | 8 cut(s) | 355, 370, 706, 755, 1198, 1315, 1433, 1634 |
| SsiI | CCGC | 3 cut(s) | 188, 465, 482 |
| SspMI | CTAG | 2 cut(s) | 87, 816 |
| SstI | GAGCTC | 2 cut(s) | 1245, 1619 |
| StyD4I | CCNGG | 6 cut(s) | 144, 151, 152, 274, 1395, 1417 |
| StyI | CCWWGG | 2 cut(s) | 18, 202 |
| TaaI | ACNGT | 5 cut(s) | 221, 233, 413, 863, 1027 |
| TaiI | ACGT | 4 cut(s) | 198, 1113, 1466, 1507 |
| TaqI | TCGA | 5 cut(s) | 653, 666, 1307, 1467, 1554 |
| TasI | AATT | 8 cut(s) | 355, 370, 706, 755, 1198, 1315, 1433, 1634 |
| TfiI | GAWTC | 8 cut(s) | 209, 781, 838, 896, 1103, 1268, 1291, 1469 |
| Tru1I | TTAA | 7 cut(s) | 198, 285, 386, 867, 1092, 1209, 1362 |
| Tru9I | TTAA | 7 cut(s) | 198, 285, 386, 867, 1092, 1209, 1362 |
| TscAI | CASTG | 3 cut(s) | 226, 868, 1344 |
| TseI | GCWGC | 5 cut(s) | 185, 1001, 1193, 1529, 1565 |
| TspDTI | ATGAA | 4 cut(s) | 303, 672, 1077, 1427 |
| TspGWI | ACGGA | 1 cut(s) | 941 |
| TspMI | CCCGGG | 1 cut(s) | 152 |
| TspRI | CASTG | 3 cut(s) | 226, 868, 1344 |
| Tth111I | GACNNNGTC | 1 cut(s) | 98 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 925 |
| VpaK11BI | GGWCC | 1 cut(s) | 1350 |
| XapI | RAATTY | 5 cut(s) | 706, 755, 1198, 1433, 1634 |
| XceI | RCATGY | 2 cut(s) | 969, 1405 |
| XmaI | CCCGGG | 1 cut(s) | 152 |
| XmiI | GTMKAC | 1 cut(s) | 1453 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1119, 1634 |
| XspI | CTAG | 2 cut(s) | 87, 816 |